Your job contains 1 sequence.
>psy12758
MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLPLP
PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL
NQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVR
KKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVA
TPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFS
ATFPKEIQ
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12758
(308 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0263231 - symbol:bel "belle" species:7227 "Drosoph... 533 2.1e-60 2
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al... 544 2.9e-60 2
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu... 528 4.8e-60 2
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"... 528 7.8e-60 2
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"... 528 7.8e-60 2
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"... 528 7.8e-60 2
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica... 528 7.8e-60 2
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"... 528 7.8e-60 2
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi... 525 1.6e-59 2
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po... 525 2.0e-59 2
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-... 528 3.3e-59 2
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 527 3.3e-59 2
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"... 525 4.2e-59 2
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica... 525 6.9e-59 2
RGD|2314437 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box po... 517 6.9e-57 2
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"... 517 1.1e-56 2
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo... 513 1.1e-56 2
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"... 525 1.4e-56 2
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"... 529 2.3e-56 2
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"... 528 2.9e-56 2
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ... 489 1.3e-51 2
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ... 487 1.3e-51 2
SGD|S000005730 - symbol:DED1 "ATP-dependent DEAD (Asp-Glu... 478 3.3e-51 2
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme... 491 2.9e-50 2
POMBASE|SPCC1795.11 - symbol:sum3 "translation initiation... 441 1.8e-46 2
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 416 2.0e-43 2
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 411 3.2e-43 2
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 423 1.9e-42 2
DICTYBASE|DDB_G0283661 - symbol:ddx3 "DEAD/DEAH box helic... 418 7.6e-42 2
WB|WBGene00002244 - symbol:laf-1 species:6239 "Caenorhabd... 423 1.7e-41 2
UNIPROTKB|Q0C354 - symbol:rhlE "ATP-dependent RNA helicas... 274 4.4e-41 2
CGD|CAL0005460 - symbol:DBP3 species:5476 "Candida albica... 269 1.4e-39 2
UNIPROTKB|Q90ZF6 - symbol:olvas "VASA" species:8090 "Oryz... 408 8.1e-38 1
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd... 405 3.0e-37 1
ZFIN|ZDB-GENE-990415-272 - symbol:vasa "vasa homolog" spe... 397 3.3e-36 1
WB|WBGene00019245 - symbol:sacy-1 species:6239 "Caenorhab... 276 1.4e-35 2
GENEDB_PFALCIPARUM|PF08_0096 - symbol:PF08_0096 "RNA heli... 328 1.4e-34 3
UNIPROTKB|Q8IAU1 - symbol:PF08_0096 "RNA helicase, putati... 328 1.4e-34 3
UNIPROTKB|Q91372 - symbol:ddx4 "Probable ATP-dependent RN... 371 2.1e-33 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 364 4.0e-33 1
UNIPROTKB|F1NL04 - symbol:DDX4 "Uncharacterized protein" ... 361 6.4e-33 1
UNIPROTKB|D6RCM4 - symbol:DDX4 "Probable ATP-dependent RN... 358 8.5e-33 1
UNIPROTKB|F1N991 - symbol:DDX4 "Uncharacterized protein" ... 361 9.6e-33 1
UNIPROTKB|Q4R5S7 - symbol:DDX4 "Probable ATP-dependent RN... 362 2.3e-32 1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 347 2.5e-32 2
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 347 2.5e-32 2
GENEDB_PFALCIPARUM|PFL1310c - symbol:PFL1310c "ATP-depend... 268 2.6e-32 2
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 347 2.6e-32 2
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 347 2.6e-32 2
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN... 360 3.7e-32 1
UNIPROTKB|D6RDK4 - symbol:DDX4 "Probable ATP-dependent RN... 358 5.6e-32 1
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 353 5.8e-32 1
UNIPROTKB|Q9NQI0 - symbol:DDX4 "Probable ATP-dependent RN... 358 6.1e-32 1
UNIPROTKB|Q6GWX0 - symbol:DDX4 "Probable ATP-dependent RN... 357 7.8e-32 1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 356 9.8e-32 1
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 351 1.0e-31 1
UNIPROTKB|F1MYC6 - symbol:DDX4 "Probable ATP-dependent RN... 356 1.0e-31 1
UNIPROTKB|Q5W5U4 - symbol:DDX4 "Probable ATP-dependent RN... 356 1.0e-31 1
UNIPROTKB|B2C6E9 - symbol:B2C6E9 "VASA" species:9337 "Tri... 355 1.2e-31 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 347 1.3e-31 1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 335 1.5e-31 2
UNIPROTKB|E2RMU5 - symbol:DDX4 "Uncharacterized protein" ... 354 1.7e-31 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 350 2.1e-31 1
UNIPROTKB|D4ADV9 - symbol:Ddx4 "Probable ATP-dependent RN... 351 2.8e-31 1
MGI|MGI:102670 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box ... 351 3.2e-31 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 349 3.3e-31 1
RGD|1308793 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box pol... 351 3.3e-31 1
UNIPROTKB|Q64060 - symbol:Ddx4 "Probable ATP-dependent RN... 351 3.3e-31 1
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 347 4.7e-31 1
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 342 4.7e-31 1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 347 5.0e-31 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 345 5.0e-31 1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 347 6.7e-31 1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 347 6.7e-31 1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 347 6.7e-31 1
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 347 6.8e-31 1
DICTYBASE|DDB_G0270396 - symbol:ddx49 "DEAD/DEAH box heli... 223 1.3e-30 2
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 344 1.6e-30 1
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 341 1.6e-30 1
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 346 1.7e-30 1
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 345 1.9e-30 1
UNIPROTKB|J3KRZ1 - symbol:DDX5 "Probable ATP-dependent RN... 334 3.0e-30 1
UNIPROTKB|Q9H0S4 - symbol:DDX47 "Probable ATP-dependent R... 217 6.6e-30 2
UNIPROTKB|B4DLW8 - symbol:DDX5 "Probable ATP-dependent RN... 334 7.3e-30 1
TIGR_CMR|SO_4034 - symbol:SO_4034 "ATP-dependent RNA heli... 229 1.2e-29 2
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 334 1.4e-29 1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 334 1.4e-29 1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 334 1.4e-29 1
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 334 1.4e-29 1
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 334 1.4e-29 1
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 334 1.4e-29 1
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 334 1.4e-29 1
UNIPROTKB|E2RN03 - symbol:DDX47 "Uncharacterized protein"... 216 1.5e-29 2
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 334 2.0e-29 1
UNIPROTKB|I3L976 - symbol:DDX47 "Uncharacterized protein"... 214 2.5e-29 2
UNIPROTKB|Q29S22 - symbol:DDX47 "Probable ATP-dependent R... 214 2.5e-29 2
MGI|MGI:1915005 - symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) bo... 214 3.1e-29 2
UNIPROTKB|G3V727 - symbol:Ddx47 "Protein Ddx47" species:1... 214 3.1e-29 2
UNIPROTKB|Q5ZLB0 - symbol:DDX47 "Uncharacterized protein"... 221 3.3e-29 2
TIGR_CMR|VC_2564 - symbol:VC_2564 "ATP-dependent RNA heli... 241 5.1e-29 2
WARNING: Descriptions of 731 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 533 (192.7 bits), Expect = 2.1e-60, Sum P(2) = 2.1e-60
Identities = 100/129 (77%), Positives = 116/129 (89%)
Query: 180 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLV 239
R+K +PLGLVLAPTRELATQI++EAKKFAYRS++RP V+YGG+N +QMR+LDRGCHL+V
Sbjct: 374 RRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIV 433
Query: 240 ATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMF 299
ATPGRL DM+ RGK+GL N RFLVLDEADRMLDMGFEPQIR IV++ MP TG RQTLMF
Sbjct: 434 ATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMF 493
Query: 300 SATFPKEIQ 308
SATFPK+IQ
Sbjct: 494 SATFPKQIQ 502
Score = 479 (173.7 bits), Expect = 4.0e-54, Sum P(2) = 4.0e-54
Identities = 93/124 (75%), Positives = 110/124 (88%)
Query: 59 LPPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+PP FDD+Q+TEII NN+ALARYDKPTPVQK+AIP+II+GRD+MACAQTGSGKTAAF
Sbjct: 290 VPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAF 349
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
LVPILNQMYE G +P P + R Y SR+K +PLGLVLAPTRELATQI++EAKKFAYRS++R
Sbjct: 350 LVPILNQMYELGHVPPPQSTRQY-SRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSRMR 408
Query: 176 PCVV 179
P V+
Sbjct: 409 PAVL 412
Score = 110 (43.8 bits), Expect = 2.1e-60, Sum P(2) = 2.1e-60
Identities = 30/61 (49%), Positives = 33/61 (54%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSA----------KKESAPGSNPRVYVPPHLRNQPSGGRN 50
MS NQNGTGLEQQ+AGLDL+ K S VYVPPHLR GG N
Sbjct: 1 MSNAINQNGTGLEQQVAGLDLNGGSADYSGPITSKTSTNSVTGGVYVPPHLRG--GGGNN 58
Query: 51 S 51
+
Sbjct: 59 N 59
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 544 (196.6 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 101/130 (77%), Positives = 119/130 (91%)
Query: 179 VRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLL 238
VR+K +P+ LVLAPTRELA QIYDEA+KFAYRS++RPCVVYGG+++G Q+RDL+RGCHLL
Sbjct: 309 VRRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLL 368
Query: 239 VATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLM 298
VATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGFEPQIR IV+++ MP G RQT+M
Sbjct: 369 VATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMM 428
Query: 299 FSATFPKEIQ 308
FSATFPKEIQ
Sbjct: 429 FSATFPKEIQ 438
Score = 383 (139.9 bits), Expect = 7.9e-42, Sum P(2) = 7.9e-42
Identities = 78/124 (62%), Positives = 94/124 (75%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D+ M EII NI L+RY +PTPVQKYAIP+I + RD+MACAQTGSGKTAAFL+P+L+Q
Sbjct: 225 FHDVDMGEIIMGNITLSRYTRPTPVQKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQ 284
Query: 123 MYERGP---LPTPPAG----RGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
+Y GP L A G R+K +P+ LVLAPTRELA QIYDEA+KFAYRS++R
Sbjct: 285 IYSEGPGEALQATKASTQQENGKYVRRKQYPISLVLAPTRELALQIYDEARKFAYRSRVR 344
Query: 176 PCVV 179
PCVV
Sbjct: 345 PCVV 348
Score = 91 (37.1 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRNS 51
MS+ GL+QQLA LDL++ G+ R Y+PPHLRN+ + +S
Sbjct: 1 MSHVVVDGSHGLDQQLAVLDLNSADGQGVGTGRR-YIPPHLRNKDASKNDS 50
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 528 (190.9 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 102/153 (66%), Positives = 126/153 (82%)
Query: 157 LATQIYDEAKKFAYRSQLRPCVV-RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 215
+ +QIY + A R+ R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RP
Sbjct: 237 ILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRP 296
Query: 216 CVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGF 275
CVVYGG+++G Q+RDL+RGCHLLVATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGF
Sbjct: 297 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 356
Query: 276 EPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
EPQIR IV+++ MP G R T+MFSATFPKEIQ
Sbjct: 357 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 389
Score = 378 (138.1 bits), Expect = 5.4e-43, Sum P(2) = 5.4e-43
Identities = 77/125 (61%), Positives = 95/125 (76%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F D++M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 175 PPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 234
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++
Sbjct: 235 LPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 294
Query: 175 RPCVV 179
RPCVV
Sbjct: 295 RPCVV 299
Score = 105 (42.0 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRV--YVPPHLRNQ 44
MS+ + ++ GL+QQLAGLDL+++ + GS Y+PPHLRN+
Sbjct: 1 MSHVAEEDELGLDQQLAGLDLTSRDSQSGGSTASKGRYIPPHLRNR 46
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 528 (190.9 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 102/153 (66%), Positives = 126/153 (82%)
Query: 157 LATQIYDEAKKFAYRSQLRPCVV-RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 215
+ +QIY + A R+ R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RP
Sbjct: 237 ILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRP 296
Query: 216 CVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGF 275
CVVYGG+++G Q+RDL+RGCHLLVATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGF
Sbjct: 297 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 356
Query: 276 EPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
EPQIR IV+++ MP G R T+MFSATFPKEIQ
Sbjct: 357 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 389
Score = 379 (138.5 bits), Expect = 6.9e-43, Sum P(2) = 6.9e-43
Identities = 77/125 (61%), Positives = 95/125 (76%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F D++M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 175 PPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 234
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++
Sbjct: 235 LPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 294
Query: 175 RPCVV 179
RPCVV
Sbjct: 295 RPCVV 299
Score = 103 (41.3 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRV--YVPPHLRNQ 44
MS+ + +N GL+QQ AGLDL++ + GS Y+PPHLRN+
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 528 (190.9 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 102/153 (66%), Positives = 126/153 (82%)
Query: 157 LATQIYDEAKKFAYRSQLRPCVV-RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 215
+ +QIY + A R+ R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RP
Sbjct: 280 ILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRP 339
Query: 216 CVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGF 275
CVVYGG+++G Q+RDL+RGCHLLVATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGF
Sbjct: 340 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 399
Query: 276 EPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
EPQIR IV+++ MP G R T+MFSATFPKEIQ
Sbjct: 400 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 432
Score = 379 (138.5 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 77/125 (61%), Positives = 95/125 (76%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F D++M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 218 PPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 277
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++
Sbjct: 278 LPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 337
Query: 175 RPCVV 179
RPCVV
Sbjct: 338 RPCVV 342
Score = 103 (41.3 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRV--YVPPHLRNQ 44
MS+ + +N GL+QQ AGLDL++ + GS Y+PPHLRN+
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 528 (190.9 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 102/153 (66%), Positives = 126/153 (82%)
Query: 157 LATQIYDEAKKFAYRSQLRPCVV-RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 215
+ +QIY + A R+ R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RP
Sbjct: 238 ILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRP 297
Query: 216 CVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGF 275
CVVYGG+++G Q+RDL+RGCHLLVATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGF
Sbjct: 298 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 357
Query: 276 EPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
EPQIR IV+++ MP G R T+MFSATFPKEIQ
Sbjct: 358 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 390
Score = 379 (138.5 bits), Expect = 7.0e-43, Sum P(2) = 7.0e-43
Identities = 77/125 (61%), Positives = 95/125 (76%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F D++M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 176 PPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 235
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++
Sbjct: 236 LPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 295
Query: 175 RPCVV 179
RPCVV
Sbjct: 296 RPCVV 300
Score = 103 (41.3 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRV--YVPPHLRNQ 44
MS+ + +N GL+QQ AGLDL++ + GS Y+PPHLRN+
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 528 (190.9 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 102/153 (66%), Positives = 126/153 (82%)
Query: 157 LATQIYDEAKKFAYRSQLRPCVV-RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 215
+ +QIY + A R+ R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RP
Sbjct: 238 ILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRP 297
Query: 216 CVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGF 275
CVVYGG+++G Q+RDL+RGCHLLVATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGF
Sbjct: 298 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 357
Query: 276 EPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
EPQIR IV+++ MP G R T+MFSATFPKEIQ
Sbjct: 358 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 390
Score = 379 (138.5 bits), Expect = 7.0e-43, Sum P(2) = 7.0e-43
Identities = 77/125 (61%), Positives = 95/125 (76%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F D++M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 176 PPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 235
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++
Sbjct: 236 LPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 295
Query: 175 RPCVV 179
RPCVV
Sbjct: 296 RPCVV 300
Score = 103 (41.3 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRV--YVPPHLRNQ 44
MS+ + +N GL+QQ AGLDL++ + GS Y+PPHLRN+
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 528 (190.9 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 102/153 (66%), Positives = 126/153 (82%)
Query: 157 LATQIYDEAKKFAYRSQLRPCVV-RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 215
+ +QIY + A R+ R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RP
Sbjct: 238 ILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRP 297
Query: 216 CVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGF 275
CVVYGG+++G Q+RDL+RGCHLLVATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGF
Sbjct: 298 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 357
Query: 276 EPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
EPQIR IV+++ MP G R T+MFSATFPKEIQ
Sbjct: 358 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 390
Score = 379 (138.5 bits), Expect = 6.9e-43, Sum P(2) = 6.9e-43
Identities = 77/125 (61%), Positives = 95/125 (76%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F D++M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 176 PPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 235
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++
Sbjct: 236 LPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 295
Query: 175 RPCVV 179
RPCVV
Sbjct: 296 RPCVV 300
Score = 103 (41.3 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRV--YVPPHLRNQ 44
MS+ + +N GL+QQ AGLDL++ + GS Y+PPHLRN+
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 525 (189.9 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 102/153 (66%), Positives = 125/153 (81%)
Query: 157 LATQIYDEAKKFAYRSQLRPCVV-RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 215
+ +QIY + A R+ R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RP
Sbjct: 238 ILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRP 297
Query: 216 CVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGF 275
CVVYGG+ +G Q+RDL+RGCHLLVATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGF
Sbjct: 298 CVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 357
Query: 276 EPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
EPQIR IV+++ MP G R T+MFSATFPKEIQ
Sbjct: 358 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 390
Score = 378 (138.1 bits), Expect = 9.1e-43, Sum P(2) = 9.1e-43
Identities = 77/125 (61%), Positives = 95/125 (76%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F D++M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 176 PPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 235
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++
Sbjct: 236 LPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 295
Query: 175 RPCVV 179
RPCVV
Sbjct: 296 RPCVV 300
Score = 103 (41.3 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRV--YVPPHLRNQ 44
MS+ + +N GL+QQ AGLDL++ + GS Y+PPHLRN+
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNR 46
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 525 (189.9 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 102/153 (66%), Positives = 125/153 (81%)
Query: 157 LATQIYDEAKKFAYRSQLRPCVV-RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 215
+ +QIY + A R+ R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RP
Sbjct: 238 ILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRP 297
Query: 216 CVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGF 275
CVVYGG+ +G Q+RDL+RGCHLLVATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGF
Sbjct: 298 CVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 357
Query: 276 EPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
EPQIR IV+++ MP G R T+MFSATFPKEIQ
Sbjct: 358 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 390
Score = 378 (138.1 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 77/125 (61%), Positives = 95/125 (76%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F D++M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 176 PPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 235
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++
Sbjct: 236 LPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 295
Query: 175 RPCVV 179
RPCVV
Sbjct: 296 RPCVV 300
Score = 102 (41.0 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRV--YVPPHLRNQ 44
MS+ + +N GL+QQ AGLDL++ GS Y+PPHLRN+
Sbjct: 1 MSHVAVENALGLDQQFAGLDLNSSDNQTGGSTASKGRYIPPHLRNR 46
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 528 (190.9 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 102/153 (66%), Positives = 126/153 (82%)
Query: 157 LATQIYDEAKKFAYRSQLRPCVV-RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 215
+ +QIY + A R+ R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RP
Sbjct: 236 ILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRP 295
Query: 216 CVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGF 275
CVVYGG+++G Q+RDL+RGCHLLVATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGF
Sbjct: 296 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 355
Query: 276 EPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
EPQIR IV+++ MP G R T+MFSATFPKEIQ
Sbjct: 356 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 388
Score = 378 (138.1 bits), Expect = 3.7e-42, Sum P(2) = 3.7e-42
Identities = 77/125 (61%), Positives = 95/125 (76%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F D++M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 174 PPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 233
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++
Sbjct: 234 LPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 293
Query: 175 RPCVV 179
RPCVV
Sbjct: 294 RPCVV 298
Score = 97 (39.2 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSA--KKESAPGSNPRVYVPPHLRNQ 44
MS+ + ++ GL+QQLAGLDL++ + A ++ Y+PPHLRN+
Sbjct: 1 MSHVAEEDELGLDQQLAGLDLTSPDSQSGASTASKGRYIPPHLRNR 46
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 527 (190.6 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 98/129 (75%), Positives = 116/129 (89%)
Query: 180 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLV 239
R+K +P+ LVLAPTRELA QIYDEA+KF+YRS +RPCVVYGG+++G Q+RDL+RGCHLLV
Sbjct: 294 RRKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLV 353
Query: 240 ATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMF 299
ATPGRL+DM+ERGKIGL C +LVLDEADRMLDMGFEPQIR IV+++ MP G RQT+MF
Sbjct: 354 ATPGRLLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMF 413
Query: 300 SATFPKEIQ 308
SATFPKEIQ
Sbjct: 414 SATFPKEIQ 422
Score = 379 (138.5 bits), Expect = 3.2e-42, Sum P(2) = 3.2e-42
Identities = 78/129 (60%), Positives = 97/129 (75%)
Query: 58 PLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P +F D++M EII NI L+RY +PTPVQK+AIP+I S RD+MACAQTGSGKTAAFL
Sbjct: 204 PQPIDRFHDLEMGEIIMGNINLSRYTRPTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFL 263
Query: 117 VPILNQMYERGPLPTPPAGR------GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAY 170
+P+L+Q+Y GP A + G R+K +P+ LVLAPTRELA QIYDEA+KF+Y
Sbjct: 264 LPVLSQIYTDGPGEALQAAKNSAQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSY 323
Query: 171 RSQLRPCVV 179
RS +RPCVV
Sbjct: 324 RSHVRPCVV 332
Score = 98 (39.6 bits), Expect = 3.3e-59, Sum P(2) = 3.3e-59
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQ 44
MS+ + +N GL+QQLA LDLS+ G R Y+PPHLRN+
Sbjct: 1 MSHVAVENVHGLDQQLAALDLSSA--DVQGVTGRRYIPPHLRNK 42
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 525 (189.9 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 97/129 (75%), Positives = 117/129 (90%)
Query: 180 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLV 239
R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RPCVVYGG+++G Q+RDL+RGCHLLV
Sbjct: 263 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 322
Query: 240 ATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMF 299
ATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGFEPQIR IV+++ MP G R T+MF
Sbjct: 323 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 382
Query: 300 SATFPKEIQ 308
SATFPKEIQ
Sbjct: 383 SATFPKEIQ 391
Score = 378 (138.1 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 75/119 (63%), Positives = 93/119 (78%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D++M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL+PIL+Q
Sbjct: 183 FSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQ 242
Query: 123 MYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RPCVV
Sbjct: 243 IYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV 301
Score = 99 (39.9 bits), Expect = 4.2e-59, Sum P(2) = 4.2e-59
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 1 MSYESNQNGTGLEQQLAGLDL-SAKKESAPGSNPRV--YVPPHLRNQ 44
MS+ +N GL+QQ AGLDL S+ +S GS Y+PPHLRN+
Sbjct: 1 MSHVVVENALGLDQQFAGLDLNSSDNQSGGGSTASKGRYIPPHLRNR 47
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 525 (189.9 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 97/129 (75%), Positives = 117/129 (90%)
Query: 180 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLV 239
R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RPCVVYGG+++G Q+RDL+RGCHLLV
Sbjct: 260 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 319
Query: 240 ATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMF 299
ATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGFEPQIR IV+++ MP G R T+MF
Sbjct: 320 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 379
Query: 300 SATFPKEIQ 308
SATFPKEIQ
Sbjct: 380 SATFPKEIQ 388
Score = 378 (138.1 bits), Expect = 3.8e-42, Sum P(2) = 3.8e-42
Identities = 78/125 (62%), Positives = 94/125 (75%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F DI M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 174 PPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFL 233
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++
Sbjct: 234 LPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 293
Query: 175 RPCVV 179
RPCVV
Sbjct: 294 RPCVV 298
Score = 97 (39.2 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRV--YVPPHLRN-QPSGGRNSTDT 54
MS+ +N L+QQLA LDL+++K+S S Y+PPHLRN + S G + D+
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDS 57
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 517 (187.1 bits), Expect = 6.9e-57, Sum P(2) = 6.9e-57
Identities = 124/271 (45%), Positives = 165/271 (60%)
Query: 47 GGRNSTDTFLLPLPPQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQ 106
G ++ D + PLPP + ++ E+ + A ++K IPV +G + +
Sbjct: 121 GDKSDEDDWSKPLPPS-ERLEQ-ELFSGGNAGINFEKYDD-----IPVEATGNNCPPHIE 173
Query: 107 TGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPL--------GLVLAPTRELA 158
S ++ + N R PTP P K+ L G A +
Sbjct: 174 NFSDVEMGEII-MGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGCTAAFLLPIL 232
Query: 159 TQIYDEAKKFAYRSQLRPCVV-RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCV 217
+QIY + A ++ R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RPCV
Sbjct: 233 SQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCV 292
Query: 218 VYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEP 277
VYGG++ Q+RDL+RGCHLLVATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGFEP
Sbjct: 293 VYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEP 352
Query: 278 QIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
QIR IV+++ MP G R T+MFSATFPKEIQ
Sbjct: 353 QIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 383
Score = 86 (35.3 bits), Expect = 6.9e-57, Sum P(2) = 6.9e-57
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 7 QNGTGLEQQLAGLDLSAKKESAPGSNPRV--YVPPHLRNQ 44
+N GL+QQ AGLD+++ ++ S Y+PPHLRN+
Sbjct: 4 ENTVGLDQQFAGLDMNSDNQNGGVSTESKGRYIPPHLRNR 43
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 517 (187.1 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 95/129 (73%), Positives = 116/129 (89%)
Query: 180 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLV 239
R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++ PCVVYGG+++G Q+RDL+RGCHLLV
Sbjct: 262 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLV 321
Query: 240 ATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMF 299
ATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGFEPQIR I++++ MP G R T+MF
Sbjct: 322 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMF 381
Query: 300 SATFPKEIQ 308
SATFPKEIQ
Sbjct: 382 SATFPKEIQ 390
Score = 369 (135.0 bits), Expect = 9.1e-40, Sum P(2) = 9.1e-40
Identities = 76/125 (60%), Positives = 93/125 (74%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F D+ M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 176 PPHIESFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 235
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++
Sbjct: 236 LPILSQIYTDGPGEALKAVKESGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 295
Query: 175 RPCVV 179
PCVV
Sbjct: 296 LPCVV 300
Score = 84 (34.6 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSA-KKESAPGSNPRV--YVPPHLRNQ 44
MS+E+ +N ++QQLA L+L++ +S GS Y+PPHLRN+
Sbjct: 1 MSHEAVKNVQEVDQQLADLNLNSDNNQSGGGSTASKGRYIPPHLRNR 47
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 513 (185.6 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 96/129 (74%), Positives = 115/129 (89%)
Query: 180 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLV 239
R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RPCVVYGG++ Q+RDL+RGCHLLV
Sbjct: 261 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLV 320
Query: 240 ATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMF 299
ATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGFEPQIR IV+++ MP G R T+MF
Sbjct: 321 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 380
Query: 300 SATFPKEIQ 308
SATFPKEIQ
Sbjct: 381 SATFPKEIQ 389
Score = 380 (138.8 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 78/125 (62%), Positives = 95/125 (76%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F DI+M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 175 PPHIENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 234
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++
Sbjct: 235 LPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 294
Query: 175 RPCVV 179
RPCVV
Sbjct: 295 RPCVV 299
Score = 88 (36.0 bits), Expect = 1.1e-56, Sum P(2) = 1.1e-56
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRV---YVPPHLRNQ 44
MS + ++ GL+QQ GLDL + G N Y+PPHLRN+
Sbjct: 1 MSQVAAESTAGLDQQFVGLDLKSSDNQNGGGNTESKGRYIPPHLRNR 47
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 525 (189.9 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 97/129 (75%), Positives = 117/129 (90%)
Query: 180 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLV 239
R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++RPCVVYGG+++G Q+RDL+RGCHLLV
Sbjct: 257 RRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 316
Query: 240 ATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMF 299
ATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGFEPQIR IV+++ MP G R T+MF
Sbjct: 317 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 376
Query: 300 SATFPKEIQ 308
SATFPKEIQ
Sbjct: 377 SATFPKEIQ 385
Score = 378 (138.1 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 78/125 (62%), Positives = 94/125 (75%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F DI M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 171 PPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFL 230
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KF+YRS++
Sbjct: 231 LPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRV 290
Query: 175 RPCVV 179
RPCVV
Sbjct: 291 RPCVV 295
Score = 75 (31.5 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 15 QLAGLDLSAKKESAPGSNPRV--YVPPHLRN-QPSGGRNSTDT 54
+LA LDL+++K+S S Y+PPHLRN + S G + D+
Sbjct: 12 KLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDS 54
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 529 (191.3 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 103/153 (67%), Positives = 126/153 (82%)
Query: 157 LATQIYDEAKKFAYRSQLRPCVV-RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 215
+ +QIY + A R+ R+K +P+ LVLAPTRELA QIY+EA+KFAYRS++RP
Sbjct: 216 ILSQIYADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRP 275
Query: 216 CVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGF 275
CVVYGG+++G Q+RDL+RGCHLLVATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGF
Sbjct: 276 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 335
Query: 276 EPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
EPQIR IV+++ MP G R T+MFSATFPKEIQ
Sbjct: 336 EPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 368
Score = 379 (138.5 bits), Expect = 1.8e-39, Sum P(2) = 1.8e-39
Identities = 78/125 (62%), Positives = 94/125 (75%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F D+ M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 154 PPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 213
Query: 117 VPILNQMYERGPLPTPPAGR--GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+PIL+Q+Y GP A + G R+K +P+ LVLAPTRELA QIY+EA+KFAYRS++
Sbjct: 214 LPILSQIYADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRV 273
Query: 175 RPCVV 179
RPCVV
Sbjct: 274 RPCVV 278
Score = 69 (29.3 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 15 QLAGLDLSAKKESAPGS--NPRVYVPPHLRNQ 44
Q +GLDL++ + GS + Y+PPHLRN+
Sbjct: 1 QFSGLDLNSSDSQSEGSATSKGRYIPPHLRNR 32
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 528 (190.9 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 98/129 (75%), Positives = 117/129 (90%)
Query: 180 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLV 239
R+K +P+ LVLAPTRELA QIY+EA+KFAYRS++RPCVVYGG+++G Q+RDL+RGCHLLV
Sbjct: 239 RRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLV 298
Query: 240 ATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMF 299
ATPGRLVDM+ERGKIGL C++LVLDEADRMLDMGFEPQIR IV+++ MP G R T+MF
Sbjct: 299 ATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMF 358
Query: 300 SATFPKEIQ 308
SATFPKEIQ
Sbjct: 359 SATFPKEIQ 367
Score = 385 (140.6 bits), Expect = 3.7e-40, Sum P(2) = 3.7e-40
Identities = 79/126 (62%), Positives = 94/126 (74%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F D+ M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 152 PPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFL 211
Query: 117 VPILNQMYERGP---LPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ 173
+PIL+Q+Y GP L A G R+K +P+ LVLAPTRELA QIY+EA+KFAYRS+
Sbjct: 212 LPILSQIYADGPGDALRAMKATNGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSR 271
Query: 174 LRPCVV 179
+RPCVV
Sbjct: 272 VRPCVV 277
Score = 69 (29.3 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 15 QLAGLDLSAKKESAPGS--NPRVYVPPHLRNQ 44
Q +GLDL++ + GS + Y+PPHLRN+
Sbjct: 1 QFSGLDLNSSDSQSEGSATSKGRYIPPHLRNR 32
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 489 (177.2 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 92/127 (72%), Positives = 111/127 (87%)
Query: 182 KVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVAT 241
KV+P LV+APTREL +QIY+E+KKF+YRS +R CVVYGG+++G QMR++DRGC LLVAT
Sbjct: 267 KVYPTILVMAPTRELVSQIYEESKKFSYRSWVRACVVYGGADIGQQMRNMDRGCDLLVAT 326
Query: 242 PGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
PGRL D+L+RGK+ LAN R+LVLDEADRMLDMGFEPQIR IV+E MP DRQTLMFSA
Sbjct: 327 PGRLKDLLDRGKVSLANIRYLVLDEADRMLDMGFEPQIRYIVEECDMPAVKDRQTLMFSA 386
Query: 302 TFPKEIQ 308
TFP++IQ
Sbjct: 387 TFPRDIQ 393
Score = 355 (130.0 bits), Expect = 4.7e-36, Sum P(2) = 4.7e-36
Identities = 66/124 (53%), Positives = 91/124 (73%)
Query: 57 LPLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P F + E++ NI L+R+ KPTPVQKY++P++ +GRD+MACAQTGSGKT F
Sbjct: 181 VPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGF 240
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
L P+L++ Y +GP P P + + S K V+P LV+APTREL +QIY+E+KKF+YRS +R
Sbjct: 241 LFPVLSESYMKGPAPVPESNGAFSSHK-VYPTILVMAPTRELVSQIYEESKKFSYRSWVR 299
Query: 176 PCVV 179
CVV
Sbjct: 300 ACVV 303
Score = 64 (27.6 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 11/16 (68%), Positives = 12/16 (75%)
Query: 36 YVPPHLRNQPSGGRNS 51
YVPPHLRN+ GG S
Sbjct: 33 YVPPHLRNRQGGGNQS 48
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 487 (176.5 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 93/128 (72%), Positives = 111/128 (86%)
Query: 181 KKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVA 240
+K +P LVLAPTRELATQI++EA+KF YRS +RPCVVYGG+ +G+QMR++DRGC LLVA
Sbjct: 234 RKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVA 293
Query: 241 TPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFS 300
TPGRL D+LERGK+ LAN ++LVLDEADRMLDMGFEPQIR IV+E MP +RQTLMFS
Sbjct: 294 TPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFS 353
Query: 301 ATFPKEIQ 308
ATFP +IQ
Sbjct: 354 ATFPVDIQ 361
Score = 357 (130.7 bits), Expect = 8.9e-37, Sum P(2) = 8.9e-37
Identities = 66/117 (56%), Positives = 85/117 (72%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F + E++ NI LA + KPTPVQKY+IP++ GRD+MACAQTGSGKT FL P+ +
Sbjct: 156 FSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTE 215
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
++ GP P P + + SRK +P LVLAPTRELATQI++EA+KF YRS +RPCVV
Sbjct: 216 LFRSGPSPVPEKAQSFYSRKG-YPSALVLAPTRELATQIFEEARKFTYRSWVRPCVV 271
Score = 66 (28.3 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 12 LEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQ--PSGGRNS 51
L Q+++ L ++ KE+ G YVPPHLR++ PS R++
Sbjct: 4 LPQKVSNLSIN-NKENGGGGGKSSYVPPHLRSRGKPSFERST 44
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 478 (173.3 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 89/129 (68%), Positives = 111/129 (86%)
