RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy12777
(697 letters)
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation,
pyroglutamation, eight-membered R peptide bond,
hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Length = 238
Score = 188 bits (480), Expect = 2e-55
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 15/173 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IVGG +A ++PWQ+S+R +S+ H CG ++ N+ W V AAHC++ P+ + L +G
Sbjct: 1 IVGGIEARPYEFPWQVSVR--RKSSDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVG 58
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
EHD S Q V + + +DP T E D+++++ + F N+ PIC P+
Sbjct: 59 EHDSSAASTVR--QTHDVDSIFVNENYDPATLENDVSVIKTAVAITFDINVGPICAPDPA 116
Query: 511 TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM-------ATCWNHFLGNRI 556
++V + +GWG + G PA + + A C + + I
Sbjct: 117 NDYVYRKSQCSGWGTINSG----GVCCPAVLRYVTLNITTNAFCDAVYTSDTI 165
Score = 81.9 bits (203), Expect = 1e-17
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
IVGG +A ++PWQ+S+R +S+ H CG ++ N+ W V AAHC++
Sbjct: 1 IVGGIEARPYEFPWQVSVR--RKSSDSHFCGGSIINDRWVVCAAHCMQG 47
Score = 58.0 bits (141), Expect = 1e-09
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 639 PLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSF--DSC 687
P+VL+ V++ + N+ C+ +Y + + I + ICA G DSC
Sbjct: 138 CCPAVLRYVTLNITTNAFCDAVYTS----DTIYDDMICATDNTGMTDRDSC 184
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine
proteinase, C-terminal peptidase; 2.35A {Bos taurus}
SCOP: b.47.1.2
Length = 251
Score = 188 bits (481), Expect = 2e-55
Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 381 CGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 437
CG +F S+R+VGGE A WPWQISL+ +T+ H CG L N +TAAHC+
Sbjct: 1 CGAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCI 60
Query: 438 EDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF 497
+ + LG+++L E+E G V + H +++ D+AL++ E V+
Sbjct: 61 SN--TLTYRVALGKNNLEVEDEA-GSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVEL 117
Query: 498 QPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
I C+P + + VTGWGRLY
Sbjct: 118 GDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTN 150
Score = 92.7 bits (231), Expect = 3e-21
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 553 GNRILFP--SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
G I P S+R+VGGE A WPWQISL+ +T+ H CG L N +TAAHC+
Sbjct: 2 GAPIFQPNLSARVVGGEDAIPHSWPWQISLQYLRDNTWRHTCGGTLITPNHVLTAAHCIS 61
Query: 611 D 611
+
Sbjct: 62 N 62
Score = 55.3 bits (134), Expect = 1e-08
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+GP+ + LQ+ PV++ + C + E +CAG G +C
Sbjct: 150 NGPIAAELQQGLQPVVDYATCSQRDWWGT---TVKETMVCAGG-DGVISAC 196
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate
immunity, melanin, immune system binding complex; HET:
NAG FUC; 2.00A {Holotrichia diomphalia}
Length = 394
Score = 189 bits (481), Expect = 7e-54
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 9/159 (5%)
Query: 380 VCGRR--LFPSSRIVGG-EKATFGKWPWQISLRQW----IRSTYLHKCGAALFNENWAVT 432
CG R +I G +A +G++PW +++ + CG +L + +T
Sbjct: 117 FCGIRNERGLDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLT 176
Query: 433 AAHCVEDVP--PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLR 490
AHCV + +R GE D TE+E YQER+++ V H F+P+T D+ALL
Sbjct: 177 GAHCVNSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLL 236
Query: 491 FYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEG 529
P+ NI IC+P+ F T +GWG+ G
Sbjct: 237 LDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFG 275
Score = 73.7 bits (181), Expect = 4e-14
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 559 PSSRIVGG-EKATFGKWPWQISLRQW----IRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
+I G +A +G++PW +++ + CG +L + +T AHCV
Sbjct: 126 LDFKITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQ 185
Query: 614 S 614
S
Sbjct: 186 S 186
Score = 62.2 bits (151), Expect = 2e-10
Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 636 ADGPLPSVLQEVSVPVINNSLCETMYRAA--GFIEHIPEIFICAGWRKGSFDSC 687
+ ++L+++ +P ++ C+ R G + + F+CAG +G D+C
Sbjct: 276 SRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGEQGK-DTC 328
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic
resolution, hydrolase/hydrolase inhibitor complex; 1.20A
{Pontastacus leptodactylus} SCOP: b.47.1.2
Length = 237
Score = 178 bits (453), Expect = 1e-51
Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED---VPPSDLLL 447
IVGG AT G++P+Q+S ++ H CGA+++NEN+A+TA HCV PS L +
Sbjct: 1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQI 60
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP 507
GE D+S E Q V + H FD + D++LL+ + F N+ PI +P
Sbjct: 61 VAGELDMSVNEGS--EQIITVSKIILHENFDYNLLDNDISLLKLSGSLTFNDNVAPIALP 118
Query: 508 EDDTNFVGTSAHVTGWGRLYEG 529
E VTGWG EG
Sbjct: 119 EQGHTA-TGDVIVTGWGTTSEG 139
Score = 84.6 bits (210), Expect = 2e-18
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
IVGG AT G++P+Q+S ++ H CGA+++NEN+A+TA HCV
Sbjct: 1 IVGGTDATLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYG 49
Score = 64.5 bits (158), Expect = 9e-12
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
G P VLQ+V+VP++++ C Y A I + ICAG +G DSC
Sbjct: 139 GGNTPDVLQKVTVPLVSDEDCRADYGADE----ILDSMICAGVPEGGKDSC 185
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease
(elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Length = 241
Score = 175 bits (446), Expect = 1e-50
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
++GG A+ G++PWQ+S Q ++ H CGA+L + A++A+HCV+ V P+++ + G
Sbjct: 1 VIGGTNASPGEFPWQLSQ-QRQSGSWSHSCGASLLSSTSALSASHCVDGVLPNNIRVIAG 59
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRT--FEYDLALLRFYEPVKFQPNIIPICVPE 508
S G Q V H + T + D+A+L + NI +P
Sbjct: 60 LWQQSDTS---GTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPA 116
Query: 509 DDTNF-VGTSAHVTGWGRLYEG 529
++ N GT+ ++GWGR
Sbjct: 117 NNNNDYAGTTCVISGWGRTDGT 138
Score = 82.7 bits (205), Expect = 7e-18
Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
++GG A+ G++PWQ+S Q ++ H CGA+L + A++A+HCV+
Sbjct: 1 VIGGTNASPGEFPWQLSQ-QRQSGSWSHSCGASLLSSTSALSASHCVDG 48
Score = 63.8 bits (156), Expect = 2e-11
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
LP +LQ+ S+PVI + C G I + IC G+ +C
Sbjct: 138 TNNLPDILQKSSIPVITTAQCTAAMVGVGGAN-IWDNHICVQDPAGNTGAC 187
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase;
1.90A {Homo sapiens} PDB: 1ekb_B
Length = 235
Score = 173 bits (442), Expect = 3e-50
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 8/142 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--VPPSDLLLR 448
IVGG A G WPW + L R CGA+L + +W V+AAHCV + PS
Sbjct: 1 IVGGSDAKEGAWPWVVGLYYDDR----LLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAI 56
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
LG H S P R + + +P ++ R + D+A++ V + I PI +PE
Sbjct: 57 LGLHMKSNLTSPQT-VPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPE 115
Query: 509 DDTNF-VGTSAHVTGWGRLYEG 529
++ F G + + GWG +
Sbjct: 116 ENQVFPPGRNCSIAGWGTVVYQ 137
Score = 78.8 bits (195), Expect = 1e-16
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
IVGG A G WPW + L R CGA+L + +W V+AAHCV
Sbjct: 1 IVGGSDAKEGAWPWVVGLYYDDR----LLCGASLVSSDWLVSAAHCVYG 45
Score = 63.8 bits (156), Expect = 1e-11
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
G +LQE VP+++N C+ I E ICAG+ +G DSC
Sbjct: 137 QGTTADILQEADVPLLSNERCQQQMPEYN----ITENMICAGYEEGGIDSC 183
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase,
innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila
melanogaster}
Length = 408
Score = 179 bits (455), Expect = 4e-50
Identities = 50/167 (29%), Positives = 71/167 (42%), Gaps = 16/167 (9%)
Query: 379 EVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 438
CG S R+ G + PW LR CG A+ +E + +TAAHCV
Sbjct: 109 FDCGNF--LSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVH 166
Query: 439 DVPPSDLLLRLGEHDLSTEEEPY----------GYQERRVQIVASHPQFDPRTFEYDLAL 488
+ +RLGEH +STEE+ ++ H ++D R +D+AL
Sbjct: 167 GLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIAL 226
Query: 489 LRFYEPVKFQPNIIPICVPEDDT----NFVGTSAHVTGWGRLYEGRF 531
L+ V FQ +I PIC+P D ++ VTGWG G
Sbjct: 227 LKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSS 273
Score = 78.4 bits (193), Expect = 1e-15
Identities = 30/133 (22%), Positives = 44/133 (33%), Gaps = 13/133 (9%)
Query: 490 RFYEPVKFQPNIIPICVPEDDTNFV-----GTSAHVTGWGRLYEGRFRRSYGHPATRQEM 544
R E + VP D +++ G V + S + E
Sbjct: 49 RTIEERLTEAQKAGQKVPADYASYLQKALCGEFNGVRHFCCPSANIQHNSKVMSLFKDEN 108
Query: 545 ATCWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVT 604
C GN S R+ G + PW LR CG A+ +E + +T
Sbjct: 109 FDC-----GNF---LSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILT 160
Query: 605 AAHCVEDLWSQII 617
AAHCV L + +
Sbjct: 161 AAHCVHGLQNDLY 173
Score = 56.4 bits (136), Expect = 1e-08
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 6/51 (11%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+G VL + +VP+ S C YR A +P +C G DSC
Sbjct: 270 NGSSSDVLLQANVPLQPRSACSQAYRRA-----VPLSQLCVGGGDLQ-DSC 314
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor;
mutagenically deglycosyalted human plasma kallikrein
protease domain; HET: BAM; 1.40A {Homo sapiens} PDB:
2anw_A*
Length = 241
Score = 173 bits (442), Expect = 4e-50
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
IVGG ++++G+WPWQ+SL Q + H CG +L W +TAAHC + +P +
Sbjct: 1 IVGGTESSWGEWPWQVSL-QVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYS 59
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
G +LS + +++ + H + +D+AL++ P+++ PI +P
Sbjct: 60 GILELSDITKDT--PFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSK 117
Query: 510 DTNF-VGTSAHVTGWGRLYEG 529
+ T+ VTGWG E
Sbjct: 118 GDTSTIYTNCWVTGWGFSKEK 138
Score = 83.0 bits (206), Expect = 6e-18
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
IVGG ++++G+WPWQ+SL Q + H CG +L W +TAAHC +
Sbjct: 1 IVGGTESSWGEWPWQVSL-QVKLTAQRHLCGGSLIGHQWVLTAAHCFDG 48
Score = 63.4 bits (155), Expect = 2e-11
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
G + ++LQ+V++P++ N C+ Y+ I + +CAG+++G D+C
Sbjct: 138 KGEIQNILQKVNIPLVTNEECQKRYQDY----KITQRMVCAGYKEGGKDAC 184
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor
complex, serine proteinase, benzamidine phosphonate,
serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens}
PDB: 3bn9_B* 3nps_A 1eax_A 1eaw_A 2gv6_A* 2gv7_A*
3p8g_A* 3p8f_A*
Length = 241
Score = 173 bits (442), Expect = 5e-50
Identities = 59/146 (40%), Positives = 79/146 (54%), Gaps = 11/146 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP------PSD 444
+VGG A G+WPWQ+SL H CGA+L + NW V+AAHC D P+
Sbjct: 1 VVGGTDADEGEWPWQVSLHAL---GQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQ 57
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPI 504
LG HD S P G QERR++ + SHP F+ TF+YD+ALL +P ++ + PI
Sbjct: 58 WTAFLGLHDQSQRSAP-GVQERRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPI 116
Query: 505 CVPEDDTNF-VGTSAHVTGWGRLYEG 529
+P+ F G + VTGWG G
Sbjct: 117 SLPDASHVFPAGKAIWVTGWGHTQYG 142
Score = 81.1 bits (201), Expect = 2e-17
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
+VGG A G+WPWQ+SL H CGA+L + NW V+AAHC D
Sbjct: 1 VVGGTDADEGEWPWQVSLHAL---GQGHICGASLISPNWLVSAAHCYID 46
Score = 62.2 bits (152), Expect = 5e-11
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
G +LQ+ + VIN + CE + I +C G+ G DSC
Sbjct: 142 GGTGALILQKGEIRVINQTTCENLLPQQ-----ITPRMMCVGFLSGGVDSC 187
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen,
secreted, protease, hydrolase, polymorphism,
glycoprotein, gamma-carboxyglutamic acid; HET: BI7;
1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A*
2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D
2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B*
1lqd_B* 1nfu_A* 1nfw_A* ...
Length = 241
Score = 172 bits (437), Expect = 3e-49
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 11/143 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IVGG++ G+ PWQ L CG + +E + +TAAHC+ +R+G
Sbjct: 1 IVGGQECKDGECPWQALLINE---ENEGFCGGTILSEFYILTAAHCLYQ--AKRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
+ + EE V++V H +F T+++D+A+LR P+ F+ N+ P C+PE D
Sbjct: 56 DRNTEQEEGGE--AVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERD 113
Query: 511 ----TNFVGTSAHVTGWGRLYEG 529
T + V+G+GR +E
Sbjct: 114 WAESTLMTQKTGIVSGFGRTHEK 136
Score = 78.0 bits (193), Expect = 3e-16
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
IVGG++ G+ PWQ L CG + +E + +TAAHC+
Sbjct: 1 IVGGQECKDGECPWQALLINE---ENEGFCGGTILSEFYILTAAHCLYQ 46
Score = 60.7 bits (148), Expect = 2e-10
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
G + L+ + VP ++ + C+ I + CAG+ D+C+
Sbjct: 136 KGEQSTRLKMLEVPYVDRNSCKLSSSFI-----ITQNMFCAGYDTKQEDACQ 182
>2bdy_A Thrombin; thrombin, complex structure, hydrolase,
hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo
sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E*
1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A*
1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A*
1zgi_A* 1zgv_A* 1zrb_A* ...