Query: 180 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLV 239
++K +P +++APTRELATQI+DEAKKF YRS ++ CVVYGGS +G+Q+R+++RGC LLV
Sbjct: 221 QRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLV 280
Query: 240 ATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMF 299
ATPGRL D+LERGKI LAN ++LVLDEADRMLDMGFEPQIR IV++ M G+RQTLMF
Sbjct: 281 ATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMF 340
Query: 300 SATFPKEIQ 308
SATFP +IQ
Sbjct: 341 SATFPADIQ 349
Score = 349 (127.9 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 64/124 (51%), Positives = 92/124 (74%)
Query: 57 LPLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P +F + ++ NI LAR+ KPTPVQKY++P++ +GRD+MACAQTGSGKT F
Sbjct: 137 VPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGF 196
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
L P+L++ ++ GP P P + +G ++K +P +++APTRELATQI+DEAKKF YRS ++
Sbjct: 197 LFPVLSESFKTGPSPQPES-QGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVK 255
Query: 176 PCVV 179
CVV
Sbjct: 256 ACVV 259
Score = 71 (30.1 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 16 LAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTF 55
+A L + S +N YVPPHLR +P RN++ +
Sbjct: 1 MAELSEQVQNLSINDNNENGYVPPHLRGKPRSARNNSSNY 40
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 491 (177.9 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 88/129 (68%), Positives = 111/129 (86%)
Query: 180 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLV 239
++K +P L+LAPTREL +QI+DEA+KFAYRS +RPCVVYGG+++G Q+R ++RGC LLV
Sbjct: 267 QRKAYPTSLILAPTRELVSQIFDEARKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLV 326
Query: 240 ATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMF 299
ATPGRLVD++ERG+I L N ++L+LDEADRMLDMGFEPQIR IV+ MP DRQTLMF
Sbjct: 327 ATPGRLVDLIERGRISLVNIKYLILDEADRMLDMGFEPQIRRIVEGEDMPNVNDRQTLMF 386
Query: 300 SATFPKEIQ 308
SATFP++IQ
Sbjct: 387 SATFPRDIQ 395
Score = 380 (138.8 bits), Expect = 2.7e-37, Sum P(2) = 2.7e-37
Identities = 71/125 (56%), Positives = 95/125 (76%)
Query: 57 LPLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P F + + + + +NIALARY PTPVQKY+IP++++GRD+MACAQTGSGKT F
Sbjct: 181 VPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGF 240
Query: 116 LVPILNQMYERGPLPTPPAGRG-YPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
L PIL+Q Y+ GP PP+ G + ++K +P L+LAPTREL +QI+DEA+KFAYRS +
Sbjct: 241 LFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRSWV 300
Query: 175 RPCVV 179
RPCVV
Sbjct: 301 RPCVV 305
Score = 49 (22.3 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 16 LAGLDLSAKKES-APGSNPR----VYVPPHLRNQ 44
+ L L+ + + APG P Y+PPHLR +
Sbjct: 7 MGSLTLNDSQHAPAPGGPPSGGRAAYIPPHLRQR 40
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 441 (160.3 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 82/128 (64%), Positives = 105/128 (82%)
Query: 181 KKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVA 240
+K +P L+LAPTREL QI++E++KF YRS +RPC VYGG+++ Q+R +D+GC LL A
Sbjct: 252 RKAYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSA 311
Query: 241 TPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFS 300
TPGRLVD+++RG+I LAN +FLVLDEADRMLDMGFEPQIR IV+ M +RQTLMFS
Sbjct: 312 TPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFS 371
Query: 301 ATFPKEIQ 308
ATFP++IQ
Sbjct: 372 ATFPRDIQ 379
Score = 329 (120.9 bits), Expect = 5.8e-29, P = 5.8e-29
Identities = 80/173 (46%), Positives = 105/173 (60%)
Query: 10 TGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLPLPPQFDDIQMT 69
T LE+QL G K S G N Y + + SGG D + P+ +F +
Sbjct: 128 TLLERQLFGAVADGTKVST-GINFEKY--DDIPVEVSGG----D--IEPVN-EFTSPPLN 177
Query: 70 EIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPL 129
+ NI L+ Y +PTPVQK +IP++ SGRD+MACAQTGSGKTA FL PIL+ +++GP
Sbjct: 178 SHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPA 237
Query: 130 PTP---PAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
P AG GY RK +P L+LAPTREL QI++E++KF YRS +RPC V
Sbjct: 238 AVPVDQDAGMGYRPRK-AYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAV 289
Score = 64 (27.6 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 12 LEQQLAGL-DLSAKKESAPGSNPRVYVPPHLRNQPSGG 48
++QQ+ + ++ K + S PR Y+PP R++PS G
Sbjct: 5 VQQQVDSVGSVTEKLQKTNISRPRKYIPPFARDKPSAG 42
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 416 (151.5 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 78/128 (60%), Positives = 104/128 (81%)
Query: 181 KKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVA 240
+ V+PL ++L+PTRELA+QI+DEAKKF+Y++ ++ V YGG+ + Q+R+L+RG +LVA
Sbjct: 234 RTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVA 293
Query: 241 TPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFS 300
TPGRL D+LER ++ + RFL LDEADRMLDMGFEPQIR IV++ MP G RQTL+FS
Sbjct: 294 TPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFS 353
Query: 301 ATFPKEIQ 308
ATFP+EIQ
Sbjct: 354 ATFPREIQ 361
Score = 286 (105.7 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 61/121 (50%), Positives = 87/121 (71%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP F +I + E + NI +Y KPTPVQ++AIP+++ GRD+MACAQTGSGKTAAF
Sbjct: 156 PPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCF 215
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPC 177
PI++ + + + P RG SR V+PL ++L+PTRELA+QI+DEAKKF+Y++ ++
Sbjct: 216 PIISGIMKDQHVQRP---RG--SRT-VYPLAVILSPTRELASQIHDEAKKFSYQTGVKVV 269
Query: 178 V 178
V
Sbjct: 270 V 270
Score = 65 (27.9 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 22 SAKKESAPGSNPRVYVPPHLRNQPS 46
S+ + S P S P YVPPHLRN+P+
Sbjct: 18 SSNQNSHP-SRP-AYVPPHLRNRPA 40
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 411 (149.7 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 76/128 (59%), Positives = 102/128 (79%)
Query: 181 KKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVA 240
+ V+P ++L+PTRELA QI+DEAKKF+Y++ ++ V YGG+ + Q+R+L+RGC +LVA
Sbjct: 226 RAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQLRELERGCDILVA 285
Query: 241 TPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFS 300
TPGRL D+LER ++ + RFL LDEADRMLDMGFEPQIR IV++ MP G RQT++FS
Sbjct: 286 TPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFS 345
Query: 301 ATFPKEIQ 308
ATFP +IQ
Sbjct: 346 ATFPSQIQ 353
Score = 271 (100.5 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 58/121 (47%), Positives = 85/121 (70%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP F DI + + + NI +Y +PTPVQ++AIP++++ RD+MACAQTGSGKTAAF
Sbjct: 148 PPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCF 207
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPC 177
PI++ + + + P RG SR V+P ++L+PTRELA QI+DEAKKF+Y++ ++
Sbjct: 208 PIISGIMKDQHVERP---RG--SRA-VYPFAVILSPTRELACQIHDEAKKFSYQTGVKVV 261
Query: 178 V 178
V
Sbjct: 262 V 262
Score = 66 (28.3 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 23 AKKESAPGSNPRVYVPPHLRNQPS 46
A E A + YVPPHLRN+PS
Sbjct: 9 ADSEKAVSQSKPPYVPPHLRNRPS 32
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 423 (154.0 bits), Expect = 1.9e-42, Sum P(2) = 1.9e-42
Identities = 84/134 (62%), Positives = 107/134 (79%)
Query: 175 RPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRG 234
RP VR V+PL ++L+PTRELA QI+DEA+KF+Y++ ++ V YGG+ V Q+R+L+RG
Sbjct: 216 RPRGVRG-VYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERG 274
Query: 235 CHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDR 294
+LVATPGRL D+LERG++ L RFL LDEADRMLDMGFEPQIR IVQ+ MP G R
Sbjct: 275 VDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVR 334
Query: 295 QTLMFSATFPKEIQ 308
QT++FSATFP+EIQ
Sbjct: 335 QTMLFSATFPREIQ 348
Score = 277 (102.6 bits), Expect = 5.2e-26, Sum P(2) = 5.2e-26
Identities = 58/121 (47%), Positives = 83/121 (68%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP F +I + E + NI +Y KPTPVQ+ AIP++ +GRD+MACAQTGSGKTAAF
Sbjct: 143 PPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCF 202
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPC 177
PI++ + + + P RG V+PL ++L+PTRELA QI+DEA+KF+Y++ ++
Sbjct: 203 PIISGIMKDQHIERPRGVRG------VYPLAVILSPTRELACQIHDEARKFSYQTGVKVV 256
Query: 178 V 178
V
Sbjct: 257 V 257
Score = 49 (22.3 bits), Expect = 1.9e-42, Sum P(2) = 1.9e-42
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 36 YVPPHLRNQPSGGRNSTDTFLLPLPPQFD 64
YVPPHLR+ R + F+ P P D
Sbjct: 31 YVPPHLRS-----RTPSSEFVAPSPGNND 54
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 418 (152.2 bits), Expect = 7.6e-42, Sum P(2) = 7.6e-42
Identities = 83/130 (63%), Positives = 100/130 (76%)
Query: 179 VRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLL 238
V + P LVLAPTRELA QI+DEA KF+Y S + V+YGG+ V Q+ +LDRGC +L
Sbjct: 325 VPRAACPRALVLAPTRELAQQIFDEANKFSYGSPVSSVVIYGGAEVFHQINELDRGCDIL 384
Query: 239 VATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLM 298
VAT GRLVD+L RG++ L+ ++LVLDEADRMLDMGFEPQIR I+ E MP DRQTLM
Sbjct: 385 VATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEPQIRQIISEFDMPGCRDRQTLM 444
Query: 299 FSATFPKEIQ 308
FSATFPK+IQ
Sbjct: 445 FSATFPKQIQ 454
Score = 300 (110.7 bits), Expect = 7.8e-29, Sum P(2) = 7.8e-29
Identities = 62/118 (52%), Positives = 81/118 (68%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D+ + +++ NI A+Y KPTPVQK A+P+I+ RD+MACAQTGSGKTAAFL PI++
Sbjct: 249 FADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPIISG 308
Query: 123 MYERGPLPTPPAGR-GYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
+ G PPA + G P + P LVLAPTRELA QI+DEA KF+Y S + V+
Sbjct: 309 ILLDGAPEAPPAYKPGVP--RAACPRALVLAPTRELAQQIFDEANKFSYGSPVSSVVI 364
Score = 54 (24.1 bits), Expect = 7.6e-42, Sum P(2) = 7.6e-42
Identities = 20/75 (26%), Positives = 32/75 (42%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRV---------YVPPHLRNQPSGGRNS 51
M +N++ G ++GL +S K S +N YVPP RN+ + S
Sbjct: 1 MPIGNNKDNDGTTLNISGLTISDKSSSTSSNNNTTTTTTQTSEPYVPPSRRNKMNNSSGS 60
Query: 52 T-DTFLLPLPPQFDD 65
+ D + P P D+
Sbjct: 61 SRDDY--PSPSDRDN 73
Score = 48 (22.0 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 15/49 (30%), Positives = 19/49 (38%)
Query: 2 SYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRN 50
S +N NG G G D +++ P N Y P N S G N
Sbjct: 114 SRNNNSNGGGSSSGSGGWDNGPREQGPPRGNSYSYSP---NNSFSRGGN 159
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 423 (154.0 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 96/199 (48%), Positives = 125/199 (62%)
Query: 111 KTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAY 170
KTA + P Q Y +P GR S + G A L I + +
Sbjct: 247 KTAGYDRPTPVQKYS---IPALQGGRDLMSCAQTGS-GKTAAFLVPLVNAILQDGPDAVH 302
Query: 171 RSQLRPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGG-SNVGDQMR 229
RS + RKK +P LVL+PTREL+ QI++E++KFAYR+ + ++YGG N DQ+
Sbjct: 303 RS-VTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGRENYKDQIH 361
Query: 230 DLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMP 289
L GCH+L+ATPGRL+D++++G IG+ CR+LVLDEADRMLDMGFEPQIR IV+ N MP
Sbjct: 362 KLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMP 421
Query: 290 RTGDRQTLMFSATFPKEIQ 308
+R T MFSATFPKEIQ
Sbjct: 422 SKEERITAMFSATFPKEIQ 440
Score = 313 (115.2 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 62/119 (52%), Positives = 84/119 (70%)
Query: 57 LPLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P F D+ + E I NI A YD+PTPVQKY+IP + GRD+M+CAQTGSGKTAAF
Sbjct: 226 VPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAF 285
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
LVP++N + + GP + RKK +P LVL+PTREL+ QI++E++KFAYR+ +
Sbjct: 286 LVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPI 344
Score = 45 (20.9 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 36 YVPPHLRNQPSG 47
YVPPHLR G
Sbjct: 22 YVPPHLRGGDGG 33
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 274 (101.5 bits), Expect = 4.4e-41, Sum P(2) = 4.4e-41
Identities = 59/121 (48%), Positives = 79/121 (65%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVLAPTRELA QI + LR +V GG+ +G Q+R L+RG H+LVATPGRL+D
Sbjct: 84 LVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIRQLERGAHILVATPGRLID 143
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
++E+ + L L+LDEAD+MLD+GF +R I + +P RQTL FSAT PK +
Sbjct: 144 LMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKN--VP--SKRQTLFFSATMPKAV 199
Query: 308 Q 308
+
Sbjct: 200 E 200
Score = 187 (70.9 bits), Expect = 4.4e-41, Sum P(2) = 4.4e-41
Identities = 45/99 (45%), Positives = 60/99 (60%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F + +T I ++ A Y PTP+Q+ AIP++I GRD++ AQTG+GKT AF PIL++
Sbjct: 9 FQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILDR 68
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
+ R P P G +V LVLAPTRELA QI
Sbjct: 69 L-SRNASPAPVRGT------RV----LVLAPTRELAGQI 96
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 269 (99.8 bits), Expect = 1.4e-39, Sum P(2) = 1.4e-39
Identities = 57/121 (47%), Positives = 79/121 (65%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L ++PTRELA QIYD + S + VYGG + DQ+R + + +++VATPGRLVD
Sbjct: 227 LCISPTRELALQIYDNLIELTADSGVNCVAVYGGVSKDDQIRKI-KTANVVVATPGRLVD 285
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
++ G I L +LVLDEADRML+ GFE I+ I+ +RQTLMF+AT+PKE+
Sbjct: 286 LINDGAINLGKVNYLVLDEADRMLEKGFEEDIKTIISNTS---NSERQTLMFTATWPKEV 342
Query: 308 Q 308
+
Sbjct: 343 R 343
Score = 184 (69.8 bits), Expect = 1.4e-39, Sum P(2) = 1.4e-39
Identities = 43/101 (42%), Positives = 60/101 (59%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
FD +Q+T IT+ L+++DKPTP+Q + P ++SG+DV+ A+TGSGKT AF VP +N
Sbjct: 157 FDQVQLTSAITSK--LSKFDKPTPIQSVSWPFLLSGKDVIGVAETGSGKTFAFGVPAINN 214
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYD 163
+ G T L ++PTRELA QIYD
Sbjct: 215 IITTGNTKTLSV--------------LCISPTRELALQIYD 241
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 408 (148.7 bits), Expect = 8.1e-38, P = 8.1e-38
Identities = 76/124 (61%), Positives = 99/124 (79%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTREL QIY EA+KF++ + +RP VVYGG N G QMR++++GC++L TPGR
Sbjct: 259 PEAVIVAPTRELINQIYQEARKFSFGTCVRPVVVYGGVNTGYQMREIEKGCNVLCGTPGR 318
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+DM+ RGK+GL+ R LVLDEADRMLDMGFEP +R +V GMP +RQTLMFSATFP
Sbjct: 319 LLDMIGRGKVGLSKVRHLVLDEADRMLDMGFEPDMRRLVGSPGMPSKEERQTLMFSATFP 378
Query: 305 KEIQ 308
++IQ
Sbjct: 379 EDIQ 382
Score = 280 (103.6 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 59/117 (50%), Positives = 82/117 (70%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F++ ++ E + NNI+ + Y KPTPVQKY +P+I +GRD+MACAQTGSGKTAAFL+PIL Q
Sbjct: 183 FEEAKLCESLENNISRSGYVKPTPVQKYGLPIISAGRDLMACAQTGSGKTAAFLLPILQQ 242
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
+ G A R ++ P +++APTREL QIY EA+KF++ + +RP VV
Sbjct: 243 LMADGVA----ASRFSEIQE---PEAVIVAPTRELINQIYQEARKFSFGTCVRPVVV 292
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 405 (147.6 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 81/130 (62%), Positives = 100/130 (76%)
Query: 180 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGG-SNVGDQMRDLDRGCHLL 238
R+ +P LVL+PTRELA QI+ EA KF+Y+S ++ ++YGG N DQ+ L G H+L
Sbjct: 218 RRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHIL 277
Query: 239 VATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLM 298
+ATPGRL+D++E+G IGLA CR+LVLDEADRMLDMGFEPQIR IV + GMP R T M
Sbjct: 278 IATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQ-GMPPKTARTTAM 336
Query: 299 FSATFPKEIQ 308
FSATFPKEIQ
Sbjct: 337 FSATFPKEIQ 346
Score = 279 (103.3 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 54/118 (45%), Positives = 80/118 (67%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F++ + N+ + Y KPTPVQK++IP +++ RD+M+CAQTGSGKTAAFL+PI+
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 123 MYERGP-LPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
+ GP + PPA R+ +P LVL+PTRELA QI+ EA KF+Y+S ++ ++
Sbjct: 201 ILAGGPDMVKPPAFTN--GRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAIL 256
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 397 (144.8 bits), Expect = 3.3e-36, P = 3.3e-36
Identities = 76/124 (61%), Positives = 99/124 (79%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTREL QIY EA+KFAY + +RP VVYGG N G +R++ +GC++L ATPGR
Sbjct: 355 PEAIIVAPTRELINQIYLEARKFAYGTCVRPVVVYGGINTGYTIREVLKGCNVLCATPGR 414
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L D++ RGKIGL+ R+LVLDEADRMLDMGFEP++R +V GMP +RQTLMFSAT+P
Sbjct: 415 LHDLIGRGKIGLSKVRYLVLDEADRMLDMGFEPEMRKLVASPGMPSKEERQTLMFSATYP 474
Query: 305 KEIQ 308
++IQ
Sbjct: 475 EDIQ 478
Score = 264 (98.0 bits), Expect = 8.4e-22, P = 8.4e-22
Identities = 56/117 (47%), Positives = 80/117 (68%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F++ + + ++ N++ + Y KPTPVQK+ IP+I +GRD+MACAQTGSGKTAAFL+PIL +
Sbjct: 279 FEEAGLCDSLSKNVSKSGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQR 338
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
G A + ++ P +++APTREL QIY EA+KFAY + +RP VV
Sbjct: 339 FMTDGV-----AASKFSEIQE--PEAIIVAPTRELINQIYLEARKFAYGTCVRPVVV 388
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 276 (102.2 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 63/130 (48%), Positives = 84/130 (64%)
Query: 185 PLGLVLAPTRELATQIYD------EAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLL 238
P GL++ P+RELA QI+D +A A ++R + GG +G+Q +D+ G H++
Sbjct: 267 PFGLIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIV 326
Query: 239 VATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLM 298
VATPGRL DML + I L CR+LVLDEADRMLDMGFE +I+ I RQTL+
Sbjct: 327 VATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFF----KAQRQTLL 382
Query: 299 FSATFPKEIQ 308
FSAT P++IQ
Sbjct: 383 FSATMPRKIQ 392
Score = 141 (54.7 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 84 PTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKK 143
PT +Q IPV +SGRD++ A TGSGKT F++P++ E+ P +
Sbjct: 213 PTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQE--------MKLPFMRS 264
Query: 144 VFPLGLVLAPTRELATQIYD 163
P GL++ P+RELA QI+D
Sbjct: 265 EGPFGLIIVPSRELARQIFD 284
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 328 (120.5 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 63/105 (60%), Positives = 82/105 (78%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ L+LAPTRELA QI+ +AKKF + + ++P V+YGG+N+ Q+ +LD+G ++VATPGR
Sbjct: 452 PICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGR 511
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMP 289
L D+LE+GKI L FLVLDEADRMLDMGF PQIR IV + MP
Sbjct: 512 LNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMP 556
Score = 242 (90.2 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 52/128 (40%), Positives = 78/128 (60%)
Query: 63 FDD--IQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL 120
FDD + + E++ +NI YDK TP+QKY++ +I++ D++ AQTGSGKTA +L+PI+
Sbjct: 362 FDDPSLNLNELLLSNIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPII 421
Query: 121 NQMYERGPLPTPPAGRGYPSRKKV---------FPLGLVLAPTRELATQIYDEAKKFAYR 171
N M + PP Y K P+ L+LAPTRELA QI+ +AKKF +
Sbjct: 422 NHML----INDPPKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAKKFCFE 477
Query: 172 SQLRPCVV 179
+ ++P V+
Sbjct: 478 TGIKPVVL 485
Score = 64 (27.6 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 294 RQTLMFSATFPKEIQ 308
RQT+MFSATF KEIQ
Sbjct: 581 RQTIMFSATFRKEIQ 595
Score = 42 (19.8 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 33 PRVYVPPHLRNQPSGGRN 50
PR Y PP LRNQ + N
Sbjct: 249 PR-YKPPMLRNQGNFNNN 265
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 328 (120.5 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 63/105 (60%), Positives = 82/105 (78%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ L+LAPTRELA QI+ +AKKF + + ++P V+YGG+N+ Q+ +LD+G ++VATPGR
Sbjct: 452 PICLILAPTRELAVQIFYDAKKFCFETGIKPVVLYGGNNIKTQLSNLDKGADIIVATPGR 511
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMP 289
L D+LE+GKI L FLVLDEADRMLDMGF PQIR IV + MP
Sbjct: 512 LNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQIRSIVNDYDMP 556
Score = 242 (90.2 bits), Expect = 2.0e-25, Sum P(3) = 2.0e-25
Identities = 52/128 (40%), Positives = 78/128 (60%)
Query: 63 FDD--IQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL 120
FDD + + E++ +NI YDK TP+QKY++ +I++ D++ AQTGSGKTA +L+PI+
Sbjct: 362 FDDPSLNLNELLLSNIKKVNYDKTTPIQKYSLNIIMNRNDLIGVAQTGSGKTAGYLLPII 421
Query: 121 NQMYERGPLPTPPAGRGYPSRKKV---------FPLGLVLAPTRELATQIYDEAKKFAYR 171
N M + PP Y K P+ L+LAPTRELA QI+ +AKKF +
Sbjct: 422 NHML----INDPPKHTYYEQNNKTSNYYFNRVCLPICLILAPTRELAVQIFYDAKKFCFE 477
Query: 172 SQLRPCVV 179
+ ++P V+
Sbjct: 478 TGIKPVVL 485
Score = 64 (27.6 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 13/15 (86%), Positives = 14/15 (93%)
Query: 294 RQTLMFSATFPKEIQ 308
RQT+MFSATF KEIQ
Sbjct: 581 RQTIMFSATFRKEIQ 595
Score = 42 (19.8 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 33 PRVYVPPHLRNQPSGGRN 50
PR Y PP LRNQ + N
Sbjct: 249 PR-YKPPMLRNQGNFNNN 265
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 371 (135.7 bits), Expect = 2.1e-33, P = 2.1e-33
Identities = 70/124 (56%), Positives = 96/124 (77%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTREL QIY +A+KF+Y + +RP VVYGG MRD+++GC++L ATPGR
Sbjct: 352 PEAIIIAPTRELINQIYLDARKFSYGTCVRPVVVYGGIQPVHAMRDVEKGCNILCATPGR 411
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D++ + KIGL+ R+LVLDEADRMLDMGF P+I ++ + GMP RQTLMFSAT+P
Sbjct: 412 LLDIVSKEKIGLSKLRYLVLDEADRMLDMGFAPEIEKLMTKPGMPTKEKRQTLMFSATYP 471
Query: 305 KEIQ 308
+EI+
Sbjct: 472 EEIR 475
Score = 272 (100.8 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 60/131 (45%), Positives = 87/131 (66%)
Query: 59 LPPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+PP F++ + E + N+A A Y K TPVQK++IP+I++GRD+MACAQTGSGKTAAF
Sbjct: 269 VPPAILTFEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLMACAQTGSGKTAAF 328
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
L+PIL+ M G + Y ++ P +++APTREL QIY +A+KF+Y + +R
Sbjct: 329 LLPILSYMMNEGITASQ-----YLQLQE--PEAIIIAPTRELINQIYLDARKFSYGTCVR 381
Query: 176 PCVVRKKVFPL 186
P VV + P+
Sbjct: 382 PVVVYGGIQPV 392
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 364 (133.2 bits), Expect = 4.0e-33, P = 4.0e-33
Identities = 104/255 (40%), Positives = 141/255 (55%)
Query: 61 PQFDDIQMTEIITN------NIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAA 114
PQ+D Q+ + N ++A AR D+ + + + G D+ T A
Sbjct: 77 PQWDLEQLPKFEKNFYSEHPDVA-ARSDRDIEQFRKENEMTVKGHDIPHPITTFD--EAG 133
Query: 115 FLVPILNQMYERG-PLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ 173
F +L ++ ++G P PTP +G+P + + +A T T Y +Q
Sbjct: 134 FPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDM-IGIAATGSGKTLSYCLPSIVHINAQ 192
Query: 174 LRPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDR 233
+ ++ P+ LVLAPTRELA QI E KF S++R VYGG+ G Q+RDL R
Sbjct: 193 PQ---LQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLAR 249
Query: 234 GCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGD 293
G + +ATPGRL+DMLE GK L +LVLDEADRMLDMGFEPQIR IV + P D
Sbjct: 250 GVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---D 305
Query: 294 RQTLMFSATFPKEIQ 308
RQTLM+SAT+PKE+Q
Sbjct: 306 RQTLMWSATWPKEVQ 320
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 361 (132.1 bits), Expect = 6.4e-33, P = 6.4e-33
Identities = 102/291 (35%), Positives = 152/291 (52%)
Query: 28 APGSNPRVYVPPHL---RNQP-SGGRNSTDTFLLPLPPQFDDIQMTEIITNNIALARYDK 83
APG V P + R++ GR T++ P PP+ D+ + + I +YD+
Sbjct: 94 APGGRGAVGGPAGVLKGRSEEIDSGRGPKVTYVPPPPPE-DEQSIFACYQSGINFDKYDE 152
Query: 84 PTPVQKYAI--PVIISGRDVMACAQT---GSGKTA-AFLVPILNQMYERGPLPTPPAGRG 137
V+ + P + + AQT KT + L P+ ++ +P AGR
Sbjct: 153 -CAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPV-----QKHSIPVIQAGRD 206
Query: 138 YPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVRKKVFPLGLVLAPTRELA 197
S + G T I D K + +K+ P +++APTREL
Sbjct: 207 LMSCAQT---GS--GKTAAFLLPIVDRMMKDGVTAS----AFQKQQEPQCIIVAPTRELI 257
Query: 198 TQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLA 257
QI+ EA+KF Y + +RP V+YGG+ G +R + +GC++L ATPGRL+D++E+GKI L
Sbjct: 258 NQIFLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLV 317
Query: 258 NCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
++LVLDEADRMLDMGF ++ ++ MP RQTLMFSATFP+E+Q
Sbjct: 318 EVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQ 368
>UNIPROTKB|D6RCM4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HGNC:HGNC:18700 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RCM4 SMR:D6RCM4 Ensembl:ENST00000506511
ArrayExpress:D6RCM4 Bgee:D6RCM4 Uniprot:D6RCM4
Length = 518
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 103/313 (32%), Positives = 160/313 (51%)
Query: 4 ESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLPLPPQF 63
+++Q+ +G + G +E GS + + S + T++ P PP+
Sbjct: 176 DTSQSRSGSGSERGGYK-GLNEEVITGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPPED 234
Query: 64 DDIQMTEIITNNIALARYDKP-TPVQKY-AIPVIISGRDVMACAQTGSG-KTAAF--LVP 118
+D T I +YD V + A P I++ + C + A + L P
Sbjct: 235 EDSIFAHYQTG-INFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 293
Query: 119 ILNQMYERGPLPTPPAGRGYPSRKKVFP--LGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
+ Q Y +P AGR + + L P LA ++D ++ P
Sbjct: 294 V--QKYS---IPIILAGRDLMACAQTGSGKTAAFLLPI--LAHMMHDGITASRFKELQEP 346
Query: 177 -CVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGC 235
C++ +APTREL QIY EA+KF++ + +R V+YGG+ +G +R + +GC
Sbjct: 347 ECII----------VAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGC 396
Query: 236 HLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQ 295
++L ATPGRL+D++ + KIGL ++LVLDEADRMLDMGF P+++ ++ GMP RQ
Sbjct: 397 NILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQ 456
Query: 296 TLMFSATFPKEIQ 308
TLMFSATFP+EIQ
Sbjct: 457 TLMFSATFPEEIQ 469
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 361 (132.1 bits), Expect = 9.6e-33, P = 9.6e-33
Identities = 102/291 (35%), Positives = 152/291 (52%)
Query: 28 APGSNPRVYVPPHL---RNQP-SGGRNSTDTFLLPLPPQFDDIQMTEIITNNIALARYDK 83
APG V P + R++ GR T++ P PP+ D+ + + I +YD+
Sbjct: 94 APGGRGAVGGPAGVLKGRSEEIDSGRGPKVTYVPPPPPE-DEQSIFACYQSGINFDKYDE 152
Query: 84 PTPVQKYAI--PVIISGRDVMACAQT---GSGKTA-AFLVPILNQMYERGPLPTPPAGRG 137
V+ + P + + AQT KT + L P+ ++ +P AGR
Sbjct: 153 -CAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPV-----QKHSIPVIQAGRD 206
Query: 138 YPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVRKKVFPLGLVLAPTRELA 197
S + G T I D K + +K+ P +++APTREL
Sbjct: 207 LMSCAQT---GS--GKTAAFLLPIVDRMMKDGVTAS----AFQKQQEPQCIIVAPTRELI 257
Query: 198 TQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLA 257
QI+ EA+KF Y + +RP V+YGG+ G +R + +GC++L ATPGRL+D++E+GKI L
Sbjct: 258 NQIFLEARKFVYGTCIRPVVIYGGTQTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLV 317
Query: 258 NCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
++LVLDEADRMLDMGF ++ ++ MP RQTLMFSATFP+E+Q
Sbjct: 318 EVKYLVLDEADRMLDMGFGLDMKKLISYPEMPSKDRRQTLMFSATFPEEVQ 368
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 362 (132.5 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 103/313 (32%), Positives = 161/313 (51%)
Query: 4 ESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLPLPPQF 63
+++Q+ +G + G +E GS + + S + T++ P PP+
Sbjct: 197 DTSQSRSGSGSERGGYK-GLNEEVITGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPPED 255
Query: 64 DDIQMTEIITNNIALARYDKP-TPVQKY-AIPVIISGRDVMACAQTGSG-KTAAF--LVP 118
+D T I+ +YD V + A P I++ + C + A + L P
Sbjct: 256 EDSIFAHYQTG-ISFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 314
Query: 119 ILNQMYERGPLPTPPAGRGYPSRKKVFP--LGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
+ Q Y +P AGR + + L P LA ++D ++ P
Sbjct: 315 V--QKYS---IPIILAGRDLMACAQTGSGKTAAFLLPI--LAHMMHDGITASCFKELQEP 367
Query: 177 -CVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGC 235
C++ +APTREL QIY EA+KF++ + +R V+YGG+ +G +R + +GC
Sbjct: 368 ECII----------VAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGC 417
Query: 236 HLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQ 295
++L ATPGRL+D++ + KIGL ++LVLDEADRMLDMGF P+++ ++ GMP RQ
Sbjct: 418 NILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQ 477
Query: 296 TLMFSATFPKEIQ 308
TLMFSATFP+EIQ
Sbjct: 478 TLMFSATFPEEIQ 490
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 347 (127.2 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 72/124 (58%), Positives = 90/124 (72%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A + S+L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 245 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 304
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 305 LIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 360
Query: 305 KEIQ 308
KE++
Sbjct: 361 KEVR 364
Score = 156 (60.0 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 39/99 (39%), Positives = 57/99 (57%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
+ +PTP+Q P+ +SGRD++ AQTGSGKT A+L+P + + + P G G
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ---PYLERGDG--- 244
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
P+ LVLAPTRELA Q+ A + S+L+ C+
Sbjct: 245 -----PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCI 278
Score = 39 (18.8 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 20 DLSAKKESA-PGSNPRVYVPP-HLRNQPSGGRNSTDTFLLPLP 60
D ++++ESA P + P PP + +P + PLP
Sbjct: 30 DSASERESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIRAPLP 72
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 347 (127.2 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 72/124 (58%), Positives = 90/124 (72%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A + S+L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 245 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 304
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 305 LIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 360
Query: 305 KEIQ 308
KE++
Sbjct: 361 KEVR 364
Score = 156 (60.0 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 39/99 (39%), Positives = 57/99 (57%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
+ +PTP+Q P+ +SGRD++ AQTGSGKT A+L+P + + + P G G
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ---PYLERGDG--- 244
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
P+ LVLAPTRELA Q+ A + S+L+ C+
Sbjct: 245 -----PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCI 278
Score = 39 (18.8 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 20 DLSAKKESA-PGSNPRVYVPP-HLRNQPSGGRNSTDTFLLPLP 60
D ++++ESA P + P PP + +P + PLP
Sbjct: 30 DSASERESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIRAPLP 72
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 268 (99.4 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 54/122 (44%), Positives = 79/122 (64%)
Query: 187 GLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLV 246
GL+L PTREL Q+ DE K F ++ VYGG Q+ +L +G ++VATPGRL+
Sbjct: 430 GLILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVATPGRLL 489
Query: 247 DMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
D LE G I L C ++V+DEADR+LDMGFE Q+R I+ + ++Q L +AT+P++
Sbjct: 490 DFLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNK----NKQLLFLTATWPEQ 545
Query: 307 IQ 308
++
Sbjct: 546 VR 547
Score = 121 (47.7 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 62 QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVP 118
+F D+ E I N + ++ +PT +QK P+ +SG+D++ A+TGSGKT AF++P
Sbjct: 289 KFSDVCFHESILNYLN-NKFSEPTAIQKITWPIALSGKDLIGVAETGSGKTLAFVLP 344
Score = 69 (29.3 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 148 GLVLAPTRELATQIYDEAKKF 168
GL+L PTREL Q+ DE K F
Sbjct: 430 GLILLPTRELCLQVLDEIKSF 450
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 347 (127.2 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 72/124 (58%), Positives = 90/124 (72%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A + S+L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 247 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 306
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 307 LIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 362
Query: 305 KEIQ 308
KE++
Sbjct: 363 KEVR 366
Score = 156 (60.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 39/99 (39%), Positives = 57/99 (57%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
+ +PTP+Q P+ +SGRD++ AQTGSGKT A+L+P + + + P G G
Sbjct: 193 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ---PYLERGDG--- 246
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
P+ LVLAPTRELA Q+ A + S+L+ C+
Sbjct: 247 -----PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCI 280
Score = 39 (18.8 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 20 DLSAKKESA-PGSNPRVYVPP-HLRNQPSGGRNSTDTFLLPLP 60
D ++++ESA P + P PP + +P + PLP
Sbjct: 32 DSASERESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIRAPLP 74
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 347 (127.2 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 72/124 (58%), Positives = 90/124 (72%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A + S+L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 247 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 306
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 307 LIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 362
Query: 305 KEIQ 308
KE++
Sbjct: 363 KEVR 366
Score = 156 (60.0 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 39/99 (39%), Positives = 57/99 (57%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
+ +PTP+Q P+ +SGRD++ AQTGSGKT A+L+P + + + P G G
Sbjct: 193 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ---PYLERGDG--- 246
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
P+ LVLAPTRELA Q+ A + S+L+ C+
Sbjct: 247 -----PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCI 280
Score = 39 (18.8 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 20 DLSAKKESA-PGSNPRVYVPP-HLRNQPSGGRNSTDTFLLPLP 60
D ++++ESA P + P PP + +P + PLP
Sbjct: 32 DSASERESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIRAPLP 74
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 360 (131.8 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 66/124 (53%), Positives = 92/124 (74%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTREL QIY +A+KF+Y + +RP V+YGG+ + ++ + GC++L ATPGR
Sbjct: 364 PEAIIVAPTRELINQIYLDARKFSYGTCVRPVVIYGGTQMFHSLKQISEGCNILCATPGR 423
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D++ + KIGL R+LVLDEADRMLDMGF I +++ +GMP +RQTLMFSATFP
Sbjct: 424 LLDVIRKEKIGLTKLRYLVLDEADRMLDMGFREDIENLLKSSGMPSKEERQTLMFSATFP 483
Query: 305 KEIQ 308
IQ
Sbjct: 484 SSIQ 487
Score = 258 (95.9 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 53/124 (42%), Positives = 83/124 (66%)
Query: 59 LPPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+PP F++ + + + N+ + Y K TP+QK++IP+I++GRD+MACAQTGSGKTAAF
Sbjct: 281 VPPAILTFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAF 340
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
L+PIL + +G + + K+ P +++APTREL QIY +A+KF+Y + +R
Sbjct: 341 LLPILAHLMVKGV-----ESSAFQTLKE--PEAIIVAPTRELINQIYLDARKFSYGTCVR 393
Query: 176 PCVV 179
P V+
Sbjct: 394 PVVI 397
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 358 (131.1 bits), Expect = 5.6e-32, P = 5.6e-32
Identities = 103/313 (32%), Positives = 160/313 (51%)
Query: 4 ESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLPLPPQF 63
+++Q+ +G + G +E GS + + S + T++ P PP+
Sbjct: 176 DTSQSRSGSGSERGGYK-GLNEEVITGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPPED 234
Query: 64 DDIQMTEIITNNIALARYDKP-TPVQKY-AIPVIISGRDVMACAQTGSG-KTAAF--LVP 118
+D T I +YD V + A P I++ + C + A + L P
Sbjct: 235 EDSIFAHYQTG-INFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 293
Query: 119 ILNQMYERGPLPTPPAGRGYPSRKKVFP--LGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
+ Q Y +P AGR + + L P LA ++D ++ P
Sbjct: 294 V--QKYS---IPIILAGRDLMACAQTGSGKTAAFLLPI--LAHMMHDGITASRFKELQEP 346
Query: 177 -CVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGC 235
C++ +APTREL QIY EA+KF++ + +R V+YGG+ +G +R + +GC
Sbjct: 347 ECII----------VAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGC 396
Query: 236 HLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQ 295
++L ATPGRL+D++ + KIGL ++LVLDEADRMLDMGF P+++ ++ GMP RQ
Sbjct: 397 NILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQ 456
Query: 296 TLMFSATFPKEIQ 308
TLMFSATFP+EIQ
Sbjct: 457 TLMFSATFPEEIQ 469
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 353 (129.3 bits), Expect = 5.8e-32, P = 5.8e-32
Identities = 75/124 (60%), Positives = 90/124 (72%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA QI E KF + S++R VYGG Q+RDL RG +++ATPGR
Sbjct: 187 PIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGR 246
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+DMLE GK L +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 247 LIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 302
Query: 305 KEIQ 308
KE++
Sbjct: 303 KEVK 306
Score = 187 (70.9 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 48/124 (38%), Positives = 69/124 (55%)
Query: 57 LPLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P FD+ + + N + +DKPT +Q P+ +SGRD++ A TGSGKT ++
Sbjct: 108 IPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSY 167
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
+P + + + PL P G G P+ LVLAPTRELA QI E KF + S++R
Sbjct: 168 CLPGIVHINAQ-PLLAP--GDG--------PIVLVLAPTRELAVQIQTECSKFGHSSRIR 216
Query: 176 -PCV 178
CV
Sbjct: 217 NTCV 220
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 358 (131.1 bits), Expect = 6.1e-32, P = 6.1e-32
Identities = 103/313 (32%), Positives = 160/313 (51%)
Query: 4 ESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLPLPPQF 63
+++Q+ +G + G +E GS + + S + T++ P PP+
Sbjct: 196 DTSQSRSGSGSERGGYK-GLNEEVITGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPPED 254
Query: 64 DDIQMTEIITNNIALARYDKP-TPVQKY-AIPVIISGRDVMACAQTGSG-KTAAF--LVP 118
+D T I +YD V + A P I++ + C + A + L P
Sbjct: 255 EDSIFAHYQTG-INFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTP 313
Query: 119 ILNQMYERGPLPTPPAGRGYPSRKKVFP--LGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
+ Q Y +P AGR + + L P LA ++D ++ P
Sbjct: 314 V--QKYS---IPIILAGRDLMACAQTGSGKTAAFLLPI--LAHMMHDGITASRFKELQEP 366
Query: 177 -CVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGC 235
C++ +APTREL QIY EA+KF++ + +R V+YGG+ +G +R + +GC
Sbjct: 367 ECII----------VAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGC 416
Query: 236 HLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQ 295
++L ATPGRL+D++ + KIGL ++LVLDEADRMLDMGF P+++ ++ GMP RQ
Sbjct: 417 NILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQ 476
Query: 296 TLMFSATFPKEIQ 308
TLMFSATFP+EIQ
Sbjct: 477 TLMFSATFPEEIQ 489
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 357 (130.7 bits), Expect = 7.8e-32, P = 7.8e-32
Identities = 67/124 (54%), Positives = 95/124 (76%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTREL QIY EA+KF++ + +R V+YGG+ +G +R + +GC++L ATPGR
Sbjct: 364 PECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGR 423
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D++ + KIGL ++LVLDEADRMLDMGF P+++ ++ GMP RQTLMFSATFP
Sbjct: 424 LMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFP 483
Query: 305 KEIQ 308
+EIQ
Sbjct: 484 EEIQ 487
Score = 266 (98.7 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 58/117 (49%), Positives = 81/117 (69%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F++ + + + NNIA A Y K TPVQKY+IP+I++GRD+MACAQTGSGKTAAFL+PIL
Sbjct: 288 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 347
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
M G A R + ++ P +++APTREL QIY EA+KF++ + +R V+
Sbjct: 348 MMHDGIT----ASR-FKELQE--PECIIVAPTRELVNQIYLEARKFSFGTCVRAVVI 397
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 356 (130.4 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 74/124 (59%), Positives = 89/124 (71%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA QI A +F S +R V+GG+ G QMRDL RGC +++ATPGR
Sbjct: 355 PIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGR 414
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D L G L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 415 LIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQI-RP---DRQTLMWSATWP 470
Query: 305 KEIQ 308
KE++
Sbjct: 471 KEVK 474
Score = 162 (62.1 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 43/124 (34%), Positives = 64/124 (51%)
Query: 57 LPLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P Q F ++ + + + I Y PT +Q P+ +SG + + A+TGSGKT +
Sbjct: 276 VPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGY 335
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
++P + + + PL G G P+ LVLAPTRELA QI A +F S +R
Sbjct: 336 ILPAIVHINNQQPLQR---GDG--------PIALVLAPTRELAQQIQQVATEFGSSSYVR 384
Query: 176 -PCV 178
CV
Sbjct: 385 NTCV 388
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 351 (128.6 bits), Expect = 1.0e-31, P = 1.0e-31
Identities = 75/124 (60%), Positives = 89/124 (71%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ L+LAPTRELA QI E KF S++R VYGG G Q+RDL RG + +ATPGR
Sbjct: 199 PIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGR 258
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+DMLE GK L +LVLDEADRMLDMGFEPQIR I+ G R DRQTLM+SAT+P
Sbjct: 259 LIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKII---GQIRP-DRQTLMWSATWP 314
Query: 305 KEIQ 308
KE++
Sbjct: 315 KEVR 318
Score = 173 (66.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 45/124 (36%), Positives = 66/124 (53%)
Query: 57 LPLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P + FD+ + + + + PT +Q P+ +SGRDV+ A+TGSGKT +
Sbjct: 120 VPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTY 179
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
+P + + + PL P G G P+ L+LAPTRELA QI E KF S++R
Sbjct: 180 CLPAIVHINAQ-PLLAP--GDG--------PIVLILAPTRELAVQIQAEISKFGKSSRIR 228
Query: 176 -PCV 178
CV
Sbjct: 229 NTCV 232
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 356 (130.4 bits), Expect = 1.0e-31, P = 1.0e-31
Identities = 67/124 (54%), Positives = 95/124 (76%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTREL QIY EA+KF++ + +R V+YGG+ +G +R + +GC++L ATPGR
Sbjct: 368 PECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGR 427
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D++ + KIGL ++LVLDEADRMLDMGF P+++ ++ GMP RQTLMFSATFP
Sbjct: 428 LMDVIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFP 487
Query: 305 KEIQ 308
+EIQ
Sbjct: 488 EEIQ 491
Score = 259 (96.2 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 58/117 (49%), Positives = 79/117 (67%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F++ + + + NNIA A Y K TPVQKY+IP+I GRD+MACAQTGSGKTAAFL+PIL
Sbjct: 292 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAH 351
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
M G A R + ++ P +++APTREL QIY EA+KF++ + +R V+
Sbjct: 352 MMRDGIT----ASR-FKELQE--PECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 401
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 356 (130.4 bits), Expect = 1.0e-31, P = 1.0e-31
Identities = 67/124 (54%), Positives = 95/124 (76%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTREL QIY EA+KF++ + +R V+YGG+ +G +R + +GC++L ATPGR
Sbjct: 368 PECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGR 427
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D++ + KIGL ++LVLDEADRMLDMGF P+++ ++ GMP RQTLMFSATFP
Sbjct: 428 LMDVIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFP 487
Query: 305 KEIQ 308
+EIQ
Sbjct: 488 EEIQ 491
Score = 259 (96.2 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 58/117 (49%), Positives = 79/117 (67%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F++ + + + NNIA A Y K TPVQKY+IP+I GRD+MACAQTGSGKTAAFL+PIL
Sbjct: 292 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAH 351
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
M G A R + ++ P +++APTREL QIY EA+KF++ + +R V+
Sbjct: 352 MMRDGIT----ASR-FKELQE--PECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 401
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 355 (130.0 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 93/257 (36%), Positives = 140/257 (54%)
Query: 54 TFLLPLPPQFDDIQMTEIITNNIALARYDKP-TPVQKY-AIPVIISGRDVMACAQTGSGK 111
T++ P PP+ ++ T I +YD V + A P I++ + C +
Sbjct: 223 TYIPPPPPENEEATFAHYQTG-INFDKYDTILVEVSGHDAPPAILTFEETDLCQTLNNDI 281
Query: 112 TAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVFP--LGLVLAPTRELATQIYDEAKKFA 169
T A L + + G +P AGR + + L P LA + D
Sbjct: 282 TKAGYTK-LTPVQKYG-IPIILAGRDLMACAQTGSGKTAAFLLPI--LAHMMRDGVTASR 337
Query: 170 YRSQLRP-CVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQM 228
++ Q P C++ +APTREL QI+ EA+KF++ + +RP V+YGG+ +G +
Sbjct: 338 FKDQQEPECII----------VAPTRELINQIFLEARKFSFGTCVRPVVIYGGTQLGHSI 387
Query: 229 RDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGM 288
R + +GC++L ATPGRL+D++ + KIGL R+LVLDEADRMLDMGF P+++ ++ GM
Sbjct: 388 RQIMQGCNILCATPGRLMDIIGKEKIGLGQIRYLVLDEADRMLDMGFGPEMKKLISFPGM 447
Query: 289 PRTGDRQTLMFSATFPK 305
P RQTLMFSATFP+
Sbjct: 448 PSKEQRQTLMFSATFPR 464
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 72/124 (58%), Positives = 90/124 (72%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A + S+L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 164 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 223
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 224 LIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 279
Query: 305 KEIQ 308
KE++
Sbjct: 280 KEVR 283
Score = 157 (60.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 40/117 (34%), Positives = 62/117 (52%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F + + + + + +PTP+Q P+ +SGRD++ AQTGSGKT A+L+P +
Sbjct: 92 FHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVH 151
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
+ + P G G P+ LVLAPTRELA Q+ A + S+L+ C+
Sbjct: 152 INHQ---PYLERGDG--------PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCI 197
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 335 (123.0 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 86/201 (42%), Positives = 121/201 (60%)
Query: 109 SGKTAAFLVPILNQMYERG-PLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
S + F +L ++ G PTP + +P + + + +A T T Y
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDI-VAIAKTGSGKTLGY-LIPG 216
Query: 168 FAYRSQLRPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQ 227
F + ++R ++ P LVL+PTRELATQI +EA KF S++ +YGG+ G Q
Sbjct: 217 FLHLQRIRN---DSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQ 273
Query: 228 MRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENG 287
+RDL+RG ++VATPGRL D+LE +I L +LVLDEADRMLDMGFEPQIR IV+E
Sbjct: 274 LRDLERGADIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQIRKIVKE-- 331
Query: 288 MPRTGDRQTLMFSATFPKEIQ 308
+P RQTLM++AT+PK ++
Sbjct: 332 IPTK--RQTLMYTATWPKGVR 350
Score = 163 (62.4 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 56/171 (32%), Positives = 81/171 (47%)
Query: 8 NGTGLEQQLAGLDLSAKKESAPGS--NPRVYVPPHLRNQPSGGRNSTDTFLLPLPP--QF 63
NG G A SAP S +P Y H SGG+ +P PP F
Sbjct: 110 NGVGDSAYGAASTRVPLPSSAPASELSPEAYSRRH-EITVSGGQ-------VP-PPLMSF 160
Query: 64 DDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQM 123
+ + + A + PTP+Q + P+ + GRD++A A+TGSGKT +L+P +
Sbjct: 161 EATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHL 220
Query: 124 YERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+R + ++ P LVL+PTRELATQI +EA KF S++
Sbjct: 221 -QR-----------IRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRI 259
Score = 40 (19.1 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 78 LARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERG 127
+ +Y+KPTP ++P S V + +T A+ P + Y RG
Sbjct: 43 VTQYEKPTP----SLPPKFSPA-VSVSSSVQVQQTDAYAPPKDDDKYSRG 87
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 354 (129.7 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 67/124 (54%), Positives = 95/124 (76%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTREL QIY EA+KF++ + +R V+YGG+ +G +R + +GC++L ATPGR
Sbjct: 367 PECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGYSIRQIVQGCNILCATPGR 426
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D++ + KIGL ++LVLDEADRMLDMGF P+++ ++ GMP RQTLMFSATFP
Sbjct: 427 LMDIIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFP 486
Query: 305 KEIQ 308
+EIQ
Sbjct: 487 EEIQ 490
Score = 265 (98.3 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 58/117 (49%), Positives = 81/117 (69%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F++ + + + NNIA A Y K TPVQKY+IP+I++GRD+MACAQTGSGKTAAFL+PIL
Sbjct: 291 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 350
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
M G A R + ++ P +++APTREL QIY EA+KF++ + +R V+
Sbjct: 351 MMHDGIT----ASR-FKELQE--PECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 400
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 350 (128.3 bits), Expect = 2.1e-31, P = 2.1e-31
Identities = 101/267 (37%), Positives = 146/267 (54%)
Query: 47 GGRNSTDTFLLPLPPQ-FDDIQMTE---IITNNIALARYDKPTPVQKYAIPVIISGRDVM 102
GG + + + LP Q F ++ E + + A ++ + + + + GRDV
Sbjct: 102 GGSSKRELDSVSLPKQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVP 161
Query: 103 ACAQTGSGKTAAFLVPILNQMYERG-PLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
+ + A F IL + + G PTP +G+P K L + +A T T
Sbjct: 162 KPMKMF--QDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDL-IGIAETGSGKTLA 218
Query: 162 YDEAKKFAYRSQLRPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGG 221
Y +Q R + + P+ L+LAPTRELA QI +E++KF RS +R +YGG
Sbjct: 219 YLLPALVHVSAQPR---LGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGG 275
Query: 222 SNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRC 281
+ G Q+RDL RG +++ATPGRL+DMLE L +LVLDEADRMLDMGFEPQIR
Sbjct: 276 APKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRK 335
Query: 282 IVQENGMPRTGDRQTLMFSATFPKEIQ 308
IV + P DRQTL++SAT+P+E++
Sbjct: 336 IVSQI-RP---DRQTLLWSATWPREVE 358
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 351 (128.6 bits), Expect = 2.8e-31, P = 2.8e-31
Identities = 66/124 (53%), Positives = 94/124 (75%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTREL QIY EA+KF++ + +R V+YGG+ G +R + +GC++L ATPGR
Sbjct: 340 PECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGR 399
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D++ + KIGL ++LVLDEADRMLDMGF P+++ ++ GMP RQTL+FSATFP
Sbjct: 400 LMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFP 459
Query: 305 KEIQ 308
+EIQ
Sbjct: 460 EEIQ 463
Score = 264 (98.0 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 57/117 (48%), Positives = 81/117 (69%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F++ + + + NNIA A Y K TPVQKY+IP++++GRD+MACAQTGSGKTAAFL+PIL
Sbjct: 264 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAH 323
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
M G A R + ++ P +++APTREL QIY EA+KF++ + +R V+
Sbjct: 324 MMRDGIT----ASR-FKELQE--PECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 373
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 66/124 (53%), Positives = 94/124 (75%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTREL QIY EA+KF++ + +R V+YGG+ G +R + +GC++L ATPGR
Sbjct: 339 PECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQGCNILCATPGR 398
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D++ + KIGL ++LVLDEADRMLDMGF P+++ ++ GMP RQTL+FSATFP
Sbjct: 399 LMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFP 458
Query: 305 KEIQ 308
+EIQ
Sbjct: 459 EEIQ 462
Score = 264 (98.0 bits), Expect = 8.1e-22, P = 8.1e-22
Identities = 57/117 (48%), Positives = 81/117 (69%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F++ + + + NNIA A Y K TPVQKY+IP++++GRD+MACAQTGSGKTAAFL+PIL
Sbjct: 263 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAH 322
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
M G A R + ++ P +++APTREL QIY EA+KF++ + +R V+
Sbjct: 323 MMRDGIT----ASR-FKELQE--PECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 372
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 349 (127.9 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 71/124 (57%), Positives = 91/124 (73%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A ++ S+++ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 170 PICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGR 229
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 230 LIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 285
Query: 305 KEIQ 308
KE++
Sbjct: 286 KEVR 289
Score = 158 (60.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 41/123 (33%), Positives = 66/123 (53%)
Query: 58 PLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P +F + + + + I + PTP+Q PV +SG+D++ AQTGSGKT ++L
Sbjct: 92 PKPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYL 151
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
+P + + + P G G P+ LVLAPTRELA Q+ A ++ S+++
Sbjct: 152 LPAIVHINHQ---PFLEHGDG--------PICLVLAPTRELAQQVQQVAAEYGKASRIKS 200
Query: 177 -CV 178
C+
Sbjct: 201 TCI 203
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 351 (128.6 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 66/124 (53%), Positives = 94/124 (75%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTREL QIY EA+KF++ + +R V+YGG+ G +R + +GC++L ATPGR
Sbjct: 351 PECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGR 410
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D++ + KIGL ++LVLDEADRMLDMGF P+++ ++ GMP RQTL+FSATFP
Sbjct: 411 LMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFP 470
Query: 305 KEIQ 308
+EIQ
Sbjct: 471 EEIQ 474
Score = 264 (98.0 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 57/117 (48%), Positives = 81/117 (69%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F++ + + + NNIA A Y K TPVQKY+IP++++GRD+MACAQTGSGKTAAFL+PIL
Sbjct: 275 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAH 334
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
M G A R + ++ P +++APTREL QIY EA+KF++ + +R V+
Sbjct: 335 MMRDGIT----ASR-FKELQE--PECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 384
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 351 (128.6 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 66/124 (53%), Positives = 94/124 (75%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTREL QIY EA+KF++ + +R V+YGG+ G +R + +GC++L ATPGR
Sbjct: 351 PECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGR 410
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D++ + KIGL ++LVLDEADRMLDMGF P+++ ++ GMP RQTL+FSATFP
Sbjct: 411 LMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFP 470
Query: 305 KEIQ 308
+EIQ
Sbjct: 471 EEIQ 474
Score = 264 (98.0 bits), Expect = 8.3e-22, P = 8.3e-22
Identities = 57/117 (48%), Positives = 81/117 (69%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F++ + + + NNIA A Y K TPVQKY+IP++++GRD+MACAQTGSGKTAAFL+PIL
Sbjct: 275 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAH 334
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
M G A R + ++ P +++APTREL QIY EA+KF++ + +R V+
Sbjct: 335 MMRDGIT----ASR-FKELQE--PECIIVAPTRELINQIYLEARKFSFGTCVRAVVI 384
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 347 (127.2 bits), Expect = 4.7e-31, P = 4.7e-31
Identities = 71/124 (57%), Positives = 91/124 (73%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A +++ +L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 156 PICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 215
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 216 LIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 271
Query: 305 KEIQ 308
KE++
Sbjct: 272 KEVR 275
Score = 140 (54.3 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 36/99 (36%), Positives = 56/99 (56%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
+ +PT +Q PV +SG D++ AQTGSGKT ++L+P + + + P G G
Sbjct: 102 FTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ---PFLERGDG--- 155
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
P+ LVLAPTRELA Q+ A +++ +L+ C+
Sbjct: 156 -----PICLVLAPTRELAQQVQQVAAEYSRACRLKSTCI 189
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 342 (125.4 bits), Expect = 4.7e-31, P = 4.7e-31
Identities = 91/227 (40%), Positives = 127/227 (55%)
Query: 85 TPVQKYAI--PVIISGRDVMACAQTGSGKTAAFLVPILNQMYERG-PLPTPPAGRGYPSR 141
T V++Y + + G+D+ + S + F +L ++ + G PTP +G+P
Sbjct: 76 TEVEEYRKLREITVEGKDIPKPVK--SFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMA 133
Query: 142 KKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVRKKVFPLGLVLAPTRELATQIY 201
K L + +A T T Y +Q P + P+ LVLAPTRELA QI
Sbjct: 134 MKGRDL-IGIAETGSGKTLSYLLPAIVHVNAQ--PMLAHGDG-PIVLVLAPTRELAVQIQ 189
Query: 202 DEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRF 261
EA KF S+++ +YGG G Q+RDL +G +++ATPGRL+DM+E L +
Sbjct: 190 QEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTY 249
Query: 262 LVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
LVLDEADRMLDMGF+PQIR IV P DRQTL +SAT+PKE++
Sbjct: 250 LVLDEADRMLDMGFDPQIRKIVSHI-RP---DRQTLYWSATWPKEVE 292
Score = 182 (69.1 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 44/124 (35%), Positives = 69/124 (55%)
Query: 57 LPLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P + F D+ + + + A + +PTP+Q P+ + GRD++ A+TGSGKT ++
Sbjct: 94 IPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSY 153
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
L+P + + + P G G P+ LVLAPTRELA QI EA KF S+++
Sbjct: 154 LLPAIVHVNAQ---PMLAHGDG--------PIVLVLAPTRELAVQIQQEASKFGSSSKIK 202
Query: 176 P-CV 178
C+
Sbjct: 203 TTCI 206
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 347 (127.2 bits), Expect = 5.0e-31, P = 5.0e-31
Identities = 71/124 (57%), Positives = 91/124 (73%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A +++ +L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 164 PICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 223
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 224 LIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 279
Query: 305 KEIQ 308
KE++
Sbjct: 280 KEVR 283
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 36/99 (36%), Positives = 56/99 (56%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
+ +PT +Q PV +SG D++ AQTGSGKT ++L+P + + + P G G
Sbjct: 110 FTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ---PFLERGDG--- 163
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
P+ LVLAPTRELA Q+ A +++ +L+ C+
Sbjct: 164 -----PICLVLAPTRELAQQVQQVAAEYSRACRLKSTCI 197
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 345 (126.5 bits), Expect = 5.0e-31, P = 5.0e-31
Identities = 75/124 (60%), Positives = 88/124 (70%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA QI E KF S++R VYGG G Q+RDL RG + +ATPGR
Sbjct: 196 PIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGR 255
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+DML+ K L +LVLDEADRMLDMGFEPQIR IV + P DRQT+MFSAT+P
Sbjct: 256 LLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTVMFSATWP 311
Query: 305 KEIQ 308
KE+Q
Sbjct: 312 KEVQ 315
Score = 176 (67.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 45/124 (36%), Positives = 69/124 (55%)
Query: 57 LPLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P F++ + + ++ PTP+Q+ A P+ +SGRD++ + TGSGKT ++
Sbjct: 117 VPKPVTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSY 176
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
+P + + + PL +P G G P+ LVLAPTRELA QI E KF S++R
Sbjct: 177 CLPAIVHINAQ-PLLSP--GDG--------PIVLVLAPTRELAVQIQQECTKFGKSSRIR 225
Query: 176 -PCV 178
CV
Sbjct: 226 NTCV 229
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 347 (127.2 bits), Expect = 6.7e-31, P = 6.7e-31
Identities = 72/124 (58%), Positives = 90/124 (72%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A + S+L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 166 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 225
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 226 LIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 281
Query: 305 KEIQ 308
KE++
Sbjct: 282 KEVR 285
Score = 156 (60.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 39/99 (39%), Positives = 57/99 (57%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
+ +PTP+Q P+ +SGRD++ AQTGSGKT A+L+P + + + P G G
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ---PYLERGDG--- 165
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
P+ LVLAPTRELA Q+ A + S+L+ C+
Sbjct: 166 -----PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCI 199
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 347 (127.2 bits), Expect = 6.7e-31, P = 6.7e-31
Identities = 72/124 (58%), Positives = 90/124 (72%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A + S+L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 166 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 225
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 226 LIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 281
Query: 305 KEIQ 308
KE++
Sbjct: 282 KEVR 285
Score = 156 (60.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 39/99 (39%), Positives = 57/99 (57%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
+ +PTP+Q P+ +SGRD++ AQTGSGKT A+L+P + + + P G G
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ---PYLERGDG--- 165
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
P+ LVLAPTRELA Q+ A + S+L+ C+
Sbjct: 166 -----PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCI 199
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 347 (127.2 bits), Expect = 6.7e-31, P = 6.7e-31
Identities = 72/124 (58%), Positives = 90/124 (72%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A + S+L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 166 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 225
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 226 LIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 281
Query: 305 KEIQ 308
KE++
Sbjct: 282 KEVR 285
Score = 156 (60.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 39/99 (39%), Positives = 57/99 (57%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
+ +PTP+Q P+ +SGRD++ AQTGSGKT A+L+P + + + P G G
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ---PYLERGDG--- 165
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
P+ LVLAPTRELA Q+ A + S+L+ C+
Sbjct: 166 -----PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCI 199
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 347 (127.2 bits), Expect = 6.8e-31, P = 6.8e-31
Identities = 72/124 (58%), Positives = 90/124 (72%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A + S+L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 166 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 225
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 226 LIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 281
Query: 305 KEIQ 308
KE++
Sbjct: 282 KEVR 285
Score = 156 (60.0 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 39/99 (39%), Positives = 57/99 (57%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
+ +PTP+Q P+ +SGRD++ AQTGSGKT A+L+P + + + P G G
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQ---PYLERGDG--- 165
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
P+ LVLAPTRELA Q+ A + S+L+ C+
Sbjct: 166 -----PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCI 199
>DICTYBASE|DDB_G0270396 [details] [associations]
symbol:ddx49 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0270396 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:FRNLCAI
RefSeq:XP_646762.1 HSSP:P60842 ProteinModelPortal:Q55BR9
PRIDE:Q55BR9 EnsemblProtists:DDB0234206 GeneID:8617735
KEGG:ddi:DDB_G0270396 ProtClustDB:CLSZ2846935 Uniprot:Q55BR9
Length = 508
Score = 223 (83.6 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 54/121 (44%), Positives = 71/121 (58%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
++L PTRELA QI ++ + VV GG + Q LD+ H++VATPGRL
Sbjct: 76 VILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGGIDNVTQALILDKRPHIIVATPGRLAS 135
Query: 248 MLERG-KIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
L G KI L C+FLVLDEADR+L FE +I I++ +P RQTL+FSAT K
Sbjct: 136 HLNNGLKIALKFCKFLVLDEADRLLGEDFELEIASILEH--LPPPEKRQTLLFSATMTKN 193
Query: 307 I 307
+
Sbjct: 194 L 194
Score = 158 (60.7 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 40/102 (39%), Positives = 59/102 (57%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F+++ +T + N + P+ +Q IP I+ GRD++A A+TGSGKTA+F +PILNQ
Sbjct: 6 FEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILNQ 65
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDE 164
+ E P G VF ++L PTRELA QI ++
Sbjct: 66 LSE------DPYG--------VF--AVILTPTRELAVQIGEQ 91
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 344 (126.2 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 72/124 (58%), Positives = 90/124 (72%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A + S+++ VYGG+ G Q+RDL+RG + +ATPGR
Sbjct: 169 PICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGR 228
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L C +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 229 LIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 284
Query: 305 KEIQ 308
KE++
Sbjct: 285 KEVR 288
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 42/123 (34%), Positives = 64/123 (52%)
Query: 58 PLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P F Q + + + + + +PT +Q P+ +SGRD++ AQTGSGKT A+L
Sbjct: 91 PKPVTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYL 150
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
+P + + + P G G P+ LVLAPTRELA Q+ A + S+++
Sbjct: 151 LPAIVHINHQ---PYLERGDG--------PICLVLAPTRELAQQVQQVAFDYGKSSRIKS 199
Query: 177 -CV 178
CV
Sbjct: 200 TCV 202
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 341 (125.1 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 72/124 (58%), Positives = 88/124 (70%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ L+LAPTRELA QI E KF S++R VYGG G Q+RDL RG + +ATPGR
Sbjct: 214 PIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGR 273
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+DMLE G+ L +LVLDEADRMLDMGFEPQIR I+ + P DRQT M+SAT+P
Sbjct: 274 LIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQI-RP---DRQTCMWSATWP 329
Query: 305 KEIQ 308
KE++
Sbjct: 330 KEVR 333
Score = 185 (70.2 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 46/124 (37%), Positives = 70/124 (56%)
Query: 57 LPLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P + FD+ + + + + ++KPT +Q P+ +SGRDV+ A+TGSGKT ++
Sbjct: 135 VPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSY 194
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
+P + + + PL P G G P+ L+LAPTRELA QI E KF S++R
Sbjct: 195 CLPAIVHINAQ-PLLAP--GDG--------PIVLILAPTRELAVQIQAEISKFGKSSRIR 243
Query: 176 -PCV 178
CV
Sbjct: 244 NTCV 247
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 346 (126.9 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 71/124 (57%), Positives = 90/124 (72%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA QI A +F + +R ++GG+ G Q RDL+RG +++ATPGR
Sbjct: 231 PIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGR 290
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LERG L C +LVLDEADRMLDMGFEPQIR I+Q+ P DRQ LM+SAT+P
Sbjct: 291 LIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQI-RP---DRQVLMWSATWP 346
Query: 305 KEIQ 308
KE++
Sbjct: 347 KEVR 350
Score = 170 (64.9 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 44/124 (35%), Positives = 67/124 (54%)
Query: 57 LPLPP-QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P +F++ + + N I + KPT +Q P+ +SGRD++ AQTGSGKT A+
Sbjct: 152 VPTPSIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAY 211
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
++P + + + P G G P+ LVLAPTRELA QI A +F + +R
Sbjct: 212 VLPAVVHINNQ---PRLERGDG--------PIALVLAPTRELAQQIQQVAIEFGSNTHVR 260
Query: 176 -PCV 178
C+
Sbjct: 261 NTCI 264
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 345 (126.5 bits), Expect = 1.9e-30, P = 1.9e-30
Identities = 86/181 (47%), Positives = 111/181 (61%)
Query: 128 PLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVRKKVFPLG 187
P PTP + +P K + + LA T T + +Q P V+R+ P+
Sbjct: 405 PNPTPIQSQAWPIALKGRDI-IGLAKTGSGKTLAFLLPSIVHINAQ--P-VLREDDGPIV 460
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVLAPTRELA QI +E KF SQ+ VYGG++ Q+ L +G +++ATPGRL+D
Sbjct: 461 LVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLID 520
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
+LE GK L +LVLDEADRMLDMGFEPQIR I+ + P DRQTLMFSAT+PKE+
Sbjct: 521 ILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQI-RP---DRQTLMFSATWPKEV 576
Query: 308 Q 308
Q
Sbjct: 577 Q 577
Score = 179 (68.1 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 48/122 (39%), Positives = 64/122 (52%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP QF + I A + PTP+Q A P+ + GRD++ A+TGSGKT AFL+
Sbjct: 381 PPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLL 440
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL-RP 176
P + + + L R+ P+ LVLAPTRELA QI +E KF SQ+
Sbjct: 441 PSIVHINAQPVL-----------REDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNT 489
Query: 177 CV 178
CV
Sbjct: 490 CV 491
>UNIPROTKB|J3KRZ1 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270
PROSITE:PS00039 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC009994
HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000577787 Uniprot:J3KRZ1
Length = 166
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 70/124 (56%), Positives = 89/124 (71%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A ++ +L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 6 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 65
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 66 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 121
Query: 305 KEIQ 308
KE++
Sbjct: 122 KEVR 125
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 217 (81.4 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 51/122 (41%), Positives = 77/122 (63%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVL PTRELA QI ++ + ++ V+ GG + Q L + H+++ATPGRL+D
Sbjct: 96 LVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLID 155
Query: 248 MLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
LE K L ++LV+DEADR+L+M FE ++ I++ +PR DR+T +FSAT K+
Sbjct: 156 HLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKV--IPR--DRKTFLFSATMTKK 211
Query: 307 IQ 308
+Q
Sbjct: 212 VQ 213
Score = 163 (62.4 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 41/102 (40%), Positives = 60/102 (58%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D+ +T+++ + KPT +Q AIP+ + GRD++ A+TGSGKT AF +PILN
Sbjct: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDE 164
+ E TP +++F LVL PTRELA QI ++
Sbjct: 86 LLE-----TP---------QRLF--ALVLTPTRELAFQISEQ 111
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 334 (122.6 bits), Expect = 7.3e-30, P = 7.3e-30
Identities = 70/124 (56%), Positives = 89/124 (71%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A ++ +L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 89 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 148
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 149 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 204
Query: 305 KEIQ 308
KE++
Sbjct: 205 KEVR 208
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 229 (85.7 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 54/131 (41%), Positives = 77/131 (58%)
Query: 179 VRKKVFPLGLVLAPTRELATQIYDEAKKFA-YRSQLRPCVVYGGSNVGDQMRDLDRGCHL 237
V + P LVLAPTRELA Q+ + +A + +YGG ++ Q+ L RG +
Sbjct: 68 VTSQTTPQILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRGPQV 127
Query: 238 LVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTL 297
+V TPGR++D + RG + L + LVLDEAD ML MGF I I+ E+ P+ RQ
Sbjct: 128 IVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDIEWIL-EHTPPQ---RQLA 183
Query: 298 MFSATFPKEIQ 308
+FSAT P++I+
Sbjct: 184 LFSATMPEQIK 194
Score = 133 (51.9 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 23/61 (37%), Positives = 43/61 (70%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F ++ ++E + + Y+KPTP+Q +I +++G+D++ AQTG+GKT AF +P+LN+
Sbjct: 8 FRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNK 67
Query: 123 M 123
+
Sbjct: 68 V 68
Score = 59 (25.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 146 PLGLVLAPTRELATQIYDEAKKFA 169
P LVLAPTRELA Q+ + +A
Sbjct: 74 PQILVLAPTRELAVQVAEAFSSYA 97
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 334 (122.6 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 70/124 (56%), Positives = 89/124 (71%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A ++ +L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 227
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 228 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 283
Query: 305 KEIQ 308
KE++
Sbjct: 284 KEVR 287
Score = 144 (55.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 76 IALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAG 135
IA + +PT +Q PV +SG D++ AQTGSGKT ++L+P + + + P G
Sbjct: 109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ---PFLERG 165
Query: 136 RGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G P+ LVLAPTRELA Q+ A ++ +L+ C+
Sbjct: 166 DG--------PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCI 201
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 334 (122.6 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 70/124 (56%), Positives = 89/124 (71%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A ++ +L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 227
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 228 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 283
Query: 305 KEIQ 308
KE++
Sbjct: 284 KEVR 287
Score = 144 (55.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 76 IALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAG 135
IA + +PT +Q PV +SG D++ AQTGSGKT ++L+P + + + P G
Sbjct: 109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ---PFLERG 165
Query: 136 RGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G P+ LVLAPTRELA Q+ A ++ +L+ C+
Sbjct: 166 DG--------PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCI 201
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 334 (122.6 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 70/124 (56%), Positives = 89/124 (71%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A ++ +L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 227
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 228 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 283
Query: 305 KEIQ 308
KE++
Sbjct: 284 KEVR 287
Score = 144 (55.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 76 IALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAG 135
IA + +PT +Q PV +SG D++ AQTGSGKT ++L+P + + + P G
Sbjct: 109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ---PFLERG 165
Query: 136 RGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G P+ LVLAPTRELA Q+ A ++ +L+ C+
Sbjct: 166 DG--------PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCI 201
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 334 (122.6 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 70/124 (56%), Positives = 89/124 (71%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A ++ +L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 227
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 228 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 283
Query: 305 KEIQ 308
KE++
Sbjct: 284 KEVR 287
Score = 144 (55.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 76 IALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAG 135
IA + +PT +Q PV +SG D++ AQTGSGKT ++L+P + + + P G
Sbjct: 109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ---PFLERG 165
Query: 136 RGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G P+ LVLAPTRELA Q+ A ++ +L+ C+
Sbjct: 166 DG--------PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCI 201
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 334 (122.6 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 70/124 (56%), Positives = 89/124 (71%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A ++ +L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 227
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 228 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 283
Query: 305 KEIQ 308
KE++
Sbjct: 284 KEVR 287
Score = 144 (55.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 76 IALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAG 135
IA + +PT +Q PV +SG D++ AQTGSGKT ++L+P + + + P G
Sbjct: 109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ---PFLERG 165
Query: 136 RGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G P+ LVLAPTRELA Q+ A ++ +L+ C+
Sbjct: 166 DG--------PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCI 201
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 334 (122.6 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 70/124 (56%), Positives = 89/124 (71%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A ++ +L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 227
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 228 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 283
Query: 305 KEIQ 308
KE++
Sbjct: 284 KEVR 287
Score = 144 (55.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 76 IALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAG 135
IA + +PT +Q PV +SG D++ AQTGSGKT ++L+P + + + P G
Sbjct: 109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ---PFLERG 165
Query: 136 RGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G P+ LVLAPTRELA Q+ A ++ +L+ C+
Sbjct: 166 DG--------PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCI 201
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 334 (122.6 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 70/124 (56%), Positives = 89/124 (71%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A ++ +L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 227
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 228 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 283
Query: 305 KEIQ 308
KE++
Sbjct: 284 KEVR 287
Score = 144 (55.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 76 IALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAG 135
IA + +PT +Q PV +SG D++ AQTGSGKT ++L+P + + + P G
Sbjct: 109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ---PFLERG 165
Query: 136 RGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G P+ LVLAPTRELA Q+ A ++ +L+ C+
Sbjct: 166 DG--------PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCI 201
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 216 (81.1 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 51/122 (41%), Positives = 77/122 (63%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVL PTRELA QI ++ + ++ V+ GG + Q L + H+++ATPGRL+D