Length = 289
Score = 173 bits (440), Expect = 3e-49
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 373 NMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVT 432
++ + E + RIV G A G PWQ+ L + +S CGA+L ++ W +T
Sbjct: 13 SLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVML--FRKSPQELLCGASLISDRWVLT 70
Query: 433 AAHCVEDVP------PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYD 485
AAHC+ P +DLL+R+G+H + E + ++ + HP+++ R + D
Sbjct: 71 AAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNI-EKISMLEKIYIHPRYNWRENLDRD 129
Query: 486 LALLRFYEPVKFQPNIIPICVPEDDTNF----VGTSAHVTGWGRLYEGRFRRSYG-HPAT 540
+AL++ +PV F I P+C+P+ +T G VTGWG L E P+
Sbjct: 130 IALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSV 189
Query: 541 RQE 543
Q
Sbjct: 190 LQV 192
Score = 84.7 bits (210), Expect = 3e-18
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
+ RIV G A G PWQ+ L + +S CGA+L ++ W +TAAHC+
Sbjct: 26 YIDGRIVEGSDAEIGMSPWQVML--FRKSPQELLCGASLISDRWVLTAAHCLLY 77
Score = 57.8 bits (140), Expect = 3e-09
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRK---GSFDSCE 688
PSVLQ V++P++ +C+ R I + CAG++ D+CE
Sbjct: 184 KGQPSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDACE 232
>1md8_A C1R complement serine protease; innate immunity, activation,
substrate specificity, hydrolase; 2.80A {Homo sapiens}
SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Length = 329
Score = 174 bits (443), Expect = 3e-49
Identities = 60/240 (25%), Positives = 100/240 (41%), Gaps = 28/240 (11%)
Query: 302 PPPQQNVTTTVVTTKPYPETTTTTEKTEPSPSTVYETSSMSPSSPKPSPTTSTVSTTAFI 361
P N TT + P +T + S S + T +
Sbjct: 5 PRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIW--- 61
Query: 362 DESNEIESQGINMSNYKEVCGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLH 418
+ E +G + VCG+ + P RI+GG+KA G +PWQ+
Sbjct: 62 ----KNEQKGEKIPRCLPVCGKPVNPVEQRQRIIGGQKAKMGNFPWQVFTNIH------G 111
Query: 419 KCGAALFNENWAVTAAHCV-----EDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVAS 473
+ G AL + W +TAAH + E + L + LG ++ + ++ V+
Sbjct: 112 RGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKL---GNHPIRRVSV 168
Query: 474 HPQF---DPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
HP + + FE D+ALL V PN++PIC+P++DT + +G +V+G+G + E
Sbjct: 169 HPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEK 228
Score = 84.4 bits (209), Expect = 8e-18
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIP 618
RI+GG+KA G +PWQ+ + G AL + W +TAAH + +
Sbjct: 86 QRQRIIGGQKAKMGNFPWQVFTNIH------GRGGGALLGDRWILTAAHTLYPKEHEAQS 139
Score = 67.1 bits (164), Expect = 3e-12
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
+ + L+ V +PV N CE R ++ + CAG D+C+
Sbjct: 226 EEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQ 277
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 174 bits (444), Expect = 1e-48
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 340 SMSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYKEVCGRRLFP---SSRIVGGEK 396
M + + TA NE +G + VCG+ + P +I+GG+K
Sbjct: 106 KMQTRAGSRESEQGVYTCTAQGIWKNE--QKGEKIPRCLPVCGKPVNPVEQRQQIIGGQK 163
Query: 397 ATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV-----EDVPPSDLLLRLGE 451
A G +PWQ+ + G AL + W +TAAH + E + L + LG
Sbjct: 164 AKMGNFPWQVFTNIH------GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGH 217
Query: 452 HDLSTEEEPYGYQERRVQIVASHPQF---DPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
++ + ++ V+ HP + + FE D+ALL V PN++PIC+P+
Sbjct: 218 TNVEELMKL---GNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPD 274
Query: 509 DDTNF-VGTSAHVTGWGRLYEG 529
+DT + +G +V+G+G + E
Sbjct: 275 NDTFYDLGLMGYVSGFGVMEEK 296
Score = 83.3 bits (206), Expect = 3e-17
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 6/57 (10%)
Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQ 615
+I+GG+KA G +PWQ+ + G AL + W +TAAH + +
Sbjct: 154 QRQQIIGGQKAKMGNFPWQVFTNIH------GRGGGALLGDRWILTAAHTLYPKEHE 204
Score = 66.4 bits (162), Expect = 9e-12
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
+ L+ V +PV N CE R ++ + CAG D+C+
Sbjct: 295 EKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQ 345
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG;
2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Length = 625
Score = 179 bits (456), Expect = 2e-48
Identities = 54/197 (27%), Positives = 79/197 (40%), Gaps = 8/197 (4%)
Query: 336 YETSSMSPSSPKPS-PTTSTVSTTAFIDESNEIESQGINMSNYKEVCGRRLFPSSRIVGG 394
+S + K +S S T + I + + C + RIVGG
Sbjct: 334 PAQASCNEGKGKCYLKLSSNGSPTKILHGRGGISGYTLRLCKMDNECTTK--IKPRIVGG 391
Query: 395 EKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRLGEHD 453
+ G+WPWQ++L T H CG ++ W +TAAHC V P L + G +
Sbjct: 392 TASVRGEWPWQVTL-HTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILN 450
Query: 454 LSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF 513
S +E VQ + H Q+ YD+ALL+ V + + PIC+P
Sbjct: 451 QSEIKEDT--SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRN 508
Query: 514 -VGTSAHVTGWGRLYEG 529
+ T VTGWG
Sbjct: 509 VIYTDCWVTGWGYRKLR 525
Score = 88.8 bits (220), Expect = 2e-18
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 547 CWNHFLGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAA 606
++ + RIVGG + G+WPWQ++L T H CG ++ W +TAA
Sbjct: 375 KMDNECTTK---IKPRIVGGTASVRGEWPWQVTL-HTTSPTQRHLCGGSIIGNQWILTAA 430
Query: 607 HCVEDLWS 614
HC + S
Sbjct: 431 HCFYGVES 438
Score = 62.2 bits (151), Expect = 4e-10
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+ + LQ+ +P++ N C+ YR I ICAG+R+G D+C
Sbjct: 525 RDKIQNTLQKAKIPLVTNEECQKRYRG----HKITHKMICAGYREGGKDAC 571
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating
factor-I, PPAF-I, serine proteas hydrolase; HET: NAG;
1.70A {Holotrichia diomphalia}
Length = 278
Score = 170 bits (433), Expect = 2e-48
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 18/169 (10%)
Query: 379 EVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYL-HKCGAALFNENWAVTAAHCV 437
CG ++ + +I+ G+ ++PW + S + CG +L N + VTAAHCV
Sbjct: 12 NDCGYQV-EADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCV 70
Query: 438 EDVPPSDLLL----RLGEHDLSTEEEPYG---------YQERRVQIVASHPQFDPRTFE- 483
+ RLGE + +T+ + YG + ++ HP + + +
Sbjct: 71 AGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDR 130
Query: 484 -YDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEGR 530
+D+AL+R V+F I P+C+P+ + VG V GWGR G+
Sbjct: 131 YHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQ 179
Score = 79.3 bits (196), Expect = 2e-16
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYL-HKCGAALFNENWAVTAAHCVEDLWSQII 617
+ +I+ G+ ++PW + S + CG +L N + VTAAHCV +++
Sbjct: 19 EADKILNGDDTVPEEFPWTAMIGYKNSSNFEQFACGGSLINNRYIVTAAHCVAGRVLRVV 78
Query: 618 PIIQNCRRRESNL 630
+ R E N
Sbjct: 79 GALNKVRLGEWNT 91
Score = 61.9 bits (151), Expect = 1e-10
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
G ++ Q+++VPV++ C + AAG + +CAG K DSC
Sbjct: 174 RTETGQYSTIKQKLAVPVVHAEQCAKTFGAAGV--RVRSSQLCAGGEKAK-DSC 224
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex,
hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2
PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H
1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H*
1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H*
...
Length = 254
Score = 169 bits (431), Expect = 2e-48
Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
IVGG+ G+ PWQ+ L CG L N W V+AAHC + + +L+ L
Sbjct: 1 IVGGKVCPKGECPWQVLLLVNGA----QLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVL 56
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE- 508
GEHDLS + Q RRV V + P T +D+ALLR ++PV +++P+C+PE
Sbjct: 57 GEHDLSEHDGDE--QSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLTDHVVPLCLPER 114
Query: 509 ---DDTNFVGTSAHVTGWGRLYEG 529
+ T + V+GWG+L +
Sbjct: 115 TFSERTLAFVRFSLVSGWGQLLDR 138
Score = 77.7 bits (192), Expect = 5e-16
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS 614
IVGG+ G+ PWQ+ L CG L N W V+AAHC + + +
Sbjct: 1 IVGGKVCPKGECPWQVLLLVNGA----QLCGGTLINTIWVVSAAHCFDKIKN 48
Score = 70.0 bits (172), Expect = 2e-13
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
G L ++VP + C R G +I E CAG+ GS DSC
Sbjct: 138 RGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDGSKDSC 188
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation,
hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC;
1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A*
2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A*
3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Length = 245
Score = 168 bits (427), Expect = 6e-48
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 9/142 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--VPPSDLLLR 448
IVGG++A KWPWQ+SL + ++H CG +L + W +TAAHCV + L ++
Sbjct: 1 IVGGQEAPRSKWPWQVSL-RVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQ 59
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
L E L ++ Q V + HPQF D+ALL EPV + + +P
Sbjct: 60 LREQHLYYQD-----QLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPP 114
Query: 509 DDTNF-VGTSAHVTGWGRLYEG 529
F G VTGWG +
Sbjct: 115 ASETFPPGMPCWVTGWGDVDND 136
Score = 83.5 bits (207), Expect = 4e-18
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
IVGG++A KWPWQ+SL + ++H CG +L + W +TAAHCV
Sbjct: 1 IVGGQEAPRSKWPWQVSL-RVRDRYWMHFCGGSLIHPQWVLTAAHCVGP 48
Score = 53.0 bits (128), Expect = 7e-08
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Query: 637 DGPLPS--VLQEVSVPVINNSLCETMYRAAGFIEH----IPEIFICAGWRKGSFDSC 687
D PLP L++V VP++ N +C+ Y + I + +CAG DSC
Sbjct: 136 DEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAG--NSQRDSC 190
>1z8g_A Serine protease hepsin; serine protease hepsin, protease,
hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A
{Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A
1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Length = 372
Score = 172 bits (437), Expect = 7e-48
Identities = 51/170 (30%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 369 SQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNEN 428
+G ++ + CGRR P RIVGG + G+WPWQ+SLR H CG +L + +
Sbjct: 96 PRGRFLAAICQDCGRRKLPVDRIVGGRDTSLGRWPWQVSLRYDGA----HLCGGSLLSGD 151
Query: 429 WAVTAAHCVED--VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDP------R 480
W +TAAHC + S + G ++ + VQ V H + P
Sbjct: 152 WVLTAAHCFPERNRVLSRWRVFAGAVAQASPHG----LQLGVQAVVYHGGYLPFRDPNSE 207
Query: 481 TFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFV-GTSAHVTGWGRLYEG 529
D+AL+ P+ I P+C+P V G VTGWG
Sbjct: 208 ENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYY 257
Score = 82.5 bits (204), Expect = 5e-17
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
P RIVGG + G+WPWQ+SLR H CG +L + +W +TAAHC +
Sbjct: 113 LPVDRIVGGRDTSLGRWPWQVSLRYDGA----HLCGGSLLSGDWVLTAAHCFPE 162
Score = 60.5 bits (147), Expect = 6e-10
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
G VLQE VP+I+N +C I CAG+ +G D+C
Sbjct: 257 YGQQAGVLQEARVPIISNDVCNGADFYGN---QIKPKMFCAGYPEGGIDAC 304
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA
inhibitor complex, covalent inhibitor, alternative
splicing, blood coagulation; HET: INH; 1.60A {Homo
sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A*
1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A*
1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A*
2fda_A* ...
Length = 238
Score = 166 bits (424), Expect = 1e-47
Identities = 45/141 (31%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
IVGG + G+WPWQ++L T H CG ++ W +TAAHC V P L +
Sbjct: 1 IVGGTASVRGEWPWQVTL-HTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYS 59
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
G + S +E VQ + H Q+ YD+ALL+ V + + PI +P
Sbjct: 60 GILNQSEIKEDT--SFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSK 117
Query: 510 DTNF-VGTSAHVTGWGRLYEG 529
+ T VTGWG
Sbjct: 118 GERNVIYTDCWVTGWGYRKLR 138
Score = 80.7 bits (200), Expect = 3e-17
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS 614
IVGG + G+WPWQ++L T H CG ++ W +TAAHC + S
Sbjct: 1 IVGGTASVRGEWPWQVTL-HTTSPTQRHLCGGSIIGNQWILTAAHCFYGVES 51
Score = 60.3 bits (147), Expect = 2e-10
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+ + LQ+ +P++ N C+ YR I ICAG+R+G D+C
Sbjct: 138 RDKIQNTLQKAKIPLVTNEECQKRYRGH----KITHKMICAGYREGGKDAC 184
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase,
hydroxy immune response, innate immunity, sushi,
coagulation, compl pathway; 2.55A {Homo sapiens} PDB:
4djz_B
Length = 251
Score = 166 bits (422), Expect = 3e-47
Identities = 50/155 (32%), Positives = 67/155 (43%), Gaps = 20/155 (12%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED----------- 439
I G A G PW L CG +L +W VTAAHC+
Sbjct: 1 IFNGRPAQKGTTPWIAMLSHL---NGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRD 57
Query: 440 ---VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVK 496
+ PSD + LG+H +E Q V+ HPQ+DP TFE D+AL+ E
Sbjct: 58 SDLLSPSDFKIILGKHWRLRSDENE--QHLGVKHTTLHPQYDPNTFENDVALVELLESPV 115
Query: 497 FQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRF 531
++PIC+PE G V+GWG+ + RF
Sbjct: 116 LNAFVMPICLPEGPQQ-EGAMVIVSGWGKQFLQRF 149
Score = 79.6 bits (197), Expect = 7e-17
Identities = 19/70 (27%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIPIIQN 622
I G A G PW L CG +L +W VTAAHC+ P +++
Sbjct: 1 IFNGRPAQKGTTPWIAMLSHL---NGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRD 57
Query: 623 CRRRESNLWK 632
+ +K
Sbjct: 58 SDLLSPSDFK 67
Score = 63.9 bits (156), Expect = 2e-11
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
P L E+ +P++++S C+ Y + ICAG ++G D+C
Sbjct: 143 KQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKKK--VTRDMICAGEKEGGKDACA 195
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood
coagulation, BLOO clotting, convertion of fibrinogen to
fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB:
1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H*
1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H*
1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Length = 259
Score = 166 bits (423), Expect = 4e-47
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP------PSD 444
IV G A G PWQ+ L + +S CGA+L ++ W +TAAHC+ P +D
Sbjct: 1 IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTEND 58
Query: 445 LLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFYEPVKFQPNIIP 503
LL+R+G+H + E + ++ + HP+++ R + D+AL++ +PV F I P
Sbjct: 59 LLVRIGKHSRTRYERNI-EKISMLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHP 117
Query: 504 ICVPEDDTNFV----GTSAHVTGWGRLYEGRFRRSYG-HPATRQE 543
+C+P+ +T G VTGWG L E P+ Q
Sbjct: 118 VCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQV 162
Score = 79.7 bits (197), Expect = 1e-16
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
IV G A G PWQ+ L + +S CGA+L ++ W +TAAHC+
Sbjct: 1 IVEGSDAEIGMSPWQVMLFR--KSPQELLCGASLISDRWVLTAAHCLLY 47
Score = 58.1 bits (141), Expect = 2e-09
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRK---GSFDSCE 688
PSVLQ V++P++ +C+ R I + CAG++ D+CE
Sbjct: 154 KGQPSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDACE 202
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI,
protein-protein interaction, non-cognate binding, S1
pocket, primary specificity; 1.70A {Bos taurus} SCOP:
b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E
1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A
1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Length = 245
Score = 165 bits (421), Expect = 5e-47
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 381 CGRRLFP-----SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAH 435
CG SRIV GE+A G WPWQ+SL+ T H CG +L NENW VTAAH
Sbjct: 1 CGVPAIQPVLSGLSRIVNGEEAVPGSWPWQVSLQ---DKTGFHFCGGSLINENWVVTAAH 57
Query: 436 CVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV 495
C + ++ GE D + E Q+ ++ V + +++ T D+ LL+
Sbjct: 58 CGV---TTSDVVVAGEFDQGSSSEKI--QKLKIAKVFKNSKYNSLTINNDITLLKLSTAA 112
Query: 496 KFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
F + +C+P +F GT+ TGWG
Sbjct: 113 SFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYT 147
Score = 83.8 bits (208), Expect = 3e-18
Identities = 29/53 (54%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
SRIV GE+A G WPWQ+SL+ T H CG +L NENW VTAAHC
Sbjct: 12 GLSRIVNGEEAVPGSWPWQVSLQ---DKTGFHFCGGSLINENWVVTAAHCGVT 61
Score = 53.4 bits (129), Expect = 6e-08
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+ P LQ+ S+P+++N+ C+ + I + ICAG SC
Sbjct: 148 NANTPDRLQQASLPLLSNTNCKKYWGTK-----IKDAMICAG--ASGVSSC 191
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular
protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2
g.18.1.1 g.18.1.1 PDB: 1q3x_A
Length = 403
Score = 169 bits (431), Expect = 8e-47
Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 17/159 (10%)
Query: 380 VCGRRLFP-SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 438
VCG +I GG+KA G +PWQ+ + AL +NW +TAAH V
Sbjct: 150 VCGLSARTTGGQIYGGQKAKPGDFPWQVLILGG------TTAAGALLYDNWVLTAAHAVY 203
Query: 439 D--VPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRT-FEYDLALLRFYEPV 495
+ S L +R+G + + + V H + F+ D+AL++ V
Sbjct: 204 EQKHDASALDIRMGTLKRLSPHY----TQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKV 259
Query: 496 KFQPNIIPICVPEDDTNFV---GTSAHVTGWGRLYEGRF 531
NI PIC+P + +GWG G
Sbjct: 260 VINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFL 298
Score = 82.1 bits (203), Expect = 8e-17
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 553 GNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
G +I GG+KA G +PWQ+ + AL +NW +TAAH V +
Sbjct: 152 GLSARTTGGQIYGGQKAKPGDFPWQVLILGG------TTAAGALLYDNWVLTAAHAVYE 204
Score = 62.9 bits (153), Expect = 1e-10
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 635 LADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEH-IPEIFICAGWRKGSFDSCE 688
G L L V +P++++ C Y + + +CAG G DSC
Sbjct: 293 TQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSCR 347
>1aut_C Activated protein C; serine proteinase, plasma calcium binding,
glycoprotein, HYD hydrolase inhibitor complex, blood
clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2
PDB: 3f6u_H*
Length = 250
Score = 165 bits (419), Expect = 8e-47
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 20/178 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
++ G+ G PWQ+ L S CGA L + +W +TAAHC+++ LL+RLG
Sbjct: 1 LIDGKMTRRGDSPWQVVLL---DSKKKLACGAVLIHPSWVLTAAHCMDE--SKKLLVRLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE-- 508