Sbjct: 122 LVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIVIATPGRLID 181
Query: 248 MLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
LE K L ++LV+DEADR+L+M FE ++ I++ +PR DR+T +FSAT K+
Sbjct: 182 HLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKV--IPR--DRKTFLFSATMTKK 237
Query: 307 IQ 308
+Q
Sbjct: 238 VQ 239
Score = 163 (62.4 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 41/102 (40%), Positives = 60/102 (58%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D+ +T+++ + KPT +Q AIP+ + GRD++ A+TGSGKT AF +PILN
Sbjct: 52 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 111
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDE 164
+ E TP +++F LVL PTRELA QI ++
Sbjct: 112 LLE-----TP---------QRLF--ALVLTPTRELAFQISEQ 137
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 334 (122.6 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 70/124 (56%), Positives = 89/124 (71%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A ++ +L+ +YGG+ G Q+RDL+RG + +ATPGR
Sbjct: 225 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 284
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 285 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 340
Query: 305 KEIQ 308
KE++
Sbjct: 341 KEVR 344
Score = 144 (55.7 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 76 IALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAG 135
IA + +PT +Q PV +SG D++ AQTGSGKT ++L+P + + + P G
Sbjct: 166 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ---PFLERG 222
Query: 136 RGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G P+ LVLAPTRELA Q+ A ++ +L+ C+
Sbjct: 223 DG--------PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCI 258
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 214 (80.4 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 51/122 (41%), Positives = 77/122 (63%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVL PTRELA QI ++ + ++ V+ GG + Q L + H+++ATPGRL+D
Sbjct: 95 LVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLID 154
Query: 248 MLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
LE K L ++LV+DEADR+L+M FE ++ I++ +PR DR+T +FSAT K+
Sbjct: 155 HLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKV--IPR--DRKTFLFSATMTKK 210
Query: 307 IQ 308
+Q
Sbjct: 211 VQ 212
Score = 163 (62.4 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 41/102 (40%), Positives = 60/102 (58%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D+ +T+++ + KPT +Q AIP+ + GRD++ A+TGSGKT AF +PILN
Sbjct: 25 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 84
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDE 164
+ E TP +++F LVL PTRELA QI ++
Sbjct: 85 LLE-----TP---------QRLF--ALVLTPTRELAFQISEQ 110
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 214 (80.4 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 51/122 (41%), Positives = 77/122 (63%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVL PTRELA QI ++ + ++ V+ GG + Q L + H+++ATPGRL+D
Sbjct: 98 LVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLID 157
Query: 248 MLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
LE K L ++LV+DEADR+L+M FE ++ I++ +PR DR+T +FSAT K+
Sbjct: 158 HLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKV--IPR--DRKTFLFSATMTKK 213
Query: 307 IQ 308
+Q
Sbjct: 214 VQ 215
Score = 163 (62.4 bits), Expect = 2.5e-29, Sum P(2) = 2.5e-29
Identities = 41/102 (40%), Positives = 60/102 (58%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D+ +T+++ + KPT +Q AIP+ + GRD++ A+TGSGKT AF +PILN
Sbjct: 28 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 87
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDE 164
+ E TP +++F LVL PTRELA QI ++
Sbjct: 88 LLE-----TP---------QRLF--ALVLTPTRELAFQISEQ 113
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 214 (80.4 bits), Expect = 3.1e-29, Sum P(2) = 3.1e-29
Identities = 51/122 (41%), Positives = 77/122 (63%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVL PTRELA QI ++ + ++ V+ GG + Q L + H+++ATPGRL+D
Sbjct: 96 LVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLID 155
Query: 248 MLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
LE K L ++LV+DEADR+L+M FE ++ I++ +PR DR+T +FSAT K+
Sbjct: 156 HLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKV--IPR--DRKTFLFSATMTKK 211
Query: 307 IQ 308
+Q
Sbjct: 212 VQ 213
Score = 162 (62.1 bits), Expect = 3.1e-29, Sum P(2) = 3.1e-29
Identities = 41/102 (40%), Positives = 60/102 (58%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D+ +T+++ + KPT +Q AIP+ + GRD++ A+TGSGKT AF +PILN
Sbjct: 26 FKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDE 164
+ E TP +++F LVL PTRELA QI ++
Sbjct: 86 LLE-----TP---------QRLF--ALVLTPTRELAFQISEQ 111
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 214 (80.4 bits), Expect = 3.1e-29, Sum P(2) = 3.1e-29
Identities = 51/122 (41%), Positives = 77/122 (63%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVL PTRELA QI ++ + ++ V+ GG + Q L + H+++ATPGRL+D
Sbjct: 96 LVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLALAKKPHIVIATPGRLID 155
Query: 248 MLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
LE K L ++LV+DEADR+L+M FE ++ I++ +PR DR+T +FSAT K+
Sbjct: 156 HLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKV--IPR--DRKTFLFSATMTKK 211
Query: 307 IQ 308
+Q
Sbjct: 212 VQ 213
Score = 162 (62.1 bits), Expect = 3.1e-29, Sum P(2) = 3.1e-29
Identities = 41/102 (40%), Positives = 60/102 (58%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D+ +T+++ + KPT +Q AIP+ + GRD++ A+TGSGKT AF +PILN
Sbjct: 26 FKDLGVTDVLCEACDQLGWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDE 164
+ E TP +++F LVL PTRELA QI ++
Sbjct: 86 LLE-----TP---------QRLF--ALVLTPTRELAFQISEQ 111
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 221 (82.9 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 53/122 (43%), Positives = 76/122 (62%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVL PTRELA QI ++ + + V+ GG + Q L + H+++ATPGRLVD
Sbjct: 97 LVLTPTRELAFQISEQFEALGSSIGVHSAVIVGGIDSMSQSLALAKKPHIIIATPGRLVD 156
Query: 248 MLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
LE K L +FLV+DEADR+L+M FE ++ I++ +PR DR+T +FSAT K+
Sbjct: 157 HLENTKGFNLRALKFLVMDEADRILNMDFETEVDKILKV--IPR--DRKTFLFSATMTKQ 212
Query: 307 IQ 308
+Q
Sbjct: 213 VQ 214
Score = 148 (57.2 bits), Expect = 3.3e-29, Sum P(2) = 3.3e-29
Identities = 39/102 (38%), Positives = 57/102 (55%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D+ +T+++ + PT +Q AIPV + GRD++ A+TGSGKT AF +PIL
Sbjct: 27 FKDLGVTDVLCEACDQLGWKVPTKIQVEAIPVALQGRDIIGLAETGSGKTGAFALPILQA 86
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDE 164
+ L P +++F LVL PTRELA QI ++
Sbjct: 87 L-----LDAP---------QRLF--ALVLTPTRELAFQISEQ 112
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 241 (89.9 bits), Expect = 5.1e-29, Sum P(2) = 5.1e-29
Identities = 52/122 (42%), Positives = 75/122 (61%)
Query: 188 LVLAPTRELATQIYDEAKKFAYR-SQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLV 246
LVL PTRELA Q+ + + ++ + GG +G Q+ L+ G H+LV TPGR++
Sbjct: 76 LVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRIL 135
Query: 247 DMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
D L + +I L+ LVLDEADRML+MGF+ + I+ P +RQTL+FSAT+P
Sbjct: 136 DHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIA--AAP--AERQTLLFSATYPAS 191
Query: 307 IQ 308
I+
Sbjct: 192 IE 193
Score = 108 (43.1 bits), Expect = 5.1e-29, Sum P(2) = 5.1e-29
Identities = 31/87 (35%), Positives = 47/87 (54%)
Query: 75 NIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPA 134
N+ + TP+Q ++P I+ G+DV+ +TGSGKTAAF + +L+ + +
Sbjct: 18 NLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLSNLNVK-------- 69
Query: 135 GRGYPSRKKVFPLGLVLAPTRELATQI 161
R +V LVL PTRELA Q+
Sbjct: 70 ------RFRV--QALVLCPTRELADQV 88
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 329 (120.9 bits), Expect = 5.1e-29, P = 5.1e-29
Identities = 70/124 (56%), Positives = 88/124 (70%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA Q+ A ++ +L+ +YGG+ G Q+RDL+RG +ATPGR
Sbjct: 168 PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVENCIATPGR 227
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D LE GK L +LVLDEADRMLDMGFEPQIR IV + P DRQTLM+SAT+P
Sbjct: 228 LIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWP 283
Query: 305 KEIQ 308
KE++
Sbjct: 284 KEVR 287
Score = 144 (55.7 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 76 IALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAG 135
IA + +PT +Q PV +SG D++ AQTGSGKT ++L+P + + + P G
Sbjct: 109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ---PFLERG 165
Query: 136 RGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G P+ LVLAPTRELA Q+ A ++ +L+ C+
Sbjct: 166 DG--------PICLVLAPTRELAQQVQQVAAEYCRACRLKSTCI 201
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 333 (122.3 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 101/309 (32%), Positives = 152/309 (49%)
Query: 3 YESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLPLPPQ 62
Y+ NG G+ + +A R + P GRN L P
Sbjct: 140 YQKPNNGAGVAGGYQSNNYNAAALGMLSKEERAEIQREKAKNP--GRNLVKPKWENLEPF 197
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
D I N LA+ ++ + + + +SG ++ S + ++ ++ +
Sbjct: 198 LKDFY--NIHPNT--LAKSEQQVAEIRRELEITVSGNELPH--PVVSFEESSLPAHVIEE 251
Query: 123 MYERG-PLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVRK 181
M +G PT +G+P L + +A T T Y +Q P ++R
Sbjct: 252 MKRQGFTKPTAIQSQGWPIALSGRDL-VGIAQTGSGKTLAYMLPAIVHIGNQ--PPIIRG 308
Query: 182 KVFPLGLVLAPTRELATQIYDEAKKFAY--RSQLRPCVVYGGSNVGDQMRDLDRGCHLLV 239
+ P+ LVLAPTRELA QI + + + + ++R ++GGS+ Q RDLDRG +++
Sbjct: 309 EG-PIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVII 367
Query: 240 ATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMF 299
ATPGRL+D LE L C +LVLDEADRMLDMGFEPQIR I+++ P DRQ +M+
Sbjct: 368 ATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI-RP---DRQVVMW 423
Query: 300 SATFPKEIQ 308
SAT+PKE+Q
Sbjct: 424 SATWPKEVQ 432
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 334 (122.6 bits), Expect = 5.7e-29, P = 5.7e-29
Identities = 87/191 (45%), Positives = 114/191 (59%)
Query: 119 ILNQMYERG-PLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPC 177
IL ++ G P PTP + +P + + + +A T T Y F LR C
Sbjct: 446 ILRELLSAGFPSPTPIQAQTWPIALQSRDI-VAIAKTGSGKTLGY-LIPAFIL---LRHC 500
Query: 178 VVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHL 237
+ P L+LAPTRELATQI DEA +F S++ +YGG+ G Q+++L+RG +
Sbjct: 501 RNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADI 560
Query: 238 LVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTL 297
+VATPGRL D+LE I LVLDEADRMLDMGFEPQIR IV E PR RQTL
Sbjct: 561 VVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIP-PR---RQTL 616
Query: 298 MFSATFPKEIQ 308
M++AT+PKE++
Sbjct: 617 MYTATWPKEVR 627
Score = 157 (60.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 41/119 (34%), Positives = 61/119 (51%)
Query: 57 LPLPP-QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P F+ + I + A + PTP+Q P+ + RD++A A+TGSGKT +
Sbjct: 430 IPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGY 489
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
L+P + R + + P L+LAPTRELATQI DEA +F S++
Sbjct: 490 LIPAFILL------------RHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRI 536
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 215 (80.7 bits), Expect = 6.3e-29, Sum P(2) = 6.3e-29
Identities = 53/123 (43%), Positives = 74/123 (60%)
Query: 187 GLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLV 246
GLVLAPTRELA QI + +R V+ GG ++ Q L + H++VATPGRL+
Sbjct: 117 GLVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDMVAQSIALGKKPHIIVATPGRLL 176
Query: 247 DMLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPK 305
D LE K L N ++L +DEADR+LDM F + I++ +PRT R T +FSAT
Sbjct: 177 DHLENTKGFSLRNLKYLAIDEADRLLDMDFGESLDKIIRI--LPRT--RHTYLFSATMST 232
Query: 306 EIQ 308
+++
Sbjct: 233 KVE 235
Score = 158 (60.7 bits), Expect = 6.3e-29, Sum P(2) = 6.3e-29
Identities = 43/105 (40%), Positives = 59/105 (56%)
Query: 58 PLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P + F ++ + + + Y PTP+Q AIP+ + GRDV+ A+TGSGKTAAF
Sbjct: 42 PAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFA 101
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
+P+L + E P + +F GLVLAPTRELA QI
Sbjct: 102 LPMLQALME-AP-------------QTLF--GLVLAPTRELAYQI 130
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 198 (74.8 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 47/123 (38%), Positives = 73/123 (59%)
Query: 188 LVLAPTRELATQIYDEAKKFAYR-SQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLV 246
++L PTRELA Q+Y+ KK ++ + L + GG N+ Q L +++ATPGRL+
Sbjct: 203 IILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLI 262
Query: 247 DMLERG-KIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPK 305
D + + + + LV+DEADRML+ GF+ ++ I+ +P+ RQTL+FSAT
Sbjct: 263 DHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEILSL--IPKH-KRQTLLFSATMNT 319
Query: 306 EIQ 308
IQ
Sbjct: 320 RIQ 322
Score = 186 (70.5 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 49/160 (30%), Positives = 82/160 (51%)
Query: 18 GLDLSAKKESAPGSNPRVYVPPHLRN--QPSGGRNSTDTFLLPLPPQ-----FDDIQMTE 70
G+ S ++E V VP ++ +P + F PQ F +Q++
Sbjct: 81 GMGASKQEEEEEEEEEEVEVP-EVKEVVEPEDSAEAIADFYEESSPQQTHTSFQTLQLSR 139
Query: 71 IITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLP 130
+ IA ++ KPTP+Q +IP+ + G+D++A AQTGSGKT A+++PI+ ++ +
Sbjct: 140 PVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTS 199
Query: 131 TPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAY 170
T KV ++L PTRELA Q+Y+ KK ++
Sbjct: 200 T-----------KV----IILTPTRELALQVYEFGKKLSH 224
Score = 54 (24.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 8/35 (22%), Positives = 22/35 (62%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVY 219
P+ +++ P + +A+++ + + R QL+P ++Y
Sbjct: 332 PVRIMIDPPKSVASKLLQQFVRIRKRDQLKPALLY 366
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 198 (74.8 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 47/123 (38%), Positives = 73/123 (59%)
Query: 188 LVLAPTRELATQIYDEAKKFAYR-SQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLV 246
++L PTRELA Q+Y+ KK ++ + L + GG N+ Q L +++ATPGRL+
Sbjct: 203 IILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQLKTRPDIVIATPGRLI 262
Query: 247 DMLERG-KIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPK 305
D + + + + LV+DEADRML+ GF+ ++ I+ +P+ RQTL+FSAT
Sbjct: 263 DHIRNSPSFSVQDIQVLVIDEADRMLEEGFQDELTEILSL--IPKH-KRQTLLFSATMNT 319
Query: 306 EIQ 308
IQ
Sbjct: 320 RIQ 322
Score = 186 (70.5 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 49/160 (30%), Positives = 82/160 (51%)
Query: 18 GLDLSAKKESAPGSNPRVYVPPHLRN--QPSGGRNSTDTFLLPLPPQ-----FDDIQMTE 70
G+ S ++E V VP ++ +P + F PQ F +Q++
Sbjct: 81 GMGASKQEEEEEEEEEEVEVP-EVKEVVEPEDSAEAIADFYEESSPQQTHTSFQTLQLSR 139
Query: 71 IITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLP 130
+ IA ++ KPTP+Q +IP+ + G+D++A AQTGSGKT A+++PI+ ++ +
Sbjct: 140 PVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIERLLYKPSTS 199
Query: 131 TPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAY 170
T KV ++L PTRELA Q+Y+ KK ++
Sbjct: 200 T-----------KV----IILTPTRELALQVYEFGKKLSH 224
Score = 54 (24.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 8/35 (22%), Positives = 22/35 (62%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVY 219
P+ +++ P + +A+++ + + R QL+P ++Y
Sbjct: 332 PVRIMIDPPKSVASKLLQQFVRIRKRDQLKPALLY 366
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 323 (118.8 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 67/124 (54%), Positives = 88/124 (70%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P LVL PTRELA Q+ + + F + L+ ++GG++ G Q RDL+RG ++VATPGR
Sbjct: 203 PAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGR 262
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D L+ G + C +LVLDEADRMLDMGFEPQI+ I+ G R DRQTLMFSAT+P
Sbjct: 263 LLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKII---GQIRP-DRQTLMFSATWP 318
Query: 305 KEIQ 308
KE++
Sbjct: 319 KEVR 322
Score = 145 (56.1 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 39/120 (32%), Positives = 66/120 (55%)
Query: 57 LPLPP-QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P +F++ + I + + ++ KPT +Q + P+ +SGRD+++ A+TGSGKT AF
Sbjct: 125 VPRPVFEFNEAPLPGQI-HELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAF 183
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
++P L + ++ G G P LVL PTRELA Q+ + + F + L+
Sbjct: 184 MLPALVHITKQAHRQR---GEG--------PAVLVLLPTRELAQQVQEVSIDFCHSLGLK 232
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 324 (119.1 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 70/124 (56%), Positives = 91/124 (73%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P LVL+PTRELATQI EA KF S++ +YGG+ G Q+++++RG ++VATPGR
Sbjct: 302 PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGR 361
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L D+LE +I L +LVLDEADRMLDMGFEPQIR IV E +P RQTLM++AT+P
Sbjct: 362 LNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNE--VPTK--RQTLMYTATWP 417
Query: 305 KEIQ 308
KE++
Sbjct: 418 KEVR 421
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 36/96 (37%), Positives = 55/96 (57%)
Query: 79 ARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGY 138
A + P+P+Q + P+ + RD++A A+TGSGKT +L+P + +R
Sbjct: 247 AGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHL-QR-----------I 294
Query: 139 PSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+ ++ P LVL+PTRELATQI EA KF S++
Sbjct: 295 HNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKI 330
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 306 (112.8 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 63/127 (49%), Positives = 87/127 (68%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
PL +++ PTRELA QI E KKF+ LR VYGG+ + +Q+ +L RG ++V TPGR
Sbjct: 431 PLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 490
Query: 245 LVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
++DML G++ L ++V+DEADRM DMGFEPQ+ IV +N P DRQT+MFSA
Sbjct: 491 MIDMLGANNGRVTNLRRVTYVVIDEADRMFDMGFEPQVMRIV-DNVRP---DRQTVMFSA 546
Query: 302 TFPKEIQ 308
TFP+ ++
Sbjct: 547 TFPRTME 553
Score = 197 (74.4 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 46/108 (42%), Positives = 64/108 (59%)
Query: 72 ITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPT 131
+ N + Y+KPTP+Q AIP I+SGRD++ A+TGSGKT AFL+P+ + ++ P+
Sbjct: 368 VLNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGE 427
Query: 132 PPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G PL +++ PTRELA QI E KKF+ LR CV
Sbjct: 428 ---AEG--------PLAVIMTPTRELALQITKECKKFSKSLALRVVCV 464
Score = 47 (21.6 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRN 43
M Y S + L+ L G +K P + ++ P +N
Sbjct: 277 MEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHQKIQYEPFRKN 319
>WB|WBGene00001600 [details] [associations]
symbol:glh-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0043186 "P granule" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA helicase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 322 (118.4 bits), Expect = 4.7e-28, P = 4.7e-28
Identities = 64/126 (50%), Positives = 84/126 (66%)
Query: 184 FPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
+P ++L PTRELA QIY+E +KF+Y+S + VYGG NVG + +GC ++V T G
Sbjct: 375 YPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIG 434
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLD-MGFEPQIRCIVQENGMPRTGDRQTLMFSAT 302
R+ E G I L CR+LVLDEADRM+D MGF P+I I+ MP+ RQT+MFSAT
Sbjct: 435 RVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSAT 494
Query: 303 FPKEIQ 308
FP +Q
Sbjct: 495 FPSSVQ 500
Score = 243 (90.6 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 47/116 (40%), Positives = 76/116 (65%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D + + + N+ A Y + TP+Q+Y +P++ G+D++ACAQTGSGKTAAFL+PI+++
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRS--QLRP 176
+ L Y + +P ++L PTRELA QIY+E +KF+Y+S +++P
Sbjct: 360 LILEKDL-------NYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKP 408
>UNIPROTKB|O01836 [details] [associations]
symbol:glh-3 "ATP-dependent RNA helicase glh-3"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 322 (118.4 bits), Expect = 4.7e-28, P = 4.7e-28
Identities = 64/126 (50%), Positives = 84/126 (66%)
Query: 184 FPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
+P ++L PTRELA QIY+E +KF+Y+S + VYGG NVG + +GC ++V T G
Sbjct: 375 YPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGTIG 434
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLD-MGFEPQIRCIVQENGMPRTGDRQTLMFSAT 302
R+ E G I L CR+LVLDEADRM+D MGF P+I I+ MP+ RQT+MFSAT
Sbjct: 435 RVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKNMPKNDKRQTMMFSAT 494
Query: 303 FPKEIQ 308
FP +Q
Sbjct: 495 FPSSVQ 500
Score = 243 (90.6 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 47/116 (40%), Positives = 76/116 (65%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D + + + N+ A Y + TP+Q+Y +P++ G+D++ACAQTGSGKTAAFL+PI+++
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRS--QLRP 176
+ L Y + +P ++L PTRELA QIY+E +KF+Y+S +++P
Sbjct: 360 LILEKDL-------NYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKP 408
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 226 (84.6 bits), Expect = 5.4e-28, Sum P(2) = 5.4e-28
Identities = 54/103 (52%), Positives = 67/103 (65%)
Query: 206 KFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLD 265
KF S C + G S G ++ L + + +ATPGR +D LE GK L C +LVLD
Sbjct: 188 KFKCSSLFWVCFL-GQSLKGQRLEWLSQCVEICIATPGR-IDFLESGKTNLRRCTYLVLD 245
Query: 266 EADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
EADRMLDMGFEPQIR IV + P DRQTLM+SAT+PKE++
Sbjct: 246 EADRMLDMGFEPQIRKIVDQI-RP---DRQTLMWSATWPKEVR 284
Score = 121 (47.7 bits), Expect = 5.4e-28, Sum P(2) = 5.4e-28
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL----NQMY-ERGPLP 130
+ +PTP+Q P+ +SGRD++ AQTGSGKT A+L+P + +Q Y ERG P
Sbjct: 112 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGP 166
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 322 (118.4 bits), Expect = 5.4e-28, P = 5.4e-28
Identities = 66/124 (53%), Positives = 88/124 (70%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+G++ APTRELA QI+ EAKKF+ LR VYGG + +Q ++L GC ++VATPGR
Sbjct: 302 PIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGR 361
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+DML+ + + +LVLDEADRM D+GFEPQ+R IV G R DRQTL+FSAT P
Sbjct: 362 LIDMLKMKALTMMRASYLVLDEADRMFDLGFEPQVRSIV---GQIRP-DRQTLLFSATMP 417
Query: 305 KEIQ 308
+++
Sbjct: 418 WKVE 421
Score = 204 (76.9 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 48/117 (41%), Positives = 71/117 (60%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F+D + I + I Y+KPT +Q A+P+++SGRDV+ A+TGSGKTAAF++P++
Sbjct: 230 FEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVH 289
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
+ ++ P G P+G++ APTRELA QI+ EAKKF+ LR V
Sbjct: 290 IMDQ---PELQRDEG--------PIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAV 335
>TAIR|locus:2098886 [details] [associations]
symbol:AT3G61240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0006397 GO:GO:0003723
EMBL:AL137898 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AJ010464 EMBL:AY120712 EMBL:BT000038 IPI:IPI00548726
PIR:T47916 PIR:T51743 RefSeq:NP_191683.1 RefSeq:NP_974472.1
UniGene:At.20236 ProteinModelPortal:Q9M2E0 SMR:Q9M2E0 STRING:Q9M2E0
PaxDb:Q9M2E0 PRIDE:Q9M2E0 EnsemblPlants:AT3G61240.1
EnsemblPlants:AT3G61240.2 GeneID:825296 KEGG:ath:AT3G61240
GeneFarm:928 TAIR:At3g61240 InParanoid:Q9M2E0 OMA:PLAMDQR
PhylomeDB:Q9M2E0 ProtClustDB:CLSN2683443 Genevestigator:Q9M2E0
GermOnline:AT3G61240 Uniprot:Q9M2E0
Length = 498
Score = 222 (83.2 bits), Expect = 7.5e-28, Sum P(2) = 7.5e-28
Identities = 47/121 (38%), Positives = 76/121 (62%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
++L PTRELA Q K+ + ++ V GG+++ D + L + HLLV TPGR++D
Sbjct: 196 MILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILD 255
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
+ ++G L +C LV+DEAD++L F+P + ++Q +P+ +RQ LMFSATFP +
Sbjct: 256 LTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQF--LPQ--NRQFLMFSATFPVTV 311
Query: 308 Q 308
+
Sbjct: 312 K 312
Score = 135 (52.6 bits), Expect = 7.5e-28, Sum P(2) = 7.5e-28
Identities = 36/129 (27%), Positives = 63/129 (48%)
Query: 41 LRNQPSGGRNSTDTFLLPLPPQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRD 100
LR P R T +F+D + + I ++KP+P+Q+ +IP+ ++G D
Sbjct: 104 LRLPPPDTRYQTADVTATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSD 163
Query: 101 VMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQ 160
++A A+ G+GKT AF +P+L ++ P+ + ++L PTRELA Q
Sbjct: 164 ILARAKNGTGKTGAFCIPVLEKID--------------PNNNVI--QAMILVPTRELALQ 207
Query: 161 IYDEAKKFA 169
K+ +
Sbjct: 208 TSQVCKELS 216
>TAIR|locus:2050715 [details] [associations]
symbol:AT2G45810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006417 GO:GO:0006397
GO:GO:0003723 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC004665 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF ProtClustDB:CLSN2683443 EMBL:AY039862
EMBL:BT002709 EMBL:AJ010459 IPI:IPI00528597 PIR:T02466 PIR:T51740
RefSeq:NP_182105.1 UniGene:At.46 ProteinModelPortal:Q94BV4
SMR:Q94BV4 IntAct:Q94BV4 STRING:Q94BV4 PaxDb:Q94BV4 PRIDE:Q94BV4
EnsemblPlants:AT2G45810.1 GeneID:819189 KEGG:ath:AT2G45810
GeneFarm:917 TAIR:At2g45810 InParanoid:Q94BV4 PhylomeDB:Q94BV4
Genevestigator:Q94BV4 GermOnline:AT2G45810 Uniprot:Q94BV4
Length = 528
Score = 223 (83.6 bits), Expect = 8.1e-28, Sum P(2) = 8.1e-28
Identities = 48/121 (39%), Positives = 76/121 (62%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
++L PTRELA Q K+ + ++ V GG+++ D + L + HLLV TPGR++D
Sbjct: 226 VILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHLLVGTPGRILD 285
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
+ ++G L +C LV+DEAD++L + F+P I ++Q +P + RQ LMFSATFP +
Sbjct: 286 LAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQF--LPES--RQILMFSATFPVTV 341
Query: 308 Q 308
+
Sbjct: 342 K 342
Score = 132 (51.5 bits), Expect = 8.1e-28, Sum P(2) = 8.1e-28
Identities = 35/129 (27%), Positives = 62/129 (48%)
Query: 41 LRNQPSGGRNSTDTFLLPLPPQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRD 100
L+ P R T+ +F+D + + I ++KP+P+Q+ +IP+ ++G D
Sbjct: 134 LKLPPRDNRYQTEDVTATKGNEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSD 193
Query: 101 VMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQ 160
++A A+ G+GKT AF +P L ++ P + ++L PTRELA Q
Sbjct: 194 ILARAKNGTGKTGAFCIPTLEKID--------------PENNVI--QAVILVPTRELALQ 237
Query: 161 IYDEAKKFA 169
K+ +
Sbjct: 238 TSQVCKELS 246
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 307 (113.1 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 65/124 (52%), Positives = 83/124 (66%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+GL+LAPTREL+ QIY+EAKKF L YGG + +Q + L++G ++VATPGR
Sbjct: 343 PIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPGR 402
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
++DM++ L FLVLDEADRM MGFEPQ+R I + P DRQ LMFSATF
Sbjct: 403 MIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICN-HVRP---DRQCLMFSATFK 458
Query: 305 KEIQ 308
K I+
Sbjct: 459 KRIE 462
Score = 216 (81.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 51/115 (44%), Positives = 70/115 (60%)
Query: 58 PLPPQ----FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTA 113
P PP+ F E + + A Y +PTP+Q A+P +SGRD++ A+TGSGKTA
Sbjct: 262 PSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTA 321
Query: 114 AFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKF 168
AF+ P+L + ++ L P G G P+GL+LAPTREL+ QIY+EAKKF
Sbjct: 322 AFIWPMLMHVMDQKQLK-P--GDG--------PIGLILAPTRELSLQIYNEAKKF 365
Score = 38 (18.4 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 4 ESNQNGTGLEQQLAGLDLSAKKE 26
+S+ + LEQ +AG++ +KE
Sbjct: 127 DSDSDEDPLEQFMAGINQQVEKE 149
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 305 (112.4 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 63/127 (49%), Positives = 87/127 (68%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTRELA QI E KKF+ LR VYGG+ + +Q+ +L RG ++V TPGR
Sbjct: 445 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 504
Query: 245 LVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
++DML G++ L ++VLDEADRM DMGFEPQ+ IV +N P DRQT+MFSA
Sbjct: 505 MIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIV-DNVRP---DRQTVMFSA 560
Query: 302 TFPKEIQ 308
TFP+ ++
Sbjct: 561 TFPRAME 567
Score = 191 (72.3 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 44/99 (44%), Positives = 61/99 (61%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
Y+KPTP+Q AIP I++GRD++ A+TGSGKT AFL+P+ + ++ L G G
Sbjct: 391 YEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRALEE---GEG--- 444
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
P+ +++ PTRELA QI E KKF+ LR CV
Sbjct: 445 -----PIAVIMTPTRELALQITKECKKFSKTLGLRVVCV 478
Score = 43 (20.2 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRN 43
M Y S + L+ L G +K P + ++ P +N
Sbjct: 291 MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKN 333
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 304 (112.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 63/127 (49%), Positives = 87/127 (68%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTRELA QI E KKF+ LR VYGG+ + +Q+ +L RG ++V TPGR
Sbjct: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 245 LVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
++DML G++ L ++VLDEADRM DMGFEPQ+ IV +N P DRQT+MFSA
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIV-DNVRP---DRQTVMFSA 561
Query: 302 TFPKEIQ 308
TFP+ ++
Sbjct: 562 TFPRAME 568
Score = 198 (74.8 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 47/108 (43%), Positives = 65/108 (60%)
Query: 72 ITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPT 131
I N++ Y+KPTP+Q AIP I+SGRD++ A+TGSGKT AFL+P+ + ++ L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 132 PPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G G P+ +++ PTRELA QI E KKF+ LR CV
Sbjct: 443 ---GEG--------PIAVIMTPTRELALQITKECKKFSKTLGLRVVCV 479
Score = 43 (20.2 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRN 43
M Y S + L+ L G +K P + ++ P +N
Sbjct: 292 MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKN 334
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 304 (112.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 63/127 (49%), Positives = 87/127 (68%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTRELA QI E KKF+ LR VYGG+ + +Q+ +L RG ++V TPGR
Sbjct: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 245 LVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
++DML G++ L ++VLDEADRM DMGFEPQ+ IV +N P DRQT+MFSA
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIV-DNVRP---DRQTVMFSA 561
Query: 302 TFPKEIQ 308
TFP+ ++
Sbjct: 562 TFPRAME 568
Score = 198 (74.8 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 47/108 (43%), Positives = 65/108 (60%)
Query: 72 ITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPT 131
I N++ Y+KPTP+Q AIP I+SGRD++ A+TGSGKT AFL+P+ + ++ L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 132 PPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G G P+ +++ PTRELA QI E KKF+ LR CV
Sbjct: 443 ---GEG--------PIAVIMTPTRELALQITKECKKFSKTLGLRVVCV 479
Score = 43 (20.2 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRN 43
M Y S + L+ L G +K P + ++ P +N
Sbjct: 292 MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKN 334
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 304 (112.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 63/127 (49%), Positives = 87/127 (68%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTRELA QI E KKF+ LR VYGG+ + +Q+ +L RG ++V TPGR
Sbjct: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 245 LVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
++DML G++ L ++VLDEADRM DMGFEPQ+ IV +N P DRQT+MFSA
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIV-DNVRP---DRQTVMFSA 561
Query: 302 TFPKEIQ 308
TFP+ ++
Sbjct: 562 TFPRAME 568
Score = 198 (74.8 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 47/108 (43%), Positives = 65/108 (60%)
Query: 72 ITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPT 131
I N++ Y+KPTP+Q AIP I+SGRD++ A+TGSGKT AFL+P+ + ++ L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 132 PPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G G P+ +++ PTRELA QI E KKF+ LR CV
Sbjct: 443 ---GEG--------PIAVIMTPTRELALQITKECKKFSKTLGLRVVCV 479
Score = 43 (20.2 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRN 43
M Y S + L+ L G +K P + ++ P +N
Sbjct: 292 MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKN 334
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 304 (112.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 63/127 (49%), Positives = 87/127 (68%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTRELA QI E KKF+ LR VYGG+ + +Q+ +L RG ++V TPGR
Sbjct: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 245 LVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
++DML G++ L ++VLDEADRM DMGFEPQ+ IV +N P DRQT+MFSA
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIV-DNVRP---DRQTVMFSA 561
Query: 302 TFPKEIQ 308
TFP+ ++
Sbjct: 562 TFPRAME 568
Score = 198 (74.8 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 47/108 (43%), Positives = 65/108 (60%)
Query: 72 ITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPT 131
I N++ Y+KPTP+Q AIP I+SGRD++ A+TGSGKT AFL+P+ + ++ L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 132 PPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G G P+ +++ PTRELA QI E KKF+ LR CV
Sbjct: 443 ---GEG--------PIAVIMTPTRELALQITKECKKFSKTLGLRVVCV 479
Score = 43 (20.2 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRN 43
M Y S + L+ L G +K P + ++ P +N
Sbjct: 292 MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKN 334
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 304 (112.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 63/127 (49%), Positives = 87/127 (68%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTRELA QI E KKF+ LR VYGG+ + +Q+ +L RG ++V TPGR
Sbjct: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 245 LVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
++DML G++ L ++VLDEADRM DMGFEPQ+ IV +N P DRQT+MFSA
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIV-DNVRP---DRQTVMFSA 561
Query: 302 TFPKEIQ 308
TFP+ ++
Sbjct: 562 TFPRAME 568
Score = 198 (74.8 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 47/108 (43%), Positives = 65/108 (60%)
Query: 72 ITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPT 131
I N++ Y+KPTP+Q AIP I+SGRD++ A+TGSGKT AFL+P+ + ++ L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 132 PPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G G P+ +++ PTRELA QI E KKF+ LR CV
Sbjct: 443 ---GEG--------PIAVIMTPTRELALQITKECKKFSKTLGLRVVCV 479
Score = 43 (20.2 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRN 43
M Y S + L+ L G +K P + ++ P +N
Sbjct: 292 MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKN 334
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 304 (112.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 63/127 (49%), Positives = 87/127 (68%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTRELA QI E KKF+ LR VYGG+ + +Q+ +L RG ++V TPGR
Sbjct: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 245 LVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
++DML G++ L ++VLDEADRM DMGFEPQ+ IV +N P DRQT+MFSA
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIV-DNVRP---DRQTVMFSA 561
Query: 302 TFPKEIQ 308
TFP+ ++
Sbjct: 562 TFPRAME 568
Score = 198 (74.8 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 47/108 (43%), Positives = 65/108 (60%)
Query: 72 ITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPT 131
I N++ Y+KPTP+Q AIP I+SGRD++ A+TGSGKT AFL+P+ + ++ L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 132 PPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G G P+ +++ PTRELA QI E KKF+ LR CV
Sbjct: 443 ---GEG--------PIAVIMTPTRELALQITKECKKFSKTLGLRVVCV 479
Score = 43 (20.2 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRN 43
M Y S + L+ L G +K P + ++ P +N
Sbjct: 292 MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKN 334
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 304 (112.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 63/127 (49%), Positives = 87/127 (68%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTRELA QI E KKF+ LR VYGG+ + +Q+ +L RG ++V TPGR
Sbjct: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 245 LVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
++DML G++ L ++VLDEADRM DMGFEPQ+ IV +N P DRQT+MFSA
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIV-DNVRP---DRQTVMFSA 561
Query: 302 TFPKEIQ 308
TFP+ ++
Sbjct: 562 TFPRAME 568
Score = 198 (74.8 bits), Expect = 3.9e-13, Sum P(2) = 3.9e-13
Identities = 47/108 (43%), Positives = 65/108 (60%)
Query: 72 ITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPT 131
I N++ Y+KPTP+Q AIP I+SGRD++ A+TGSGKT AFL+P+ + ++ L
Sbjct: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
Query: 132 PPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
G G P+ +++ PTRELA QI E KKF+ LR CV
Sbjct: 443 ---GEG--------PIAVIMTPTRELALQITKECKKFSKTLGLRVVCV 479
Score = 43 (20.2 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRN 43
M Y S + L+ L G +K P + ++ P +N
Sbjct: 292 MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKN 334
>TAIR|locus:2159517 [details] [associations]
symbol:PDE340 "PIGMENT DEFECTIVE 340" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010474
IPI:IPI00522710 PIR:T51747 RefSeq:NP_196478.2 UniGene:At.32551
ProteinModelPortal:Q9FNM7 SMR:Q9FNM7 STRING:Q9FNM7 PaxDb:Q9FNM7
PRIDE:Q9FNM7 EnsemblPlants:AT5G08610.1 GeneID:830762
KEGG:ath:AT5G08610 GeneFarm:949 TAIR:At5g08610 InParanoid:Q9FNM7
OMA:GRNDRNV PhylomeDB:Q9FNM7 ProtClustDB:CLSN2918084
Genevestigator:Q9FNM7 GermOnline:AT5G08610 Uniprot:Q9FNM7
Length = 850
Score = 205 (77.2 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 53/126 (42%), Positives = 71/126 (56%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YRSQLRPCVVYGGSNVGDQMRDLDRG-CHLLVATPGRL 245
LV+ PTRELA+Q EA Y + VV GG+ + + R + C +LVATPGRL
Sbjct: 462 LVVCPTRELASQAAAEANTLLKYHPSIGVQVVIGGTKLPTEQRRMQTNPCQILVATPGRL 521
Query: 246 VDMLERGK---IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSAT 302
D +E L + LVLDEAD +LDMGF I I+ +P+ RQT +FSAT
Sbjct: 522 KDHIENTSGFATRLMGVKVLVLDEADHLLDMGFRRDIERIIA--AVPK--QRQTFLFSAT 577
Query: 303 FPKEIQ 308
P+E++
Sbjct: 578 VPEEVR 583
Score = 168 (64.2 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
Identities = 45/124 (36%), Positives = 73/124 (58%)
Query: 43 NQPSGGRNST-DTFLLPLPPQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDV 101
++P+G T D++L +FD ++ + I A ++ T VQ+ +P+I+ G+DV
Sbjct: 365 DKPTGEHVKTSDSYLSKT--RFDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDV 422
Query: 102 MACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
+A A+TG+GKT AFL+P + + + +PPA R SR+ + LV+ PTRELA+Q
Sbjct: 423 LAKAKTGTGKTVAFLLPAIEAV-----IKSPPASRD--SRQPPI-IVLVVCPTRELASQA 474
Query: 162 YDEA 165
EA
Sbjct: 475 AAEA 478
>ASPGD|ASPL0000044206 [details] [associations]
symbol:AN1949 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001307
GO:GO:0003723 EMBL:AACD01000029 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_659553.1
ProteinModelPortal:Q5BBY1 STRING:Q5BBY1
EnsemblFungi:CADANIAT00008609 GeneID:2875602 KEGG:ani:AN1949.2
OrthoDB:EOG4ZKNVS Uniprot:Q5BBY1
Length = 609
Score = 214 (80.4 bits), Expect = 5.4e-27, Sum P(2) = 5.4e-27
Identities = 50/123 (40%), Positives = 80/123 (65%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
+V++PTRELA QI+ A++ +V GG+N + L +G +LL+ATPGRL+D
Sbjct: 204 IVVSPTRELALQIFGVARELLTAHSQTYGIVIGGANRRAEAEKLTKGVNLLIATPGRLLD 263
Query: 248 MLER--GKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPK 305
L+ G + N + LV+DEADR+L++GFE ++R I++ +P DRQT++FSAT
Sbjct: 264 HLQNTPGFV-FKNLKTLVIDEADRILEVGFEDEMRQIIKI--LPNE-DRQTMLFSATQTT 319
Query: 306 EIQ 308
+++
Sbjct: 320 KVE 322
Score = 146 (56.5 bits), Expect = 5.4e-27, Sum P(2) = 5.4e-27
Identities = 42/122 (34%), Positives = 65/122 (53%)
Query: 51 STDTFLLPLP---PQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQ 106
S D LP P P+ F ++ ++E I ++ T +Q+ IP +++GRDV+ A+
Sbjct: 114 SVDAVSLPQPDGGPKKFTELGLSEKTLQGIKEMGFETMTEIQQRTIPPLLAGRDVLGAAK 173
Query: 107 TGSGKTAAFLVPILNQMYERGPLPTPPA-GRGYPSRKKVFPLGLVLAPTRELATQIYDEA 165
TGSGKT AFL+P + + L P G G +V++PTRELA QI+ A
Sbjct: 174 TGSGKTLAFLIPAIEML---SALRFKPRNGTGV----------IVVSPTRELALQIFGVA 220
Query: 166 KK 167
++
Sbjct: 221 RE 222
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 214 (80.4 bits), Expect = 5.4e-27, Sum P(2) = 5.4e-27
Identities = 50/122 (40%), Positives = 77/122 (63%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVL PTRELA QI ++ ++ V+ GG ++ Q L + H+++ATPGRL+D
Sbjct: 151 LVLTPTRELAFQIAEQFDALGSSIGVKTAVIVGGIDMMSQALVLAKKPHVVIATPGRLID 210
Query: 248 MLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
+E K L ++LV+DEADR+L+M FE ++ I++ +PR DR+T +FSAT K+
Sbjct: 211 HMENTKGFNLRALKYLVMDEADRILNMDFESEVDKILKV--IPR--DRRTFLFSATMTKK 266
Query: 307 IQ 308
+Q
Sbjct: 267 VQ 268
Score = 143 (55.4 bits), Expect = 5.4e-27, Sum P(2) = 5.4e-27
Identities = 40/102 (39%), Positives = 55/102 (53%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F ++ +TE++ + KPT +Q AIPV + GRDV+ A+TGSGKT AF VP+L
Sbjct: 81 FKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFAVPVLQS 140
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDE 164
+ A R + LVL PTRELA QI ++
Sbjct: 141 LLAC-------AQRLHT---------LVLTPTRELAFQIAEQ 166
>DICTYBASE|DDB_G0284017 [details] [associations]
symbol:ddx10 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0284017 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000153_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AAFI02000059 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HSSP:P26196 RefSeq:XP_638786.1 ProteinModelPortal:Q54Q94
STRING:Q54Q94 PRIDE:Q54Q94 EnsemblProtists:DDB0234197
GeneID:8624375 KEGG:ddi:DDB_G0284017 OMA:AMNILIA Uniprot:Q54Q94
Length = 878
Score = 218 (81.8 bits), Expect = 5.5e-27, Sum P(2) = 5.5e-27
Identities = 56/122 (45%), Positives = 75/122 (61%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
+VL+PTRELA QI+D K ++ GG NV Q +D ++L+ATPGRL+
Sbjct: 217 IVLSPTRELAIQIFDVLKAVGKYHTFSAGLIIGGRNV-QQEKDKINAMNILIATPGRLLQ 275
Query: 248 -MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
M E +N + LVLDEADR+LD+GF + IV EN +PR +RQTL+FSAT K
Sbjct: 276 HMDETYGFDCSNLKILVLDEADRILDLGFSKCLNSIV-EN-LPR--ERQTLLFSATQTKS 331
Query: 307 IQ 308
I+
Sbjct: 332 IR 333
Score = 144 (55.7 bits), Expect = 5.5e-27, Sum P(2) = 5.5e-27
Identities = 36/109 (33%), Positives = 61/109 (55%)
Query: 58 PLPPQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
P F D+ ++++ + +++ K T +Q+ ++P + GRD++ A+TGSGKT +F++
Sbjct: 138 PSATDFKDLPISQLTLKALTESKFLKLTDIQRASLPHTLCGRDILGAAKTGSGKTLSFIL 197
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAK 166
PIL ++ R G G +VL+PTRELA QI+D K
Sbjct: 198 PILETLW-RNRWGRDD-GIG----------AIVLSPTRELAIQIFDVLK 234
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 312 (114.9 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 64/126 (50%), Positives = 82/126 (65%)
Query: 184 FPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
+P ++L PTRELA QIY+E +KFAY++ + VYGG VG +++G ++V T G
Sbjct: 418 YPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVG 477
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLD-MGFEPQIRCIVQENGMPRTGDRQTLMFSAT 302
R+ E G I L CRF VLDEADRM+D MGF I IV + MPR +RQTLMFSAT
Sbjct: 478 RIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSAT 537
Query: 303 FPKEIQ 308
FP +Q
Sbjct: 538 FPDSVQ 543
Score = 269 (99.8 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 54/112 (48%), Positives = 77/112 (68%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F + +TE + N+A A Y K TP+Q+YA+P++ G D+MACAQTGSGKTAAFL+PI+ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+ + L T AG G +P ++L PTRELA QIY+E +KFAY++ +
Sbjct: 403 LIDDNNLNT--AGEG-----GCYPRCIILTPTRELADQIYNEGRKFAYQTMM 447
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 312 (114.9 bits), Expect = 6.5e-27, P = 6.5e-27
Identities = 64/126 (50%), Positives = 82/126 (65%)
Query: 184 FPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
+P ++L PTRELA QIY+E +KFAY++ + VYGG VG +++G ++V T G
Sbjct: 418 YPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVG 477
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLD-MGFEPQIRCIVQENGMPRTGDRQTLMFSAT 302
R+ E G I L CRF VLDEADRM+D MGF I IV + MPR +RQTLMFSAT
Sbjct: 478 RIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMPRKENRQTLMFSAT 537
Query: 303 FPKEIQ 308
FP +Q
Sbjct: 538 FPDSVQ 543
Score = 269 (99.8 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 54/112 (48%), Positives = 77/112 (68%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F + +TE + N+A A Y K TP+Q+YA+P++ G D+MACAQTGSGKTAAFL+PI+ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQL 174
+ + L T AG G +P ++L PTRELA QIY+E +KFAY++ +
Sbjct: 403 LIDDNNLNT--AGEG-----GCYPRCIILTPTRELADQIYNEGRKFAYQTMM 447
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 306 (112.8 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 68/124 (54%), Positives = 85/124 (68%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA QI E KF+ S++R YGG Q+ L +G H+L+A PGR
Sbjct: 187 PIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGR 246
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D+LE+ L +LVLDEAD+MLDMGFE QIR IV + P DRQTLM+SAT+P
Sbjct: 247 LIDLLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQI-RP---DRQTLMWSATWP 302
Query: 305 KEIQ 308
KE+Q
Sbjct: 303 KEVQ 306
Score = 162 (62.1 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 44/113 (38%), Positives = 61/113 (53%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D + + NNI PTP+Q P+ +SG+D++ A+TGSGKT AF++P
Sbjct: 120 FPDYVIKSLKNNNIVA-----PTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVH 174
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
+ + P G G P+ LVLAPTRELA QI E KF+ S++R
Sbjct: 175 ILAQ---PNLKYGDG--------PIVLVLAPTRELAEQIRQECIKFSTESKIR 216
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 306 (112.8 bits), Expect = 9.3e-27, P = 9.3e-27
Identities = 68/124 (54%), Positives = 85/124 (68%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ LVLAPTRELA QI E KF+ S++R YGG Q+ L +G H+L+A PGR
Sbjct: 187 PIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGR 246
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D+LE+ L +LVLDEAD+MLDMGFE QIR IV + P DRQTLM+SAT+P
Sbjct: 247 LIDLLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQI-RP---DRQTLMWSATWP 302
Query: 305 KEIQ 308
KE+Q
Sbjct: 303 KEVQ 306
Score = 162 (62.1 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 44/113 (38%), Positives = 61/113 (53%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D + + NNI PTP+Q P+ +SG+D++ A+TGSGKT AF++P
Sbjct: 120 FPDYVIKSLKNNNIVA-----PTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVH 174
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
+ + P G G P+ LVLAPTRELA QI E KF+ S++R
Sbjct: 175 ILAQ---PNLKYGDG--------PIVLVLAPTRELAEQIRQECIKFSTESKIR 216
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 213 (80.0 bits), Expect = 9.9e-27, Sum P(2) = 9.9e-27
Identities = 48/120 (40%), Positives = 69/120 (57%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L+LAPTRELATQI ++ GG+NV + R L+ GCH++V TPGR+ D
Sbjct: 102 LILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVGTPGRVYD 161
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
M+ R + + VLDEAD ML GF+ QI+ + + +P D Q ++ SAT P ++
Sbjct: 162 MINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKM--LPP--DVQVILLSATMPPDV 217
Score = 137 (53.3 bits), Expect = 9.9e-27, Sum P(2) = 9.9e-27
Identities = 40/99 (40%), Positives = 57/99 (57%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
FDD+ + E + I ++KP+ +Q+ AI + GRDV+A AQ+G+GKTA F + IL Q
Sbjct: 32 FDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQ 91
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
+ T S ++ L+LAPTRELATQI
Sbjct: 92 ------IDT--------SIREC--QALILAPTRELATQI 114
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 312 (114.9 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 69/128 (53%), Positives = 90/128 (70%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCV-VYGGSNVGDQMRDLDRGCHLLVATPG 243
P+GLV+APTREL QIY + +KF+ + CV VYGGS V Q+ +L RG ++V TPG
Sbjct: 470 PIGLVMAPTRELVQQIYSDIRKFSKALGII-CVPVYGGSGVAQQISELKRGTEIVVCTPG 528
Query: 244 RLVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFS 300
R++D+L GKI L +LV+DEADRM DMGFEPQI IVQ N P DRQT++FS
Sbjct: 529 RMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQ-NIRP---DRQTVLFS 584
Query: 301 ATFPKEIQ 308
ATFP++++
Sbjct: 585 ATFPRQVE 592
Score = 213 (80.0 bits), Expect = 7.9e-15, P = 7.9e-15
Identities = 47/114 (41%), Positives = 70/114 (61%)
Query: 57 LPLPPQF-DDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P QF +T I + + Y+KP P+Q A+P+I+SGRD + A+TGSGKT F
Sbjct: 391 VPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGF 450
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFA 169
++P+L + ++ P+ AG G P+GLV+APTREL QIY + +KF+
Sbjct: 451 VLPMLRHIKDQPPVE---AGDG--------PIGLVMAPTRELVQQIYSDIRKFS 493
>TAIR|locus:2127043 [details] [associations]
symbol:RH8 "RNAhelicase-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016032 "viral reproduction" evidence=IMP] [GO:0019048
"virus-host interaction" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0019048 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 EMBL:AF058919 EMBL:AL161472
GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 OMA:QFMEKHL
ProtClustDB:CLSN2683443 EMBL:AJ010460 EMBL:AY080837 EMBL:AY113985
IPI:IPI00531108 PIR:T01230 PIR:T51741 RefSeq:NP_191975.2
RefSeq:NP_849535.1 UniGene:At.25593 UniGene:At.67100
UniGene:At.71300 ProteinModelPortal:Q8RXK6 SMR:Q8RXK6 STRING:Q8RXK6
PaxDb:Q8RXK6 PRIDE:Q8RXK6 EnsemblPlants:AT4G00660.1
EnsemblPlants:AT4G00660.2 GeneID:828042 KEGG:ath:AT4G00660
GeneFarm:919 TAIR:At4g00660 InParanoid:Q8RXK6 PhylomeDB:Q8RXK6
Genevestigator:Q8RXK6 GermOnline:AT4G00660 Uniprot:Q8RXK6
Length = 505
Score = 217 (81.4 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 45/121 (37%), Positives = 75/121 (61%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
+++ PTRELA Q K+ +++ V GG+++ D + L + HLLV TPGR++D
Sbjct: 203 VIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 262
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
+ ++G L +C LV+DEAD++L F+P + ++ + +P + RQ LMFSATFP +
Sbjct: 263 LTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLI--SFLPES--RQILMFSATFPVTV 318
Query: 308 Q 308
+
Sbjct: 319 K 319
Score = 134 (52.2 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 22/62 (35%), Positives = 44/62 (70%)
Query: 62 QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILN 121
+F+D + + I +++P+P+Q+ +IP+ ++GRD++A A+ G+GKTAAF +P+L
Sbjct: 132 EFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLE 191
Query: 122 QM 123
++
Sbjct: 192 KI 193
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 312 (114.9 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 68/128 (53%), Positives = 91/128 (71%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCV-VYGGSNVGDQMRDLDRGCHLLVATPG 243
P+GLV+APTREL QI+ + +KF+ +R CV VYGGS V Q+ +L RG ++V TPG
Sbjct: 603 PIGLVMAPTRELVQQIHSDIRKFSKPLGIR-CVPVYGGSGVAQQISELKRGTEIVVCTPG 661
Query: 244 RLVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFS 300
R++D+L GKI L FLV+DEADRM DMGFEPQI I+Q N P +RQT++FS
Sbjct: 662 RMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQ-NIRP---ERQTVLFS 717
Query: 301 ATFPKEIQ 308
ATFP++++
Sbjct: 718 ATFPRQVE 725
Score = 206 (77.6 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 48/123 (39%), Positives = 74/123 (60%)
Query: 57 LPLPPQF-DDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P +F +T I + + Y+KP P+Q A+P+I+SGRD + A+TGSGKT F
Sbjct: 524 VPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGF 583
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
++P+L + ++ P+ AG G P+GLV+APTREL QI+ + +KF+ +R
Sbjct: 584 VLPMLRHIKDQPPVE---AGDG--------PIGLVMAPTRELVQQIHSDIRKFSKPLGIR 632
Query: 176 PCV 178
CV
Sbjct: 633 -CV 634
>UNIPROTKB|C9J081 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0005737 GO:GO:0003676 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:2699 EMBL:AC004474
IPI:IPI00646152 HOGENOM:HOG000203858 ProteinModelPortal:C9J081
SMR:C9J081 STRING:C9J081 PRIDE:C9J081 Ensembl:ENST00000440554
ArrayExpress:C9J081 Bgee:C9J081 Uniprot:C9J081
Length = 250
Score = 238 (88.8 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 48/72 (66%), Positives = 55/72 (76%)
Query: 60 PPQ---FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
PP F DI M EII NI L RY +PTPVQK+AIP+I RD+MACAQTGSGKTAAFL
Sbjct: 171 PPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFL 230
Query: 117 VPILNQMYERGP 128
+PIL+Q+Y GP
Sbjct: 231 LPILSQIYTDGP 242
Score = 75 (31.5 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 15 QLAGLDLSAKKESAPGSNPRV--YVPPHLRN-QPSGGRNSTDT 54
+LA LDL+++K+S S Y+PPHLRN + S G + D+
Sbjct: 12 KLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDS 54
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 309 (113.8 bits), Expect = 2.4e-26, P = 2.4e-26
Identities = 61/127 (48%), Positives = 86/127 (67%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTRELA QI+ E K F +R C YGG+ + DQ+ DL RG ++V TPGR
Sbjct: 492 PIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAEIVVCTPGR 551
Query: 245 LVDMLER--GKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
++D+L G++ L C +LVLDEADRM D+GFEPQ+ I+ N P DRQT++FSA
Sbjct: 552 MIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIIN-NIRP---DRQTVLFSA 607
Query: 302 TFPKEIQ 308
TFP+ ++
Sbjct: 608 TFPRAME 614
Score = 202 (76.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 44/97 (45%), Positives = 59/97 (60%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
Y+KPT +Q AIP I SGRDV+ A+TGSGKT AFL+P+ + ++ PL T G G
Sbjct: 438 YEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKT---GEG--- 491
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPC 177
P+ +++ PTRELA QI+ E K F +R C
Sbjct: 492 -----PIAIIMTPTRELAVQIFRECKPFLKLLNIRAC 523
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 305 (112.4 bits), Expect = 7.8e-26, P = 7.8e-26
Identities = 64/126 (50%), Positives = 88/126 (69%)
Query: 186 LGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRL 245
+ L+++PTRELA QI+ E KKF+ LR VYGG+++ +Q+ +L RG ++V TPGR+
Sbjct: 584 IALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGRM 643
Query: 246 VDMLERGKIGLANCR---FLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSAT 302
+D+L + N R FLVLDEADRM DMGF PQI CIV ++ P DRQT+MFSAT
Sbjct: 644 IDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIV-DSIRP---DRQTIMFSAT 699
Query: 303 FPKEIQ 308
FP +++
Sbjct: 700 FPPKVE 705
Score = 180 (68.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 48/123 (39%), Positives = 70/123 (56%)
Query: 58 PLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P Q + +TE + + +Y+KPT +Q IP I++GRD++ A+TGSGKT AFL
Sbjct: 505 PKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFL 564
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
+P+ + + P P G G + L+++PTRELA QI+ E KKF+ LR
Sbjct: 565 LPMFRHILAQ-PKSAP--GEGM--------IALIMSPTRELALQIHVECKKFSKVLGLRT 613
Query: 177 -CV 178
CV
Sbjct: 614 ACV 616
>SGD|S000002319 [details] [associations]
symbol:DHH1 "Cytoplasmic DExD/H-box helicase, stimulates mRNA
decapping" species:4932 "Saccharomyces cerevisiae" [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IMP] [GO:0003724 "RNA helicase activity" evidence=IGI;ISS]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002319 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 EMBL:BK006938 GO:GO:0003723
GO:GO:0000753 GO:GO:0000932 EMBL:Z67750 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0034063 GO:GO:0008026 eggNOG:COG0513
GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000290 OrthoDB:EOG4QJVWF EMBL:X66057 EMBL:Z74208 PIR:S31229
RefSeq:NP_010121.1 PDB:1S2M PDBsum:1S2M ProteinModelPortal:P39517
SMR:P39517 DIP:DIP-1243N IntAct:P39517 MINT:MINT-385061
STRING:P39517 PaxDb:P39517 PeptideAtlas:P39517 EnsemblFungi:YDL160C
GeneID:851394 KEGG:sce:YDL160C CYGD:YDL160c
EvolutionaryTrace:P39517 NextBio:968552 Genevestigator:P39517
GermOnline:YDL160C Uniprot:P39517
Length = 506
Score = 196 (74.1 bits), Expect = 7.8e-26, Sum P(2) = 7.8e-26
Identities = 44/121 (36%), Positives = 69/121 (57%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L++ PTRELA Q + + V GG+N+ D + L+ H+LV TPGR++D
Sbjct: 118 LIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLD 177
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
+ R L++C ++DEAD+ML F+ I I+ + +P T Q+L+FSATFP +
Sbjct: 178 LASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQIL--SFLPPT--HQSLLFSATFPLTV 233
Query: 308 Q 308
+
Sbjct: 234 K 234
Score = 158 (60.7 bits), Expect = 7.8e-26, Sum P(2) = 7.8e-26
Identities = 41/112 (36%), Positives = 61/112 (54%)
Query: 49 RNSTDTFLLPLPPQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTG 108
R TD L F+D + + I A ++KP+P+Q+ AIPV I+GRD++A A+ G
Sbjct: 34 RPQTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNG 93
Query: 109 SGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQ 160
+GKTAAF++P L ++ P K+ L++ PTRELA Q
Sbjct: 94 TGKTAAFVIPTLEKVK--------------PKLNKI--QALIMVPTRELALQ 129
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 303 (111.7 bits), Expect = 8.2e-26, P = 8.2e-26
Identities = 62/128 (48%), Positives = 90/128 (70%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQ-LRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
P+GL+L+PTRELA QI E F R+ LR C YGGS++ +Q+ +L +G ++V TPG
Sbjct: 368 PIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPG 427
Query: 244 RLVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFS 300
R++D+L G++ L C F+VLDEADRM D+GFEPQ+ I+ + P DRQT++FS
Sbjct: 428 RVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQI-RP---DRQTVLFS 483
Query: 301 ATFPKEIQ 308
ATFP++++
Sbjct: 484 ATFPRKME 491
Score = 173 (66.0 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 39/99 (39%), Positives = 61/99 (61%)
Query: 80 RYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYP 139
+++KP+ +Q A+P I+SGRDV+ A+TGSGKT ++++P+L + ++
Sbjct: 313 KFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQ-----------QF 361
Query: 140 SRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ-LRPC 177
S+ P+GL+L+PTRELA QI E F R+ LR C
Sbjct: 362 SKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNLRVC 400
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 303 (111.7 bits), Expect = 8.2e-26, P = 8.2e-26
Identities = 62/128 (48%), Positives = 90/128 (70%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQ-LRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
P+GL+L+PTRELA QI E F R+ LR C YGGS++ +Q+ +L +G ++V TPG
Sbjct: 368 PIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTPG 427
Query: 244 RLVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFS 300
R++D+L G++ L C F+VLDEADRM D+GFEPQ+ I+ + P DRQT++FS
Sbjct: 428 RVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQI-RP---DRQTVLFS 483
Query: 301 ATFPKEIQ 308
ATFP++++
Sbjct: 484 ATFPRKME 491
Score = 173 (66.0 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 39/99 (39%), Positives = 61/99 (61%)
Query: 80 RYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYP 139
+++KP+ +Q A+P I+SGRDV+ A+TGSGKT ++++P+L + ++
Sbjct: 313 KFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQ-----------QF 361
Query: 140 SRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ-LRPC 177
S+ P+GL+L+PTRELA QI E F R+ LR C
Sbjct: 362 SKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNLRVC 400
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 211 (79.3 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 53/122 (43%), Positives = 71/122 (58%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YRS-QLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRL 245
L+LAPTRELA QI Y + Q C+ GG+NVG+ +R LD G H++ TPGR+
Sbjct: 110 LILAPTRELAVQIQKGLLALGDYMNVQCHACI--GGTNVGEDIRKLDYGQHVVAGTPGRV 167
Query: 246 VDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPK 305
DM+ R + + LVLDEAD ML+ GF+ QI + + P T Q ++ SAT P
Sbjct: 168 FDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLP-PAT---QVVLISATLPH 223
Query: 306 EI 307
EI
Sbjct: 224 EI 225
Score = 131 (51.2 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 38/101 (37%), Positives = 54/101 (53%)
Query: 61 PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL 120
P FD + + E + I ++KP+ +Q+ AI II GRDV+A +Q+G+GKTA F + +L
Sbjct: 38 PTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL 97
Query: 121 NQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
Q + T L+LAPTRELA QI
Sbjct: 98 -QCLDIQVRETQ---------------ALILAPTRELAVQI 122
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 211 (79.3 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 53/122 (43%), Positives = 71/122 (58%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YRS-QLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRL 245
L+LAPTRELA QI Y + Q C+ GG+NVG+ +R LD G H++ TPGR+
Sbjct: 110 LILAPTRELAVQIQKGLLALGDYMNVQCHACI--GGTNVGEDIRKLDYGQHVVAGTPGRV 167
Query: 246 VDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPK 305
DM+ R + + LVLDEAD ML+ GF+ QI + + P T Q ++ SAT P
Sbjct: 168 FDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLP-PAT---QVVLISATLPH 223
Query: 306 EI 307
EI
Sbjct: 224 EI 225
Score = 131 (51.2 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 38/101 (37%), Positives = 54/101 (53%)
Query: 61 PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL 120
P FD + + E + I ++KP+ +Q+ AI II GRDV+A +Q+G+GKTA F + +L
Sbjct: 38 PTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL 97
Query: 121 NQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
Q + T L+LAPTRELA QI
Sbjct: 98 -QCLDIQVRETQ---------------ALILAPTRELAVQI 122
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 211 (79.3 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 53/122 (43%), Positives = 71/122 (58%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YRS-QLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRL 245
L+LAPTRELA QI Y + Q C+ GG+NVG+ +R LD G H++ TPGR+
Sbjct: 110 LILAPTRELAVQIQKGLLALGDYMNVQCHACI--GGTNVGEDIRKLDYGQHVVAGTPGRV 167
Query: 246 VDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPK 305
DM+ R + + LVLDEAD ML+ GF+ QI + + P T Q ++ SAT P
Sbjct: 168 FDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLP-PAT---QVVLISATLPH 223
Query: 306 EI 307
EI
Sbjct: 224 EI 225
Score = 131 (51.2 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 38/101 (37%), Positives = 54/101 (53%)
Query: 61 PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL 120
P FD + + E + I ++KP+ +Q+ AI II GRDV+A +Q+G+GKTA F + +L
Sbjct: 38 PTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL 97
Query: 121 NQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
Q + T L+LAPTRELA QI
Sbjct: 98 -QCLDIQVRETQ---------------ALILAPTRELAVQI 122
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 211 (79.3 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 53/122 (43%), Positives = 71/122 (58%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YRS-QLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRL 245
L+LAPTRELA QI Y + Q C+ GG+NVG+ +R LD G H++ TPGR+
Sbjct: 110 LILAPTRELAVQIQKGLLALGDYMNVQCHACI--GGTNVGEDIRKLDYGQHVVAGTPGRV 167
Query: 246 VDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPK 305
DM+ R + + LVLDEAD ML+ GF+ QI + + P T Q ++ SAT P
Sbjct: 168 FDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLP-PAT---QVVLISATLPH 223
Query: 306 EI 307
EI
Sbjct: 224 EI 225
Score = 131 (51.2 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 38/101 (37%), Positives = 54/101 (53%)
Query: 61 PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL 120
P FD + + E + I ++KP+ +Q+ AI II GRDV+A +Q+G+GKTA F + +L
Sbjct: 38 PTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL 97
Query: 121 NQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
Q + T L+LAPTRELA QI
Sbjct: 98 -QCLDIQVRETQ---------------ALILAPTRELAVQI 122
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 211 (79.3 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 53/122 (43%), Positives = 71/122 (58%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YRS-QLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRL 245
L+LAPTRELA QI Y + Q C+ GG+NVG+ +R LD G H++ TPGR+
Sbjct: 110 LILAPTRELAVQIQKGLLALGDYMNVQCHACI--GGTNVGEDIRKLDYGQHVVAGTPGRV 167
Query: 246 VDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPK 305
DM+ R + + LVLDEAD ML+ GF+ QI + + P T Q ++ SAT P
Sbjct: 168 FDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLP-PAT---QVVLISATLPH 223
Query: 306 EI 307
EI
Sbjct: 224 EI 225
Score = 131 (51.2 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 38/101 (37%), Positives = 54/101 (53%)
Query: 61 PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL 120
P FD + + E + I ++KP+ +Q+ AI II GRDV+A +Q+G+GKTA F + +L
Sbjct: 38 PTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL 97
Query: 121 NQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
Q + T L+LAPTRELA QI
Sbjct: 98 -QCLDIQVRETQ---------------ALILAPTRELAVQI 122
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 211 (79.3 bits), Expect = 9.9e-26, Sum P(2) = 9.9e-26
Identities = 53/122 (43%), Positives = 71/122 (58%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YRS-QLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRL 245
L+LAPTRELA QI Y + Q C+ GG+NVG+ +R LD G H++ TPGR+
Sbjct: 111 LILAPTRELAVQIQKGLLALGDYMNVQCHACI--GGTNVGEDIRKLDYGQHVVAGTPGRV 168
Query: 246 VDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPK 305
DM+ R + + LVLDEAD ML+ GF+ QI + + P T Q ++ SAT P
Sbjct: 169 FDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLP-PAT---QVVLISATLPH 224
Query: 306 EI 307
EI
Sbjct: 225 EI 226
Score = 131 (51.2 bits), Expect = 9.9e-26, Sum P(2) = 9.9e-26
Identities = 38/101 (37%), Positives = 54/101 (53%)
Query: 61 PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL 120
P FD + + E + I ++KP+ +Q+ AI II GRDV+A +Q+G+GKTA F + +L
Sbjct: 39 PTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVL 98
Query: 121 NQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
Q + T L+LAPTRELA QI
Sbjct: 99 -QCLDIQVRETQ---------------ALILAPTRELAVQI 123
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 293 (108.2 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 60/122 (49%), Positives = 86/122 (70%)
Query: 188 LVLAPTRELATQIYDEAKKFAYR-SQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLV 246
LVL PTRELA Q+ E + A ++ + GG +G Q+ L+ G H++V TPGR+V
Sbjct: 73 LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAHIIVGTPGRIV 132
Query: 247 DMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
D L+R ++ L+N LVLDEADRML+MGF+PQ+ I++++ PR +RQTL+FSATFP++
Sbjct: 133 DHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQS--PR--ERQTLLFSATFPEQ 188
Query: 307 IQ 308
IQ
Sbjct: 189 IQ 190
Score = 134 (52.2 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 36/108 (33%), Positives = 59/108 (54%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F +++ + N++ Y++ TP+Q ++P I++G DV+ +TGSGKTAAF + +LN+
Sbjct: 3 FSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNK 62
Query: 123 M-YERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFA 169
+ +R + T LVL PTRELA Q+ E + A
Sbjct: 63 LDVKRFRIQT-----------------LVLCPTRELADQVAQEIRTLA 93
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 293 (108.2 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 60/122 (49%), Positives = 86/122 (70%)
Query: 188 LVLAPTRELATQIYDEAKKFAYR-SQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLV 246
LVL PTRELA Q+ E + A ++ + GG +G Q+ L+ G H++V TPGR+V
Sbjct: 73 LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAHIIVGTPGRIV 132
Query: 247 DMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
D L+R ++ L+N LVLDEADRML+MGF+PQ+ I++++ PR +RQTL+FSATFP++
Sbjct: 133 DHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQS--PR--ERQTLLFSATFPEQ 188
Query: 307 IQ 308
IQ
Sbjct: 189 IQ 190
Score = 134 (52.2 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 36/108 (33%), Positives = 59/108 (54%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F +++ + N++ Y++ TP+Q ++P I++G DV+ +TGSGKTAAF + +LN+
Sbjct: 3 FSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNK 62
Query: 123 M-YERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFA 169
+ +R + T LVL PTRELA Q+ E + A
Sbjct: 63 LDVKRFRIQT-----------------LVLCPTRELADQVAQEIRTLA 93
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 299 (110.3 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 96/321 (29%), Positives = 157/321 (48%)
Query: 4 ESNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTF--LLPLPP 61
E Q GT +E + S+ + G ++ L + S S TF L+ +
Sbjct: 117 ELQQGGTIIENDVN----SSNNNNNNGEENKIKEEKRLDMEESDILKSLKTFKPLVSVKD 172
Query: 62 QFDDIQMTEIITNNIALARY-----DKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
+ D+ T+ I N RY +K + + +I G D+ T K
Sbjct: 173 RAKDVIYTDSIKTNWRAPRYILERDEKDHQKVRDQLNIITDGEDIPPPITTF--KEMKIP 230
Query: 117 VPILNQMYERG-PLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYD-EAKKFAYRSQL 174
P+++ + E+G P+P +G P + + +A T T ++ FA +
Sbjct: 231 KPVIDVLLEKGIKKPSPIQVQGLPVILSGRDM-IGIAYTGSGKTLVFTLPMVLFALEEEC 289
Query: 175 RPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFA---YRS----QLRPCVVYGGSNVGDQ 227
+ +++ + P GL+L P+RELA Q YD F +++ QLR + GG ++ +Q
Sbjct: 290 KLPIIQGEG-PFGLILCPSRELARQTYDLVNSFTNALHKNGGHPQLRTLLAIGGIDLREQ 348
Query: 228 MRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENG 287
+G H+++ATPGRL+D+L + KI C++L LDEADR++D+GFE IR ++ +N
Sbjct: 349 EHIFKKGVHMIIATPGRLLDLLNKKKINFKLCKYLGLDEADRLIDLGFEDDIRSVL-DNF 407
Query: 288 MPRTGDRQTLMFSATFPKEIQ 308
T RQTL+FSAT PK+IQ
Sbjct: 408 ---TNQRQTLLFSATMPKKIQ 425
>WB|WBGene00001599 [details] [associations]
symbol:glh-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 302 (111.4 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 62/126 (49%), Positives = 80/126 (63%)
Query: 184 FPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
+P ++L PTREL QIY+E +KFAY++ + VYGG VG +++G ++V T G
Sbjct: 629 YPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVG 688
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLD-MGFEPQIRCIVQENGMPRTGDRQTLMFSAT 302
R+ E G I L CRF VLDEADRM+D MGF I IV MP+ +RQTLMFSAT
Sbjct: 689 RIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSAT 748
Query: 303 FPKEIQ 308
FP +Q
Sbjct: 749 FPDSVQ 754
Score = 262 (97.3 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 54/116 (46%), Positives = 77/116 (66%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F + + E + N+A A Y K TP+Q+Y +P+I G D+MACAQTGSGKTAAFL+PI+ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRS--QLRP 176
+ + L T AG G +P ++L PTREL QIY+E +KFAY++ ++RP
Sbjct: 614 LIDENDLNT--AGEG-----GCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRP 662
>UNIPROTKB|Q966L9 [details] [associations]
symbol:glh-2 "ATP-dependent RNA helicase glh-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 302 (111.4 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 62/126 (49%), Positives = 80/126 (63%)
Query: 184 FPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
+P ++L PTREL QIY+E +KFAY++ + VYGG VG +++G ++V T G
Sbjct: 629 YPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVG 688
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLD-MGFEPQIRCIVQENGMPRTGDRQTLMFSAT 302
R+ E G I L CRF VLDEADRM+D MGF I IV MP+ +RQTLMFSAT
Sbjct: 689 RIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMPKKENRQTLMFSAT 748
Query: 303 FPKEIQ 308
FP +Q
Sbjct: 749 FPDSVQ 754
Score = 262 (97.3 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 54/116 (46%), Positives = 77/116 (66%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F + + E + N+A A Y K TP+Q+Y +P+I G D+MACAQTGSGKTAAFL+PI+ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRS--QLRP 176
+ + L T AG G +P ++L PTREL QIY+E +KFAY++ ++RP
Sbjct: 614 LIDENDLNT--AGEG-----GCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRP 662
>UNIPROTKB|F1LX16 [details] [associations]
symbol:F1LX16 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00949361
Ensembl:ENSRNOT00000004240 Uniprot:F1LX16
Length = 659
Score = 220 (82.5 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 54/122 (44%), Positives = 72/122 (59%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFA-YRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
P LVLAPTRELA Q+ +K F+ +L YGG+ G Q+ + G +LV TPG
Sbjct: 141 PQVLVLAPTRELANQV---SKDFSDITKKLSVACFYGGTPYGGQIERMRSGIDILVGTPG 197
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDR-QTLMFSAT 302
R+ D L+ GK+ L + +VLDE D+MLDMGF Q+ I+ + D QTL+FSAT
Sbjct: 198 RIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSAT 257
Query: 303 FP 304
P
Sbjct: 258 CP 259
Score = 122 (48.0 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 40/140 (28%), Positives = 67/140 (47%)
Query: 26 ESAPG-SNPRVYVPPHLRNQPSGGRNSTDTFLLPLPPQ---FDDIQMTEIITNNIALARY 81
E +PG N + P + + G S +P+ + F + ++E +
Sbjct: 27 EKSPGLKNGLSHPKPDSSSTQAPGEESETEKEIPVEQKEGAFSNFPISEETVKLLKARGV 86
Query: 82 DKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSR 141
+ P+Q + SG+D++A A+TG+GKT +F +P++ ++ +G L GR
Sbjct: 87 NFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKL--QGGLQERKRGRA---- 140
Query: 142 KKVFPLGLVLAPTRELATQI 161
P LVLAPTRELA Q+
Sbjct: 141 ----PQVLVLAPTRELANQV 156
>ASPGD|ASPL0000036135 [details] [associations]
symbol:AN10417 species:162425 "Emericella nidulans"
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0030996 "cell
cycle arrest in response to nitrogen starvation" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001306 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:HIDPARF
EnsemblFungi:CADANIAT00009573 Uniprot:C8VHA5
Length = 498
Score = 199 (75.1 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 45/117 (38%), Positives = 66/117 (56%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L+L PTRELA Q K + V GG+ + D + L+ H+LV TPGR++D
Sbjct: 111 LILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHILVGTPGRVLD 170
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
+ +G L+ C V+DEAD++L F P I ++ + P+ DRQ ++FSATFP
Sbjct: 171 LASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSFH--PK--DRQVMLFSATFP 223
Score = 151 (58.2 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 39/113 (34%), Positives = 60/113 (53%)
Query: 48 GRNSTDTFLLPLPPQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQT 107
GR T+ +F+D + + I A ++KP+P+Q+ IPV ++GRD++A A+
Sbjct: 26 GRPQTEDVTATKGLEFEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKN 85
Query: 108 GSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQ 160
G+GKTAAF++P L ++ P K L+L PTRELA Q
Sbjct: 86 GTGKTAAFVIPTLERIN--------------PKSTKT--QALILVPTRELALQ 122
>UNIPROTKB|Q9NR30 [details] [associations]
symbol:DDX21 "Nucleolar RNA helicase 2" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:CH471083 GO:GO:0009615 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0043330 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:U41387 EMBL:AF261903 EMBL:AF261917 EMBL:AF261904 EMBL:AF261905
EMBL:AF261906 EMBL:AF261907 EMBL:AF261908 EMBL:AF261909
EMBL:AF261910 EMBL:AF261911 EMBL:AF261912 EMBL:AF261913
EMBL:AF261914 EMBL:AF261915 EMBL:AF261916 EMBL:AK315585
EMBL:CR749598 EMBL:AL359844 EMBL:BC008071 IPI:IPI00015953
IPI:IPI00477179 PIR:PC6010 RefSeq:NP_001243839.1 RefSeq:NP_004719.2
UniGene:Hs.223141 ProteinModelPortal:Q9NR30 SMR:Q9NR30
IntAct:Q9NR30 MINT:MINT-231639 STRING:Q9NR30 PhosphoSite:Q9NR30
DMDM:76803555 SWISS-2DPAGE:Q9NR30 PaxDb:Q9NR30 PeptideAtlas:Q9NR30
PRIDE:Q9NR30 DNASU:9188 Ensembl:ENST00000354185 GeneID:9188
KEGG:hsa:9188 UCSC:uc001jov.1 CTD:9188 GeneCards:GC10P070715
H-InvDB:HIX0008880 HGNC:HGNC:2744 HPA:HPA036592 MIM:606357
neXtProt:NX_Q9NR30 PharmGKB:PA27210 HOGENOM:HOG000268805
HOVERGEN:HBG051331 InParanoid:Q9NR30 OMA:EILCVAY OrthoDB:EOG46143T
PhylomeDB:Q9NR30 ChiTaRS:DDX21 GenomeRNAi:9188 NextBio:34453
ArrayExpress:Q9NR30 Bgee:Q9NR30 CleanEx:HS_DDX21
Genevestigator:Q9NR30 GermOnline:ENSG00000165732 Uniprot:Q9NR30
Length = 783
Score = 221 (82.9 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 53/122 (43%), Positives = 71/122 (58%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFA-YRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
P LVLAPTRELA Q+ +K F+ +L YGG+ G Q + G +LV TPG
Sbjct: 261 PQVLVLAPTRELANQV---SKDFSDITKKLSVACFYGGTPYGGQFERMRNGIDILVGTPG 317
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDR-QTLMFSAT 302
R+ D ++ GK+ L + +VLDE D+MLDMGF Q+ I+ + D QTL+FSAT
Sbjct: 318 RIKDHIQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSAT 377
Query: 303 FP 304
P
Sbjct: 378 CP 379
Score = 122 (48.0 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 86 PVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVF 145
P+Q + SG+D++A A+TG+GKT +F +P++ +++ G L GR
Sbjct: 211 PIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLH--GELQDRKRGRA-------- 260
Query: 146 PLGLVLAPTRELATQI 161
P LVLAPTRELA Q+
Sbjct: 261 PQVLVLAPTRELANQV 276
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 301 (111.0 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 61/127 (48%), Positives = 86/127 (67%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+GL++ PTRELATQI+ + K F LR YGG+ + DQ+ +L RG ++V TPGR
Sbjct: 615 PIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGR 674
Query: 245 LVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
++D+L G++ L ++VLDEADRM DMGFEPQ+ I+ N P DRQT++FSA
Sbjct: 675 MIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILS-NVRP---DRQTVLFSA 730
Query: 302 TFPKEIQ 308
TFP+ ++
Sbjct: 731 TFPRNME 737
Score = 177 (67.4 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 40/91 (43%), Positives = 54/91 (59%)
Query: 85 TPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKV 144
T +Q AIP I+SGRDV+ A+TGSGKT AFL+P+ + ++ PL
Sbjct: 565 TSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEG---------- 614
Query: 145 FPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
P+GL++ PTRELATQI+ + K F LR
Sbjct: 615 -PIGLIMTPTRELATQIHKDCKPFLKALNLR 644
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 301 (111.0 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 60/126 (47%), Positives = 88/126 (69%)