E+DL E+ + ++ V HP + T + D+ALL +P I+PIC+P+
Sbjct: 56 EYDLRRWEKWE--LDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQTIVPICLPDSG 113
Query: 509 ---DDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQE-------MATCWNHFLGNRI 556
+ N G VTGWG C + + N +
Sbjct: 114 LAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNEC-SEVMSNMV 170
Score = 75.8 bits (187), Expect = 2e-15
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
++ G+ G PWQ+ L S CGA L + +W +TAAHC+++
Sbjct: 1 LIDGKMTRRGDSPWQVVLL---DSKKKLACGAVLIHPSWVLTAAHCMDE 46
Score = 54.2 bits (131), Expect = 4e-08
Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 5/53 (9%)
Query: 636 ADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
A VL + +PV+ ++ C + + E +CAG D+CE
Sbjct: 141 AKRNRTFVLNFIKIPVVPHNECSEVMSNM-----VSENMLCAGILGDRQDACE 188
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel,
complement pathway like domain, glycoprotein, hydrolase,
hydroxylation, immune response; 2.60A {Homo sapiens}
SCOP: b.47.1.2
Length = 242
Score = 163 bits (414), Expect = 4e-46
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED-----VPPSDL 445
I+GG+KA G +PWQ+ + G AL + W +TAAH + + L
Sbjct: 1 IIGGQKAKMGNFPWQVFTNIH------GRGGGALLGDRWILTAAHTLYPKEHEAQSNASL 54
Query: 446 LLRLGEHDLSTEEEPYGYQERRVQIVASHPQF---DPRTFEYDLALLRFYEPVKFQPNII 502
+ LG ++ + ++ V+ HP + + FE D+ALL V PN++
Sbjct: 55 DVFLGHTNVEELMKL---GNHPIRRVSVHPDYRQDESYNFEGDIALLELENSVTLGPNLL 111
Query: 503 PICVPEDDTNF-VGTSAHVTGWGRLYEG 529
PIC+P++DT + +G +V+G+G + E
Sbjct: 112 PICLPDNDTFYDLGLMGYVSGFGVMEEK 139
Score = 79.6 bits (197), Expect = 8e-17
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIP 618
I+GG+KA G +PWQ+ + G AL + W +TAAH + +
Sbjct: 1 IIGGQKAKMGNFPWQVFTNIH------GRGGGALLGDRWILTAAHTLYPKEHEAQS 50
Score = 68.1 bits (167), Expect = 7e-13
Identities = 13/52 (25%), Positives = 22/52 (42%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
+ + L+ V +PV N CE R ++ + CAG D+C+
Sbjct: 137 EEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHPSLKQDACQ 188
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine
proteinases, trypsin-like serine protease, tumor marker,
hydrolase; 1.61A {Homo sapiens}
Length = 232
Score = 161 bits (411), Expect = 7e-46
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 12/141 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
IVGG + G+WPWQ SL+ H+CGA L N W V+AAHC P+
Sbjct: 1 IVGGTEVEEGEWPWQASLQWDGS----HRCGATLINATWLVSAAHCFTTYKNPARWTASF 56
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
G ++ +R ++ + H ++ + +YD++L PV + + +C+P+
Sbjct: 57 GVTIKPSK------MKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDA 110
Query: 510 DTNF-VGTSAHVTGWGRLYEG 529
F G VTG+G L
Sbjct: 111 SYEFQPGDVMFVTGFGALKND 131
Score = 76.8 bits (190), Expect = 6e-16
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
IVGG + G+WPWQ SL+ H+CGA L N W V+AAHC
Sbjct: 1 IVGGTEVEEGEWPWQASLQWDGS----HRCGATLINATWLVSAAHCFTT 45
Score = 61.8 bits (151), Expect = 7e-11
Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
DG + L++ V +I+ + C I +CAG +G D+C
Sbjct: 131 DGYSQNHLRQAQVTLIDATTCNEPQAYND---AITPRMLCAGSLEGKTDAC 178
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine
protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Length = 424
Score = 167 bits (425), Expect = 9e-46
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 373 NMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVT 432
++ + E + RIV G A G PWQ+ L + +S CGA+L ++ W +T
Sbjct: 148 SLEDKTERELLESYIDGRIVEGSDAEIGMSPWQVML--FRKSPQELLCGASLISDRWVLT 205
Query: 433 AAHCVEDVP------PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPR-TFEYD 485
AAHC+ P +DLL+R+G+H + E + ++ + HP+++ R + D
Sbjct: 206 AAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNI-EKISMLEKIYIHPRYNWRENLDRD 264
Query: 486 LALLRFYEPVKFQPNIIPICVPEDDTNF----VGTSAHVTGWGRLYEGRFRRSYGHPAT 540
+AL++ +PV F I P+C+P+ +T G VTGWG L E +
Sbjct: 265 IALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPS 323
Score = 81.4 bits (201), Expect = 1e-16
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
+ RIV G A G PWQ+ L + +S CGA+L ++ W +TAAHC+
Sbjct: 161 YIDGRIVEGSDAEIGMSPWQVML--FRKSPQELLCGASLISDRWVLTAAHCLLY 212
Score = 55.6 bits (134), Expect = 3e-08
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRK---GSFDSCE 688
PSVLQ V++P++ +C+ R I + CAG++ D+CE
Sbjct: 319 KGQPSVLQVVNLPIVERPVCKDSTR-----IRITDNMFCAGYKPDEGKRGDACE 367
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro
evolution, specific inhibitor, allostery, hydrolase;
1.28A {Homo sapiens}
Length = 242
Score = 161 bits (409), Expect = 2e-45
Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 16/147 (10%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--VPPSDLLLR 448
I GG+KA G +PWQ+ + AL +NW +TAAH V + S L +R
Sbjct: 1 IYGGQKAKPGDFPWQVLILGG------TTAAGALLYDNWVLTAAHAVYEQKHDASALDIR 54
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRT-FEYDLALLRFYEPVKFQPNIIPICVP 507
+G + + + V H + F+ D+AL++ V NI PIC+P
Sbjct: 55 MGTLKRLSPHY----TQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVINSNITPICLP 110
Query: 508 EDDTNFV---GTSAHVTGWGRLYEGRF 531
+ +GWG G
Sbjct: 111 RKEAESFMRTDDIGTASGWGLTQRGFL 137
Score = 77.3 bits (191), Expect = 5e-16
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
I GG+KA G +PWQ+ + AL +NW +TAAH V +
Sbjct: 1 IYGGQKAKPGDFPWQVLILGG------TTAAGALLYDNWVLTAAHAVYE 43
Score = 66.1 bits (162), Expect = 3e-12
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEH-IPEIFICAGWRKGSFDSC 687
G L L V +P++++ C Y + + +CAG G DSC
Sbjct: 131 LTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGGKDSC 185
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen;
HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A
3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Length = 224
Score = 160 bits (406), Expect = 3e-45
Identities = 37/140 (26%), Positives = 58/140 (41%), Gaps = 18/140 (12%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
+VGG +A G++P+ + L CG AL+ ++ +TAAHCV + +
Sbjct: 1 VVGGTRAAQGEFPFMVRLS--------MGCGGALYAQDIVLTAAHCVSGSGNNTSITATG 52
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
G DL + + R V P F T+ D AL++ +P+ P
Sbjct: 53 GVVDLQSSSA----VKVRSTKVLQAPGFTKETYGKDWALIKLAQPINQ-----PTLKIAT 103
Query: 510 DTNFVGTSAHVTGWGRLYEG 529
T + + V GWG EG
Sbjct: 104 TTAYNQGTFTVAGWGANREG 123
Score = 76.8 bits (190), Expect = 4e-16
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 8/52 (15%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS 614
+VGG +A G++P+ + L CG AL+ ++ +TAAHCV +
Sbjct: 1 VVGGTRAAQGEFPFMVRLS--------MGCGGALYAQDIVLTAAHCVSGSGN 44
Score = 61.4 bits (150), Expect = 9e-11
Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
G L + +VP ++++ C + + ICAG+ D+C
Sbjct: 123 GGSQQRYLLKANVPFVSDAACRSSSSFIL----VANEMICAGYDTKQEDTC 169
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen,
hydrolase, glycoprotein, hydroxylation, phosphoprotein,
sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo
sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S
3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Length = 235
Score = 160 bits (407), Expect = 4e-45
Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
+VGGE A G++PWQ+ L CG ++ NE W VTAAHCVE + + G
Sbjct: 1 VVGGEDAKPGQFPWQVVLN----GKVDAFCGGSIVNEKWIVTAAHCVET--GVKITVVAG 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP--RTFEYDLALLRFYEPVKFQPNIIPICVPE 508
EH++ E Q+R V + H F+ T+ +D+ALL EP+ + PIC+ +
Sbjct: 55 EHNIEETEHT--EQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNSYVTPICIAD 112
Query: 509 DDTN---FVGTSAHVTGWGRLYEG 529
+ S +V+GWGR++
Sbjct: 113 KEYTNIFLKFGSGYVSGWGRVFHK 136
Score = 75.7 bits (187), Expect = 1e-15
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
+VGGE A G++PWQ+ L CG ++ NE W VTAAHCVE
Sbjct: 1 VVGGEDAKPGQFPWQVVLN----GKVDAFCGGSIVNEKWIVTAAHCVET 45
Score = 58.7 bits (143), Expect = 9e-10
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
G VLQ + VP+++ + C + I CAG+ +G DSC+
Sbjct: 136 KGRSALVLQYLRVPLVDRATCLRSTKFT-----ITNNMFCAGFHEGGRDSCQ 182
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR
sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo
sapiens} SCOP: b.47.1.2 g.18.1.1
Length = 333
Score = 163 bits (414), Expect = 4e-45
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 23/165 (13%)
Query: 380 VCGRRLFP---SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 436
VCG P RI+GG A +PWQ+ G AL NE W +TAAH
Sbjct: 69 VCGVPREPFEEKQRIIGGSDADIKNFPWQVFFDN-------PWAGGALINEYWVLTAAHV 121
Query: 437 VEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFD-------PRTFEYDLALL 489
VE + + +G + T + + V HP + F+ D+AL+
Sbjct: 122 VEG--NREPTMYVGSTSVQTSRLAKS-KMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALV 178
Query: 490 RFYEPVKFQPNIIPICVPEDDTNFV---GTSAHVTGWGRLYEGRF 531
R +PVK P + PIC+P +++ G ++GWGR +
Sbjct: 179 RLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDR 223
Score = 81.0 bits (200), Expect = 1e-16
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
RI+GG A +PWQ+ G AL NE W +TAAH VE
Sbjct: 79 EKQRIIGGSDADIKNFPWQVFFDN-------PWAGGALINEYWVLTAAHVVEG 124
Score = 53.6 bits (129), Expect = 9e-08
Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIF----ICAGWRKGSFDSC 687
L+ +PV C+ + + +F ICAG KG DSC
Sbjct: 217 RTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMICAGGEKGM-DSC 273
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen
activating factor, S protease, complement system; HET:
NAG; 2.69A {Homo sapiens}
Length = 565
Score = 168 bits (426), Expect = 7e-45
Identities = 49/233 (21%), Positives = 79/233 (33%), Gaps = 25/233 (10%)
Query: 341 MSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYKEVCGRRLF---PSSRIVGGEKA 397
+ T + + E + I K CG + RIVGG++A
Sbjct: 269 GEDEVGCAGFASVAQEETEILTADMDAERRRIKSLLPKLSCGVKNRMHIRRKRIVGGKRA 328
Query: 398 TFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTE 457
G PWQ++++ CG W +TAAHC+ + D
Sbjct: 329 QLGDLPWQVAIKDASG----ITCGGIYIGGCWILTAAHCLRASKTHRYQIWTTVVDWIHP 384
Query: 458 EEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF----QPNIIPICVPEDDTNF 513
+ V + H ++ T++ D+AL+ + P IP CVP F
Sbjct: 385 DLK-RIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLF 443
Query: 514 -VGTSAHVTGWGRLYEGRFRRSYGHPATRQE-----MATCWNHFLGNRILFPS 560
+ V+GWGR + + Q ++ C + F GNR
Sbjct: 444 QPNDTCIVSGWGREKDN------ERVFSLQWGEVKLISNC-SKFYGNRFYEKE 489
Score = 75.3 bits (185), Expect = 2e-14
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 552 LGNRILFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
+ NR+ RIVGG++A G PWQ++++ CG W +TAAHC+
Sbjct: 311 VKNRMHIRRKRIVGGKRAQLGDLPWQVAIKDASG----ITCGGIYIGGCWILTAAHCLRA 366
Score = 48.8 bits (116), Expect = 5e-06
Identities = 15/54 (27%), Positives = 19/54 (35%), Gaps = 6/54 (11%)
Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
D LQ V +I+N C Y + CAG GS D+C
Sbjct: 456 REKDNERVFSLQWGEVKLISN--CSKFYGNR----FYEKEMECAGTYDGSIDAC 503
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS;
1.70A {Solenopsis invicta} SCOP: b.47.1.2
Length = 222
Score = 158 bits (403), Expect = 9e-45
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV-PPSDLLLRL 449
IVGG+ A GK+P+Q+SLR + H+CGA++ + N +TAAHCV+ + + L + +
Sbjct: 1 IVGGKDAPVGKYPYQVSLR----LSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHV 56
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
G + LS V+ + +D D+AL+ P+KF + PI + +
Sbjct: 57 GTNYLSESG-----DVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTN 111
Query: 510 DTNFVGTSAHVTGWGRLYEG 529
D + +TGWG G
Sbjct: 112 DEDLESNPCTLTGWGSTRLG 131
Score = 76.4 bits (189), Expect = 6e-16
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL 612
IVGG+ A GK+P+Q+SLR + H+CGA++ + N +TAAHCV+ L
Sbjct: 1 IVGGKDAPVGKYPYQVSLR----LSGSHRCGASILDNNNVLTAAHCVDGL 46
Score = 49.1 bits (118), Expect = 1e-06
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 7/51 (13%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
G P+ LQE+ + V CE + + IC ++G +C
Sbjct: 131 GGNTPNALQEIELIVHPQKQCERDQWR------VIDSHICTLTKRGE-GAC 174
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase;
HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP:
b.47.1.2 PDB: 1fiz_A*
Length = 290
Score = 160 bits (406), Expect = 2e-44
Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 391 IVGGEKATFGKWPWQISLR--QWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLL 447
I+GG+ A G WPW +SL+ + + H CG +L N W +TAAHC +D L
Sbjct: 1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKVTDWRL 60
Query: 448 RLGEHDLSTEEE---PYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPI 504
G ++ QER V+ + H ++ + D+AL++ PV I P
Sbjct: 61 IFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITPPVTCGHFIGPG 120
Query: 505 CVPEDDTNFV--GTSAHVTGWGRLYEG 529
C+P+ + V GWG L E
Sbjct: 121 CLPQFRAGPPRVPQTCWVAGWGFLQEN 147
Score = 77.0 bits (190), Expect = 1e-15
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 563 IVGGEKATFGKWPWQISLR--QWIRSTYLHKCGAALFNENWAVTAAHCVED 611
I+GG+ A G WPW +SL+ + + H CG +L N W +TAAHC
Sbjct: 1 IIGGQDAAHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRI 51
Score = 56.2 bits (136), Expect = 9e-09
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 637 DGPLPS-VLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+ S +LQE V +I+ LC + G I +CAG+ +G D+C
Sbjct: 147 NARRTSPMLQEARVDLIDLGLCNSTRWYNG---RIRSTNVCAGYPEGKIDTC 195
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease;
1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Length = 240
Score = 158 bits (402), Expect = 2e-44
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 5/139 (3%)
Query: 394 GEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHD 453
GE A W WQ+SL+ + H CG +L +W VTA HC+ + LGE+D
Sbjct: 2 GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIST--SRTYQVVLGEYD 59
Query: 454 LSTEEEPYGYQERRVQIVASHPQFDPRTFE--YDLALLRFYEPVKFQPNIIPICVPEDDT 511
S E + HP ++ D+AL++ + + +P
Sbjct: 60 RSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQLGDKVQLANLPPAGD 119
Query: 512 NF-VGTSAHVTGWGRLYEG 529
+++GWGRLY G
Sbjct: 120 ILPNEAPCYISGWGRLYTG 138
Score = 76.5 bits (189), Expect = 8e-16
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 566 GEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
GE A W WQ+SL+ + H CG +L +W VTA HC+
Sbjct: 2 GEDAVPYSWSWQVSLQYEKDGAFHHTCGGSLIAPDWVVTAGHCIST 47
Score = 52.2 bits (126), Expect = 1e-07
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
GPLP LQ+ +P ++ C + + +CAG + C
Sbjct: 138 GGPLPDKLQQALLPTVDYEHCSQWDWWGIT---VKKTMVCAG--GDTRSGC 183
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes
scabiei type hominis}
Length = 228
Score = 155 bits (395), Expect = 1e-43
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Query: 393 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEH 452
GGEK + PW +++R + CG A+ ++ + +TAAHCV D P ++++
Sbjct: 2 GGEKTDIKQVPWTVAVRTYPGEES-LTCGGAILSQWFVLTAAHCVFDQKPETIVIQYEST 60
Query: 453 DLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF-QPNIIPICVPEDDT 511
+L + + + T E D+A+L P+K P +P+ +
Sbjct: 61 NLWEDPG----KSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLKSKPAKLPDIEF 116
Query: 512 NF-VGTSAHVTGWGRLYEG 529
G+ V+G+G
Sbjct: 117 RPKTGSDVLVSGYGDGQTM 135
Score = 71.9 bits (177), Expect = 2e-14
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 565 GGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL 612
GGEK + PW +++R + CG A+ ++ + +TAAHCV D
Sbjct: 2 GGEKTDIKQVPWTVAVRTYPGEES-LTCGGAILSQWFVLTAAHCVFDQ 48
Score = 52.2 bits (126), Expect = 1e-07
Identities = 9/51 (17%), Positives = 14/51 (27%), Gaps = 6/51 (11%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
P L+ + V++ C T Y + CA K
Sbjct: 135 MDPKDHDLKSAQLTVVDLDECRTKYGPIF----LSLQVFCAQ--KVGVSLE 179
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Length = 236
Score = 155 bits (395), Expect = 1e-43
Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
+VGG A WPWQISL+ S+Y H CG +L + W +TAAHCV+ + LG
Sbjct: 1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDS--ARTWRVVLG 58
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFE--YDLALLRFYEPVKFQPNIIPICVPE 508
EH+L+T E Q V V H ++ YD+ALLR + +P
Sbjct: 59 EHNLNTNEGK--EQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNSAVQLAALPP 116
Query: 509 DDTNF-VGTSAHVTGWGRLYEG 529
+ ++TGWG+ G
Sbjct: 117 SNQILPNNNPCYITGWGKTSTG 138
Score = 83.4 bits (207), Expect = 4e-18
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
+VGG A WPWQISL+ S+Y H CG +L + W +TAAHCV+
Sbjct: 1 VVGGRVAQPNSWPWQISLQYKSGSSYYHTCGGSLIRQGWVMTAAHCVDS 49
Score = 49.5 bits (119), Expect = 9e-07
Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
GPL L++ +P ++++ C + + +CAG G+ C
Sbjct: 138 GGPLSDSLKQAWLPSVDHATCSSSGWWGST---VKTTMVCAG--GGANSGC 183
>2jde_A Urokinase-type plasminogen activator; plasminogen activation,
EGF-like domain, blood coagulation, inhibitor complex,
UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Length = 276
Score = 156 bits (396), Expect = 4e-43
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 381 CGRRLF-PSSRIVGGEKATFGKWPWQISLR-QWIRSTYLHKCGAALFNENWAVTAAHCVE 438
CG++ P +I+GGE T PW ++ + + + CG +L + W ++A HC
Sbjct: 13 CGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFI 72
Query: 439 DVP-PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALLRFYEP- 494
D P D ++ LG L++ + + V+ + H + T + D+ALL+
Sbjct: 73 DYPKKEDYIVYLGRSRLNSNTQG--EMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 130
Query: 495 ---VKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
+ I IC+P + GTS +TG+G+
Sbjct: 131 GRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENST 169
Score = 83.9 bits (208), Expect = 4e-18
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 553 GNRILFPSSRIVGGEKATFGKWPWQISLR-QWIRSTYLHKCGAALFNENWAVTAAHCVED 611
G + L P +I+GGE T PW ++ + + + CG +L + W ++A HC D
Sbjct: 14 GQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFID 73
Score = 46.5 bits (111), Expect = 1e-05
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
D P L+ V +I++ C+ + + +CA + DSC
Sbjct: 170 DYLYPEQLKMTVVKLISHRECQQPHYYGS---EVTTKMLCAADPQWKTDSC 217
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease,
catalytic intermediate, atomic resolution,
hydrolase-hydrolase inhibitor complex; 0.94A {Sus
scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B*
1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A*
1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A*
1esa_A 1esb_A* 1est_A* ...