Query: 186 LGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRL 245
+ +++APTREL QI + +KF+ LRP VYGG+ + +Q+ +L RG ++V TPGR+
Sbjct: 585 IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRM 644
Query: 246 VDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSAT 302
+DML G++ L ++VLDEADRM DMGFEPQ+ I+ +N P DRQT+MFSAT
Sbjct: 645 IDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRII-DNVRP---DRQTVMFSAT 700
Query: 303 FPKEIQ 308
FP++++
Sbjct: 701 FPRQME 706
Score = 181 (68.8 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 41/99 (41%), Positives = 62/99 (62%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
++KPTP+Q AIP I+SGRD++ A+TGSGKT AF++P+ + ++ P+ G G
Sbjct: 530 FEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQ---PSMEDGDG--- 583
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP-CV 178
+ +++APTREL QI + +KF+ LRP CV
Sbjct: 584 -----AIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCV 617
>RGD|1307306 [details] [associations]
symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box helicase 21"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009615 "response to virus" evidence=ISO] [GO:0043330 "response
to exogenous dsRNA" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:1307306 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:BC105878 IPI:IPI00198801
RefSeq:NP_001032278.1 UniGene:Rn.162310 ProteinModelPortal:Q3B8Q1
STRING:Q3B8Q1 PhosphoSite:Q3B8Q1 PRIDE:Q3B8Q1
Ensembl:ENSRNOT00000068184 GeneID:317399 KEGG:rno:317399
UCSC:RGD:1307306 NextBio:671745 Genevestigator:Q3B8Q1
Uniprot:Q3B8Q1
Length = 782
Score = 220 (82.5 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 54/122 (44%), Positives = 72/122 (59%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFA-YRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
P LVLAPTRELA Q+ +K F+ +L YGG+ G Q+ + G +LV TPG
Sbjct: 257 PQVLVLAPTRELANQV---SKDFSDITKKLSVACFYGGTPYGGQIERMRSGIDILVGTPG 313
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDR-QTLMFSAT 302
R+ D L+ GK+ L + +VLDE D+MLDMGF Q+ I+ + D QTL+FSAT
Sbjct: 314 RIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSAT 373
Query: 303 FP 304
P
Sbjct: 374 CP 375
Score = 122 (48.0 bits), Expect = 2.7e-25, Sum P(2) = 2.7e-25
Identities = 40/140 (28%), Positives = 67/140 (47%)
Query: 26 ESAPG-SNPRVYVPPHLRNQPSGGRNSTDTFLLPLPPQ---FDDIQMTEIITNNIALARY 81
E +PG N + P + + G S +P+ + F + ++E +
Sbjct: 143 EKSPGLKNGLSHPKPDSSSTQAPGEESETEKEIPVEQKEGAFSNFPISEETVKLLKARGV 202
Query: 82 DKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSR 141
+ P+Q + SG+D++A A+TG+GKT +F +P++ ++ +G L GR
Sbjct: 203 NFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKL--QGGLQERKRGRA---- 256
Query: 142 KKVFPLGLVLAPTRELATQI 161
P LVLAPTRELA Q+
Sbjct: 257 ----PQVLVLAPTRELANQV 272
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 297 (109.6 bits), Expect = 4.2e-25, P = 4.2e-25
Identities = 63/127 (49%), Positives = 84/127 (66%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ ++LAPTRELA Q Y EA KFA L+ YGG + +Q+ DL RG ++V TPGR
Sbjct: 378 PIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCTPGR 437
Query: 245 LVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
++D+L GK+ L +LVLDEADRM D GFEPQI +V N P D+QT++FSA
Sbjct: 438 MIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVN-NIRP---DKQTVLFSA 493
Query: 302 TFPKEIQ 308
TFP+ ++
Sbjct: 494 TFPRHME 500
Score = 192 (72.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 44/89 (49%), Positives = 56/89 (62%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
Y KPT +Q AIP I+SGRDV+ A+TGSGKT AFL+P+ + ++ P G G
Sbjct: 324 YSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ---PELEEGDG--- 377
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFA 169
P+ ++LAPTRELA Q Y EA KFA
Sbjct: 378 -----PIAVILAPTRELAMQTYKEANKFA 401
Score = 42 (19.8 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 201 YDEAKKFAYRSQLRPC-VVYGGSNVGDQMRDLDRGCHLLVATPGRLV 246
YDE + A ++ R +V+G GD DL+ ++ T R+V
Sbjct: 715 YDEGEAEADANKKRMTRLVHGMEAGGDDDDDLEEQLSSMIKTKRRVV 761
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 207 (77.9 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 53/122 (43%), Positives = 70/122 (57%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YRS-QLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRL 245
L+LAPTRELA QI Y + Q C+ GG+NVG+ +R LD G H++ TPGR+
Sbjct: 105 LILAPTRELAGQIQKVLLALGDYMNVQCHACI--GGTNVGEDIRKLDYGQHVVAGTPGRV 162
Query: 246 VDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPK 305
DM+ R + + LVLDEAD ML+ GF+ QI + + P T Q + SAT P
Sbjct: 163 FDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLP-PAT---QVCLISATLPH 218
Query: 306 EI 307
EI
Sbjct: 219 EI 220
Score = 131 (51.2 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 39/101 (38%), Positives = 54/101 (53%)
Query: 61 PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL 120
P FD + + E + I ++KP+ +Q+ AI II GRDV+A +Q+G+GKTA F V +L
Sbjct: 33 PTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVL 92
Query: 121 NQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
Q + T L+LAPTRELA QI
Sbjct: 93 -QCLDIQVRETQ---------------ALILAPTRELAGQI 117
>UNIPROTKB|A4FV23 [details] [associations]
symbol:DDX21 "DDX21 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:DAAA02061828
EMBL:BC123648 IPI:IPI00694353 RefSeq:NP_001076996.1
UniGene:Bt.92068 Ensembl:ENSBTAT00000019351 GeneID:781917
KEGG:bta:781917 InParanoid:A4FV23 NextBio:20925123 Uniprot:A4FV23
Length = 784
Score = 220 (82.5 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 53/122 (43%), Positives = 73/122 (59%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFA-YRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
P LVLAPTRELA+Q+ ++ F+ +L YGG+ G Q+ + G +LV TPG
Sbjct: 262 PQVLVLAPTRELASQV---SRDFSDITKKLAVACFYGGTPYGGQIERMKNGIDILVGTPG 318
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDR-QTLMFSAT 302
R+ D L+ GK+ L + +VLDE D+MLDMGF Q+ I+ + D QTL+FSAT
Sbjct: 319 RIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSAT 378
Query: 303 FP 304
P
Sbjct: 379 CP 380
Score = 119 (46.9 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 86 PVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVF 145
P+Q + SG+D++A A+TG+GKT +F +P++ ++ G L GR
Sbjct: 212 PIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLVEKLL--GELQDRKRGRA-------- 261
Query: 146 PLGLVLAPTRELATQI 161
P LVLAPTRELA+Q+
Sbjct: 262 PQVLVLAPTRELASQV 277
>MGI|MGI:1860494 [details] [associations]
symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 21"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=ISS] [GO:0009615 "response to virus" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IMP] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1860494 GO:GO:0005524 GO:GO:0005730 EMBL:CH466553
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0043330 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:AF220365
EMBL:AF159131 EMBL:AK160095 EMBL:BC043655 IPI:IPI00120691
RefSeq:NP_062426.2 UniGene:Mm.413275 ProteinModelPortal:Q9JIK5
SMR:Q9JIK5 DIP:DIP-48574N IntAct:Q9JIK5 STRING:Q9JIK5
PhosphoSite:Q9JIK5 PaxDb:Q9JIK5 PRIDE:Q9JIK5
Ensembl:ENSMUST00000045866 GeneID:56200 KEGG:mmu:56200
InParanoid:Q3TVJ3 NextBio:312026 Bgee:Q9JIK5 CleanEx:MM_DDX21
Genevestigator:Q9JIK5 GermOnline:ENSMUSG00000020075 Uniprot:Q9JIK5
Length = 851
Score = 220 (82.5 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 54/122 (44%), Positives = 72/122 (59%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFA-YRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
P LVLAPTRELA Q+ +K F+ +L YGG+ G Q+ + G +LV TPG
Sbjct: 333 PQVLVLAPTRELANQV---SKDFSDITKKLSVACFYGGTPYGGQIERMRSGIDILVGTPG 389
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDR-QTLMFSAT 302
R+ D L+ GK+ L + +VLDE D+MLDMGF Q+ I+ + D QTL+FSAT
Sbjct: 390 RIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSAT 449
Query: 303 FP 304
P
Sbjct: 450 CP 451
Score = 120 (47.3 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 86 PVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVF 145
P+Q + SG+D++A A+TG+GKT +F +P++ ++ +G L GR
Sbjct: 283 PIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKL--QGGLQERKRGRA-------- 332
Query: 146 PLGLVLAPTRELATQI 161
P LVLAPTRELA Q+
Sbjct: 333 PQVLVLAPTRELANQV 348
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 203 (76.5 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 51/122 (41%), Positives = 72/122 (59%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YRS-QLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRL 245
L+L+PTRELA QI Y + Q C+ GG+N+G+ +R LD G H++ TPGR+
Sbjct: 98 LILSPTRELAVQIQKVVLALGDYMNVQCHACI--GGTNLGEDIRKLDYGQHVVSGTPGRV 155
Query: 246 VDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPK 305
DM+ R + + LVLDEAD ML+ GF+ Q+ I + +P G Q ++ SAT P
Sbjct: 156 FDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRY--LP-PG-AQVVLLSATLPH 211
Query: 306 EI 307
EI
Sbjct: 212 EI 213
Score = 135 (52.6 bits), Expect = 5.8e-25, Sum P(2) = 5.8e-25
Identities = 38/101 (37%), Positives = 55/101 (54%)
Query: 61 PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL 120
P FD + + E + I ++KP+ +Q+ AIP I+ RDV+A AQ+G+GKTA F + +L
Sbjct: 26 PTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVL 85
Query: 121 NQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
L T R+ L+L+PTRELA QI
Sbjct: 86 QS------LDTQV-------RETQ---ALILSPTRELAVQI 110
>TAIR|locus:2159527 [details] [associations]
symbol:STRS2 "STRESS RESPONSE SUPPRESSOR 2" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009414 "response
to water deprivation" evidence=IMP] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0042991 "transcription factor import into
nucleus" evidence=RCA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009651 GO:GO:0009409 GO:GO:0009414 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268799 EMBL:AB006697 EMBL:AJ010473 EMBL:AY035114
EMBL:AY142638 IPI:IPI00534387 PIR:T51348 RefSeq:NP_196479.1
UniGene:At.47465 ProteinModelPortal:Q94C75 SMR:Q94C75 STRING:Q94C75
PRIDE:Q94C75 EnsemblPlants:AT5G08620.1 GeneID:830763
KEGG:ath:AT5G08620 GeneFarm:945 TAIR:At5g08620 InParanoid:Q94C75
OMA:RELACQA PhylomeDB:Q94C75 ProtClustDB:CLSN2687472
Genevestigator:Q94C75 GermOnline:AT5G08620 Uniprot:Q94C75
Length = 563
Score = 196 (74.1 bits), Expect = 6.4e-25, Sum P(2) = 6.4e-25
Identities = 52/126 (41%), Positives = 70/126 (55%)
Query: 188 LVLAPTRELATQIYDEAK-KFAYRSQLRPCVVYGGSNVGDQMRDLDRG-CHLLVATPGRL 245
LV+ PTRELA Q EA Y + VV GG+ + + R L + C +LVATPGRL
Sbjct: 160 LVVCPTRELACQAAAEANILLKYHPSIGVQVVIGGTKLPTEQRRLQKSPCQILVATPGRL 219
Query: 246 VDMLERGK---IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSAT 302
D ++ L + LVLDEAD +LDMGF +I I+ +P+ RQT +FSAT
Sbjct: 220 KDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFRREIERIIA--AVPK--QRQTFLFSAT 275
Query: 303 FPKEIQ 308
E++
Sbjct: 276 VSDEVR 281
Score = 151 (58.2 bits), Expect = 6.4e-25, Sum P(2) = 6.4e-25
Identities = 40/115 (34%), Positives = 65/115 (56%)
Query: 51 STDTFLLPLPPQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSG 110
++D++L +FD ++ + I A + T VQ+ +P+I+ G+D++A A+TG+G
Sbjct: 72 TSDSYLSKT--RFDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTG 129
Query: 111 KTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEA 165
KT AFL+P + + + PPA R +R + LV+ PTRELA Q EA
Sbjct: 130 KTVAFLLPSIEAV-----IKAPPASRD--NRHPPI-IVLVVCPTRELACQAAAEA 176
>FB|FBgn0004419 [details] [associations]
symbol:me31B "maternal expression at 31B" species:7227
"Drosophila melanogaster" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0043186 "P granule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005875 GO:GO:0007095 EMBL:AE014134 GO:GO:0003723
GO:GO:0000932 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033962 GO:GO:0004004 eggNOG:COG0513
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 EMBL:M59926 EMBL:AY051663
PIR:A39157 RefSeq:NP_523533.2 RefSeq:NP_723539.1 UniGene:Dm.2770
ProteinModelPortal:P23128 SMR:P23128 IntAct:P23128 MINT:MINT-769276
STRING:P23128 PaxDb:P23128 PRIDE:P23128 EnsemblMetazoa:FBtr0079975
GeneID:34364 KEGG:dme:Dmel_CG4916 CTD:34364 FlyBase:FBgn0004419
InParanoid:P23128 OrthoDB:EOG45QFVG PhylomeDB:P23128 ChiTaRS:me31B
GenomeRNAi:34364 NextBio:788139 Bgee:P23128 GermOnline:CG4916
Uniprot:P23128
Length = 459
Score = 202 (76.2 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 43/121 (35%), Positives = 75/121 (61%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LV+ PTRELA Q + A +R V GG+ + D + + + L++ATPGR++D
Sbjct: 130 LVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDILRIYQKVQLIIATPGRILD 189
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
++++ +++CR LVLDEAD++L + F+ + ++ + +P+ D Q L+FSATFP +
Sbjct: 190 LMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILK--LPK--DPQILLFSATFPLTV 245
Query: 308 Q 308
+
Sbjct: 246 K 246
Score = 139 (54.0 bits), Expect = 7.1e-25, Sum P(2) = 7.1e-25
Identities = 45/162 (27%), Positives = 80/162 (49%)
Query: 1 MSYESNQNGTGLEQQ--LAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLP 58
M+ + N T L + + L ++ G ++ +PP ++ + TDT
Sbjct: 2 MTEKLNSGHTNLTSKGIINDLQIAGNTSDDMGWKSKLKLPP--KDNRFKTTDVTDT---- 55
Query: 59 LPPQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVP 118
+F++ + + I +++P+P+Q+ AIP+ +SG+DV+A A+ G+GKT A+ +P
Sbjct: 56 RGNEFEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIP 115
Query: 119 ILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQ 160
+L Q+ PT K + LV+ PTRELA Q
Sbjct: 116 VLEQID-----PT-----------KDYIQALVMVPTRELALQ 141
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 203 (76.5 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 51/122 (41%), Positives = 72/122 (59%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YRS-QLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRL 245
L+L+PTRELA QI Y + Q C+ GG+N+G+ +R LD G H++ TPGR+
Sbjct: 98 LILSPTRELAVQIQKVVLALGDYMNVQCHACI--GGTNLGEDIRKLDYGQHVVSGTPGRV 155
Query: 246 VDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPK 305
DM+ R + + LVLDEAD ML+ GF+ Q+ I + +P G Q ++ SAT P
Sbjct: 156 FDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRY--LP-PG-AQVVLLSATLPH 211
Query: 306 EI 307
EI
Sbjct: 212 EI 213
Score = 134 (52.2 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 37/101 (36%), Positives = 55/101 (54%)
Query: 61 PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL 120
P FD + + E + I ++KP+ +Q+ A+P I+ RDV+A AQ+G+GKTA F + +L
Sbjct: 26 PTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVL 85
Query: 121 NQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
L T R+ L+L+PTRELA QI
Sbjct: 86 QS------LDTQV-------RETQ---ALILSPTRELAVQI 110
>UNIPROTKB|B4E132 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
Ensembl:ENST00000420730 Uniprot:B4E132
Length = 407
Score = 223 (83.6 bits), Expect = 8.1e-25, Sum P(2) = 8.1e-25
Identities = 44/58 (75%), Positives = 50/58 (86%)
Query: 251 RGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
RGKIGL C++LVLDEADRMLDMGFEPQIR IV+++ MP G R T+MFSATFPKEIQ
Sbjct: 78 RGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 135
Score = 97 (39.2 bits), Expect = 8.1e-25, Sum P(2) = 8.1e-25
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 1 MSYESNQNGTGLEQQLAGLDLSAKKESAPGSNPRV--YVPPHLRN-QPSGGRNSTDT 54
MS+ +N L+QQLA LDL+++K+S S Y+PPHLRN + S G + D+
Sbjct: 1 MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDS 57
>UNIPROTKB|E2QTL6 [details] [associations]
symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003725 "double-stranded
RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0043330 InterPro:IPR014014 PROSITE:PS51195
CTD:9188 RefSeq:XP_851746.2 ProteinModelPortal:E2QTL6
Ensembl:ENSCAFT00000021901 GeneID:476891 KEGG:cfa:476891
NextBio:20852481 Uniprot:E2QTL6
Length = 785
Score = 220 (82.5 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 53/122 (43%), Positives = 72/122 (59%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFA-YRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
P LVLAPTRELA Q+ ++ F+ +L YGG+ G Q+ + G +LV TPG
Sbjct: 263 PQVLVLAPTRELANQV---SRDFSDITRKLAVACFYGGTPYGGQIERMRNGIDILVGTPG 319
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDR-QTLMFSAT 302
R+ D L+ GK+ L + +VLDE D+MLDMGF Q+ I+ + D QTL+FSAT
Sbjct: 320 RIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSAT 379
Query: 303 FP 304
P
Sbjct: 380 CP 381
Score = 117 (46.2 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 86 PVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVF 145
P+Q + SG+D++A A+TG+GKT +F +P++ ++ +G L GR
Sbjct: 213 PIQAKTFYHVYSGKDLIAQARTGTGKTFSFAIPLIVKL--QGELQDRKRGRA-------- 262
Query: 146 PLGLVLAPTRELATQI 161
P LVLAPTRELA Q+
Sbjct: 263 PQVLVLAPTRELANQV 278
>UNIPROTKB|F6V8G4 [details] [associations]
symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 OMA:QCEPPRE EMBL:AAEX03002786
Ensembl:ENSCAFT00000021901 Uniprot:F6V8G4
Length = 786
Score = 220 (82.5 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 53/122 (43%), Positives = 72/122 (59%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFA-YRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
P LVLAPTRELA Q+ ++ F+ +L YGG+ G Q+ + G +LV TPG
Sbjct: 263 PQVLVLAPTRELANQV---SRDFSDITRKLAVACFYGGTPYGGQIERMRNGIDILVGTPG 319
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDR-QTLMFSAT 302
R+ D L+ GK+ L + +VLDE D+MLDMGF Q+ I+ + D QTL+FSAT
Sbjct: 320 RIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSAT 379
Query: 303 FP 304
P
Sbjct: 380 CP 381
Score = 117 (46.2 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 86 PVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVF 145
P+Q + SG+D++A A+TG+GKT +F +P++ ++ +G L GR
Sbjct: 213 PIQAKTFYHVYSGKDLIAQARTGTGKTFSFAIPLIVKL--QGELQDRKRGRA-------- 262
Query: 146 PLGLVLAPTRELATQI 161
P LVLAPTRELA Q+
Sbjct: 263 PQVLVLAPTRELANQV 278
>DICTYBASE|DDB_G0293036 [details] [associations]
symbol:ddx5 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0293036 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000155_GR GO:GO:0000184
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 PROSITE:PS51195
EMBL:AAFI02000199 RefSeq:XP_629283.1 ProteinModelPortal:Q54CD6
EnsemblProtists:DDB0266367 GeneID:8629006 KEGG:ddi:DDB_G0293036
OMA:RISIMLL ProtClustDB:CLSZ2846571 Uniprot:Q54CD6
Length = 697
Score = 219 (82.2 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 49/124 (39%), Positives = 74/124 (59%)
Query: 186 LGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGC-HLLVATPGR 244
L LVL PTREL Q++ ++ V+YGG + Q+ L++ +L++TPGR
Sbjct: 293 LVLVLVPTRELGLQVHSNTLIITQLFGIKTSVIYGGISKNLQIEQLEKEKPQILISTPGR 352
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L++M+E G + L++ LVLDEAD+ML G PQ++ Q G R D Q ++FSATFP
Sbjct: 353 LIEMIENGHVDLSSVTMLVLDEADKMLSKGLIPQLK---QIRGQIRP-DSQNILFSATFP 408
Query: 305 KEIQ 308
++
Sbjct: 409 DSLK 412
Score = 118 (46.6 bits), Expect = 9.1e-25, Sum P(2) = 9.1e-25
Identities = 32/99 (32%), Positives = 50/99 (50%)
Query: 69 TEIITNNIAL----ARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMY 124
+E + N + L ++ PT Q+YA P I++G D++ + GSGKT +L P++
Sbjct: 210 SECLPNTLKLFFKKTQFPTPTLFQQYAWPAILTGHDIIGTSLPGSGKTLGYLAPMIPHCL 269
Query: 125 ERGPLPTPPAGRGYPSRKKVFP-LGLVLAPTRELATQIY 162
R G + K+ L LVL PTREL Q++
Sbjct: 270 ARVDRGGKNKITGEKAPKQYTGILVLVLVPTRELGLQVH 308
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 212 (79.7 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 53/121 (43%), Positives = 75/121 (61%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVL PTRELA QI + + L V+ GG ++ Q L R H++VATPGRLVD
Sbjct: 116 LVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVD 175
Query: 248 MLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
LE K L +FL++DEADR+L+M FE ++ I++ +PR +R+T +FSAT K+
Sbjct: 176 HLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKV--IPR--ERRTYLFSATMTKK 231
Query: 307 I 307
+
Sbjct: 232 V 232
Score = 123 (48.4 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 83 KPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRK 142
KP+ +Q+ A+P + G+DV+ A+TGSGKT AF +P+L + + P A
Sbjct: 66 KPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDH-----PQA-------- 112
Query: 143 KVFPLGLVLAPTRELATQI 161
F LVL PTRELA QI
Sbjct: 113 --F-FCLVLTPTRELAFQI 128
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 290 (107.1 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 63/121 (52%), Positives = 83/121 (68%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVLAPTRELA QI E KK+++R CV YGG N Q+ DL+RG +++ TPGRL D
Sbjct: 361 LVLAPTRELALQIEMEVKKYSFRGMKAVCV-YGGGNRNMQISDLERGAEIIICTPGRLND 419
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
++ I ++ +LVLDEADRMLDMGFEPQIR ++ + P DRQT+M SAT+P +
Sbjct: 420 LIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDI-RP---DRQTIMTSATWPPGV 475
Query: 308 Q 308
+
Sbjct: 476 R 476
Score = 177 (67.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVP-ILNQMYERGPLPTPPAGRGYP 139
+ KP+P+Q A P+++ G D++ AQTG+GKT AFL+P +++ Y+ P RG
Sbjct: 303 FSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTP-------RGTR 355
Query: 140 SRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCV 178
V LVLAPTRELA QI E KK+++R CV
Sbjct: 356 GGANV----LVLAPTRELALQIEMEVKKYSFRGMKAVCV 390
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 279 (103.3 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 60/124 (48%), Positives = 81/124 (65%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ L LAPTRELA QIY E K++ +L+ V+YGG + Q ++L GC ++VATPGR
Sbjct: 379 PIALFLAPTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGR 438
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+DM++ L +LVLDEAD+M D GF PQ+ IV + P DRQTL+FSATF
Sbjct: 439 LIDMIKLKATKLNRVSYLVLDEADKMFDFGFGPQVLSIVN-HVRP---DRQTLLFSATFK 494
Query: 305 KEIQ 308
++
Sbjct: 495 PNVE 498
Score = 195 (73.7 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 50/128 (39%), Positives = 72/128 (56%)
Query: 52 TDTFLLPLPPQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGK 111
T T L+ F +I+ IA + PTP+QK AIP+ +SGRD++A A+TGSGK
Sbjct: 296 TGTDLINPVTSFGHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGK 355
Query: 112 TAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYR 171
TA F+ P ++ + ++ P G G P+ L LAPTRELA QIY E K++
Sbjct: 356 TATFIWPSISHIMDQ---PYLEKGDG--------PIALFLAPTRELAHQIYLETLKYSKY 404
Query: 172 SQLRPCVV 179
+L+ V+
Sbjct: 405 FKLKTTVL 412
Score = 39 (18.8 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 12/58 (20%), Positives = 25/58 (43%)
Query: 5 SNQNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLPLPPQ 62
+N N G++L+ K + +N P +++ +G + D F +PP+
Sbjct: 50 NNNNNNNKNNIGTGINLNIKNNNNINNNNNKSGFPVKKSRFNGEDDDDDYFFSNVPPK 107
>FB|FBgn0030855 [details] [associations]
symbol:CG5800 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007526 "larval somatic muscle development"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0006200 GO:GO:0003723 GO:GO:0007526 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
KO:K14776 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 OMA:ADKVIEP HSSP:P10081 EMBL:AY119628
RefSeq:NP_573230.1 UniGene:Dm.13464 SMR:Q9VX34 STRING:Q9VX34
EnsemblMetazoa:FBtr0074453 GeneID:32742 KEGG:dme:Dmel_CG5800
UCSC:CG5800-RA FlyBase:FBgn0030855 InParanoid:Q9VX34
OrthoDB:EOG4MCVFH GenomeRNAi:32742 NextBio:780142 Uniprot:Q9VX34
Length = 826
Score = 207 (77.9 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 47/122 (38%), Positives = 72/122 (59%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
++++PTRELA QI++ KK ++ GG N+ + +D+ C++L+ TPGRL+
Sbjct: 148 IIISPTRELAYQIFETLKKVGKHHDFSAGLIIGGKNLKFERTRMDQ-CNILICTPGRLLQ 206
Query: 248 MLERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
++ + + LVLDEADR LDMGF+ + I+ EN P RQTL+FSAT
Sbjct: 207 HMDENPLFNTSTMEMLVLDEADRCLDMGFQKTLNSII-ENFPPV---RQTLLFSATQTNT 262
Query: 307 IQ 308
+Q
Sbjct: 263 VQ 264
Score = 137 (53.3 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 34/106 (32%), Positives = 57/106 (53%)
Query: 62 QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILN 121
+F +++ +A +++ PT VQ+ +I + G+DV+ A TGSGKT AFL+P+L
Sbjct: 73 KFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLE 132
Query: 122 QMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
++ T G ++++PTRELA QI++ KK
Sbjct: 133 HLFMNKWSRTDGVG------------AIIISPTRELAYQIFETLKK 166
>UNIPROTKB|A4R715 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001234 GO:GO:0008026 eggNOG:COG0513 KO:K12614
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_003716556.1
GeneID:2676879 KEGG:mgr:MGG_03388 OrthoDB:EOG4QJVWF Uniprot:A4R715
Length = 535
Score = 199 (75.1 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 43/121 (35%), Positives = 68/121 (56%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L+L PTRELA Q K + V GG+ + D + L H++V TPGR++D
Sbjct: 119 LILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTTLRDDILRLQDPVHIVVGTPGRILD 178
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
+ + L+ C ++DEAD++L + F P I ++Q + P+ DRQ ++FSATFP +
Sbjct: 179 LAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQLLQFH--PK--DRQVMLFSATFPISV 234
Query: 308 Q 308
+
Sbjct: 235 K 235
Score = 141 (54.7 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 36/99 (36%), Positives = 57/99 (57%)
Query: 62 QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILN 121
+F++ + + I A ++KP+P+Q+ +IPV ++GRD++A A+ G+GKTAAF+VP L
Sbjct: 48 EFENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALE 107
Query: 122 QMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQ 160
+ P K+ L+L PTRELA Q
Sbjct: 108 TIN--------------PKVSKI--QCLILVPTRELAMQ 130
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 279 (103.3 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 63/135 (46%), Positives = 88/135 (65%)
Query: 175 RPCVVRK-KVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDR 233
RP + R K L+L PTRELA Q+++ + + L+ VV+GG ++ Q+ L R
Sbjct: 76 RPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQINHLRR 135
Query: 234 GCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGD 293
G +LVATPGRL+D++ +G + L+ F VLDEADRMLDMGF P IR I++ +P +
Sbjct: 136 GVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKL--LPES-- 191
Query: 294 RQTLMFSATFPKEIQ 308
RQ L+FSATF KEI+
Sbjct: 192 RQNLLFSATFSKEIK 206
Score = 190 (71.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 44/99 (44%), Positives = 61/99 (61%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
Y +PTPVQ+ AIPVI+ RDVM AQTG+GKTA F +P+L +++ + PP R S
Sbjct: 30 YVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLF----VSRPPLQR---S 82
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
K V L+L PTRELA Q+++ + + L+ VV
Sbjct: 83 AKPVIR-ALILTPTRELAVQVFECVRAYGKYLPLKATVV 120
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 279 (103.3 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 63/135 (46%), Positives = 88/135 (65%)
Query: 175 RPCVVRK-KVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDR 233
RP + R K L+L PTRELA Q+++ + + L+ VV+GG ++ Q+ L R
Sbjct: 76 RPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQINHLRR 135
Query: 234 GCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGD 293
G +LVATPGRL+D++ +G + L+ F VLDEADRMLDMGF P IR I++ +P +
Sbjct: 136 GVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKL--LPES-- 191
Query: 294 RQTLMFSATFPKEIQ 308
RQ L+FSATF KEI+
Sbjct: 192 RQNLLFSATFSKEIK 206
Score = 190 (71.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 44/99 (44%), Positives = 61/99 (61%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
Y +PTPVQ+ AIPVI+ RDVM AQTG+GKTA F +P+L +++ + PP R S
Sbjct: 30 YVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLF----VSRPPLQR---S 82
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
K V L+L PTRELA Q+++ + + L+ VV
Sbjct: 83 AKPVIR-ALILTPTRELAVQVFECVRAYGKYLPLKATVV 120
>UNIPROTKB|J3QR64 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000581384
Uniprot:J3QR64
Length = 214
Score = 164 (62.8 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 43/101 (42%), Positives = 56/101 (55%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YR-SQLRPCVVYGGSNVGDQMRDLDRGC-HLLVATPGR 244
LVLAPTRELA QI Y + C+ GG+NV +++ L H++V TPGR
Sbjct: 115 LVLAPTRELAQQIQKVVMALGDYMGASCHACI--GGTNVRAEVQKLQMEAPHIIVGTPGR 172
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQE 285
+ DML R + + VLDEAD ML GF+ QI I Q+
Sbjct: 173 VFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQK 213
Score = 135 (52.6 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 40/99 (40%), Positives = 54/99 (54%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
FDD+ ++E + I ++KP+ +Q+ AI I G DV+A AQ+G+GKTA F + IL Q
Sbjct: 45 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQ 104
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
+ E T LVLAPTRELA QI
Sbjct: 105 I-ELDLKATQ---------------ALVLAPTRELAQQI 127
>ZFIN|ZDB-GENE-030131-9685 [details] [associations]
symbol:ddx18 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IMP] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-9685
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0030099 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K13179 CTD:8886
HOVERGEN:HBG105702 EMBL:AY648748 IPI:IPI00492099
RefSeq:NP_001003411.1 UniGene:Dr.24235 ProteinModelPortal:Q6DRL1
STRING:Q6DRL1 PRIDE:Q6DRL1 GeneID:321127 KEGG:dre:321127
InParanoid:Q6DRL1 NextBio:20807243 ArrayExpress:Q6DRL1 Bgee:Q6DRL1
Uniprot:Q6DRL1
Length = 653
Score = 199 (75.1 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 46/122 (37%), Positives = 77/122 (63%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
+VL+PTRELA Q Y K+ ++ GGSN + + L G ++LVATPGRL+D
Sbjct: 237 IVLSPTRELAMQTYGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGVNILVATPGRLLD 296
Query: 248 MLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
L+ N + L++DEADR+L++GFE +++ I++ +P+ RQ+++FSAT ++
Sbjct: 297 HLQNTPGFMFKNLQCLIIDEADRILEVGFEEELKQIIKL--LPKK--RQSMLFSATQTRK 352
Query: 307 IQ 308
++
Sbjct: 353 VE 354
Score = 142 (55.0 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 48/156 (30%), Positives = 76/156 (48%)
Query: 24 KKESAPGSNPRVYVPPHLRNQPSGGR---NSTDTFLLP--LPPQFDD---IQMTEIITNN 75
+++ G+ V P + N+ G + D LP L F+D ++E+++ N
Sbjct: 112 EEQQEEGNLETVKCPENGNNEKEGSAEEDSDEDGPQLPSGLTGAFEDRSFASLSEVVSEN 171
Query: 76 ----IALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPT 131
+ +D T +Q I ++ GRDV+A A+TGSGKT AFL+P + +Y+ +P
Sbjct: 172 TLKGVKEMGFDTMTEIQHKTIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLKFMPR 231
Query: 132 PPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
G G +VL+PTRELA Q Y K+
Sbjct: 232 N--GTGV----------IVLSPTRELAMQTYGVLKE 255
>UNIPROTKB|O05855 [details] [associations]
symbol:rhlE "PROBABLE ATP-DEPENDENT RNA HELICASE RHLE"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
EMBL:BX842582 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOGENOM:HOG000268807 EMBL:CP003248 PIR:D70595 RefSeq:NP_217727.1
RefSeq:NP_337835.1 RefSeq:YP_006516683.1 SMR:O05855
EnsemblBacteria:EBMYCT00000003215 EnsemblBacteria:EBMYCT00000071518
GeneID:13318029 GeneID:888840 GeneID:923099 KEGG:mtc:MT3307
KEGG:mtu:Rv3211 KEGG:mtv:RVBD_3211 PATRIC:18129030
TubercuList:Rv3211 OMA:RWQLIDK ProtClustDB:CLSK792349
Uniprot:O05855
Length = 527
Score = 212 (79.7 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 55/137 (40%), Positives = 77/137 (56%)
Query: 185 PLGLVLAPTRELATQIYDE---AKKF-----------AYRSQLRPCVVYGGSNVGDQMRD 230
P LV+ PTREL Q+ D+ A K+ A R +L +YGG Q+
Sbjct: 85 PRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDAAAVRRRLSVVSIYGGRPYEPQIEA 144
Query: 231 LDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPR 290
L G ++V TPGRL+D+ ++G + L LVLDEAD MLD+GF P I I+++ +P
Sbjct: 145 LRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDEADEMLDLGFLPDIERILRQ--IP- 201
Query: 291 TGDRQTLMFSATFPKEI 307
DRQ+++FSAT P I
Sbjct: 202 -ADRQSMLFSATMPDPI 217
Score = 119 (46.9 bits), Expect = 4.6e-24, Sum P(2) = 4.6e-24
Identities = 31/82 (37%), Positives = 43/82 (52%)
Query: 83 KPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRK 142
+P +Q+ +P+ + G DV+ A+TG GKT AF VP+L Q G P G
Sbjct: 32 RPFAIQELTLPLALDGEDVIGQARTGMGKTFAFGVPLL-QRITSGDGTRPLTGA------ 84
Query: 143 KVFPLGLVLAPTRELATQIYDE 164
P LV+ PTREL Q+ D+
Sbjct: 85 ---PRALVVVPTRELCLQVTDD 103
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 287 (106.1 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 62/124 (50%), Positives = 81/124 (65%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+GL+L PTRELA QI+ + K F LR YGG + DQ+ DL RG ++VAT GR
Sbjct: 452 PIGLILTPTRELAVQIFRDCKPFLKTLGLRAVCAYGGPPIKDQIADLKRGAEIVVATTGR 511
Query: 245 LVDML--ERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
++D+L +G++ L ++VLDEADRM DMGFEPQ+ I N P DRQT++FSA
Sbjct: 512 MIDLLAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQVMKIFA-NVRP---DRQTVLFSA 567
Query: 302 TFPK 305
T PK
Sbjct: 568 TMPK 571
Score = 206 (77.6 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 51/120 (42%), Positives = 70/120 (58%)
Query: 57 LPLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P Q + +T I + IA YDKPT +Q A+PVI+SGRDV+ A+TGSGKT AF
Sbjct: 373 VPKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTGSGKTMAF 432
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
L+P+ + ++ P+ G P+GL+L PTRELA QI+ + K F LR
Sbjct: 433 LLPMFRHIKDQEPVKD---NEG--------PIGLILTPTRELAVQIFRDCKPFLKTLGLR 481
>UNIPROTKB|J3KTB5 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584860
Uniprot:J3KTB5
Length = 257
Score = 180 (68.4 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 48/123 (39%), Positives = 66/123 (53%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YR-SQLRPCVVYGGSNVGDQMRDLDRGC-HLLVATPGR 244
LVLAPTRELA QI Y + C+ GG+NV +++ L H++V TPGR
Sbjct: 88 LVLAPTRELAQQIQKVVMALGDYMGASCHACI--GGTNVRAEVQKLQMEAPHIIVGTPGR 145
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
+ DML R + + VLDEAD ML GF+ QI I Q+ + Q ++ SAT P
Sbjct: 146 VFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQK----LNSNTQVVLLSATMP 201
Query: 305 KEI 307
++
Sbjct: 202 SDV 204
Score = 135 (52.6 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 40/99 (40%), Positives = 54/99 (54%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
FDD+ ++E + I ++KP+ +Q+ AI I G DV+A AQ+G+GKTA F + IL Q
Sbjct: 18 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQ 77
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
+ E T LVLAPTRELA QI
Sbjct: 78 I-ELDLKATQ---------------ALVLAPTRELAQQI 100
>UNIPROTKB|G5EHR3 [details] [associations]
symbol:MGCH7_ch7g509 "ATP-dependent RNA helicase DED1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CM000230
EMBL:CM001237 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 RefSeq:XP_003720990.1 ProteinModelPortal:G5EHR3
EnsemblFungi:MGG_02762T0 GeneID:2682767 KEGG:mgr:MGG_02762
Uniprot:G5EHR3
Length = 619
Score = 282 (104.3 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 57/125 (45%), Positives = 85/125 (68%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
PL +++ PTRELA Q ++EA+K YRS LRP VVYGG N DQ+R + GC +L ATPGR
Sbjct: 213 PLVVIVCPTRELAIQAFNEARKLCYRSMLRPGVVYGGGNFMDQIRQIGLGCDILCATPGR 272
Query: 245 LVDMLERGKI-GLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATF 303
L+ +++ ++ L R++V+DEAD ML +E ++ I+ G + + + L+FSATF
Sbjct: 273 LLHFMDKPELLNLQRVRYVVIDEADEMLTADWEEDMKKIMSAGGAAQ--EIKYLLFSATF 330
Query: 304 PKEIQ 308
PK+I+
Sbjct: 331 PKKIR 335
Score = 248 (92.4 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 53/124 (42%), Positives = 73/124 (58%)
Query: 62 QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILN 121
+F+D + + N+ L Y PTP+Q Y IP I G DV+ AQTGSGKTAAFL+P++N
Sbjct: 123 RFEDAGLHPAMLKNVDLCGYKVPTPIQAYCIPAIHKGHDVIGIAQTGSGKTAAFLIPVIN 182
Query: 122 QMYERG-----PLPTPPA-GRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
++ + P P P + PL +++ PTRELA Q ++EA+K YRS LR
Sbjct: 183 KLMGKAKKLAAPRPNPVEYNMDIHGPVRAEPLVVIVCPTRELAIQAFNEARKLCYRSMLR 242
Query: 176 PCVV 179
P VV
Sbjct: 243 PGVV 246
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 267 (99.0 bits), Expect = 9.6e-24, Sum P(2) = 9.6e-24
Identities = 73/197 (37%), Positives = 107/197 (54%)
Query: 119 ILNQMYERGPL-PTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPC 177
IL + ++G L PTP +G P+ + + +A T T ++ Q +
Sbjct: 191 ILRGLKKKGILHPTPIQIQGIPTILSGRDM-IGIAFTGSGKTLVFTLPVIMFCLEQEKRL 249
Query: 178 VVRKKVFPLGLVLAPTRELATQIYDEAKKFAY-----RSQLRPCVV-YGGSNVGDQMRDL 231
K+ P GL++ P+RELA Q + + + S L C + GG ++ +QM +
Sbjct: 250 PFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLHCALCIGGVSLKEQMETM 309
Query: 232 DRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRT 291
G H++VATPGRL+D+L++ + L CR+L LDEADRM+DMGFE IR I
Sbjct: 310 RHGVHIMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYF----K 365
Query: 292 GDRQTLMFSATFPKEIQ 308
G RQTL+FSAT PK+IQ
Sbjct: 366 GQRQTLLFSATMPKKIQ 382
Score = 146 (56.5 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP F ++++ I + PTP+Q IP I+SGRD++ A TGSGKT F +
Sbjct: 177 PPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTL 236
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIY 162
P++ E+ + P K+ P GL++ P+RELA Q +
Sbjct: 237 PVIMFCLEQE--------KRLPFSKREGPYGLIICPSRELARQTH 273
Score = 37 (18.1 bits), Expect = 9.6e-24, Sum P(2) = 9.6e-24
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 12 LEQQLAGLDLSAKKESAPGSNPR 34
L+Q+ G +++S GS PR
Sbjct: 48 LQQRRKGAAEEEQQDSGSGSEPR 70
>POMBASE|SPBC776.09 [details] [associations]
symbol:ste13 "ATP-dependent RNA helicase Ste13"
species:4896 "Schizosaccharomyces pombe" [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0030996 "cell cycle arrest in response to
nitrogen starvation" evidence=IMP] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IMP] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC776.09
GO:GO:0005524 GO:GO:0006417 EMBL:CU329671 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0031142 eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000290
OrthoDB:EOG4QJVWF EMBL:D29795 PIR:S46654 RefSeq:NP_596324.1
ProteinModelPortal:Q09181 SMR:Q09181 STRING:Q09181 PRIDE:Q09181
EnsemblFungi:SPBC776.09.1 GeneID:2541216 KEGG:spo:SPBC776.09
NextBio:20802328 GO:GO:0030996 Uniprot:Q09181
Length = 485
Score = 181 (68.8 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 41/117 (35%), Positives = 64/117 (54%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L+L PTRELA Q K ++ V GG+ + D + L+ H++V TPGR++D
Sbjct: 116 LILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRVLD 175
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
+ +G + C V+DEAD++L F P I ++ P+ +RQ ++SATFP
Sbjct: 176 LAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSY--FPK--NRQISLYSATFP 228
Score = 156 (60.0 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 44/140 (31%), Positives = 73/140 (52%)
Query: 21 LSAKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLPLPPQFDDIQMTEIITNNIALAR 80
L K E+A N R ++ QP R T+ +F+D + + I A
Sbjct: 5 LIQKLENA-NLNDRESFKGQMKAQPVDMRPKTEDVTKTRGTEFEDYYLKRELLMGIFEAG 63
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
+++P+P+Q+ +IP+ +SGRD++A A+ G+GKTAAF++P L ++ +
Sbjct: 64 FERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEKVDTK-------------- 109
Query: 141 RKKVFPLGLVLAPTRELATQ 160
+ K+ L +L PTRELA Q
Sbjct: 110 KSKIQTL--ILVPTRELALQ 127
>DICTYBASE|DDB_G0271708 [details] [associations]
symbol:ddx31 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0271708 GO:GO:0005524
GenomeReviews:CM000151_GR GO:GO:0003723 EMBL:AAFI02000006
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
InterPro:IPR025313 Pfam:PF13959 KO:K14806 HSSP:P10081
RefSeq:XP_645498.1 ProteinModelPortal:Q869P0
EnsemblProtists:DDB0234202 GeneID:8618126 KEGG:ddi:DDB_G0271708
OMA:THIQEAS Uniprot:Q869P0
Length = 908
Score = 194 (73.4 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 45/125 (36%), Positives = 75/125 (60%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQ-LRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLV 246
+++ PTREL++QIY+E +K + P ++ GG N + + +G ++LVATPGRL+
Sbjct: 284 VIITPTRELSSQIYEELQKLLKPFYWIVPGIIMGGENRSAEKARIRKGINILVATPGRLL 343
Query: 247 DMLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQE-NGMPRTGD--RQTLMFSAT 302
D L+ + N ++ +LDEAD++LD+GFE + I+ + RT RQ ++ SAT
Sbjct: 344 DHLQNTQSFPTDNIKWCILDEADKLLDLGFEKDVTTIINLLDSKKRTMKFKRQNILVSAT 403
Query: 303 FPKEI 307
+ I
Sbjct: 404 LSEGI 408
Score = 147 (56.8 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 35/103 (33%), Positives = 63/103 (61%)
Query: 66 IQMTEIITNN-IALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMY 124
+Q++E + N + +++KPT +Q+ +I I+ G D + AQTGSGKT ++L+P++ ++
Sbjct: 212 LQLSETLVRNLVGHMKHEKPTHIQEASITPILKGNDALVKAQTGSGKTLSYLIPVVQKLT 271
Query: 125 ERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
E+ T G Y +++ PTREL++QIY+E +K
Sbjct: 272 EQRV--TRSDGC-YC---------VIITPTRELSSQIYEELQK 302
>WB|WBGene00021277 [details] [associations]
symbol:Y23H5B.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003723 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14776 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268801 GeneTree:ENSGT00550000074980 OMA:ADKVIEP
HSSP:P10081 EMBL:FO080963 RefSeq:NP_490989.1
ProteinModelPortal:Q9N478 SMR:Q9N478 STRING:Q9N478 PaxDb:Q9N478
EnsemblMetazoa:Y23H5B.6 GeneID:171810 KEGG:cel:CELE_Y23H5B.6
UCSC:Y23H5B.6 CTD:171810 WormBase:Y23H5B.6 InParanoid:Q9N478
NextBio:872791 Uniprot:Q9N478
Length = 732
Score = 204 (76.9 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 51/127 (40%), Positives = 76/127 (59%)
Query: 184 FPLG-LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATP 242
+ LG L+++PTRELA Q + +V GGS+V + R+ G +++V TP
Sbjct: 147 YGLGALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDVAFE-RNRISGINIIVCTP 205
Query: 243 GRLVD-MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSA 301
GRL+ M E ++ + + LVLDEADRMLDMGF Q+ I+ N +P +RQTL+FSA
Sbjct: 206 GRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSII--NNLP--AERQTLLFSA 261
Query: 302 TFPKEIQ 308
T + ++
Sbjct: 262 TQTRNVK 268
Score = 131 (51.2 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 37/114 (32%), Positives = 60/114 (52%)
Query: 49 RNSTDTFLLPLPPQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTG 108
+ S+ TFL +F+D ++ + Y KPT +Q+ I ++G DV+ A+TG
Sbjct: 69 KKSSRTFL-----RFEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTG 123
Query: 109 SGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIY 162
SGKT A ++P+L ++ R +P G G L+++PTRELA Q +
Sbjct: 124 SGKTLALVIPVLEALW-RAKW-SPDYGLG----------ALIISPTRELALQTF 165
>UNIPROTKB|F1SUG7 [details] [associations]
symbol:DDX21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0043330
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00680000100003
OMA:EILCVAY EMBL:CT737244 EMBL:CU468175 Ensembl:ENSSSCT00000011217
Uniprot:F1SUG7
Length = 855
Score = 211 (79.3 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 52/122 (42%), Positives = 72/122 (59%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFA-YRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPG 243
P LVLAPTRELA+Q+ ++ F+ +L YGG+ G Q+ + G +LV TPG
Sbjct: 333 PQVLVLAPTRELASQV---SRDFSDITKKLAVACFYGGTPYGGQIDRMRNGIDILVGTPG 389
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDR-QTLMFSAT 302
R+ D L+ K+ L + +VLDE D+MLDMGF Q+ I+ + D QTL+FSAT
Sbjct: 390 RIKDHLQNNKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSEDNPQTLLFSAT 449
Query: 303 FP 304
P
Sbjct: 450 CP 451
Score = 122 (48.0 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 86 PVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVF 145
P+Q + SG+D++A A+TG+GKT +F +P++ ++ +G L GR
Sbjct: 283 PIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKL--QGELQDRKRGRA-------- 332
Query: 146 PLGLVLAPTRELATQI 161
P LVLAPTRELA+Q+
Sbjct: 333 PQVLVLAPTRELASQV 348
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 278 (102.9 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 77/207 (37%), Positives = 110/207 (53%)
Query: 109 SGKTAAFLVPILNQMYERGPL-PTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
S K F IL + ++G L PTP +G P+ + + +A T T ++
Sbjct: 182 SFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDM-IGIAFTGSGKTLVFTLPVI 240
Query: 168 FAYRSQLRPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ------LRPCVVYGG 221
Q + K+ P GL++ P+RELA Q + + + Q LR + GG
Sbjct: 241 MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG 300
Query: 222 SNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRC 281
+V +QM + G H++VATPGRL+D+L++ + L CR+L LDEADRM+DMGFE IR
Sbjct: 301 MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT 360
Query: 282 IVQENGMPRTGDRQTLMFSATFPKEIQ 308
I G RQTL+FSAT PK+IQ
Sbjct: 361 IFSYF----KGQRQTLLFSATMPKKIQ 383
Score = 144 (55.7 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP F +++ I + PTP+Q IP I+SGRD++ A TGSGKT F +
Sbjct: 178 PPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTL 237
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIY 162
P++ E+ + P K+ P GL++ P+RELA Q +
Sbjct: 238 PVIMFCLEQE--------KRLPFSKREGPYGLIICPSRELARQTH 274
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 278 (102.9 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 63/134 (47%), Positives = 87/134 (64%)
Query: 174 LRPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDR 233
L+P + ++ P LVL PTRELA Q+ E K++Y+ LR VYGG N +Q+ +L +
Sbjct: 306 LQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKG-LRSVCVYGGGNRDEQIEELKK 364
Query: 234 GCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGD 293
G +++ATPGRL D+ + L N +LVLDEAD+MLDMGFEPQI I+ + P D
Sbjct: 365 GVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDV-RP---D 420
Query: 294 RQTLMFSATFPKEI 307
RQT+M SAT+P +
Sbjct: 421 RQTVMTSATWPHSV 434
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 48/125 (38%), Positives = 67/125 (53%)
Query: 58 PLP-PQ--FDD-IQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTA 113
P+P P FDD Q + NI A + KPTP+Q A P+++ G D++ AQTG+GKT
Sbjct: 235 PIPNPTCTFDDAFQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTL 294
Query: 114 AFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ 173
+L+P L P+ +G +R P LVL PTRELA Q+ E K++Y+
Sbjct: 295 CYLMPGFIH------LVLQPSLKGQRNR----PGMLVLTPTRELALQVEGECCKYSYKGL 344
Query: 174 LRPCV 178
CV
Sbjct: 345 RSVCV 349
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 278 (102.9 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 57/124 (45%), Positives = 79/124 (63%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTREL QI+ E K+F LR VYGG ++ +Q + L G ++V TPGR
Sbjct: 322 PIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 381
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D +++ L +LV DEADRM DMGFE Q+R I + P DRQTL+FSATF
Sbjct: 382 LIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIAS-HVRP---DRQTLLFSATFR 437
Query: 305 KEIQ 308
K+I+
Sbjct: 438 KKIE 441
Score = 183 (69.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 46/123 (37%), Positives = 67/123 (54%)
Query: 58 PLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P F E + + I + Y +PTP+Q +PV +SGRD++ A+TGSGKTAAF+
Sbjct: 244 PRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFI 303
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
P+L + ++ L P G G P+ +++ PTREL QI+ E K+F LR
Sbjct: 304 WPMLIHIMDQKELE-P--GDG--------PIAVIVCPTRELCQQIHSECKRFGKAYNLRS 352
Query: 177 CVV 179
V
Sbjct: 353 VAV 355
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 275 (101.9 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 76/207 (36%), Positives = 109/207 (52%)
Query: 109 SGKTAAFLVPILNQMYERG-PLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
S K F IL + ++G PTP +G P+ + + +A T T ++
Sbjct: 178 SFKEMKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDM-IGIAFTGSGKTLVFTLPVI 236
Query: 168 FAYRSQLRPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ------LRPCVVYGG 221
Q + K+ P GL++ P+RELA Q + + + Q LR + GG
Sbjct: 237 MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGIIEYYCRLLQEDSLPPLRCALCIGG 296
Query: 222 SNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRC 281
+V +QM + G H++VATPGRL+D+L++ + L CR+L LDEADRM+DMGFE IR
Sbjct: 297 MSVKEQMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT 356
Query: 282 IVQENGMPRTGDRQTLMFSATFPKEIQ 308
I G RQTL+FSAT PK+IQ
Sbjct: 357 IFSYF----KGQRQTLLFSATMPKKIQ 379
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP F +++ I + +PTP+Q IP I+SGRD++ A TGSGKT F +
Sbjct: 174 PPIKSFKEMKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTL 233
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIY 162
P++ E+ + P K+ P GL++ P+RELA Q +
Sbjct: 234 PVIMFCLEQE--------KRLPFSKREGPYGLIICPSRELARQTH 270
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 274 (101.5 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 57/121 (47%), Positives = 79/121 (65%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVLAPTRELA QI + + R+++R C +YGG N+ Q+R L G ++VA PGRL+D
Sbjct: 74 LVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVDVVVACPGRLLD 133
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
+ RG I + L++DEADRM DMGF+P I+ I++ P QTL+FSAT P E+
Sbjct: 134 HIWRGTIDICGVETLIIDEADRMFDMGFQPDIQSILKCLVQPH----QTLLFSATMPPEV 189
Query: 308 Q 308
+
Sbjct: 190 R 190
Score = 188 (71.2 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 45/117 (38%), Positives = 65/117 (55%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F+ + + Y +PTP+Q AIP I+ G DV+ AQTG+GKTAA+ +P++ +
Sbjct: 3 FESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVIQK 62
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
M L TP RG R + LVLAPTRELA QI + + R+++R C +
Sbjct: 63 M-----LSTP---RG---RVRT----LVLAPTRELACQIAESFRSLGQRARIRECSI 104
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 278 (102.9 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 57/124 (45%), Positives = 79/124 (63%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTREL QI+ E K+F LR VYGG ++ +Q + L G ++V TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D +++ L +LV DEADRM DMGFE Q+R I + P DRQTL+FSATF
Sbjct: 387 LIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIAS-HVRP---DRQTLLFSATFR 442
Query: 305 KEIQ 308
K+I+
Sbjct: 443 KKIE 446
Score = 182 (69.1 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 46/123 (37%), Positives = 67/123 (54%)
Query: 58 PLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P F E + + I + Y +PTP+Q +PV +SGRD++ A+TGSGKTAAF+
Sbjct: 249 PRPGSSFARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFI 308
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
P+L + ++ L P G G P+ +++ PTREL QI+ E K+F LR
Sbjct: 309 WPMLIHIMDQKELE-P--GDG--------PIAVIVCPTRELCQQIHSECKRFGKAYNLRS 357
Query: 177 CVV 179
V
Sbjct: 358 VAV 360
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 274 (101.5 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 62/124 (50%), Positives = 83/124 (66%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
PL LV+APTRELA QI + K + +R YGG DQ R L G +++ TPGR
Sbjct: 185 PLVLVMAPTRELAQQIEEVCKTSIRGTSIRQLCAYGGLGKIDQSRILRNGVDIVIGTPGR 244
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L D+L K L++ ++LVLDEADRMLDMGF PQI ++ + +P+ +RQTLMFSAT+P
Sbjct: 245 LNDLLR--KHHLSSVQYLVLDEADRMLDMGFMPQIESLIDQ--IPK--ERQTLMFSATWP 298
Query: 305 KEIQ 308
KE++
Sbjct: 299 KEVK 302
Score = 142 (55.0 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 37/86 (43%), Positives = 51/86 (59%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
+ PT +Q + P+I+ G D++ A TGSGKT AFL+P L ++ LP P+ Y +
Sbjct: 130 FTAPTVIQGQSWPIILGGNDLVGLAATGSGKTLAFLLPALLKIIS---LPKRPS---YGA 183
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAK 166
PL LV+APTRELA QI + K
Sbjct: 184 T----PLVLVMAPTRELAQQIEEVCK 205
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 278 (102.9 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 57/124 (45%), Positives = 79/124 (63%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTREL QI+ E K+F LR VYGG ++ +Q + L G ++V TPGR
Sbjct: 329 PIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 388
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D +++ L +LV DEADRM DMGFE Q+R I + P DRQTL+FSATF
Sbjct: 389 LIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIAS-HVRP---DRQTLLFSATFR 444
Query: 305 KEIQ 308
K+I+
Sbjct: 445 KKIE 448
Score = 183 (69.5 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 46/123 (37%), Positives = 67/123 (54%)
Query: 58 PLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P F E + + I + Y +PTP+Q +PV +SGRD++ A+TGSGKTAAF+
Sbjct: 251 PRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFI 310
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
P+L + ++ L P G G P+ +++ PTREL QI+ E K+F LR
Sbjct: 311 WPMLIHIMDQKELE-P--GDG--------PIAVIVCPTRELCQQIHSECKRFGKAYNLRS 359
Query: 177 CVV 179
V
Sbjct: 360 VAV 362
>POMBASE|SPBC543.06c [details] [associations]
symbol:dbp8 "ATP-dependent RNA helicase Dbp8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC543.06c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW
RefSeq:NP_596794.1 ProteinModelPortal:Q9HGM5 STRING:Q9HGM5
EnsemblFungi:SPBC543.06c.1 GeneID:2541069 KEGG:spo:SPBC543.06c
NextBio:20802183 Uniprot:Q9HGM5
Length = 453
Score = 197 (74.4 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 49/126 (38%), Positives = 73/126 (57%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L+L PTRELA QI ++ L+ ++ GG ++ Q DL + H++VATPGRL D
Sbjct: 79 LILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIRQSIDLSKRPHVVVATPGRLAD 138
Query: 248 MLE-RGK---IGLANCRFLVLDEADRMLDMGFEPQIR-CIVQENGMPRTGDRQTLMFSAT 302
++ G+ GL +FLV+DEADR+L F + C + +P + DRQTL+F+AT
Sbjct: 139 LIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCF---SVLPASEDRQTLLFTAT 195
Query: 303 FPKEIQ 308
I+
Sbjct: 196 VTDAIR 201
Score = 128 (50.1 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 38/103 (36%), Positives = 60/103 (58%)
Query: 63 FDDIQMTEIITNNI-ALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILN 121
F D+ ++ + + + ALA Y+ PT +Q+ I I+ GR+ + A+TGSGKTAAF +PI+
Sbjct: 9 FSDLGISPWLIDTLKALAIYE-PTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALPIIE 67
Query: 122 QMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDE 164
+ + P+G +F L+L PTRELA QI ++
Sbjct: 68 KWSK------DPSG--------IF--ALILTPTRELAIQIDEQ 94
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 206 (77.6 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 45/120 (37%), Positives = 70/120 (58%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L+L+PTRELATQ + + ++ GG++VG+ +R L+ G H++ TPGR+ D
Sbjct: 107 LILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCD 166
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
M++R + + L+LDE+D ML GF+ QI + + +P D Q + SAT P EI
Sbjct: 167 MIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRY--LPP--DLQVCLVSATLPHEI 222
Score = 113 (44.8 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 32/98 (32%), Positives = 56/98 (57%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F+D+ + E + + ++KP+ +Q+ A+ I+ GRDV+A AQ+G+GKT+ + + Q
Sbjct: 37 FNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVC-Q 95
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQ 160
+ + S ++V L+L+PTRELATQ
Sbjct: 96 VVDT-------------SSREV--QALILSPTRELATQ 118
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 234 (87.4 bits), Expect = 5.0e-23, Sum P(3) = 5.0e-23
Identities = 48/107 (44%), Positives = 70/107 (65%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTRELA QI +E KF ++ V GG++ DQ L G +++ATPGR
Sbjct: 379 PYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIATPGR 438
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRT 291
L+D+LE + L C +++LDEADRMLDMGFEP ++ +++ MP T
Sbjct: 439 LLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEY--MPDT 483
Score = 174 (66.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 39/88 (44%), Positives = 55/88 (62%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
Y +PTP+Q+ AIP+ + RDV+ A+TGSGKTAAFL+P+L + P R
Sbjct: 321 YLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITS-----LPKMER--QE 373
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKF 168
+ + P +++APTRELA QI +E KF
Sbjct: 374 HRDLGPYAIIMAPTRELAQQIEEETNKF 401
Score = 45 (20.9 bits), Expect = 5.0e-23, Sum P(3) = 5.0e-23
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 160 QIYDEAKKFAYRSQLRPCVVRKKVFPLGL 188
++Y K+ Y L P ++++ P+GL
Sbjct: 311 EVYQAVKEIGY---LEPTPIQRQAIPIGL 336
Score = 41 (19.5 bits), Expect = 5.0e-23, Sum P(3) = 5.0e-23
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 294 RQTLMFSATFPKEIQ 308
RQT+MF+AT I+
Sbjct: 509 RQTVMFTATMSSAIE 523
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 277 (102.6 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 58/124 (46%), Positives = 79/124 (63%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTREL QI+ E K+F LR VYGG ++ +Q + L G ++V TPGR
Sbjct: 331 PIAVIVCPTRELCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 390
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D +++ L FLV DEADRM DMGFE Q+R I + P DRQTL+FSATF
Sbjct: 391 LIDHVKKKATSLQRVTFLVFDEADRMFDMGFEYQVRSIAS-HVRP---DRQTLLFSATFR 446
Query: 305 KEIQ 308
K+I+
Sbjct: 447 KKIE 450
Score = 183 (69.5 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 46/123 (37%), Positives = 66/123 (53%)
Query: 58 PLPP-QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P F E + + I + Y +PTP+Q +P+ +SGRD + A+TGSGKTAAF+
Sbjct: 253 PKPATSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFI 312
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
PIL + ++ L P G G P+ +++ PTREL QI+ E K+F LR
Sbjct: 313 WPILVHIMDQKELE-P--GEG--------PIAVIVCPTRELCQQIHAECKRFGKAYGLRS 361
Query: 177 CVV 179
V
Sbjct: 362 VAV 364
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 199 (75.1 bits), Expect = 5.3e-23, Sum P(2) = 5.3e-23
Identities = 49/120 (40%), Positives = 69/120 (57%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L L+PTRELA QI ++ V GG+N+G+ +R LD G H++ TPGR+ D
Sbjct: 98 LCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFD 157
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
M++R + + LVLDEAD ML+ GF+ QI + + P T Q ++ SAT P EI
Sbjct: 158 MIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLP-PAT---QVVLISATLPHEI 213
Score = 122 (48.0 bits), Expect = 5.3e-23, Sum P(2) = 5.3e-23
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 61 PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL 120
P F+ + + E + I ++KP+ +Q+ +I I+ GRDV+A AQ+G+GKTA F + IL
Sbjct: 26 PTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFSISIL 85
Query: 121 NQM 123
+
Sbjct: 86 QSL 88
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 200 (75.5 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 45/120 (37%), Positives = 72/120 (60%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L+L+PTRELA QI + ++ GG++VG+ ++ LD G H++ TPGR+ D
Sbjct: 93 LILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTD 152
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
M+ R + N + L+LDEAD +L+ GF+ QI I + +P G Q ++ SAT P+++
Sbjct: 153 MIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRY--LP-PGT-QVVVVSATLPQDV 208
Score = 120 (47.3 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
Identities = 37/99 (37%), Positives = 51/99 (51%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F+++ + E + I Y+ P+ VQ AI I GRDV+A AQ+G+GKTA F + IL Q
Sbjct: 23 FEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKTATFSIGIL-Q 81
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
+ T L+L+PTRELA QI
Sbjct: 82 SIDLSVRDTQ---------------ALILSPTRELAVQI 105
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 273 (101.2 bits), Expect = 6.5e-23, P = 6.5e-23
Identities = 74/197 (37%), Positives = 107/197 (54%)
Query: 119 ILNQMYERGPL-PTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPC 177
IL + ++G L PTP +G P+ + + +A T T ++ Q +
Sbjct: 192 ILRGLKKKGILHPTPIQIQGIPTILSGRDM-IGIAFTGSGKTLVFTLPVIMFCLEQEKRL 250
Query: 178 VVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ------LRPCVVYGGSNVGDQMRDL 231
K+ P GL++ P+RELA Q + + + Q LR + GG +V +QM +
Sbjct: 251 PFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETI 310
Query: 232 DRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRT 291
G H++VATPGRL+D+L++ + L CR+L LDEADRM+DMGFE IR I
Sbjct: 311 RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYF----K 366
Query: 292 GDRQTLMFSATFPKEIQ 308
G RQTL+FSAT PK+IQ
Sbjct: 367 GQRQTLLFSATMPKKIQ 383
Score = 146 (56.5 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP F ++++ I + PTP+Q IP I+SGRD++ A TGSGKT F +
Sbjct: 178 PPIKSFKEMKLPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTL 237
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIY 162
P++ E+ + P K+ P GL++ P+RELA Q +
Sbjct: 238 PVIMFCLEQE--------KRLPFSKREGPYGLIICPSRELARQTH 274
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 271 (100.5 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 57/121 (47%), Positives = 82/121 (67%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LV++PTRELA+QIYD + ++ C VYGG +Q L + ++VATPGRL+D
Sbjct: 186 LVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLD 244
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
+L+ G + L+ +LVLDEADRML+ GFE I+ I++E + RQTLMF+AT+PKE+
Sbjct: 245 LLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASK---RQTLMFTATWPKEV 301
Query: 308 Q 308
+
Sbjct: 302 R 302
Score = 166 (63.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 48/149 (32%), Positives = 76/149 (51%)
Query: 31 SNPRVYVPPHLRNQPSGGRNSTDTFLLPLPPQFDDIQMTEIITNNIALARYDKPTPVQKY 90
S P+ + + + +S D L PL FD + + I I+ ++ KPTP+Q
Sbjct: 85 SLPQSDIDEYFKENEIAVEDSLDLALRPLL-SFDYLSLDSSIQAEIS--KFPKPTPIQAV 141
Query: 91 AIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLV 150
A P ++SG+DV+ A+TGSGKT AF VP ++ + +K+ + LV
Sbjct: 142 AWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMN-------------DQKKRGIQV-LV 187
Query: 151 LAPTRELATQIYDEAKKFAYRSQLRPCVV 179
++PTRELA+QIYD + ++ C V
Sbjct: 188 ISPTRELASQIYDNLIVLTDKVGMQCCCV 216
>TAIR|locus:2008296 [details] [associations]
symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
Uniprot:Q9C8J1
Length = 392
Score = 205 (77.2 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 44/120 (36%), Positives = 70/120 (58%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LVL+P+RELA+Q + + ++ GG ++G+ ++ L+RG H + TPGR+ D
Sbjct: 94 LVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVHAVSGTPGRVYD 153
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
M++RG + + LVLDE+D ML G + QI + + +P D Q + SAT P+EI
Sbjct: 154 MIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYR--ALPH--DIQVCLISATLPQEI 209
Score = 112 (44.5 bits), Expect = 6.8e-23, Sum P(2) = 6.8e-23
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
FDD+ M + + + Y KP+ +Q+ A+ I+ GRDV+A AQ+G+GKT+ + +
Sbjct: 24 FDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQI 83
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQ 160
+ SRK LVL+P+RELA+Q
Sbjct: 84 V-------------NISSRKVQV---LVLSPSRELASQ 105
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 276 (102.2 bits), Expect = 6.9e-23, P = 6.9e-23
Identities = 57/124 (45%), Positives = 79/124 (63%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTREL QI+ E K+F LR VYGG ++ +Q + L G ++V TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D +++ L +LV DEADRM DMGFE Q+R I + P DRQTL+FSATF
Sbjct: 387 LIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIAS-HVRP---DRQTLLFSATFR 442
Query: 305 KEIQ 308
K+I+
Sbjct: 443 KKIE 446
Score = 182 (69.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 46/123 (37%), Positives = 67/123 (54%)
Query: 58 PLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P F E + + I + Y +PTP+Q +PV +SGRD++ A+TGSGKTAAF+
Sbjct: 249 PRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFI 308
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
P+L + ++ L P G G P+ +++ PTREL QI+ E K+F LR
Sbjct: 309 WPMLIHIMDQKELE-P--GDG--------PIAVIVCPTRELCQQIHAECKRFGKAYNLRS 357
Query: 177 CVV 179
V
Sbjct: 358 VAV 360
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 276 (102.2 bits), Expect = 6.9e-23, P = 6.9e-23
Identities = 57/124 (45%), Positives = 79/124 (63%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTREL QI+ E K+F LR VYGG ++ +Q + L G ++V TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D +++ L +LV DEADRM DMGFE Q+R I + P DRQTL+FSATF
Sbjct: 387 LIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIAS-HVRP---DRQTLLFSATFR 442
Query: 305 KEIQ 308
K+I+
Sbjct: 443 KKIE 446
Score = 182 (69.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 46/123 (37%), Positives = 67/123 (54%)
Query: 58 PLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P F E + + I + Y +PTP+Q +PV +SGRD++ A+TGSGKTAAF+
Sbjct: 249 PRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFI 308
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
P+L + ++ L P G G P+ +++ PTREL QI+ E K+F LR
Sbjct: 309 WPMLIHIMDQKELE-P--GDG--------PIAVIVCPTRELCQQIHAECKRFGKAYNLRS 357
Query: 177 CVV 179
V
Sbjct: 358 VAV 360
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 276 (102.2 bits), Expect = 7.0e-23, P = 7.0e-23
Identities = 57/124 (45%), Positives = 79/124 (63%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTREL QI+ E K+F LR VYGG ++ +Q + L G ++V TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D +++ L +LV DEADRM DMGFE Q+R I + P DRQTL+FSATF
Sbjct: 387 LIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIAS-HVRP---DRQTLLFSATFR 442
Query: 305 KEIQ 308
K+I+
Sbjct: 443 KKIE 446
Score = 182 (69.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 46/123 (37%), Positives = 67/123 (54%)
Query: 58 PLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P F E + + I + Y +PTP+Q +PV +SGRD++ A+TGSGKTAAF+
Sbjct: 249 PRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFI 308
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
P+L + ++ L P G G P+ +++ PTREL QI+ E K+F LR
Sbjct: 309 WPMLIHIMDQKELE-P--GDG--------PIAVIVCPTRELCQQIHAECKRFGKAYNLRS 357
Query: 177 CVV 179
V
Sbjct: 358 VAV 360
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 276 (102.2 bits), Expect = 7.1e-23, P = 7.1e-23
Identities = 57/124 (45%), Positives = 79/124 (63%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTREL QI+ E K+F LR VYGG ++ +Q + L G ++V TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D +++ L +LV DEADRM DMGFE Q+R I + P DRQTL+FSATF
Sbjct: 387 LIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIAS-HVRP---DRQTLLFSATFR 442
Query: 305 KEIQ 308
K+I+
Sbjct: 443 KKIE 446
Score = 182 (69.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 46/123 (37%), Positives = 67/123 (54%)
Query: 58 PLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P F E + + I + Y +PTP+Q +PV +SGRD++ A+TGSGKTAAF+
Sbjct: 249 PRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFI 308
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
P+L + ++ L P G G P+ +++ PTREL QI+ E K+F LR
Sbjct: 309 WPMLIHIMDQKELE-P--GDG--------PIAVIVCPTRELCQQIHAECKRFGKAYNLRS 357
Query: 177 CVV 179
V
Sbjct: 358 VAV 360
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 276 (102.2 bits), Expect = 7.1e-23, P = 7.1e-23
Identities = 57/124 (45%), Positives = 79/124 (63%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTREL QI+ E K+F LR VYGG ++ +Q + L G ++V TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D +++ L +LV DEADRM DMGFE Q+R I + P DRQTL+FSATF
Sbjct: 387 LIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIAS-HVRP---DRQTLLFSATFR 442
Query: 305 KEIQ 308
K+I+
Sbjct: 443 KKIE 446
Score = 182 (69.1 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 46/123 (37%), Positives = 67/123 (54%)
Query: 58 PLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P F E + + I + Y +PTP+Q +PV +SGRD++ A+TGSGKTAAF+
Sbjct: 249 PRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFI 308
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
P+L + ++ L P G G P+ +++ PTREL QI+ E K+F LR
Sbjct: 309 WPMLIHIMDQKELE-P--GDG--------PIAVIVCPTRELCQQIHAECKRFGKAYNLRS 357
Query: 177 CVV 179
V
Sbjct: 358 VAV 360
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 276 (102.2 bits), Expect = 7.1e-23, P = 7.1e-23
Identities = 57/124 (45%), Positives = 79/124 (63%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTREL QI+ E K+F LR VYGG ++ +Q + L G ++V TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D +++ L +LV DEADRM DMGFE Q+R I + P DRQTL+FSATF
Sbjct: 387 LIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIAS-HVRP---DRQTLLFSATFR 442
Query: 305 KEIQ 308
K+I+
Sbjct: 443 KKIE 446
Score = 182 (69.1 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 46/123 (37%), Positives = 67/123 (54%)
Query: 58 PLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P F E + + I + Y +PTP+Q +PV +SGRD++ A+TGSGKTAAF+
Sbjct: 249 PRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFI 308
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
P+L + ++ L P G G P+ +++ PTREL QI+ E K+F LR
Sbjct: 309 WPMLIHIMDQKELE-P--GDG--------PIAVIVCPTRELCQQIHAEGKRFGKAYNLRS 357
Query: 177 CVV 179
V
Sbjct: 358 VAV 360
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 276 (102.2 bits), Expect = 7.2e-23, P = 7.2e-23
Identities = 57/124 (45%), Positives = 79/124 (63%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P+ +++ PTREL QI+ E K+F LR VYGG ++ +Q + L G ++V TPGR
Sbjct: 327 PIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 386
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D +++ L +LV DEADRM DMGFE Q+R I + P DRQTL+FSATF
Sbjct: 387 LIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIAS-HVRP---DRQTLLFSATFR 442
Query: 305 KEIQ 308
K+I+
Sbjct: 443 KKIE 446
Score = 182 (69.1 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 46/123 (37%), Positives = 67/123 (54%)
Query: 58 PLP-PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P F E + + I + Y +PTP+Q +PV +SGRD++ A+TGSGKTAAF+
Sbjct: 249 PRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFI 308
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
P+L + ++ L P G G P+ +++ PTREL QI+ E K+F LR
Sbjct: 309 WPMLIHIMDQKELE-P--GDG--------PIAVIVCPTRELCQQIHAECKRFGKAYNLRS 357
Query: 177 CVV 179
V
Sbjct: 358 VAV 360
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 272 (100.8 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 74/225 (32%), Positives = 119/225 (52%)
Query: 94 VIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPL-PTPPAGRGYP---SRKKVFPLGL 149
+I++G D+ + + K F P+L+ + E+G + PTP +G P + + + +G+
Sbjct: 134 IIVNGDDIPPPIK--NFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDM--IGI 189
Query: 150 VLAPTRELATQIYDEAKKFAYRSQLRPCVVRKKVFPLGLVLAPTRELATQIYDEAKKF-- 207
+ + + + P + P+GL++ P+RELA Q Y+ ++F
Sbjct: 190 AFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEG--PIGLIVCPSRELARQTYEVVEQFVA 247
Query: 208 ----AYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLV 263
A LR + GG ++ Q+ + RG H++VATPGRL DML + K+ L CR+L
Sbjct: 248 PLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLT 307
Query: 264 LDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
LDEADR++D+GFE IR + RQTL+FSAT P +IQ
Sbjct: 308 LDEADRLVDLGFEDDIREVFDHF----KSQRQTLLFSATMPTKIQ 348
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/112 (35%), Positives = 64/112 (57%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP F D++ + + + +PTP+Q +PVI++GRD++ A TGSGKT F++
Sbjct: 143 PPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVL 202
Query: 118 P-ILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKF 168
P I+ + E +P AG G P+GL++ P+RELA Q Y+ ++F
Sbjct: 203 PMIMIALQEEMMMPIA-AGEG--------PIGLIVCPSRELARQTYEVVEQF 245
>UNIPROTKB|E7EX41 [details] [associations]
symbol:DDX55 "ATP-dependent RNA helicase DDX55"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC055713 EMBL:AC117503 HGNC:HGNC:20085 ChiTaRS:DDX55
IPI:IPI01018972 ProteinModelPortal:E7EX41 SMR:E7EX41
Ensembl:ENST00000354291 ArrayExpress:E7EX41 Bgee:E7EX41
Uniprot:E7EX41
Length = 191
Score = 167 (63.8 bits), Expect = 7.4e-23, Sum P(2) = 7.4e-23
Identities = 45/101 (44%), Positives = 61/101 (60%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YRSQLRPCVVYGGSNVGDQM-RDLDRGCHLLVATPGRL 245
+++ PTRELA QI + F + + + GG N G+ + R +G +++VATPGRL
Sbjct: 86 IIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGNIIVATPGRL 145
Query: 246 VDMLERGKIGL--ANC-R---FLVLDEADRMLDMGFEPQIR 280
DM R GL A+C R LVLDEADR+LDMGFE + R
Sbjct: 146 EDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEARRR 186
Score = 119 (46.9 bits), Expect = 7.4e-23, Sum P(2) = 7.4e-23
Identities = 34/81 (41%), Positives = 45/81 (55%)
Query: 85 TPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKV 144
TPVQ IP+ + +DV A A TGSGKT AF++PIL + R + K
Sbjct: 33 TPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRR------------EEKLKK 80
Query: 145 FPLG-LVLAPTRELATQIYDE 164
+G +++ PTRELA QI DE
Sbjct: 81 SQVGAIIITPTRELAIQI-DE 100
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 272 (100.8 bits), Expect = 8.3e-23, P = 8.3e-23
Identities = 58/130 (44%), Positives = 83/130 (63%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQ------LRPCVVYGGSNVGDQMRDLDRGCHLL 238
P GL++ P+RELA Q ++ + ++ Q +R C+ GG V + + + RG H++
Sbjct: 254 PYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGLPVSEALDVISRGVHIV 313
Query: 239 VATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLM 298
VATPGRL+DML++ + L CR+L +DEADRM+DMGFE +R I G RQTL+
Sbjct: 314 VATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFF----KGQRQTLL 369
Query: 299 FSATFPKEIQ 308
FSAT PK+IQ
Sbjct: 370 FSATMPKKIQ 379
Score = 160 (61.4 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 38/122 (31%), Positives = 63/122 (51%)
Query: 58 PLPP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
P PP F +++ + I N +A PTP+Q +P +++GRD++ A TGSGKT F
Sbjct: 172 PSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVF 231
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
++P++ E+ P + P GL++ P+RELA Q ++ + Y L+
Sbjct: 232 VLPVIMFALEQE--------YSLPFERNEGPYGLIICPSRELAKQTHEIIQH--YSKHLQ 281
Query: 176 PC 177
C
Sbjct: 282 AC 283
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 272 (100.8 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 76/207 (36%), Positives = 109/207 (52%)
Query: 109 SGKTAAFLVPILNQMYERG-PLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
S K F IL + ++G PTP +G P+ + + +A T T ++
Sbjct: 182 SFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDM-IGIAFTGSGKTLVFTLPVI 240
Query: 168 FAYRSQLRPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ------LRPCVVYGG 221
Q + K+ P GL++ P+RELA Q + + + Q LR + GG
Sbjct: 241 MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG 300
Query: 222 SNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRC 281
+V +QM + G H++VATPGRL+D+L++ + L CR+L LDEADRM+DMGFE IR
Sbjct: 301 MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT 360
Query: 282 IVQENGMPRTGDRQTLMFSATFPKEIQ 308
I G RQTL+FSAT PK+IQ
Sbjct: 361 IFSYF----KGQRQTLLFSATMPKKIQ 383
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP F +++ I + PTP+Q IP I+SGRD++ A TGSGKT F +
Sbjct: 178 PPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTL 237
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIY 162
P++ E+ + P K+ P GL++ P+RELA Q +
Sbjct: 238 PVIMFCLEQE--------KRLPFSKREGPYGLIICPSRELARQTH 274
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 272 (100.8 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 76/207 (36%), Positives = 109/207 (52%)
Query: 109 SGKTAAFLVPILNQMYERG-PLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
S K F IL + ++G PTP +G P+ + + +A T T ++
Sbjct: 182 SFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDM-IGIAFTGSGKTLVFTLPVI 240
Query: 168 FAYRSQLRPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ------LRPCVVYGG 221
Q + K+ P GL++ P+RELA Q + + + Q LR + GG
Sbjct: 241 MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG 300
Query: 222 SNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRC 281
+V +QM + G H++VATPGRL+D+L++ + L CR+L LDEADRM+DMGFE IR
Sbjct: 301 MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT 360
Query: 282 IVQENGMPRTGDRQTLMFSATFPKEIQ 308
I G RQTL+FSAT PK+IQ
Sbjct: 361 IFSYF----KGQRQTLLFSATMPKKIQ 383
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP F +++ I + PTP+Q IP I+SGRD++ A TGSGKT F +
Sbjct: 178 PPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTL 237
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIY 162
P++ E+ + P K+ P GL++ P+RELA Q +
Sbjct: 238 PVIMFCLEQE--------KRLPFSKREGPYGLIICPSRELARQTH 274
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 272 (100.8 bits), Expect = 8.4e-23, P = 8.4e-23
Identities = 76/207 (36%), Positives = 109/207 (52%)
Query: 109 SGKTAAFLVPILNQMYERG-PLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
S K F IL + ++G PTP +G P+ + + +A T T ++
Sbjct: 182 SFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDM-IGIAFTGSGKTLVFTLPVI 240
Query: 168 FAYRSQLRPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ------LRPCVVYGG 221
Q + K+ P GL++ P+RELA Q + + + Q LR + GG
Sbjct: 241 MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG 300
Query: 222 SNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRC 281
+V +QM + G H++VATPGRL+D+L++ + L CR+L LDEADRM+DMGFE IR
Sbjct: 301 MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT 360
Query: 282 IVQENGMPRTGDRQTLMFSATFPKEIQ 308
I G RQTL+FSAT PK+IQ
Sbjct: 361 IFSYF----KGQRQTLLFSATMPKKIQ 383
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP F +++ I + PTP+Q IP I+SGRD++ A TGSGKT F +
Sbjct: 178 PPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTL 237
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIY 162
P++ E+ + P K+ P GL++ P+RELA Q +
Sbjct: 238 PVIMFCLEQE--------KRLPFSKREGPYGLIICPSRELARQTH 274
>TAIR|locus:2167903 [details] [associations]
symbol:PRH75 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0001510 "RNA methylation" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0017151 "DEAD/H-box RNA helicase binding"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730
GO:GO:0003723 GO:GO:0016070 GO:GO:0017151 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB019235 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268805 EMBL:X99938 EMBL:AY039576 EMBL:AY056137
EMBL:BT008581 IPI:IPI00520493 RefSeq:NP_201025.1 UniGene:At.22598
ProteinModelPortal:Q39189 SMR:Q39189 IntAct:Q39189 STRING:Q39189
PaxDb:Q39189 PRIDE:Q39189 EnsemblPlants:AT5G62190.1 GeneID:836340
KEGG:ath:AT5G62190 GeneFarm:918 TAIR:At5g62190 InParanoid:Q39189
OMA:QCEPPRE PhylomeDB:Q39189 ProtClustDB:CLSN2687322
Genevestigator:Q39189 GermOnline:AT5G62190 Uniprot:Q39189
Length = 671
Score = 205 (77.2 bits), Expect = 9.0e-23, Sum P(2) = 9.0e-23
Identities = 49/124 (39%), Positives = 69/124 (55%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P LVL PTRELA Q+ + + L C +YGG + Q L RG ++V TPGR
Sbjct: 175 PSVLVLLPTRELAKQVAADFDAYGGSLGLSSCCLYGGDSYPVQEGKLKRGVDIVVGTPGR 234
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
+ D +ER + + +F VLDEAD ML MGF + I+ + + + QTL+FSAT P