Length = 240
Score = 155 bits (393), Expect = 4e-43
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
+VGG +A WP QISL+ S++ H CG L +NW +TAAHCV+ + +G
Sbjct: 1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDR--ELTFRVVVG 58
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFE--YDLALLRFYEPVKFQPNIIPICVPE 508
EH+L+ Q VQ + HP ++ YD+ALLR + V + +P
Sbjct: 59 EHNLNQNNGT--EQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNSYVQLGVLPR 116
Query: 509 DDTNFV-GTSAHVTGWGRLYEG 529
T + ++TGWG
Sbjct: 117 AGTILANNSPCYITGWGLTRTN 138
Score = 82.6 bits (205), Expect = 7e-18
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
+VGG +A WP QISL+ S++ H CG L +NW +TAAHCV+
Sbjct: 1 VVGGTEAQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDR 49
Score = 49.9 bits (120), Expect = 9e-07
Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+G L LQ+ +P ++ ++C + + +CAG G C
Sbjct: 138 NGQLAQTLQQAYLPTVDYAICSSSSYWGST---VKNSMVCAGG-DGVRSGC 184
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus
scrofa} SCOP: b.47.1.2
Length = 241
Score = 154 bits (392), Expect = 5e-43
Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
+VGGE A WPWQ+SL+ + H CG L +++W +TAAHC+ + LG
Sbjct: 1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISS--SRTYRVVLG 58
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTF--EYDLALLRFYEPVKFQPNIIPICVPE 508
H LST E +V + H ++ D+ALL+ PV I C+P
Sbjct: 59 RHSLSTNEPG--SLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTDKIQLGCLPA 116
Query: 509 DDTNF-VGTSAHVTGWGRLYEG 529
T +VTGWGRL
Sbjct: 117 AGTILPNNYVCYVTGWGRLQTN 138
Score = 81.5 bits (202), Expect = 2e-17
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
+VGGE A WPWQ+SL+ + H CG L +++W +TAAHC+
Sbjct: 1 VVGGEDARPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISS 49
Score = 48.4 bits (116), Expect = 2e-06
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+G P +LQ+ + V++ + C + ICAG G SC
Sbjct: 138 NGASPDILQQGQLLVVDYATCSKPGWWGST---VKTNMICAGG-DGIISSC 184
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase;
2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Length = 240
Score = 154 bits (391), Expect = 6e-43
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 7/146 (4%)
Query: 390 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLR 448
I+GG++ + P+ S++ H CG L + W +TAAHC +
Sbjct: 2 EIIGGKEVSPHSRPFMASIQYGGH----HVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVV 57
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
LG H LS E Q ++ + D+ L++ K ++ + +
Sbjct: 58 LGAHSLSKNEASK--QTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRS 115
Query: 509 DDTNFVGTSAHVTGWGRLYEGRFRRS 534
+ GT VTGWG R S
Sbjct: 116 KTSLRSGTKCKVTGWGATDPDSLRPS 141
Score = 72.6 bits (179), Expect = 2e-14
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 562 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
I+GG++ + P+ S++ H CG L + W +TAAHC
Sbjct: 2 EIIGGKEVSPHSRPFMASIQYGGH----HVCGGVLIDPQWVLTAAHCQYR 47
Score = 48.3 bits (116), Expect = 3e-06
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
L+EV+V V++ LC + I + +CAG KG DSC
Sbjct: 137 SLRPSDTLREVTVTVLSRKLCNSQS-YYNGDPFITKDMVCAGDAKGQKDSC 186
>2xw9_A Complement factor D; immune system, hydrolase, serine protease,
alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB:
2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A
1fdp_A 2xwa_A 1dst_A 4d9q_A
Length = 228
Score = 153 bits (389), Expect = 7e-43
Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+GG +A P+ S++ H CG L E W ++AAHC+ED + + LG
Sbjct: 1 ILGGREAEAHARPYMASVQLNGA----HLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H LS E + V HP P T ++DL LL+ E P + P+ D
Sbjct: 57 AHSLSQPEP--SKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVD 114
Query: 511 TNF-VGTSAHVTGWGRLYEG 529
+ GT V GWG +
Sbjct: 115 RDVAPGTLCDVAGWGIVNHA 134
Score = 69.1 bits (170), Expect = 2e-13
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
I+GG +A P+ S++ H CG L E W ++AAHC+ED
Sbjct: 1 ILGGREAEAHARPYMASVQLNGA----HLCGGVLVAEQWVLSAAHCLED 45
Score = 48.7 bits (117), Expect = 2e-06
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
G P LQ V +PV++ + C G I E +CA DSC
Sbjct: 134 AGRRPDSLQHVLLPVLDRATCNRRTHHDG---AITERLMCAE--SNRRDSC 179
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG;
0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A
1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A*
1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E
1pqa_A*
Length = 224
Score = 153 bits (389), Expect = 8e-43
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 12/140 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IVGG A+ G +P+ +S+ R+ CG +L N N +TAAHCV S +R G
Sbjct: 1 IVGGTSASAGDFPFIVSIS---RNGG-PWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
++ + V HP + DLA+L+ + NI +
Sbjct: 57 SLSRTSGG-----ITSSLSSVRVHPSYS--GNNNDLAILKLSTSIPSGGNIGYARLAASG 109
Query: 511 TNF-VGTSAHVTGWGRLYEG 529
++ G+SA V GWG EG
Sbjct: 110 SDPVAGSSATVAGWGATSEG 129
Score = 74.1 bits (183), Expect = 4e-15
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL 612
IVGG A+ G +P+ +S+ R+ CG +L N N +TAAHCV
Sbjct: 1 IVGGTSASAGDFPFIVSIS---RNGG-PWCGGSLLNANTVLTAAHCVSGY 46
Score = 55.2 bits (134), Expect = 1e-08
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
P L +V+VP+++ + C Y + I CAG G DSC
Sbjct: 131 SSTPVNLLKVTVPIVSRATCRAQYGTSA----ITNQMFCAGVSSGGKDSC 176
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin
membrane, disulfide bond, glycoprotein, hydrolase,
membrane protease, secreted; 1.30A {Homo sapiens} PDB:
3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A
3dfl_A*
Length = 261
Score = 153 bits (389), Expect = 2e-42
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 8/141 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
I GG A G+WPWQ+S+ H CG +L +E W ++AAHC ++L
Sbjct: 1 ITGGSSAVAGQWPWQVSITYEGV----HVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKL 56
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
G H L + E + ++ + HP + + D+ALL+ P+ F I PI +P
Sbjct: 57 GAHQLDSYSEDA--KVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAA 114
Query: 510 DTNF-VGTSAHVTGWGRLYEG 529
+F G VTGWG +
Sbjct: 115 QASFPNGLHCTVTGWGHVAPS 135
Score = 73.9 bits (182), Expect = 8e-15
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
I GG A G+WPWQ+S+ H CG +L +E W ++AAHC
Sbjct: 1 ITGGSSAVAGQWPWQVSITYEGV----HVCGGSLVSEQWVLSAAHCFPS 45
Score = 56.1 bits (136), Expect = 9e-09
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 639 PLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEI---FICAGWRKGSFDSC 687
P LQ++ VP+I+ C ++Y E + +CAG+ +G D+C
Sbjct: 139 LTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYVEGGKDAC 190
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes
scabiei type hominis}
Length = 235
Score = 152 bits (386), Expect = 3e-42
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 12/141 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+GG+K+ K PW + + CG ++ N+ +TAA CV+ PSD+ + G
Sbjct: 1 IIGGKKSDITKEPWAVGVL---VDEK-PFCGGSILTANFVITAAQCVDGTKPSDISIHYG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKF-QPNIIPICVPED 509
+T+ + + ++ P T + + A++ P+K I +P
Sbjct: 57 SSYRTTKG-----TSVMAKKI-YIVRYHPLTMQNNYAVIETEMPIKLDDKTTKKIELPSL 110
Query: 510 DTNF-VGTSAHVTGWGRLYEG 529
+ TS V+GWG
Sbjct: 111 LYDPEPDTSVLVSGWGSTNFK 131
Score = 74.9 bits (185), Expect = 3e-15
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDL 612
I+GG+K+ K PW + + CG ++ N+ +TAA CV+
Sbjct: 1 IIGGKKSDITKEPWAVGVL---VDEK-PFCGGSILTANFVITAAQCVDGT 46
Score = 61.4 bits (150), Expect = 9e-11
Identities = 10/51 (19%), Positives = 17/51 (33%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
L E + V++ CE Y+ ++I + CAG
Sbjct: 132 SLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIG 182
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B
1qrz_A
Length = 247
Score = 152 bits (387), Expect = 3e-42
Identities = 50/155 (32%), Positives = 65/155 (41%), Gaps = 17/155 (10%)
Query: 381 CGRRLFP----SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 436
CG+ R+VGG A WPWQ+SLR +H CG L + W +TAAHC
Sbjct: 4 CGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRT---RFGMHFCGGTLISPEWVLTAAHC 60
Query: 437 VEDVP-PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPV 495
+E P PS + LG H E QE V + P D+ALL+ P
Sbjct: 61 LEKSPRPSSYKVILGAHQEVNLEPH--VQEIEVSRLFLEPTR------KDIALLKLSSPA 112
Query: 496 KFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
+IP C+P + T +TGWG
Sbjct: 113 VITDKVIPACLPSPNYVVADRTECFITGWGETQGT 147
Score = 81.5 bits (202), Expect = 2e-17
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
R+VGG A WPWQ+SLR +H CG L + W +TAAHC+E
Sbjct: 14 CPGRVVGGCVAHPHSWPWQVSLRT---RFGMHFCGGTLISPEWVLTAAHCLEK 63
Score = 53.4 bits (129), Expect = 6e-08
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+L+E +PVI N +C G + +CAG G DSC
Sbjct: 143 ETQGTFGAGLLKEAQLPVIENKVCNRYEFLNG---RVQSTELCAGHLAGGTDSC 193
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease,
fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens}
SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Length = 252
Score = 151 bits (384), Expect = 7e-42
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 10/147 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIR--STYLHKCGAALFNENWAVTAAHCVED-VPPSDLLL 447
I GG A PWQ ++ R CG L + W ++AAHC ++ PP L +
Sbjct: 1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQERFPPHHLTV 60
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLR----FYEPVKFQPNIIP 503
LG E Q+ V+ H +FD T++ D+ALL+ + +
Sbjct: 61 ILGRTYRVVPGEE--EQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRT 118
Query: 504 ICVPEDDTNF-VGTSAHVTGWGRLYEG 529
+C+P D T ++G+G+
Sbjct: 119 VCLPPADLQLPDWTECELSGYGKHEAL 145
Score = 75.0 bits (185), Expect = 3e-15
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 563 IVGGEKATFGKWPWQISLRQWIR--STYLHKCGAALFNENWAVTAAHCVED 611
I GG A PWQ ++ R CG L + W ++AAHC ++
Sbjct: 1 IKGGLFADIASHPWQAAIFAKHRRSPGERFLCGGILISSCWILSAAHCFQE 51
Score = 45.8 bits (109), Expect = 2e-05
Identities = 10/57 (17%), Positives = 20/57 (35%), Gaps = 9/57 (15%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSF------DSC 687
L+E V + +S C + + + + +CAG + D+C
Sbjct: 146 SPFYSERLKEAHVRLYPSSRCTSQHLLNRT---VTDNMLCAGDTRSGGPQANLHDAC 199
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor,
disease mutation glycoprotein, hydrolase, zymogen,
secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP:
b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A*
1hne_E 2rg3_A* 1b0f_A*
Length = 218
Score = 149 bits (380), Expect = 1e-41
Identities = 41/140 (29%), Positives = 59/140 (42%), Gaps = 8/140 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IVGG +A WP+ +SL+ H CGA L N+ ++AAHCV +V + + LG
Sbjct: 1 IVGGRRARPHAWPFMVSLQLRGG----HFCGATLIAPNFVMSAAHCVANVNVRAVRVVLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H+LS E Q VQ + +DP D+ +L+ N+ +P
Sbjct: 57 AHNLSRREP--TRQVFAVQRI-FENGYDPVNLLNDIVILQLNGSATINANVQVAQLPAQG 113
Query: 511 TNF-VGTSAHVTGWGRLYEG 529
G GWG L
Sbjct: 114 RRLGNGVQCLAMGWGLLGRN 133
Score = 68.7 bits (169), Expect = 3e-13
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
IVGG +A WP+ +SL+ H CGA L N+ ++AAHCV +
Sbjct: 1 IVGGRRARPHAWPFMVSLQLRGG----HFCGATLIAPNFVMSAAHCVAN 45
Score = 46.0 bits (110), Expect = 1e-05
Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 14/51 (27%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+ + SVLQE++V V+ + + +C R C
Sbjct: 133 NRGIASVLQELNVTVVTSLCRRSN--------------VCTLVRGRQAGVC 169
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor,
hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB:
1ybw_A 2r0k_A
Length = 283
Score = 152 bits (385), Expect = 1e-41
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 18/160 (11%)
Query: 381 CGRRL----FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHC 436
CGRR F RI+GG + G PW ++ C +L + W V+AAHC
Sbjct: 22 CGRRHKKRTFLRPRIIGGSSSLPGSHPWLAAIY-----IGDSFCAGSLVHTCWVVSAAHC 76
Query: 437 VEDVP-PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDP-RTFEYDLALLRFYEP 494
P + + LG+H + + Q ++ + + ++DL L+R +
Sbjct: 77 FSHSPPRDSVSVVLGQHFFNRTTDV--TQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKK 134
Query: 495 ----VKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
+ PIC+PE + F G + GWG L E
Sbjct: 135 GDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDEN 174
Score = 77.0 bits (190), Expect = 1e-15
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
F RI+GG + G PW ++ C +L + W V+AAHC
Sbjct: 31 FLRPRIIGGSSSLPGSHPWLAAIY-----IGDSFCAGSLVHTCWVVSAAHCFSH 79
Score = 48.1 bits (115), Expect = 4e-06
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
S L+E VP++ + C + I +CAG+ D+C
Sbjct: 175 VSGYSSSLREALVPLVADHKCSSPEVYGA---DISPNMLCAGYFDCKSDAC 222
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B*
1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B
1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Length = 131
Score = 146 bits (371), Expect = 1e-41
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 9/137 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IV GE+A G WPWQ+SL+ T H CG +L NENW VTAAHC + ++ G
Sbjct: 1 IVNGEEAVPGSWPWQVSLQ---DKTGFHFCGGSLINENWVVTAAHCG---VTTSDVVVAG 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
E D + E Q+ ++ V + +++ T D+ LL+ F + +C+P
Sbjct: 55 EFDQGSSSE--KIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSAS 112
Query: 511 TNFV-GTSAHVTGWGRL 526
+F GT+ TGWG
Sbjct: 113 DDFAAGTTCVTTGWGLT 129
Score = 75.7 bits (187), Expect = 1e-16
Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
IV GE+A G WPWQ+SL+ T H CG +L NENW VTAAHC
Sbjct: 1 IVNGEEAVPGSWPWQVSLQ---DKTGFHFCGGSLINENWVVTAAHCGVT 46
>1fxy_A Coagulation factor XA-trypsin chimera; protease,
chloromethylketone, hydrolase-hydrolase I complex; HET:
0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Length = 228
Score = 149 bits (379), Expect = 2e-41
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IVGG G+ PWQ L CG + +E + +TAAHC+ +R+G
Sbjct: 1 IVGGYNCKDGEVPWQALLIN---EENEGFCGGTILSEFYILTAAHCLYQ--AKRFKVRVG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
+ + EE G V++V H +F T+++D+A+LR P+ F+ N+ P +P
Sbjct: 56 DRNTEQEEG--GEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAP 113
Query: 511 TNFVGTSAHVTGWGRLYEG 529
GT ++GWG
Sbjct: 114 P-ATGTKCLISGWGNTASS 131
Score = 70.6 bits (174), Expect = 7e-14
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
IVGG G+ PWQ L CG + +E + +TAAHC+
Sbjct: 1 IVGGYNCKDGEVPWQALLIN---EENEGFCGGTILSEFYILTAAHCLYQ 46
Score = 48.7 bits (117), Expect = 2e-06
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
P LQ + PV++ + CE Y I C G+ +G DSC
Sbjct: 132 GADYPDELQCLDAPVLSQAKCEASYP-----GKITSNMFCVGFLEGGKDSC 177
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin
binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2
PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Length = 225
Score = 149 bits (378), Expect = 3e-41
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IVGG KA ++P+ S++ R H CG AL + + +TAA C + P + LG
Sbjct: 1 IVGGRKARPRQFPFLASIQNQGR----HFCGGALIHARFVMTAASCFQSQNPGVSTVVLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
+DL E ++ S +DP+ DL LL+ ++ + +P +
Sbjct: 57 AYDLRRRER--QSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTSSVTILPLPLQN 114
Query: 511 TNF-VGTSAHVTGWGRLYEG 529
GT V GWG G
Sbjct: 115 ATVEAGTRCQVAGWGSQRSG 134
Score = 66.8 bits (164), Expect = 1e-12
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQII 617
IVGG KA ++P+ S++ R H CG AL + + +TAA C + +
Sbjct: 1 IVGGRKARPRQFPFLASIQNQGR----HFCGGALIHARFVMTAASCFQSQNPGVS 51
Score = 48.7 bits (117), Expect = 2e-06
Identities = 9/52 (17%), Positives = 12/52 (23%), Gaps = 15/52 (28%)
Query: 637 DGPLPSVLQEVSVPVINNSLCE-TMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
G L + V+V V C +C G C
Sbjct: 134 GGRLSRFPRFVNVTVTPEDQCRPNN--------------VCTGVLTRRGGIC 171
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease,
inhibitor, complex, protease-substrate interactions,
collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Length = 226
Score = 146 bits (371), Expect = 3e-40
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IVGG +A WP Q +L + CG +L + W +TAAHC++ + + LG
Sbjct: 1 IVGGVEAVPNSWPHQAALF---IDDM-YFCGGSLISPEWILTAAHCMDG--AGFVDVVLG 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H++ +E + H ++ D+A++R PV I + +P D
Sbjct: 55 AHNIREDEA--TQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAIATVGLPSTD 112
Query: 511 TNFVGTSAHVTGWGRLYEG 529
VGT TGWG +
Sbjct: 113 V-GVGTVVTPTGWGLPSDS 130
Score = 68.3 bits (168), Expect = 4e-13
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
IVGG +A WP Q +L + CG +L + W +TAAHC++
Sbjct: 1 IVGGVEAVPNSWPHQAALF---IDDM-YFCGGSLISPEWILTAAHCMDG 45
Score = 39.8 bits (94), Expect = 0.002
Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 639 PLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+ VL++V VP+++N+ C+ +Y + + IC G +C
Sbjct: 133 GISDVLRQVDVPIMSNADCDAVYG------IVTDGNICIDSTGGK-GTC 174
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein,
zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo
sapiens} SCOP: b.47.1.2
Length = 221
Score = 144 bits (366), Expect = 1e-39
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IVGG +A P+ SL+ H CG L + ++ +TAAHC+ D+P + + LG
Sbjct: 1 IVGGHEAQPHSRPYMASLQMRGNPGS-HFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLG 59
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H++ T+E Q V V + +D D+ L++ P ++ + +P+ D
Sbjct: 60 AHNVRTQEP--TQQHFSVAQVFLNN-YDAENKLNDILLIQLSSPANLSASVATVQLPQQD 116
Query: 511 TNF-VGTSAHVTGWGRLYEG 529
GT GWGR+
Sbjct: 117 QPVPHGTQCLAMGWGRVGAH 136
Score = 71.4 bits (176), Expect = 3e-14
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQII 617
IVGG +A P+ SL+ H CG L + ++ +TAAHC+ D+ +++
Sbjct: 1 IVGGHEAQPHSRPYMASLQMRGNPGS-HFCGGTLIHPSFVLTAAHCLRDIPQRLV 54
Score = 47.5 bits (114), Expect = 3e-06
Identities = 10/51 (19%), Positives = 14/51 (27%), Gaps = 14/51 (27%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
P VLQE++V V+ IC + C
Sbjct: 136 HDPPAQVLQELNVTVVTFFCRPHN--------------ICTFVPRRKAGIC 172
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage,
salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar}
SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A
2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A
2eek_A
Length = 222
Score = 144 bits (366), Expect = 1e-39
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IVGG + P Q+SL H CG +L NENW V+AAHC S + +RLG
Sbjct: 1 IVGGYECKAYSQPHQVSLNSGY-----HFCGGSLVNENWVVSAAHCY----KSRVEVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
EH++ E Q V HP + + D+ L++ +P + P+ +P
Sbjct: 52 EHNIKVTEG--SEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSC 109
Query: 511 TNFVGTSAHVTGWGRLYEG 529
GT V+GWG
Sbjct: 110 AP-AGTMCTVSGWGNTMSS 127
Score = 71.4 bits (176), Expect = 4e-14
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
IVGG + P Q+SL H CG +L NENW V+AAHC +
Sbjct: 1 IVGGYECKAYSQPHQVSLNSGY-----HFCGGSLVNENWVVSAAHCYKSRV 46
Score = 51.0 bits (123), Expect = 3e-07
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+ LQ +++P+++ S C Y I CAG+ +G DSC
Sbjct: 127 STADSNKLQCLNIPILSYSDCNNSYP-----GMITNAMFCAGYLEGGKDSC 172
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double
six-stranded beta-barrels, hydrola glycosylation; HET:
NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB:
3s9b_A* 3s9a_A* 3sbk_A*
Length = 234
Score = 144 bits (366), Expect = 1e-39
Identities = 36/173 (20%), Positives = 66/173 (38%), Gaps = 21/173 (12%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
+VGG++ + P+ ++L ++ C AL N W +TAAHC ++ ++LG
Sbjct: 1 VVGGDECNINEHPFLVALYT--SASSTIHCAGALINREWVLTAAHCD----RRNIRIKLG 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H + E + R + P + D+ L+R PV + +I P+ +P
Sbjct: 55 MHSKNIRNEDEQIRVPRGKYF-CLNTKFPNGLDKDIMLIRLRRPVTYSTHIAPVSLPSRS 113
Query: 511 TNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEM-------ATCWNHFLGNRI 556
VG+ + GWG++ + P C +
Sbjct: 114 RG-VGSRCRIMGWGKISTTTY------PDVPHCTNIFIVKHKWCEPLYPWVPA 159
Score = 70.7 bits (174), Expect = 7e-14
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
+VGG++ + P+ ++L ++ C AL N W +TAAHC
Sbjct: 1 VVGGDECNINEHPFLVALYT--SASSTIHCAGALINREWVLTAAHCDRRNI 49
Score = 53.0 bits (128), Expect = 7e-08
Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
++ P V ++ ++ + CE +Y +CAG KG D+C
Sbjct: 127 KISTTTYPDVPHCTNIFIVKHKWCEPLYPWVP----ADSRTLCAGILKGGRDTC 176
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation,
hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG;
2.30A {Homo sapiens} PDB: 2psy_A*
Length = 227
Score = 143 bits (364), Expect = 2e-39
Identities = 37/139 (26%), Positives = 53/139 (38%), Gaps = 9/139 (6%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+ G PWQ +L CGA L + W +TAAHC +RLG
Sbjct: 1 IINGSDCDMHTQPWQAALLLRPNQ---LYCGAVLVHPQWLLTAAHCR----KKVFRVRLG 53
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
+ LS E Q + HP + DL L++ ++ ++ PI V
Sbjct: 54 HYSLSPVYESGQ-QMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSSHC 112
Query: 511 TNFVGTSAHVTGWGRLYEG 529
+ GT V+GWG
Sbjct: 113 PS-AGTKCLVSGWGTTKSP 130
Score = 70.3 bits (173), Expect = 8e-14
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
I+ G PWQ +L CGA L + W +TAAHC + ++
Sbjct: 1 IINGSDCDMHTQPWQAALLLRPNQ---LYCGAVLVHPQWLLTAAHCRKKVF 48
Score = 47.2 bits (113), Expect = 6e-06
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
P VLQ +++ V++ CE Y I + CAG + G DSC
Sbjct: 131 QVHFPKVLQCLNISVLSQKRCEDAYP-----RQIDDTMFCAGDKAGR-DSC 175
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation,
fibrinolysis, plasminogen activation; HET: ABV; 1.45A
{Homo sapiens} PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U*
1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U*
2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U*
1vj9_U* 1sc8_U* ...
Length = 247
Score = 144 bits (366), Expect = 2e-39
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 11/148 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIR-STYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLR 448
I+GGE T PW ++ + R + + CG +L + W ++A HC D P D ++
Sbjct: 1 IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVY 60
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEY--DLALLR----FYEPVKFQPNII 502
LG L++ + + V+ + H + T + D+ALL+ + I
Sbjct: 61 LGRSRLNSNTQG--EMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQ 118
Query: 503 PICVPEDDTNF-VGTSAHVTGWGRLYEG 529
I +P + GTS +TG+G+
Sbjct: 119 TISLPSMYNDPQFGTSCEITGFGKENST 146
Score = 75.8 bits (187), Expect = 2e-15
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 563 IVGGEKATFGKWPWQISLRQWIR-STYLHKCGAALFNENWAVTAAHCVED 611
I+GGE T PW ++ + R + + CG +L + W ++A HC D
Sbjct: 1 IIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFID 50
Score = 46.9 bits (112), Expect = 7e-06
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
D P L+ V +I++ C+ + + +CA + DSC
Sbjct: 147 DYLYPEQLKMTVVKLISHRECQQPHYYGS---EVTTKMLCAADPQWKTDSC 194
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate
conformations, alternative splicing, glycoprotein,
hydrolase, protease, secreted; HET: K7J; 1.00A {Homo
sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Length = 224
Score = 143 bits (364), Expect = 2e-39
Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 13/139 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+ G G PWQ++L S CG L NE W +TAAHC ++ + LG
Sbjct: 1 IIDGAPCARGSHPWQVALL----SGNQLHCGGVLVNERWVLTAAHCK----MNEYTVHLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
L Q + HP + +T DL L++ + + + +P
Sbjct: 53 SDTLGDRRA----QRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKVRLPSRC 108
Query: 511 TNFVGTSAHVTGWGRLYEG 529
GT+ V+GWG
Sbjct: 109 EP-PGTTCTVSGWGTTTSP 126
Score = 70.3 bits (173), Expect = 8e-14
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
I+ G G PWQ++L S CG L NE W +TAAHC + +
Sbjct: 1 IIDGAPCARGSHPWQVALL----SGNQLHCGGVLVNERWVLTAAHCKMNEY 47
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease,
zymogen; 2.50A {Mus musculus} PDB: 3g01_A
Length = 227
Score = 143 bits (364), Expect = 2e-39
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 7/140 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+GG + + P+ CG L + + +TAAHC + + LG
Sbjct: 1 IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCK----GRSMTVTLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H++ +EE Q V HP ++P D+ LL+ K + P+ +P +
Sbjct: 57 AHNIKAKEET--QQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRN 114
Query: 511 TNF-VGTSAHVTGWGRLYEG 529
+ G +V GWG++
Sbjct: 115 AHVKPGDECYVAGWGKVTPD 134
Score = 72.2 bits (178), Expect = 2e-14
Identities = 12/51 (23%), Positives = 19/51 (37%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
I+GG + + P+ CG L + + +TAAHC
Sbjct: 1 IIGGNEISPHSRPYMAYYEFLKVGGKKMFCGGFLVRDKFVLTAAHCKGRSM 51
Score = 52.9 bits (128), Expect = 7e-08
Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
DG P L EV + V + +CE+ ++ IC G K S
Sbjct: 134 DGEFPKTLHEVKLTVQKDQVCESQFQ--SSY--NRANEICVGDSKIKGASF 180
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase,
secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A
2zgj_A
Length = 240
Score = 143 bits (364), Expect = 3e-39
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+GG + P+ SL++ H CG L + W +TAAHC+ + L L LG
Sbjct: 1 IIGGREVIPHSRPYMASLQR----NGSHLCGGVLVHPKWVLTAAHCLAQ-RMAQLRLVLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP-RTFEYDLALLRFYEPVKFQPNIIPICVPED 509
H L + ++ HP++ P E DLALL+ VK I P+ +P
Sbjct: 56 LHTLDSPG-----LTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIRPLALPSK 110
Query: 510 DTNF-VGTSAHVTGWGRLYEG 529
GT + GWG ++G
Sbjct: 111 RQVVAAGTRCSMAGWGLTHQG 131
Score = 71.1 bits (175), Expect = 6e-14
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQI 616
I+GG + P+ SL++ H CG L + W +TAAHC+ +Q+
Sbjct: 1 IIGGREVIPHSRPYMASLQR----NGSHLCGGVLVHPKWVLTAAHCLAQRMAQL 50
Score = 51.8 bits (125), Expect = 2e-07
Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
G L VL+E+ + V++ +C G + +C C
Sbjct: 131 GGRLSRVLRELDLQVLDTRMCNNSRFWNG---SLSPSMVCLAADSKDQAPC 178
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus}
PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A
1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A*
1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A
...