Sbjct: 235 IKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGK--VEDSTKVQTLLFSATLP 292
Query: 305 KEIQ 308
++
Sbjct: 293 SWVK 296
Score = 121 (47.7 bits), Expect = 9.0e-23, Sum P(2) = 9.0e-23
Identities = 31/76 (40%), Positives = 43/76 (56%)
Query: 86 PVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKVF 145
P+Q +++ G D++ A+TG GKT AF++PIL + GP + GY R
Sbjct: 121 PIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVN-GPAKSKRK-MGY-GRS--- 174
Query: 146 PLGLVLAPTRELATQI 161
P LVL PTRELA Q+
Sbjct: 175 PSVLVLLPTRELAKQV 190
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 272 (100.8 bits), Expect = 9.0e-23, P = 9.0e-23
Identities = 76/207 (36%), Positives = 109/207 (52%)
Query: 109 SGKTAAFLVPILNQMYERG-PLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
S K F IL + ++G PTP +G P+ + + +A T T ++
Sbjct: 200 SFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDM-IGIAFTGSGKTLVFTLPVI 258
Query: 168 FAYRSQLRPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ------LRPCVVYGG 221
Q + K+ P GL++ P+RELA Q + + + Q LR + GG
Sbjct: 259 MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG 318
Query: 222 SNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRC 281
+V +QM + G H++VATPGRL+D+L++ + L CR+L LDEADRM+DMGFE IR
Sbjct: 319 MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT 378
Query: 282 IVQENGMPRTGDRQTLMFSATFPKEIQ 308
I G RQTL+FSAT PK+IQ
Sbjct: 379 IFSYF----KGQRQTLLFSATMPKKIQ 401
Score = 147 (56.8 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP F +++ I + PTP+Q IP I+SGRD++ A TGSGKT F +
Sbjct: 196 PPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTL 255
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIY 162
P++ E+ + P K+ P GL++ P+RELA Q +
Sbjct: 256 PVIMFCLEQE--------KRLPFSKREGPYGLIICPSRELARQTH 292
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 272 (100.8 bits), Expect = 9.3e-23, P = 9.3e-23
Identities = 76/207 (36%), Positives = 109/207 (52%)
Query: 109 SGKTAAFLVPILNQMYERG-PLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
S K F IL + ++G PTP +G P+ + + +A T T ++
Sbjct: 209 SFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDM-IGIAFTGSGKTLVFTLPVI 267
Query: 168 FAYRSQLRPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ------LRPCVVYGG 221
Q + K+ P GL++ P+RELA Q + + + Q LR + GG
Sbjct: 268 MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG 327
Query: 222 SNVGDQMRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRC 281
+V +QM + G H++VATPGRL+D+L++ + L CR+L LDEADRM+DMGFE IR
Sbjct: 328 MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT 387
Query: 282 IVQENGMPRTGDRQTLMFSATFPKEIQ 308
I G RQTL+FSAT PK+IQ
Sbjct: 388 IFSYF----KGQRQTLLFSATMPKKIQ 410
Score = 147 (56.8 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 60 PP--QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLV 117
PP F +++ I + PTP+Q IP I+SGRD++ A TGSGKT F +
Sbjct: 205 PPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTL 264
Query: 118 PILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIY 162
P++ E+ + P K+ P GL++ P+RELA Q +
Sbjct: 265 PVIMFCLEQE--------KRLPFSKREGPYGLIICPSRELARQTH 301
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 273 (101.2 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 54/125 (43%), Positives = 80/125 (64%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDL-DRGCHLLVATPG 243
P+ +++ PTRELA Q++ EAKKF + P YGG + +Q +L + G ++V TPG
Sbjct: 339 PVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVVCTPG 398
Query: 244 RLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATF 303
R++D+++ G FLV DEADRM DMGFE Q++ I ++ P DRQ LMFSATF
Sbjct: 399 RIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSI-SDHVRP---DRQCLMFSATF 454
Query: 304 PKEIQ 308
++++
Sbjct: 455 KQKVE 459
Score = 200 (75.5 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 46/120 (38%), Positives = 68/120 (56%)
Query: 58 PLPP-QFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFL 116
P P F +++ I + Y++PTP+Q AIP +SGRDV+ A+TGSGKTAA+L
Sbjct: 261 PRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYL 320
Query: 117 VPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRP 176
P + + ++ P AG G P+ +++ PTRELA Q++ EAKKF + P
Sbjct: 321 WPAIVHIMDQ---PDLKAGEG--------PVAVIVVPTRELAIQVFQEAKKFCKVYNINP 369
>FB|FBgn0015075 [details] [associations]
symbol:Ddx1 "Dead-box-1" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0006446 "regulation of translational initiation"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
[GO:0001700 "embryonic development via the syncytial blastoderm"
evidence=IEP] [GO:0000245 "spliceosomal complex assembly"
evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003877 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00622 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:AE014296 GO:GO:0001700 GO:GO:0003682 GO:GO:0042254
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0004527 GO:GO:0006302
GO:GO:0003712 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GO:GO:0004518 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0032508 GO:GO:0008143 EMBL:AF057167
GeneTree:ENSGT00660000095174 GO:GO:0033677 CTD:1653 KO:K13177
OMA:TLNNVKQ EMBL:U34773 EMBL:AY119661 RefSeq:NP_524212.2
UniGene:Dm.2501 ProteinModelPortal:Q9VNV3 SMR:Q9VNV3 IntAct:Q9VNV3
STRING:Q9VNV3 PaxDb:Q9VNV3 PRIDE:Q9VNV3 EnsemblMetazoa:FBtr0078492
GeneID:40457 KEGG:dme:Dmel_CG9054 UCSC:CG9054-RA
FlyBase:FBgn0015075 InParanoid:Q9VNV3 OrthoDB:EOG43FFBW
PhylomeDB:Q9VNV3 GenomeRNAi:40457 NextBio:818872 Bgee:Q9VNV3
GermOnline:CG9054 Uniprot:Q9VNV3
Length = 727
Score = 202 (76.2 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 47/123 (38%), Positives = 72/123 (58%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYR---SQLRPCVVYGGSNVGDQMRDLDRGCHLLVAT 241
P +++ P+RELA Q Y++ +KF Y ++R ++ GG + +Q L +G H++V T
Sbjct: 287 PQAIIMEPSRELAEQTYNQIEKFKYHLSNPEVRSLLLIGGVRLEEQKAQLMQGTHIVVGT 346
Query: 242 PGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQI-RCIVQENGMPRTGDR-QTLMF 299
PGRL +M+ G + L +CRF VLDEAD +L G+ I R Q + G R Q ++
Sbjct: 347 PGRLEEMINSGLVLLTHCRFFVLDEADALLKQGYTELIDRLHKQIPKITSDGRRLQMVVC 406
Query: 300 SAT 302
SAT
Sbjct: 407 SAT 409
Score = 125 (49.1 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 84 PTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYER-GPLPTPPAGRG 137
PT VQ AIP+I+ G DV+ A+TGSGKT AF +PIL ++E L AG+G
Sbjct: 25 PTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQIVWETLRDLEEGKAGKG 79
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 250 (93.1 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 53/115 (46%), Positives = 73/115 (63%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P ++LAPTRELA QI +E KF +R V GG + DQ L GC +++ATPGR
Sbjct: 456 PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGR 515
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQ----ENGMPRTGDRQ 295
L+D+LE + L+ C ++VLDEADRM+DMGFEP ++ I++ N P T D +
Sbjct: 516 LIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEYIPVTNQKPDTDDAE 570
Score = 173 (66.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 42/99 (42%), Positives = 57/99 (57%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
Y PTP+Q+ AIP+ + RD++ A+TGSGKTAAFL+P+L + P R S
Sbjct: 398 YKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWI-----TTLPKIDRIEDS 452
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
+ P ++LAPTRELA QI +E KF +R V
Sbjct: 453 DQG--PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAV 489
Score = 47 (21.6 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 294 RQTLMFSATFPKEIQ 308
RQT+MF+AT P ++
Sbjct: 587 RQTVMFTATMPPAVE 601
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 266 (98.7 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 57/125 (45%), Positives = 81/125 (64%)
Query: 180 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLV 239
+K PL +V++PTRELA QIYD+ KFA + ++ ++GG D+ R+ + ++V
Sbjct: 142 QKSCRPLAVVISPTRELAMQIYDQLVKFAEKVDIQVACIFGGVKK-DEQREALKSAAVVV 200
Query: 240 ATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMF 299
ATPGRL D+ G + L ++LVLDEADRMLD GFE I+ I+ MP RQT+MF
Sbjct: 201 ATPGRLKDLQNDGSLDLGRVKYLVLDEADRMLDKGFEQDIKDIISP--MP-VSKRQTVMF 257
Query: 300 SATFP 304
+AT+P
Sbjct: 258 TATWP 262
Score = 164 (62.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 39/99 (39%), Positives = 59/99 (59%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
+ PT +Q P++ +GRDV+ A+TGSGKT AF +P L ++ + L T
Sbjct: 93 FASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLD---LKT--------K 141
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR-PCV 178
+K PL +V++PTRELA QIYD+ KFA + ++ C+
Sbjct: 142 QKSCRPLAVVISPTRELAMQIYDQLVKFAEKVDIQVACI 180
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 246 (91.7 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 51/107 (47%), Positives = 71/107 (66%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P +++APTRELA QI +E KF +R VV GG + +Q L GC +++ATPGR
Sbjct: 472 PYAIIMAPTRELAQQIEEETTKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGR 531
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRT 291
L+D+LE + L C ++VLDEADRM+DMGFEP ++ I++ MP T
Sbjct: 532 LIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEY--MPVT 576
Score = 174 (66.3 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 40/99 (40%), Positives = 57/99 (57%)
Query: 81 YDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPS 140
Y +PTP+Q+ AIP+ + RD++ A+TGSGKT AFL+P+L+ + LP
Sbjct: 414 YKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQS---LPKIERLEDVDQ 470
Query: 141 RKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
P +++APTRELA QI +E KF +R VV
Sbjct: 471 G----PYAIIMAPTRELAQQIEEETTKFGQPLGIRTVVV 505
Score = 50 (22.7 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 283 VQENGMPRTGDRQTLMFSATFPKEIQ 308
+ EN + RQT+MF+AT P ++
Sbjct: 591 LMENFYTKKKYRQTVMFTATMPPAVE 616
>UNIPROTKB|H0Y960 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:18700 EMBL:AC016632 Ensembl:ENST00000503129
Uniprot:H0Y960
Length = 305
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 56/108 (51%), Positives = 76/108 (70%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F++ + + + NNIA A Y K TPVQKY+IP+I++GRD+MACAQTGSGKTAAFL+PIL
Sbjct: 196 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 255
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAY 170
M G A R + ++ P +++APTREL QIY EA+KF++
Sbjct: 256 MMHDGIT----ASR-FKELQE--PECIIVAPTRELVNQIYLEARKFSF 296
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 248 (92.4 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 51/105 (48%), Positives = 70/105 (66%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P ++LAPTRELA QI +E KF +R V GG + DQ L GC +++ATPGR
Sbjct: 468 PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGR 527
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMP 289
L+D+LE + L+ C ++VLDEADRM+DMGFEP ++ I++ MP
Sbjct: 528 LIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEH--MP 570
Score = 176 (67.0 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 47/124 (37%), Positives = 67/124 (54%)
Query: 57 LPLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P + + D + I I Y +PTP+Q+ AIP+ + RD++ A+TGSGKTAAF
Sbjct: 385 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 444
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
L+P+L + P R S + P ++LAPTRELA QI +E KF +R
Sbjct: 445 LIPLLVWI-----TTLPKIDRIEESDQG--PYAIILAPTRELAQQIEEETIKFGKPLGIR 497
Query: 176 PCVV 179
V
Sbjct: 498 TVAV 501
Score = 47 (21.6 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 294 RQTLMFSATFPKEIQ 308
RQT+MF+AT P ++
Sbjct: 599 RQTVMFTATMPPAVE 613
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 248 (92.4 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 51/105 (48%), Positives = 70/105 (66%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P ++LAPTRELA QI +E KF +R V GG + DQ L GC +++ATPGR
Sbjct: 469 PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGR 528
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMP 289
L+D+LE + L+ C ++VLDEADRM+DMGFEP ++ I++ MP
Sbjct: 529 LIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEH--MP 571
Score = 176 (67.0 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 47/124 (37%), Positives = 67/124 (54%)
Query: 57 LPLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P + + D + I I Y +PTP+Q+ AIP+ + RD++ A+TGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
L+P+L + P R S + P ++LAPTRELA QI +E KF +R
Sbjct: 446 LIPLLVWI-----TTLPKIDRIEESDQG--PYAIILAPTRELAQQIEEETIKFGKPLGIR 498
Query: 176 PCVV 179
V
Sbjct: 499 TVAV 502
Score = 47 (21.6 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 294 RQTLMFSATFPKEIQ 308
RQT+MF+AT P ++
Sbjct: 600 RQTVMFTATMPPAVE 614
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 248 (92.4 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 51/105 (48%), Positives = 70/105 (66%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P ++LAPTRELA QI +E KF +R V GG + DQ L GC +++ATPGR
Sbjct: 469 PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGR 528
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMP 289
L+D+LE + L+ C ++VLDEADRM+DMGFEP ++ I++ MP
Sbjct: 529 LIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEH--MP 571
Score = 176 (67.0 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 47/124 (37%), Positives = 67/124 (54%)
Query: 57 LPLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P + + D + I I Y +PTP+Q+ AIP+ + RD++ A+TGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
L+P+L + P R S + P ++LAPTRELA QI +E KF +R
Sbjct: 446 LIPLLVWI-----TTLPKIDRIEESDQG--PYAIILAPTRELAQQIEEETIKFGKPLGIR 498
Query: 176 PCVV 179
V
Sbjct: 499 TVAV 502
Score = 47 (21.6 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 294 RQTLMFSATFPKEIQ 308
RQT+MF+AT P ++
Sbjct: 600 RQTVMFTATMPPAVE 614
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 248 (92.4 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 51/105 (48%), Positives = 70/105 (66%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P ++LAPTRELA QI +E KF +R V GG + DQ L GC +++ATPGR
Sbjct: 469 PYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGR 528
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMP 289
L+D+LE + L+ C ++VLDEADRM+DMGFEP ++ I++ MP
Sbjct: 529 LIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEH--MP 571
Score = 176 (67.0 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 47/124 (37%), Positives = 67/124 (54%)
Query: 57 LPLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P + + D + I I Y +PTP+Q+ AIP+ + RD++ A+TGSGKTAAF
Sbjct: 386 IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAF 445
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLR 175
L+P+L + P R S + P ++LAPTRELA QI +E KF +R
Sbjct: 446 LIPLLVWI-----TTLPKIDRIEESDQG--PYAIILAPTRELAQQIEEETIKFGKPLGIR 498
Query: 176 PCVV 179
V
Sbjct: 499 TVAV 502
Score = 47 (21.6 bits), Expect = 2.9e-22, Sum P(2) = 2.9e-22
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 294 RQTLMFSATFPKEIQ 308
RQT+MF+AT P ++
Sbjct: 600 RQTVMFTATMPPAVE 614
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 267 (99.0 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 60/134 (44%), Positives = 87/134 (64%)
Query: 175 RPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRG 234
+P + R + P LVL PTRELA Q+ E +++YR L+ +YGG + Q++DL +G
Sbjct: 306 QPVLQRARNGPGMLVLTPTRELALQVDAECSEYSYRG-LKSVCIYGGGDRDGQIKDLSKG 364
Query: 235 CHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDR 294
+++ATPGRL D+ + L + +LVLDEAD+MLDMGFEPQI I+ + P DR
Sbjct: 365 ADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILLDV-RP---DR 420
Query: 295 QTLMFSATFPKEIQ 308
QT+M SAT+P ++
Sbjct: 421 QTVMTSATWPYAVR 434
Score = 166 (63.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 45/125 (36%), Positives = 64/125 (51%)
Query: 58 PLP-P--QFDD-IQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTA 113
PLP P F+D + NI A + KPTP+Q A P+I+ G D++ AQTG+GKT
Sbjct: 234 PLPNPTCNFEDAFHCYPEVMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTL 293
Query: 114 AFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ 173
++L+P + + P R P LVL PTRELA Q+ E +++YR
Sbjct: 294 SYLMPGFIHIDSQ---PVLQRARNGPGM-------LVLTPTRELALQVDAECSEYSYRGL 343
Query: 174 LRPCV 178
C+
Sbjct: 344 KSVCI 348
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 268 (99.4 bits), Expect = 3.3e-22, P = 3.3e-22
Identities = 63/154 (40%), Positives = 88/154 (57%)
Query: 169 AYRSQLRPCVVRKKVF-PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQ 227
AY S+L P + P +V+APTRELA QI +E KFA+ R + GG ++ +Q
Sbjct: 373 AYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQ 432
Query: 228 MRDLDRGCHLLVATPGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQ--- 284
+ +GC +++ATPGRL+D LER L C ++VLDEADRM+DMGFEPQ+ ++
Sbjct: 433 GLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVLDAMP 492
Query: 285 -ENGMPRTGD---------RQTLMFSATFPKEIQ 308
N P + R T MFSAT P ++
Sbjct: 493 SSNLKPENEEEELDEKKIYRTTYMFSATMPPGVE 526
Score = 187 (70.9 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 44/115 (38%), Positives = 68/115 (59%)
Query: 57 LPLPPQ-FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAF 115
+P P + +++ ++T + + A Y KP+P+Q AIP+ + RDV+ A+TGSGKTAAF
Sbjct: 308 IPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAF 367
Query: 116 LVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAY 170
++P+L + P+ G P +V+APTRELA QI +E KFA+
Sbjct: 368 VLPMLAYISRLPPMSEENETEG--------PYAVVMAPTRELAQQIEEETVKFAH 414
>UNIPROTKB|J3KT12 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
ProteinModelPortal:J3KT12 Ensembl:ENST00000582746 Uniprot:J3KT12
Length = 341
Score = 180 (68.4 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 48/123 (39%), Positives = 66/123 (53%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YR-SQLRPCVVYGGSNVGDQMRDLDRGC-HLLVATPGR 244
LVLAPTRELA QI Y + C+ GG+NV +++ L H++V TPGR
Sbjct: 104 LVLAPTRELAQQIQKVVMALGDYMGASCHACI--GGTNVRAEVQKLQMEAPHIIVGTPGR 161
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
+ DML R + + VLDEAD ML GF+ QI I Q+ + Q ++ SAT P
Sbjct: 162 VFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQK----LNSNTQVVLLSATMP 217
Query: 305 KEI 307
++
Sbjct: 218 SDV 220
Score = 135 (52.6 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 40/99 (40%), Positives = 54/99 (54%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
FDD+ ++E + I ++KP+ +Q+ AI I G DV+A AQ+G+GKTA F + IL Q
Sbjct: 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQ 93
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
+ E T LVLAPTRELA QI
Sbjct: 94 I-ELDLKATQ---------------ALVLAPTRELAQQI 116
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 266 (98.7 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 57/124 (45%), Positives = 83/124 (66%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
PL LVLAPTRELA Q+ E ++ A L +YGG+ +G QMR LD G + V TPGR
Sbjct: 179 PLCLVLAPTRELARQVEKEFRESA--PSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPGR 236
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
++D+++RG + L+ +F+VLDEAD+ML +GF + I+++ +P RQ++MFSAT P
Sbjct: 237 VIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEK--LPEK--RQSMMFSATMP 292
Query: 305 KEIQ 308
I+
Sbjct: 293 SWIR 296
Score = 133 (51.9 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 36/88 (40%), Positives = 53/88 (60%)
Query: 82 DKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSR 141
+K P+QK + + GRD++ A+TG+GKT AF +PI++++ + GRG R
Sbjct: 125 EKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNA----KHGRG---R 177
Query: 142 KKVFPLGLVLAPTRELATQIYDEAKKFA 169
PL LVLAPTRELA Q+ E ++ A
Sbjct: 178 N---PLCLVLAPTRELARQVEKEFRESA 202
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 265 (98.3 bits), Expect = 5.0e-22, P = 5.0e-22
Identities = 69/179 (38%), Positives = 100/179 (55%)
Query: 130 PTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVRKKVFPLGLV 189
PTP + +P + L +V+A T T Y SQ P ++ P LV
Sbjct: 245 PTPIQSQAWPIILQGIDL-IVVAQTGTGKTLSYLMPGFIHLDSQ--PISREQRNGPGMLV 301
Query: 190 LAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVDML 249
L PTRELA + E K++Y+ L+ +YGG N Q+ D+ +G +++ATPGRL D+
Sbjct: 302 LTPTRELALHVEAECSKYSYKG-LKSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQ 360
Query: 250 ERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEIQ 308
+ L + +LV+DEAD+MLDM FEPQIR I+ + P DRQT+M SAT+P ++
Sbjct: 361 MNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDV-RP---DRQTVMTSATWPDTVR 415
Score = 154 (59.3 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 43/125 (34%), Positives = 64/125 (51%)
Query: 56 LLPLPP-QFDD-IQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTA 113
L+P P +F D Q + +I KPTP+Q A P+I+ G D++ AQTG+GKT
Sbjct: 215 LIPKPTCRFKDAFQQYPDLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTL 274
Query: 114 AFLVPILNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQ 173
++L+P L + P R ++ P LVL PTRELA + E K++Y+
Sbjct: 275 SYLMPGFIH------LDSQPISR----EQRNGPGMLVLTPTRELALHVEAECSKYSYKGL 324
Query: 174 LRPCV 178
C+
Sbjct: 325 KSICI 329
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 264 (98.0 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 56/128 (43%), Positives = 78/128 (60%)
Query: 182 KVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVAT 241
K P LV++PTRELA Q Y+ + L+ VVYGG+ +Q R + +++ T
Sbjct: 234 KSVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQARAA-KNASVIIGT 292
Query: 242 PGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMP-RTGDRQTLMFS 300
PGRL+D++ G I + +LVLDEADRMLD GFE IR I+ P R G RQT+ FS
Sbjct: 293 PGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHTPDPTRNGSRQTVFFS 352
Query: 301 ATFPKEIQ 308
AT+P+ ++
Sbjct: 353 ATWPESVR 360
Score = 172 (65.6 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 57/179 (31%), Positives = 85/179 (47%)
Query: 2 SYESN-QNGTGLEQQLAGLDLSAKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLPLP 60
S E N + G + Q G +A + + R Y+ H N S++ LLP+
Sbjct: 113 SIEINAEEGAKIAQPAIG-SANASNHNDEEAYDR-YIKKH--NISFADPKSSEN-LLPIL 167
Query: 61 PQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPIL 120
QFD++ ++ + L Y +PTP+Q P +++GRDV+ A+TGSGKT AF +P L
Sbjct: 168 -QFDELDVSAKLREG--LKNYKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPAL 224
Query: 121 NQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
+ G K V P LV++PTRELA Q Y+ + L+ VV
Sbjct: 225 QYL------------NGLSDNKSV-PRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVV 270
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 261 (96.9 bits), Expect = 5.2e-22, P = 5.2e-22
Identities = 56/121 (46%), Positives = 77/121 (63%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLV 246
LVL PTRELA Q+ E ++ A + ++ + GG G Q+ L+ G H+++ TPGRL+
Sbjct: 76 LVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGAHVVIGTPGRLL 135
Query: 247 DMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
D L RG + L+ R LVLDEADRMLDMGF+ I ++ P+ RQTL+FSAT+P
Sbjct: 136 DHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAA-APPK---RQTLLFSATYPDS 191
Query: 307 I 307
I
Sbjct: 192 I 192
Score = 147 (56.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 38/110 (34%), Positives = 63/110 (57%)
Query: 60 PPQFDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPI 119
P F +++ + N+A Y + TP+Q +++P+I++G+DV+A A+TGSGKTAAF + +
Sbjct: 3 PKAFSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGL 62
Query: 120 LNQMYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFA 169
L+++ R + LVL PTRELA Q+ E ++ A
Sbjct: 63 LSRL------------DALSFRVQA----LVLCPTRELADQVGKELRRLA 96
>SGD|S000000441 [details] [associations]
symbol:PRP5 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000348 "mRNA branch
site recognition" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000000441 GO:GO:0005524
GO:GO:0005681 EMBL:BK006936 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GeneTree:ENSGT00610000086076 KO:K12811 HOGENOM:HOG000007229
GO:GO:0000348 OMA:SLVIIYN OrthoDB:EOG40CMR1 EMBL:M33191 EMBL:Z36106
EMBL:AY692817 PIR:A35791 RefSeq:NP_009796.1
ProteinModelPortal:P21372 SMR:P21372 DIP:DIP-88N IntAct:P21372
MINT:MINT-403988 STRING:P21372 PaxDb:P21372 EnsemblFungi:YBR237W
GeneID:852539 KEGG:sce:YBR237W CYGD:YBR237w NextBio:971604
Genevestigator:P21372 GermOnline:YBR237W Uniprot:P21372
Length = 849
Score = 267 (99.0 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 63/139 (45%), Positives = 92/139 (66%)
Query: 175 RPCVVRKKVFPLGLVLAPTRELATQIYDEAKKFAYR-SQLRPCVVYGGSNVGDQMRDLDR 233
RP + + + P+GL+LAPTRELA QI++E KF + +R GGS + Q+ DL R
Sbjct: 322 RP-LSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKR 380
Query: 234 GCHLLVATPGRLVDML--ERGKIGLANCR--FLVLDEADRMLDMGFEPQIRCIVQENGMP 289
G ++VATPGR +D+L GK+ L+ R F+V+DEADR+ D+GFEPQI I++ P
Sbjct: 381 GTEIVVATPGRFIDILTLNDGKL-LSTKRITFVVMDEADRLFDLGFEPQITQIMK-TVRP 438
Query: 290 RTGDRQTLMFSATFPKEIQ 308
D+Q ++FSATFP +++
Sbjct: 439 ---DKQCVLFSATFPNKLR 454
Score = 192 (72.6 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 85 TPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKV 144
TP+Q A+P I+SGRDV+ ++TGSGKT ++L+P+L Q+ + PL S+ +
Sbjct: 280 TPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPL----------SKHET 329
Query: 145 FPLGLVLAPTRELATQIYDEAKKF 168
P+GL+LAPTRELA QI++E KF
Sbjct: 330 GPMGLILAPTRELALQIHEEVTKF 353
>UNIPROTKB|I3L840 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025310 Uniprot:I3L840
Length = 667
Score = 196 (74.1 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 46/122 (37%), Positives = 76/122 (62%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L+L+PTRELA Q + K+ ++ GGSN + + L G +++VATPGRL+D
Sbjct: 252 LILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGINIVVATPGRLLD 311
Query: 248 MLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
++ N + LV+DEADR+LD+GFE +++ I++ +P RQT++FSAT ++
Sbjct: 312 HMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKL--LPTR--RQTMLFSATQTRK 367
Query: 307 IQ 308
++
Sbjct: 368 VE 369
Score = 125 (49.1 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 48/163 (29%), Positives = 71/163 (43%)
Query: 17 AGLDLS-AKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLPLP----PQFDDIQ---M 68
AG D AK E P N DT + LP F+D +
Sbjct: 120 AGPDSKKAKTEDKGEPGDSAQAPEETENSMEKPDKDDDTEVPSLPLGLTGAFEDTSFASL 179
Query: 69 TEIITNNIALA----RYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMY 124
T+++ N A + T +Q +I ++ GRD++A A+TGSGKT AFL+P + +
Sbjct: 180 TDLVNENTLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIV 239
Query: 125 ERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
+ +P G G L+L+PTRELA Q + K+
Sbjct: 240 KLRFMPRN--GTGV----------LILSPTRELAMQTFGVLKE 270
>UNIPROTKB|F1RY13 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000017112 Uniprot:F1RY13
Length = 671
Score = 196 (74.1 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 46/122 (37%), Positives = 76/122 (62%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L+L+PTRELA Q + K+ ++ GGSN + + L G +++VATPGRL+D
Sbjct: 256 LILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGINIVVATPGRLLD 315
Query: 248 MLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
++ N + LV+DEADR+LD+GFE +++ I++ +P RQT++FSAT ++
Sbjct: 316 HMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKL--LPTR--RQTMLFSATQTRK 371
Query: 307 IQ 308
++
Sbjct: 372 VE 373
Score = 125 (49.1 bits), Expect = 6.2e-22, Sum P(2) = 6.2e-22
Identities = 48/163 (29%), Positives = 71/163 (43%)
Query: 17 AGLDLS-AKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLPLP----PQFDDIQ---M 68
AG D AK E P N DT + LP F+D +
Sbjct: 124 AGPDSKKAKTEDKGEPGDSAQAPEETENSMEKPDKDDDTEVPSLPLGLTGAFEDTSFASL 183
Query: 69 TEIITNNIALA----RYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMY 124
T+++ N A + T +Q +I ++ GRD++A A+TGSGKT AFL+P + +
Sbjct: 184 TDLVNENTLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIV 243
Query: 125 ERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
+ +P G G L+L+PTRELA Q + K+
Sbjct: 244 KLRFMPRN--GTGV----------LILSPTRELAMQTFGVLKE 274
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 190 (71.9 bits), Expect = 6.7e-22, Sum P(2) = 6.7e-22
Identities = 48/120 (40%), Positives = 65/120 (54%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L+LAPTRELA QI + GG+ V D M L G H++V TPGR+ D
Sbjct: 91 LILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHVVVGTPGRVHD 150
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
M++R + + VLDEAD ML GF+ QI I Q +P T Q ++ SAT P+++
Sbjct: 151 MIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQL--LPPTA--QVVLLSATMPQDV 206
Score = 123 (48.4 bits), Expect = 6.7e-22, Sum P(2) = 6.7e-22
Identities = 36/99 (36%), Positives = 55/99 (55%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
FDD+ + + I +++P+ +Q+ AI I+ RDV+A AQ+G+GKTA F + +L +
Sbjct: 21 FDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTATFSISVLQK 80
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
+ T S K+ L+LAPTRELA QI
Sbjct: 81 ------IDT--------SLKQC--QALILAPTRELAQQI 103
>UNIPROTKB|E2R316 [details] [associations]
symbol:DDX55 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313
Pfam:PF13959 Ensembl:ENSCAFT00000035837 Uniprot:E2R316
Length = 483
Score = 197 (74.4 bits), Expect = 6.8e-22, Sum P(2) = 6.8e-22
Identities = 55/130 (42%), Positives = 78/130 (60%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRS--QLRPCVVYGGSNVGDQM-RDLDRGCHLLVATPGR 244
+++ PTRELA Q+ DE +S Q + GG N D + R ++G +++VATPGR
Sbjct: 86 IIITPTRELAIQV-DEVLAHFTKSFPQFSQILWIGGRNPADDVSRFKEQGGNIIVATPGR 144
Query: 245 LVDMLERGKIGL--ANC----RFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLM 298
L DM R GL A+C LVLDEADR+LDMGFE I I++ +P+ R+T +
Sbjct: 145 LEDMFRRKVEGLDLASCVKSLEVLVLDEADRLLDMGFEASINTILEF--LPK--QRRTGL 200
Query: 299 FSATFPKEIQ 308
FSAT +E++
Sbjct: 201 FSATQTQEVE 210
Score = 118 (46.6 bits), Expect = 6.8e-22, Sum P(2) = 6.8e-22
Identities = 33/81 (40%), Positives = 45/81 (55%)
Query: 85 TPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPTPPAGRGYPSRKKV 144
TPVQ IP+ + +DV A A TGSGKT AF++PIL + R + K
Sbjct: 33 TPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRR------------EEKLKK 80
Query: 145 FPLG-LVLAPTRELATQIYDE 164
+G +++ PTRELA Q+ DE
Sbjct: 81 NQVGAIIITPTRELAIQV-DE 100
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 262 (97.3 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 57/124 (45%), Positives = 80/124 (64%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGR 244
P L+L PTRELA Q+ + +K+ +L ++ GG + +Q L RG +L+ATPGR
Sbjct: 76 PRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQRGVDVLIATPGR 135
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFP 304
L+D +RGK+ + L++DEADRMLDMGF P I I + +P +RQTL+FSATFP
Sbjct: 136 LMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAK--LP--ANRQTLLFSATFP 191
Query: 305 KEIQ 308
+IQ
Sbjct: 192 TDIQ 195
Score = 166 (63.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 41/106 (38%), Positives = 62/106 (58%)
Query: 63 FDDIQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQ 122
F D + E I + + Y PTP+Q+ AIP I+ G DV AQTG+GKTAAF++P++ +
Sbjct: 6 FADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQR 65
Query: 123 MYERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKF 168
+ GR +R ++ P L+L PTRELA Q+ + +K+
Sbjct: 66 L---------STGR---ARARM-PRCLILCPTRELAAQVAENFEKY 98
>UNIPROTKB|I3L7B7 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00680000100037 EMBL:CU406995
Ensembl:ENSSSCT00000025125 Uniprot:I3L7B7
Length = 696
Score = 196 (74.1 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 46/122 (37%), Positives = 76/122 (62%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
L+L+PTRELA Q + K+ ++ GGSN + + L G +++VATPGRL+D
Sbjct: 281 LILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEAQKLANGINIVVATPGRLLD 340
Query: 248 MLERGK-IGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKE 306
++ N + LV+DEADR+LD+GFE +++ I++ +P RQT++FSAT ++
Sbjct: 341 HMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKL--LPTR--RQTMLFSATQTRK 396
Query: 307 IQ 308
++
Sbjct: 397 VE 398
Score = 125 (49.1 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 48/163 (29%), Positives = 71/163 (43%)
Query: 17 AGLDLS-AKKESAPGSNPRVYVPPHLRNQPSGGRNSTDTFLLPLP----PQFDDIQ---M 68
AG D AK E P N DT + LP F+D +
Sbjct: 149 AGPDSKKAKTEDKGEPGDSAQAPEETENSMEKPDKDDDTEVPSLPLGLTGAFEDTSFASL 208
Query: 69 TEIITNNIALA----RYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMY 124
T+++ N A + T +Q +I ++ GRD++A A+TGSGKT AFL+P + +
Sbjct: 209 TDLVNENTLRAIKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIV 268
Query: 125 ERGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKK 167
+ +P G G L+L+PTRELA Q + K+
Sbjct: 269 KLRFMPRN--GTGV----------LILSPTRELAMQTFGVLKE 299
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 259 (96.2 bits), Expect = 7.5e-22, P = 7.5e-22
Identities = 59/121 (48%), Positives = 78/121 (64%)
Query: 188 LVLAPTRELATQIYDEAKKFAYRSQLRPCVVYGGSNVGDQMRDLDRGCHLLVATPGRLVD 247
LV+APTRELA QI D +++LR VYGG V Q++ L G ++VA PGRL+D
Sbjct: 74 LVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAGAEVVVACPGRLLD 133
Query: 248 MLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRTGDRQTLMFSATFPKEI 307
+ +G I L+ LVLDEAD+M DMGF P IR +++ PR RQTL+FSAT P +I
Sbjct: 134 HIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLP-PR---RQTLLFSATMPIDI 189
Query: 308 Q 308
+
Sbjct: 190 R 190
Score = 189 (71.6 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 48/108 (44%), Positives = 66/108 (61%)
Query: 72 ITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYERGPLPT 131
+ IA A Y+ PTP+Q AIP +++GRDVM AQTG+GKTAAF +PIL+++ ++G
Sbjct: 12 VATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILHRL-QQGE--- 67
Query: 132 PPAGRGYPSRKKVFPLGLVLAPTRELATQIYDEAKKFAYRSQLRPCVV 179
RG R + LV+APTRELA QI D +++LR V
Sbjct: 68 ----RG---RVRA----LVIAPTRELAEQINDSFVTLGRQTRLRSVTV 104
>UNIPROTKB|Q0IIK5 [details] [associations]
symbol:DDX1 "ATP-dependent RNA helicase DDX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0033677
"DNA/RNA helicase activity" evidence=ISS] [GO:0008143 "poly(A) RNA
binding" evidence=ISS] [GO:0071920 "cleavage body" evidence=ISS]
[GO:0072669 "tRNA-splicing ligase complex" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004518 "nuclease activity" evidence=ISS] [GO:0003712
"transcription cofactor activity" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
evidence=ISS] [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003877 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00622 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0006397 GO:GO:0006351
GO:GO:0003682 GO:GO:0009615 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0003725 GO:GO:0004527 GO:GO:0006302 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0072669
GO:GO:0004518 GO:GO:0010494 GO:GO:0008026 GO:GO:0043330
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0032508
GO:GO:0008143 GO:GO:0071920 GeneTree:ENSGT00660000095174
GO:GO:0033677 EMBL:BC122599 IPI:IPI00716534 RefSeq:NP_001068936.1
UniGene:Bt.1784 ProteinModelPortal:Q0IIK5 STRING:Q0IIK5
PRIDE:Q0IIK5 Ensembl:ENSBTAT00000013075 GeneID:510816
KEGG:bta:510816 CTD:1653 HOVERGEN:HBG005462 InParanoid:Q0IIK5
KO:K13177 OMA:TLNNVKQ OrthoDB:EOG46HG95 NextBio:20869630
ArrayExpress:Q0IIK5 Uniprot:Q0IIK5
Length = 740
Score = 200 (75.5 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 51/125 (40%), Positives = 72/125 (57%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFA-Y--RSQLRPCVVYGGSNVGDQMRDLDRGCHLLVAT 241
P L++ P+RELA Q + K+F Y +LR ++ GG DQ+ LD G ++V T
Sbjct: 287 PKALIVEPSRELAEQTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGT 346
Query: 242 PGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRT---GDR-QTL 297
PGRL D++ GK+ L+ RFLVLDEAD +L G+ I I N +P+ G R Q +
Sbjct: 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRI--HNQIPQITSDGKRLQVI 404
Query: 298 MFSAT 302
+ SAT
Sbjct: 405 VCSAT 409
Score = 120 (47.3 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 84 PTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYE 125
PT +Q +IP+I+ G DV+ A+TGSGKT AF +P++ +YE
Sbjct: 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66
Score = 53 (23.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 146 PLGLVLAPTRELATQIYDEAKKF 168
P L++ P+RELA Q + K+F
Sbjct: 287 PKALIVEPSRELAEQTLNNVKQF 309
Score = 40 (19.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 5/8 (62%), Positives = 8/8 (100%)
Query: 37 VPPHLRNQ 44
+PPH++NQ
Sbjct: 218 IPPHMKNQ 225
>UNIPROTKB|F6V659 [details] [associations]
symbol:DDX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003877 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00622 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 CTD:1653 KO:K13177
OMA:TLNNVKQ Ensembl:ENSCAFT00000005957 EMBL:AAEX03010740
EMBL:AAEX03010739 RefSeq:XP_848865.1 GeneID:475671 KEGG:cfa:475671
Uniprot:F6V659
Length = 740
Score = 200 (75.5 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 51/125 (40%), Positives = 72/125 (57%)
Query: 185 PLGLVLAPTRELATQIYDEAKKFA-Y--RSQLRPCVVYGGSNVGDQMRDLDRGCHLLVAT 241
P L++ P+RELA Q + K+F Y +LR ++ GG DQ+ LD G ++V T
Sbjct: 287 PKALIVEPSRELAEQTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGT 346
Query: 242 PGRLVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQIRCIVQENGMPRT---GDR-QTL 297
PGRL D++ GK+ L+ RFLVLDEAD +L G+ I I N +P+ G R Q +
Sbjct: 347 PGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRI--HNQIPQITSDGKRLQVI 404
Query: 298 MFSAT 302
+ SAT
Sbjct: 405 VCSAT 409
Score = 120 (47.3 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 84 PTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYE 125
PT +Q +IP+I+ G DV+ A+TGSGKT AF +P++ +YE
Sbjct: 25 PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE 66
Score = 53 (23.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 146 PLGLVLAPTRELATQIYDEAKKF 168
P L++ P+RELA Q + K+F
Sbjct: 287 PKALIVEPSRELAEQTLNNVKQF 309
Score = 40 (19.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 5/8 (62%), Positives = 8/8 (100%)
Query: 37 VPPHLRNQ 44
+PPH++NQ
Sbjct: 218 IPPHMKNQ 225
>UNIPROTKB|J3QLN6 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000583802
Uniprot:J3QLN6
Length = 163
Score = 160 (61.4 bits), Expect = 8.1e-22, Sum P(2) = 8.1e-22
Identities = 41/95 (43%), Positives = 53/95 (55%)
Query: 188 LVLAPTRELATQIYDEAKKFA-YR-SQLRPCVVYGGSNVGDQMRDLDRGC-HLLVATPGR 244
LVLAPTRELA QI Y + C+ GG+NV +++ L H++V TPGR
Sbjct: 68 LVLAPTRELAQQIQKVVMALGDYMGASCHACI--GGTNVRAEVQKLQMEAPHIIVGTPGR 125
Query: 245 LVDMLERGKIGLANCRFLVLDEADRMLDMGFEPQI 279
+ DML R + + VLDEAD ML GF+ QI
Sbjct: 126 VFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 160
Score = 117 (46.2 bits), Expect = 8.1e-22, Sum P(2) = 8.1e-22
Identities = 37/96 (38%), Positives = 51/96 (53%)
Query: 66 IQMTEIITNNIALARYDKPTPVQKYAIPVIISGRDVMACAQTGSGKTAAFLVPILNQMYE 125
+ ++E + I ++KP+ +Q+ AI I G DV+A AQ+G+GKTA F + IL Q+ E
Sbjct: 1 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQI-E 59
Query: 126 RGPLPTPPAGRGYPSRKKVFPLGLVLAPTRELATQI 161
T LVLAPTRELA QI
Sbjct: 60 LDLKATQ---------------ALVLAPTRELAQQI 80
WARNING: HSPs involving 581 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 308 308 0.00078 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 831
No. of states in DFA: 568 (60 KB)
Total size of DFA: 182 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.20u 0.09s 25.29t Elapsed: 00:00:17
Total cpu time: 25.25u 0.09s 25.34t Elapsed: 00:00:17
Start: Thu Aug 15 16:09:23 2013 End: Thu Aug 15 16:09:40 2013
WARNINGS ISSUED: 2