Length = 223
Score = 143 bits (362), Expect = 4e-39
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IVGG P+Q+SL H CG +L N W V+AAHC S + +RLG
Sbjct: 1 IVGGYTCGANTVPYQVSLNSGY-----HFCGGSLINSQWVVSAAHCY----KSGIQVRLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
E +++ E Q HP ++ T D+ L++ + I +P
Sbjct: 52 EDNINVVEG--NEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSC 109
Query: 511 TNFVGTSAHVTGWGRLYEG 529
+ GT ++GWG
Sbjct: 110 AS-AGTQCLISGWGNTKSS 127
Score = 70.6 bits (174), Expect = 7e-14
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
IVGG P+Q+SL H CG +L N W V+AAHC +
Sbjct: 1 IVGGYTCGANTVPYQVSLNSGY-----HFCGGSLINSQWVVSAAHCYKSGI 46
Score = 49.4 bits (119), Expect = 8e-07
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
P VL+ + P++++S C++ Y I CAG+ +G DSC
Sbjct: 128 GTSYPDVLKCLKAPILSDSSCKSAYP-----GQITSNMFCAGYLEGGKDSC 173
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus}
SCOP: b.47.1.2
Length = 224
Score = 142 bits (361), Expect = 6e-39
Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 7/140 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+GG ++ P+ L CG L + + +TAAHC ++ + LG
Sbjct: 1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCK----GREITVILG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
HD+ E Q+ +V+ H ++ +D+ LL+ + V+ P + + +P
Sbjct: 57 AHDVRKRES--TQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPS 114
Query: 511 TNF-VGTSAHVTGWGRLYEG 529
G GWG+
Sbjct: 115 DFIHPGAMCWAAGWGKTGVR 134
Score = 72.2 bits (178), Expect = 2e-14
Identities = 13/51 (25%), Positives = 20/51 (39%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
I+GG ++ P+ L CG L + + +TAAHC
Sbjct: 1 IIGGVESIPHSRPYMAHLDIVTEKGLRVICGGFLISRQFVLTAAHCKGREI 51
Score = 49.8 bits (120), Expect = 6e-07
Identities = 7/51 (13%), Positives = 16/51 (31%), Gaps = 6/51 (11%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
P L+EV + +++ C + + +C G +
Sbjct: 134 RDPTSYTLREVELRIMDEKACVDYR------YYEYKFQVCVGSPTTLRAAF 178
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody,
allosteric inhibitor, EGF-like DO glycoprotein,
hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo
sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Length = 248
Score = 143 bits (362), Expect = 8e-39
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 14/146 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVP-PSDLLLRL 449
I+GG + G PW ++ C +L + W V+AAHC P + + L
Sbjct: 1 IIGGSSSLPGSHPWLAAIY-----IGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVL 55
Query: 450 GEHDLSTEEEPYGYQERRVQIVASHPQFDP-RTFEYDLALLRFYEP----VKFQPNIIPI 504
G+H + + Q ++ + + ++DL L+R + + PI
Sbjct: 56 GQHFFNRTTDV--TQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPI 113
Query: 505 CVPEDDTNFV-GTSAHVTGWGRLYEG 529
C+PE + F G + GWG L E
Sbjct: 114 CLPEPGSTFPAGHKCQIAGWGHLDEN 139
Score = 72.3 bits (178), Expect = 3e-14
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
I+GG + G PW ++ C +L + W V+AAHC
Sbjct: 1 IIGGSSSLPGSHPWLAAIY-----IGDSFCAGSLVHTCWVVSAAHCFSH 44
Score = 48.8 bits (117), Expect = 2e-06
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
S L+E VP++ + C + I +CAG+ D+C
Sbjct: 140 VSGYSSSLREALVPLVADHKCSSPEVYGA---DISPNMLCAGYFDCKSDAC 187
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC
MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB:
1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Length = 227
Score = 141 bits (359), Expect = 1e-38
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+GG +A P+ L W + + +CG L +++ +TAAHC S + + LG
Sbjct: 1 IIGGHEAKPHSRPYMAYLMIWDQKSL-KRCGGFLIRDDFVLTAAHCW----GSSINVTLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H++ +E Q V+ HP ++P+ F D+ LL+ K + P+ +P +
Sbjct: 56 AHNIKEQEPTQ--QFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNK 113
Query: 511 TNF-VGTSAHVTGWGRLYEG 529
G + V GWG+
Sbjct: 114 AQVKPGQTCSVAGWGQTAPL 133
Score = 69.8 bits (172), Expect = 1e-13
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
I+GG +A P+ L W + + +CG L +++ +TAAHC
Sbjct: 1 IIGGHEAKPHSRPYMAYLMIWDQKSL-KRCGGFLIRDDFVLTAAHCWGSSI 50
Score = 56.0 bits (136), Expect = 6e-09
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
G LQEV + V + CE+ R + I +C G + S
Sbjct: 133 LGKHSHTLQEVKMTVQEDRKCESDLRHY----YDSTIELCVGDPEIKKTSF 179
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6,
benzamidine, protease, brain serine protease,
myelencephalon specific protease, MSP, ZYME; 1.56A {Homo
sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Length = 223
Score = 141 bits (358), Expect = 2e-38
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 11/141 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
+V G P+Q +L CG L + W +TAAHC +L + LG
Sbjct: 1 LVHGGPCDKTSHPYQAALYTSGH----LLCGGVLIHPLWVLTAAHCK----KPNLQVFLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
+H+L E ++ V HP +D + + D+ LLR P K I P+ + D
Sbjct: 53 KHNLRQRESSQ--EQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDC 110
Query: 511 TNFVGTSAHVTGWGRLYEGRF 531
+ TS H+ GWG+ +G F
Sbjct: 111 S-ANTTSCHILGWGKTADGDF 130
Score = 84.1 bits (209), Expect = 1e-18
Identities = 29/181 (16%), Positives = 49/181 (27%), Gaps = 65/181 (35%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS-------- 614
+V G P+Q +L CG L + W +TAAHC +
Sbjct: 1 LVHGGPCDKTSHPYQAALYTSGH----LLCGGVLIHPLWVLTAAHCKKPNLQVFLGKHNL 56
Query: 615 -------QIIP---IIQNCRRRESN------LWKMA-------------LADGPLP---- 641
+ + + ++ L ++A L
Sbjct: 57 RQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCSANTTS 116
Query: 642 ---------------SVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDS 686
+Q + +++ CE Y I + +CAG K DS
Sbjct: 117 CHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYP-----GQITQNMLCAGDEKYGKDS 171
Query: 687 C 687
C
Sbjct: 172 C 172
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A*
4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A*
2hvx_A* 3s0n_A* 2rdl_A
Length = 226
Score = 141 bits (358), Expect = 2e-38
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 7/140 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+GG + P+ L + CG L N+ +TAAHC + + LG
Sbjct: 1 IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCA----GRSITVTLG 56
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H+++ EE+ +Q+ V HP+++ T +D+ LL+ E + + P
Sbjct: 57 AHNITEEEDT--WQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQF 114
Query: 511 TNF-VGTSAHVTGWGRLYEG 529
G V GWGR
Sbjct: 115 NFVPPGRMCRVAGWGRTGVL 134
Score = 71.0 bits (175), Expect = 5e-14
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
I+GG + P+ L + CG L N+ +TAAHC
Sbjct: 1 IIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGRSI 51
Score = 48.7 bits (117), Expect = 2e-06
Identities = 8/51 (15%), Positives = 18/51 (35%), Gaps = 6/51 (11%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
P LQEV + +++ C + + +C G + + +
Sbjct: 134 LKPGSDTLQEVKLRLMDPQACSHFR------DFDHNLQLCVGNPRKTKSAF 178
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural
proteo europe, spine, structural genomics, hydrolase;
HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Length = 223
Score = 141 bits (357), Expect = 2e-38
Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 10/141 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+ GE + PWQ +L C L + W ++AAHC + + LG
Sbjct: 1 IINGEDCSPHSQPWQAALVMENE----LFCSGVLVHPQWVLSAAHCF----QNSYTIGLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H L ++EP Q + HP+++ DL L++ E V I I +
Sbjct: 53 LHSLEADQEPGS-QMVEASLSVRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIASQC 111
Query: 511 TNFVGTSAHVTGWGRLYEGRF 531
G S V+GWG L GR
Sbjct: 112 PT-AGNSCLVSGWGLLANGRM 131
Score = 67.6 bits (166), Expect = 8e-13
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
I+ GE + PWQ +L C L + W ++AAHC ++ +
Sbjct: 1 IINGEDCSPHSQPWQAALVMENE----LFCSGVLVHPQWVLSAAHCFQNSY 47
Score = 52.9 bits (128), Expect = 6e-08
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
LA+G +P+VLQ V+V V++ +C +Y CAG + DSC
Sbjct: 125 LLANGRMPTVLQCVNVSVVSEEVCSKLYD-----PLYHPSMFCAGGGQDQKDSC 173
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine
esterase, glycosylation, extracellular; HET: NAG; 1.75A
{Agkistrodon halys}
Length = 238
Score = 141 bits (357), Expect = 3e-38
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 8/139 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+GG++ + + ++L + CG L N+ W +TAAHC + ++LG
Sbjct: 1 IIGGDECNINEHRFLVALY--TSRSRTLFCGGTLINQEWVLTAAHCD----RKNFRIKLG 54
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H E + + ++ D+ L+R PVK +I P +P
Sbjct: 55 MHSKKVPNEDEQ-TRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHIAPFSLPSSP 113
Query: 511 TNFVGTSAHVTGWGRLYEG 529
+ G+ + GWGR+
Sbjct: 114 PSV-GSVCRIMGWGRISPT 131
Score = 68.7 bits (169), Expect = 3e-13
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
I+GG++ + + ++L + CG L N+ W +TAAHC +
Sbjct: 1 IIGGDECNINEHRFLVALY--TSRSRTLFCGGTLINQEWVLTAAHCDRKNF 49
Score = 52.6 bits (127), Expect = 9e-08
Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+G P V V++ ++ +C Y F +CAG +G D+C
Sbjct: 132 EGTYPDVPHCVNINLLEYEMCRAPYP--EFELPATSRTLCAGILEGGKDTC 180
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG;
2.40A {Bos taurus} SCOP: b.47.1.2
Length = 227
Score = 140 bits (356), Expect = 3e-38
Identities = 39/140 (27%), Positives = 57/140 (40%), Gaps = 8/140 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+GG +A P+ L H CG L E++ +TAAHC+ S + + LG
Sbjct: 1 IIGGHEAKPHSRPYMAFLLFKTSGKS-HICGGFLVREDFVLTAAHCL----GSSINVTLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H++ E Q V+ HP ++ T D+ LL+ + PI +P
Sbjct: 56 AHNIMERERTQ--QVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDKVSPINLPRSL 113
Query: 511 TNF-VGTSAHVTGWGRLYEG 529
G V GWGRL
Sbjct: 114 AEVKPGMMCSVAGWGRLGVN 133
Score = 69.1 bits (170), Expect = 3e-13
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
I+GG +A P+ L H CG L E++ +TAAHC+
Sbjct: 1 IIGGHEAKPHSRPYMAFLLFKTSGKS-HICGGFLVREDFVLTAAHCLGSSI 50
Score = 54.4 bits (132), Expect = 2e-08
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+ P LQEV + V + C ++ +IP ICAG +S
Sbjct: 133 NMPSTDKLQEVDLEVQSEEKCIARFK-----NYIPFTQICAGDPSKRKNSF 178
>1cgh_A Cathepsin G; inflammation, specificity, serine protease,
hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A*
1kyn_A*
Length = 224
Score = 140 bits (355), Expect = 4e-38
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+GG ++ P+ L+ + +CG L E++ +TAAHC S++ + LG
Sbjct: 1 IIGGRESRPHSRPYMAYLQIQSPAGQ-SRCGGFLVREDFVLTAAHCW----GSNINVTLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H++ E Q + HPQ++ RT + D+ LL+ V+ N+ P+ +P
Sbjct: 56 AHNIQRREN--TQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQ 113
Query: 511 TNF-VGTSAHVTGWGRLYEGRF 531
GT V GWGR+ R
Sbjct: 114 EGLRPGTLCTVAGWGRVSMRRG 135
Score = 69.1 bits (170), Expect = 2e-13
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
I+GG ++ P+ L+ + +CG L E++ +TAAHC
Sbjct: 1 IIGGRESRPHSRPYMAYLQIQSPAGQ-SRCGGFLVREDFVLTAAHCWGSNI 50
Score = 53.3 bits (129), Expect = 5e-08
Identities = 10/53 (18%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Query: 635 LADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
++ L+EV + V + C ++ + P IC G R+ +
Sbjct: 130 VSMRRGTDTLREVQLRVQRDRQCLRIFG-----SYDPRRQICVGDRRERKAAF 177
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes,
fibrinogen binding, glycosylati hydrolase; 1.43A
{Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 1bqy_A*
Length = 234
Score = 139 bits (352), Expect = 1e-37
Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 12/145 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
++GG++ + ++ ST C L NE W +TAAHC ++ ++LG
Sbjct: 1 VIGGDECNINEHRSLVAFF---NSTG-FFCSGTLINEEWVLTAAHCD----NTNFQMKLG 52
Query: 451 EHDLSTEEEPYGYQERRV-QIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
H E Q R + + + + D+ L++ V +I+P+ +P
Sbjct: 53 VHSKKVLNEDE--QTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHIVPLSLPSS 110
Query: 510 DTNFVGTSAHVTGWGRLYEGRFRRS 534
+ G+ H+ GWG + +
Sbjct: 111 PPSV-GSVCHIMGWGSITPIKVTYP 134
Score = 68.0 bits (167), Expect = 6e-13
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
++GG++ + ++ ST C L NE W +TAAHC +
Sbjct: 1 VIGGDECNINEHRSLVAFF---NSTG-FFCSGTLINEEWVLTAAHCDNTNF 47
Score = 50.2 bits (121), Expect = 5e-07
Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
P V + ++++++C+ Y + +CAG +G D+C
Sbjct: 130 KVTYPDVPYCAYINLLDDAVCQAGYP--ELL--TEYRTLCAGILEGGKDTC 176
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET:
NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB:
2aip_A*
Length = 231
Score = 138 bits (351), Expect = 2e-37
Identities = 28/144 (19%), Positives = 58/144 (40%), Gaps = 11/144 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
++GG++ + + + CG L N+ W +TA HC ++ + LG
Sbjct: 1 VIGGDECNINEHRFLALVY-----ANGSLCGGTLINQEWVLTARHCD----RGNMRIYLG 51
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H+L + + + + ++ D+ L+R PV+ +I P+ +P +
Sbjct: 52 MHNLKVLNKDAL-RRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIAPLSLPSNP 110
Query: 511 TNFVGTSAHVTGWGRLYEGRFRRS 534
+ VG+ + GWG +
Sbjct: 111 PS-VGSVCRIMGWGTITSPNATLP 133
Score = 65.2 bits (160), Expect = 5e-12
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
++GG++ + + + CG L N+ W +TA HC
Sbjct: 1 VIGGDECNINEHRFLALVY-----ANGSLCGGTLINQEWVLTARHCDRGNM 46
Score = 52.5 bits (127), Expect = 9e-08
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+ LP V ++ +++ ++C+ Y+ + +CAG +G D+C
Sbjct: 129 NATLPDVPHCANINILDYAVCQAAYK------GLAATTLCAGILEGGKDTC 173
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation;
1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Length = 230
Score = 138 bits (350), Expect = 2e-37
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+ G +A G +P+Q L ++ CG +L + W +TAAHCV D +++ LG
Sbjct: 1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHD--AVSVVVYLG 58
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVP--- 507
E + + SH F+P T+ D+AL++ V++ NI PI +P
Sbjct: 59 SAVQYEGE-----AVVNSERIISHSMFNPDTYLNDVALIKI-PHVEYTDNIQPIRLPSGE 112
Query: 508 EDDTNFVGTSAHVTGWGRLYEG 529
E + F A V+GWG+
Sbjct: 113 ELNNKFENIWATVSGWGQSNTD 134
Score = 74.2 bits (183), Expect = 5e-15
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWS 614
I+ G +A G +P+Q L ++ CG +L + W +TAAHCV D S
Sbjct: 1 IINGYEAYTGLFPYQAGLDITLQDQRRVWCGGSLIDNKWILTAAHCVHDAVS 52
Score = 40.3 bits (95), Expect = 0.001
Identities = 13/47 (27%), Positives = 15/47 (31%), Gaps = 5/47 (10%)
Query: 641 PSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+LQ VI+N C Y I E IC G C
Sbjct: 135 TVILQYTYNLVIDNDRCAQEYPPGI----IVESTICGDTSDGK-SPC 176
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A
{Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Length = 234
Score = 137 bits (348), Expect = 4e-37
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+GG + T P+ + L C AL ++W +TAAHC + + LG
Sbjct: 1 IIGGNEVTPHSRPYMVLLSL----DRKTICAGALIAKDWVLTAAHCNLN---KRSQVILG 53
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
H ++ EE Q V+ +P +DP T E DL LL+ E K + + +P+
Sbjct: 54 AHSITREEPTK--QIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYVTILHLPKKG 111
Query: 511 TNF-VGTSAHVTGWGRLYEG 529
+ GT V GWGR +
Sbjct: 112 DDVKPGTMCQVAGWGRTHNS 131
Score = 64.5 bits (158), Expect = 8e-12
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
I+GG + T P+ + L C AL ++W +TAAHC +
Sbjct: 1 IIGGNEVTPHSRPYMVLLSL----DRKTICAGALIAKDWVLTAAHCNLN 45
Score = 53.3 bits (129), Expect = 5e-08
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
L+EV + +I+ +C F I +CAG +G DSC
Sbjct: 131 SASWSDTLREVEITIIDRKVCNDRNH-YNFNPVIGMNMVCAGSLRGGRDSC 180
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A,
LUNG; chymotrypsin homology, hormone/growth factor
complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Length = 240
Score = 135 bits (343), Expect = 3e-36
Identities = 35/140 (25%), Positives = 50/140 (35%), Gaps = 12/140 (8%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
+V G W +SLR + H CG +L E+W +TA C D LG
Sbjct: 1 VVNGIPTR-TNIGWMVSLRYRNK----HICGGSLIKESWVLTARQCFPSRDLKDYEAWLG 55
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDD 510
HD+ + Q V + P+ DL L++ P + I +P
Sbjct: 56 IHDVHGRGDEKCKQVLNVSQLVYGPEG------SDLVLMKLARPAVLDDFVSTIDLPNYG 109
Query: 511 TNF-VGTSAHVTGWGRLYEG 529
+ TS V GWG
Sbjct: 110 STIPEKTSCSVYGWGYTGLI 129
Score = 69.2 bits (170), Expect = 2e-13
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
+V G W +SLR + H CG +L E+W +TA C
Sbjct: 1 VVNGIPTR-TNIGWMVSLRYRNK----HICGGSLIKESWVLTARQCFPS 44
Score = 53.0 bits (128), Expect = 7e-08
Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
+L+ + ++ N C +R + E ICAG K CE
Sbjct: 125 YTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVT---LNESEICAGAEKIGSGPCE 176
>2asu_B Hepatocyte growth factor-like protein; serine proteinase,
beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Length = 234
Score = 135 bits (342), Expect = 3e-36
Identities = 40/176 (22%), Positives = 57/176 (32%), Gaps = 29/176 (16%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED--VPPSDLLLR 448
+VGG G PW +SLR H CG +L E W +TA C +P + +
Sbjct: 1 VVGGHP---GNSPWTVSLRN---RQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVW 54
Query: 449 LGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPE 508
LG + + Q V + P L LL+ V + IC+P
Sbjct: 55 LGTLFQNPQHGEPSLQRVPVAKMVCGPSG------SQLVLLKLERSVTLNQRVALICLPP 108
Query: 509 DDTNF-VGTSAHVTGWGRLYEGRFRRSYGHPATRQE-------MATCWNHFLGNRI 556
+ GT + GWG G+ C N R+
Sbjct: 109 EWYVVPPGTKCEIAGWGETKGT------GNDTVLNVALLNVISNQEC-NIKHRGRV 157
Score = 69.9 bits (172), Expect = 1e-13
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
+VGG G PW +SLR H CG +L E W +TA C
Sbjct: 1 VVGGHP---GNSPWTVSLRN---RQGQHFCGGSLVKEQWILTARQCFSS 43
Score = 51.8 bits (125), Expect = 2e-07
Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 5/55 (9%)
Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
+VL + VI+N C +R + E +C +CE
Sbjct: 126 ETKGTGNDTVLNVALLNVISNQECNIKHRGR-----VRESEMCTEGLLAPVGACE 175
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase -
serine proteinase (GAM inactive serine proteinase
(alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP:
b.47.1.2
Length = 240
Score = 135 bits (341), Expect = 4e-36
Identities = 36/158 (22%), Positives = 66/158 (41%), Gaps = 22/158 (13%)
Query: 388 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLL 447
++ V + PW +++ ++ + ++CG L + NW +TAAHC +
Sbjct: 1 AAPPVQSQVDCENSQPWHVAVYRFNK----YQCGGVLLDRNWVLTAAHCY----NDKYQV 52
Query: 448 RLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRT-----------FEYDLALLRFYEPVK 496
LG+++ +E Q R V HP F+ + DL LLR +P
Sbjct: 53 WLGKNNFLEDEPS--DQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLSKPAD 110
Query: 497 FQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRS 534
+ PI +P ++ G++ +GWG +F+
Sbjct: 111 ITDVVKPITLPTEEPKL-GSTCLASGWGSTTPIKFKYP 147
Score = 73.4 bits (181), Expect = 1e-14
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
++ V + PW +++ ++ + ++CG L + NW +TAAHC D +
Sbjct: 1 AAPPVQSQVDCENSQPWHVAVYRFNK----YQCGGVLLDRNWVLTAAHCYNDKY 50
Score = 50.3 bits (121), Expect = 6e-07
Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
P LQ V++ ++ N C+ + + + +CAG G +C
Sbjct: 143 KFKYPDDLQCVNLKLLPNEDCDKAHE-----MKVTDAMLCAGEMDGGSYTC 188
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus
musculus} SCOP: b.47.1.2
Length = 225
Score = 134 bits (339), Expect = 6e-36
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 14/147 (9%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+ G + PWQ +L CG L + W +TAAHC +RLG
Sbjct: 1 ILEGRECIPHSQPWQAALF----QGERLICGGVLVGDRWVLTAAHCK----KQKYSVRLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFD---PRTFEYDLALLRFYEPVKFQPNIIPICVP 507
+H L + ++P QE +V HP ++ P +D+ L+R + P+ +
Sbjct: 53 DHSLQSRDQP--EQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDKVKPVQLA 110
Query: 508 EDDTNFVGTSAHVTGWGRLYEGRFRRS 534
VG ++GWG + +
Sbjct: 111 NLCPK-VGQKCIISGWGTVTSPQENFP 136
Score = 67.2 bits (165), Expect = 1e-12
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
I+ G + PWQ +L CG L + W +TAAHC + +
Sbjct: 1 ILEGRECIPHSQPWQAALF----QGERLICGGVLVGDRWVLTAAHCKKQKY 47
Score = 48.3 bits (116), Expect = 2e-06
Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 6/51 (11%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
P+ L V + + + CE Y I E +CAG G+ D+C
Sbjct: 132 QENFPNTLNCAEVKIYSQNKCERAYP-----GKITEGMVCAGSSNGA-DTC 176
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease
inhibitor, protease, GLYC secreted, serine protease
inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo
sapiens}
Length = 283
Score = 135 bits (342), Expect = 9e-36
Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 16/163 (9%)
Query: 369 SQGINMSNYKEVCGRRLFP--SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFN 426
+QG + + C PWQ+ L S CG +
Sbjct: 29 AQGYRLGEDHKQCVPHDQCACGVLTSEKRAPDLQDLPWQVKLT---NSEGKDFCGGVIIR 85
Query: 427 ENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDL 486
EN+ +T A C ++ ++ + S + ++ V H ++D E DL
Sbjct: 86 ENFVLTTAKCSLL--HRNITVKTYFNRTSQDP-----LMIKITHVHVHMRYDADAGENDL 138
Query: 487 ALLRFYEPVKFQPNIIPICVPEDDTN----FVGTSAHVTGWGR 525
+LL P++ +P+C PE D T ++GW R
Sbjct: 139 SLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWAR 181
Score = 66.7 bits (163), Expect = 3e-12
Identities = 12/51 (23%), Positives = 16/51 (31%), Gaps = 3/51 (5%)
Query: 560 SSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVE 610
PWQ+ L S CG + EN+ +T A C
Sbjct: 50 GVLTSEKRAPDLQDLPWQVKLT---NSEGKDFCGGVIIRENFVLTTAKCSL 97
Score = 46.2 bits (110), Expect = 2e-05
Identities = 6/52 (11%), Positives = 12/52 (23%), Gaps = 8/52 (15%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
L + L V ++ C + + C S +
Sbjct: 183 GTDLGNSLTTRPVTLVEGEECGQVLNVT-----VTTRTYCER---SSVAAMH 226
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor
complex, blood coagulation, CL PAIR of basic residues,
disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A
{Homo sapiens}
Length = 317
Score = 135 bits (342), Expect = 2e-35
Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 14/143 (9%)
Query: 387 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLL 446
PWQ+ L S CG + EN+ +T A C ++
Sbjct: 90 CGVLTSEKRAPDLQDLPWQVKLT---NSEGKDFCGGVIIRENFVLTTAKCSLL--HRNIT 144
Query: 447 LRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICV 506
++ + S + ++ V H ++D E DL+LL P++ +P+C
Sbjct: 145 VKTYFNRTSQDP-----LMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCT 199
Query: 507 PEDDTN----FVGTSAHVTGWGR 525
PE D T ++GW R
Sbjct: 200 PEKDFAEHLLIPRTRGLLSGWAR 222
Score = 68.6 bits (168), Expect = 1e-12
Identities = 12/53 (22%), Positives = 16/53 (30%), Gaps = 3/53 (5%)
Query: 559 PSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
PWQ+ L S CG + EN+ +T A C
Sbjct: 90 CGVLTSEKRAPDLQDLPWQVKLT---NSEGKDFCGGVIIRENFVLTTAKCSLL 139
Score = 45.1 bits (107), Expect = 5e-05
Identities = 6/51 (11%), Positives = 12/51 (23%), Gaps = 8/51 (15%)
Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
L + L V ++ C + + C S +
Sbjct: 225 TDLGNSLTTRPVTLVEGEECGQVLNVT-----VTTRTYCER---SSVAAMH 267
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human
complement system, glycoprotein, SP, VWFA,; HET: NAG;
1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Length = 509
Score = 139 bits (351), Expect = 3e-35
Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 32/166 (19%)
Query: 380 VCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 439
+CG + + + PW ++++ + C AL ++ W +TAAHC D
Sbjct: 219 ICGVG------NMSANASDQERTPWHVTIKPKSQ----ETCRGALISDQWVLTAAHCFRD 268
Query: 440 V-PPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFD---------PRTFEYDLALL 489
S + +G+ +E ++ P FD + D+ALL
Sbjct: 269 GNDHSLWRVNVGDPKSQWG------KEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALL 322
Query: 490 RFYEPVKFQPNIIPICVPEDDTNFV------GTSAHVTGWGRLYEG 529
+ + VK + PIC+P + G++ L +
Sbjct: 323 KLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQ 368
Score = 76.2 bits (187), Expect = 1e-14
Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 562 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
+ + + PW ++++ + C AL ++ W +TAAHC D
Sbjct: 223 GNMSANASDQERTPWHVTIKPKSQ----ETCRGALISDQWVLTAAHCFRD 268
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP:
b.47.1.2
Length = 235
Score = 130 bits (330), Expect = 1e-34
Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 24/155 (15%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IVGG K PWQ+++ + CG L + +W +TAAHC ++ + LG
Sbjct: 1 IVGGYKCEKNSQPWQVAVINE------YLCGGVLIDPSWVITAAHCY----SNNYQVLLG 50
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRT-----------FEYDLALLRFYEPVKFQP 499
++L +E Q R V+ HP + P DL LL EP
Sbjct: 51 RNNLFKDEPF--AQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLHLSEPADITG 108
Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRS 534
+ I +P + VG++ +GWG S
Sbjct: 109 GVKVIDLPTKEPK-VGSTCLASGWGSTNPSEMVVS 142
Score = 68.4 bits (168), Expect = 5e-13
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
IVGG K PWQ+++ + CG L + +W +TAAHC + +
Sbjct: 1 IVGGYKCEKNSQPWQVAVINE------YLCGGVLIDPSWVITAAHCYSNNY 45
Score = 50.3 bits (121), Expect = 5e-07
Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+ + LQ V++ +++N C Y+ +++ ++ +CAG +G D+C
Sbjct: 138 EMVVSHDLQCVNIHLLSNEKCIETYK-----DNVTDVMLCAGEMEGGKDTC 183
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP:
b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Length = 497
Score = 136 bits (345), Expect = 2e-34
Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 27/179 (15%)
Query: 362 DESNEIESQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCG 421
+ ++ Q I+ S +CG + + K PWQ + S C
Sbjct: 192 ECLEDVFYQMIDESQSLSLCGMV------WEHRKGTDYHKQPWQAKISVIRPSKGHESCM 245
Query: 422 AALFNENWAVTAAHCVE-DVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFD-- 478
A+ +E + +TAAHC D + + +G ++ +++V HP ++
Sbjct: 246 GAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEK----------RDLEIEVVLFHPNYNIN 295
Query: 479 -------PRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
P ++YD+AL++ +K+ I PIC+P + T + E
Sbjct: 296 GKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEE 354
Score = 71.5 bits (175), Expect = 3e-13
Identities = 13/50 (26%), Positives = 20/50 (40%)
Query: 562 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
+ + K PWQ + S C A+ +E + +TAAHC
Sbjct: 214 VWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTV 263
Score = 42.6 bits (100), Expect = 3e-04
Identities = 11/63 (17%), Positives = 19/63 (30%), Gaps = 12/63 (19%)
Query: 638 GPLPSVLQEVSVPVINN---SLCETMYRAAGFIEHIPEI-------FICAGWRKGSF--D 685
L V + N CE + A + + +I F+C G +
Sbjct: 367 SEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPN 426
Query: 686 SCE 688
+C
Sbjct: 427 TCR 429
>2zch_P Prostate-specific antigen; human PSA, kallikrein related
peptidases, antibodies, prostate cancer, glycoprotein,
hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens}
PDB: 2zck_P* 2zcl_P* 3qum_P*
Length = 237
Score = 129 bits (327), Expect = 3e-34
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 22/155 (14%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IVGG + PWQ+ + R CG L + W +TAAHC+ + ++ LG
Sbjct: 1 IVGGWECEKHSQPWQVLVASRGR----AVCGGVLVHPQWVLTAAHCI----RNKSVILLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRTF-----------EYDLALLRFYEPVKFQP 499
H L E+ Q +V HP +D +DL LLR EP +
Sbjct: 53 RHSLFHPEDT--GQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLSEPAELTD 110
Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRS 534
+ + +P + +GT+ + +GWG + F
Sbjct: 111 AVKVMDLPTQEPA-LGTTCYASGWGSIEPEEFLTP 144
Score = 68.4 bits (168), Expect = 5e-13
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
IVGG + PWQ+ + R CG L + W +TAAHC+ +
Sbjct: 1 IVGGWECEKHSQPWQVLVASRGR----AVCGGVLVHPQWVLTAAHCIRNKS 47
Score = 49.5 bits (119), Expect = 9e-07
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+ P LQ V + VI+N +C ++ + + + +CAG G +C
Sbjct: 140 EFLTPKKLQCVDLHVISNDVCAQVHP-----QKVTKFMLCAGRWTGGKSTC 185
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET:
NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Length = 237
Score = 129 bits (326), Expect = 4e-34
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 22/155 (14%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
+VGG PWQ+++ H CG L + NW +TAAHC + LG
Sbjct: 1 VVGGFNCEKNSQPWQVAVYYQKE----HICGGVLLDRNWVLTAAHCY----VDQYEVWLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRT-----------FEYDLALLRFYEPVKFQP 499
++ L EE Q R V HP F+ F DL LLR +P
Sbjct: 53 KNKLFQEEPS--AQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITD 110
Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRS 534
+ PI +P + G+ +GWG + R+++
Sbjct: 111 VVKPIALPTKEPK-PGSKCLASGWGSITPTRWQKP 144
Score = 68.8 bits (169), Expect = 3e-13
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
+VGG PWQ+++ H CG L + NW +TAAHC D +
Sbjct: 1 VVGGFNCEKNSQPWQVAVYYQKE----HICGGVLLDRNWVLTAAHCYVDQY 47
Score = 51.1 bits (123), Expect = 3e-07
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
P LQ V + ++ N C +Y + + ++ +CAG G D+C
Sbjct: 140 RWQKPDDLQCVFITLLPNENCAKVYL-----QKVTDVMLCAGEMGGGKDTC 185
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase;
1.42A {Equus caballus} SCOP: b.47.1.2
Length = 237
Score = 127 bits (321), Expect = 2e-33
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 22/155 (14%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+GG + PWQ+++ +CG L + W +TAAHC+ D + LG
Sbjct: 1 IIGGWECEKHSKPWQVAVYHQGH----FQCGGVLVHPQWVLTAAHCM----SDDYQIWLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPR-----------TFEYDLALLRFYEPVKFQP 499
H+LS +E+ Q +V PQFD +DL LLR +P +
Sbjct: 53 RHNLSKDEDT--AQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLAQPARITD 110
Query: 500 NIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRS 534
+ + +P + +G++ + +GWG + R S
Sbjct: 111 AVKILDLPTQEPK-LGSTCYTSGWGLISTFTNRGS 144
Score = 65.3 bits (160), Expect = 5e-12
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
I+GG + PWQ+++ +CG L + W +TAAHC+ D +
Sbjct: 1 IIGGWECEKHSKPWQVAVYHQGH----FQCGGVLVHPQWVLTAAHCMSDDY 47
Score = 50.3 bits (121), Expect = 5e-07
Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
LQ V + + +N C Y E + E +CA R S C
Sbjct: 140 TNRGSGTLQCVELRLQSNEKCARAYP-----EKMTEFVLCATHRDDSGSIC 185
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG;
1.70A {Homo sapiens}
Length = 238
Score = 125 bits (317), Expect = 7e-33
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 23/156 (14%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
IVGG + PWQ +L + +CG L + W +TAAHC+ + L LG
Sbjct: 1 IVGGWECEQHSQPWQAALYHFST----FQCGGILVHRQWVLTAAHCI----SDNYQLWLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDPRT-----------FEYDLALLRFYEPV-KFQ 498
H+L +E Q V HP F+ + +DL LLR EP
Sbjct: 53 RHNLFDDENT--AQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLTEPADTIT 110
Query: 499 PNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRS 534
+ + +P ++ VG++ +GWG + F
Sbjct: 111 DAVKVVELPTEEPE-VGSTCLASGWGSIEPENFSFP 145
Score = 67.6 bits (166), Expect = 7e-13
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
IVGG + PWQ +L + +CG L + W +TAAHC+ D +
Sbjct: 1 IVGGWECEQHSQPWQAALYHFST----FQCGGILVHRQWVLTAAHCISDNY 47
Score = 51.1 bits (123), Expect = 3e-07
Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
+ P LQ V + ++ N C+ + + + + +C G +G D+C
Sbjct: 141 NFSFPDDLQCVDLKILPNDECKKAHV-----QKVTDFMLCVGHLEGGKDTC 186
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain,
complement SYST convertase, complement alternate
pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I*
3hs0_D* 2ok5_A* 2xwb_F*
Length = 741
Score = 127 bits (319), Expect = 2e-30
Identities = 36/198 (18%), Positives = 73/198 (36%), Gaps = 32/198 (16%)
Query: 361 IDESNEIESQGINMSNYKEVCGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKC 420
++ ++ Q I+ S +CG + + K PWQ + S C
Sbjct: 433 MENLEDVFYQMIDESQSLSLCGMV------WEHRKGTDYHKQPWQAKISVIRPSKGHESC 486
Query: 421 GAALFNENWAVTAAHCVE-DVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFD- 478
A+ +E + +TAAHC D + + +G ++ +++V HP ++
Sbjct: 487 MGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEK----------RDLEIEVVLFHPNYNI 536
Query: 479 --------PRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNF------VGTSAHVTGWG 524
P ++YD+AL++ +K+ I PIC+P + T+
Sbjct: 537 NGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEE 596
Query: 525 RLYEGRFRRSYGHPATRQ 542
L + + ++
Sbjct: 597 LLPAQDIKALFVSEEEKK 614
Score = 64.7 bits (157), Expect = 6e-11
Identities = 13/50 (26%), Positives = 20/50 (40%)
Query: 562 RIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
+ + K PWQ + S C A+ +E + +TAAHC
Sbjct: 456 VWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTV 505
Score = 38.9 bits (90), Expect = 0.005
Identities = 13/69 (18%), Positives = 21/69 (30%), Gaps = 12/69 (17%)
Query: 631 WKMALADGPLPSVLQEVSVPVINN---SLCETMYRAAGFIEHIPEI-------FICAGWR 680
AL L V + N CE + A + + +I F+C G
Sbjct: 602 DIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGV 661
Query: 681 KGSF--DSC 687
++C
Sbjct: 662 SPYADPNTC 670
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL
SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Length = 791
Score = 113 bits (285), Expect = 2e-26
Identities = 48/151 (31%), Positives = 62/151 (41%), Gaps = 13/151 (8%)
Query: 381 CGRRLFPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV 440
R+VGG A WPWQ+SLR +H CG L + W +TAAHC+E
Sbjct: 552 QVEPKKCPGRVVGGCVAHPHSWPWQVSLRTR---FGMHFCGGTLISPEWVLTAAHCLEKS 608
Query: 441 P-PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQP 499
P PS + LG H E QE V + P D+ALL+ P
Sbjct: 609 PRPSSYKVILGAHQEVNLEP--HVQEIEVSRLFLEPTR------KDIALLKLSSPAVITD 660
Query: 500 NIIPICVPEDDTNF-VGTSAHVTGWGRLYEG 529
+IP C+P + T +TGWG
Sbjct: 661 KVIPACLPSPNYVVADRTECFITGWGETQGT 691
Score = 54.3 bits (130), Expect = 1e-07
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 558 FPSSRIVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVED 611
R+VGG A WPWQ+SLR +H CG L + W +TAAHC+E
Sbjct: 557 KCPGRVVGGCVAHPHSWPWQVSLRTR---FGMHFCGGTLISPEWVLTAAHCLEK 607
Score = 47.4 bits (112), Expect = 2e-05
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Query: 634 ALADGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSCE 688
+L+E +PVI N +C G + +CAG G DSC+
Sbjct: 687 ETQGTFGAGLLKEAQLPVIENKVCNRYEFLNG---RVQSTELCAGHLAGGTDSCQ 738
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_A 1hia_A
Length = 80
Score = 89.5 bits (223), Expect = 5e-22
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 391 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLG 450
I+GG + PWQ+++ + +CG L N W +TAAHC + + LG
Sbjct: 1 IIGGRECEKNSHPWQVAIYHYSS----FQCGGVLVNPKWVLTAAHCK----NDNYEVWLG 52
Query: 451 EHDLSTEEEPYGYQERRVQIVASHPQFDP 479
H+L E Q V HP F+
Sbjct: 53 RHNLFENENT--AQFFGVTADFPHPGFNL 79
Score = 64.5 bits (158), Expect = 3e-13
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 563 IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLW 613
I+GG + PWQ+++ + +CG L N W +TAAHC D +
Sbjct: 1 IIGGRECEKNSHPWQVAIYHYSS----FQCGGVLVNPKWVLTAAHCKNDNY 47
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2
PDB: 2kai_B 1hia_B
Length = 152
Score = 62.2 bits (152), Expect = 1e-11
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 478 DPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSY 535
D + + +DL LLR P K + + +P + G++ +GWG + G +
Sbjct: 2 DGKDYSHDLMLLRLQSPAKITDAVKVLELPTQEPEL-GSTCEASGWGSIEPGPDDFEF 58
Score = 50.2 bits (121), Expect = 2e-07
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 637 DGPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
D P +Q V + ++ N+ C + + + E +CAG+ G D+C
Sbjct: 55 DFEFPDEIQCVQLTLLQNTFCADAHP-----DKVTESMLCAGYLPGGKDTC 100
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus
intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Length = 215
Score = 58.5 bits (141), Expect = 9e-10
Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 14/130 (10%)
Query: 400 GKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDV----PPSDLLLRLGEHDLS 455
P+ C L N +T HCV + + + G +D
Sbjct: 15 RVAPYNSIAYITFGG---SSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMND-- 69
Query: 456 TEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVG 515
G + + +YD A+++ + I TN G
Sbjct: 70 -STAVNG-SANMTEFYVPSGYINTGASQYDFAVIKTDTNIGNTVGYRSI---RQVTNLTG 124
Query: 516 TSAHVTGWGR 525
T+ ++G+
Sbjct: 125 TTIKISGYPG 134
Score = 39.6 bits (92), Expect = 0.002
Identities = 9/47 (19%), Positives = 13/47 (27%), Gaps = 3/47 (6%)
Query: 572 GKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDLWSQIIP 618
P+ C L N +T HCV + S+
Sbjct: 15 RVAPYNSIAYITFGG---SSCTGTLIAPNKILTNGHCVYNTASRSYS 58
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos
taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C*
1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C
1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Length = 97
Score = 51.0 bits (123), Expect = 3e-08
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 638 GPLPSVLQEVSVPVINNSLCETMYRAAGFIEHIPEIFICAGWRKGSFDSC 687
P LQ+ S+P+++N+ C+ + I + ICAG SC
Sbjct: 1 ANTPDRLQQASLPLLSNTNCKKYWGTK-----IKDAMICAG--ASGVSSC 43
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 53.1 bits (127), Expect = 3e-07
Identities = 98/632 (15%), Positives = 162/632 (25%), Gaps = 228/632 (36%)
Query: 5 GRLEFIVILYPK--HAFCDEERERNFAMYKNDTSPIRNVTTTVVTTKPYPETTTTTEKTE 62
G LE V+L P + +E+ F K PE T +
Sbjct: 14 GSLEH-VLLVPTASFFIASQLQEQ-F-------------------NKILPEPTEGFAADD 52
Query: 63 PSPSTVYETSS------MSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNY--KEDV 114
P+T E S P V E E+ Y D+
Sbjct: 53 E-PTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCL----TEFEN------CYLEGNDI 101
Query: 115 TTTVVTTKPYPETTITTEKTEPSPSTVYETSSSGRNIRHLPCVSRRTGETGLCMFAFSCA 174
+TT+ K + + + R + P + + L F
Sbjct: 102 HALAAKLLQENDTTLVKTKE------LIKNYITARIMAKRP--FDKKSNSAL----FRAV 149
Query: 175 KANGTHLGTCIDRFY--FGSCCKIAGETDV---------DISEP-INNFIHN-TNHIDEH 221
+ FG G TD + + I + E
Sbjct: 150 GEGNA-------QLVAIFGG----QGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSEL 198
Query: 222 SSSTIEEETNMIGGGTAY----GTSTTPSL-------VTWTTVDEIPVI----------- 259
+T++ E G S TP ++ P+I
Sbjct: 199 IRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISC------PLIGVIQLAHYVVT 252
Query: 260 ------PPDRTRPPPLVTTIKAPPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVV 313
P R L V + + T+SW SF +V +
Sbjct: 253 AKLLGFTPGELRSY-LKGATGHSQGLVTAVAIAETDSWE-------SF---FVSVRKAIT 301
Query: 314 --------TTKPYPETTTTTEKTEPSPSTVYETSSMSPSSPKPSP-------TTSTVSTT 358
+ YP T+ PS + S+ + PSP T V
Sbjct: 302 VLFFIGVRCYEAYPNTS-------LPPSIL--EDSLENNEGVPSPMLSISNLTQEQV--Q 350
Query: 359 AFIDESNEI--ESQGINMSNYKEVCGRRLFPSSRIVGG--------------EKATFGKW 402
+++++N + + +S V G + +V G KA G
Sbjct: 351 DYVNKTNSHLPAGKQVEISL---VNGAKNL----VVSGPPQSLYGLNLTLRKAKAPSGLD 403
Query: 403 PWQISLRQ---WIRSTYLHKCGAALFNENWAVTAA-HCVEDVPPSDLL---LRLGEHDLS 455
+I + + +L V + H S LL L DL
Sbjct: 404 QSRIPFSERKLKFSNRFL------------PVASPFH-------SHLLVPASDLINKDLV 444
Query: 456 TEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVKFQPNIIP-ICV-P---EDD 510
+ ++ ++ + + D R ++ I+ I P E
Sbjct: 445 KNNVSFNAKDIQIPVYDTFDGSDLRVLSGSIS-----------ERIVDCIIRLPVKWETT 493
Query: 511 TNFVGTSAHV--------TGWGRLY----EGR 530
T F T H+ +G G L +G
Sbjct: 494 TQFKAT--HILDFGPGGASGLGVLTHRNKDGT 523
Score = 33.9 bits (77), Expect = 0.23
Identities = 39/279 (13%), Positives = 89/279 (31%), Gaps = 87/279 (31%)
Query: 404 WQISLRQWIRSTYLHKCGAALFNENW-AVTAAHCVEDVPPS--DLLLR-LGEHDLSTEEE 459
+ + ++ L + FN+ T +D P + +L+ + LG + +S+ E
Sbjct: 20 LLVPTASFFIASQLQEQ----FNKILPEPTEGFAADDEPTTPAELVGKFLG-Y-VSSLVE 73
Query: 460 PYGYQERRVQIV-ASHPQFDPRTFEYDLALLRFYEPVKFQPNI--IPICVPEDDTNFVGT 516
P + Q++ +F+ + L +I + + +++ +
Sbjct: 74 P-SKVGQFDQVLNLCLTEFE-NCY------LE-------GNDIHALAAKLLQENDTTLVK 118
Query: 517 SAHVTGWGRLYEGRFRRSY-------GHPATRQEMATCWNHFLGNRILFPSSRIVGGEK- 568
+ + ++Y P ++ N LF + G +
Sbjct: 119 TKELI-----------KNYITARIMAKRPFDKKS----------NSALFRAVGE-GNAQL 156
Query: 569 -ATFG-----KWPWQISLRQWIRSTY-------LHKCGAALFNENWAVTAAHCVEDLWSQ 615
A FG ++ LR + TY + L + E +++Q
Sbjct: 157 VAIFGGQGNTDDYFE-ELRD-LYQTYHVLVGDLIKFSAETLSEL---IRTTLDAEKVFTQ 211
Query: 616 IIPIIQNCRRRESNLWKMALADGPLPSVLQ--EVSVPVI 652
+ I++ W ++ P L +S P+I
Sbjct: 212 GLNILE---------WLENPSNTPDKDYLLSIPISCPLI 241
Score = 31.6 bits (71), Expect = 1.2
Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 53/133 (39%)
Query: 142 YETSSSGRNI-----RHLPCVSRRTGETGLCMFAFS---CAKANGTHLGTCIDRFYFG-- 191
Y+TS + +++ H +T + FS N +L +FG
Sbjct: 1636 YKTSKAAQDVWNRADNHF-------KDT----YGFSILDIVINNPVNL-----TIHFGGE 1679
Query: 192 SCCKI-------AGETDVD---ISEPINNFIHNTNHIDEHSSSTI----EEETNMIGGGT 237
+I ET VD +E I I+EHS+S + + T
Sbjct: 1680 KGKRIRENYSAMIFETIVDGKLKTEKIF------KEINEHSTSYTFRSEKGLLSA----T 1729
Query: 238 AYGTSTTPSLVTW 250
+ T P+L
Sbjct: 1730 QF---TQPALTLM 1739
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 49.1 bits (116), Expect = 4e-06
Identities = 76/522 (14%), Positives = 140/522 (26%), Gaps = 162/522 (31%)
Query: 213 HNTNHID------EHSSSTIEE--ETNMIGGGTAYGTSTTP-SLVTWTTVDEIPVIPPDR 263
H+ +H+D ++ I E + P S+++ +D I +
Sbjct: 2 HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 264 TRPPPLVTTIKAPPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVVTTKPYP--ET 321
+ L T+ + + + +V+ L + N Y +
Sbjct: 62 SGTLRLFWTLLSKQEEMV-------QKFVEEVL--------RIN----------YKFLMS 96
Query: 322 TTTTEKTEPSPST---VYETSSMSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYK 378
TE+ +PS T + + + + + VS + ++
Sbjct: 97 PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAK--YNVSR---LQPYLKLRQ--------- 142
Query: 379 EVCGRRLFPSSRIV----GGEKATFGKWPWQISL-RQWIRSTYLHKCGAALFNEN--WAV 431
L P+ ++ G GK + S + + W +
Sbjct: 143 --ALLELRPAKNVLIDGVLG----SGKT----WVALDVCLSYKVQCK----MDFKIFW-L 187
Query: 432 TAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRF 491
+C P +L L L + +P + R + H A LR
Sbjct: 188 NLKNCNS---PETVLEML--QKLLYQIDP-NWTSR-----SDHSSNIKLRIHSIQAELRR 236
Query: 492 YEPVKFQPN---IIPICVPEDDTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCW 548
K N ++ + V A W
Sbjct: 237 LLKSKPYENCLLVL------LN---------V--QN--------------------AKAW 259
Query: 549 NHF-LGNRILFPSSR------IVGGEKATFGKWPWQISLRQWIRSTYLHKCGAALFNENW 601
N F L +IL ++R + T ISL T +L +
Sbjct: 260 NAFNLSCKILL-TTRFKQVTDFLSAATTT------HISLDH-HSMTLTPDEVKSLL-LKY 310
Query: 602 AVTAAHCVEDLWSQ---IIPI--------IQNCRRRESNLWKMALADGPLPSVLQEVSVP 650
+DL + P I++ N WK D L +++ E S+
Sbjct: 311 LDCR---PQDLPREVLTTNPRRLSIIAESIRDGLATWDN-WKHVNCD-KLTTII-ESSLN 364
Query: 651 VINNSLCETMYRAAG-FIE--HIPEIFICAGWRKGSFDSCEE 689
V+ + M+ F HIP I + W
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMV 406
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A
{Nesterenkonia abyssinica}
Length = 218
Score = 36.6 bits (84), Expect = 0.017
Identities = 20/140 (14%), Positives = 37/140 (26%), Gaps = 22/140 (15%)
Query: 418 HKCGAAL---FNENWAVTAAHCVEDVPPSDLLLRL----GEHDLSTEEEPYGYQERRVQI 470
C A + N++ TA HC+ D E +G +
Sbjct: 21 FVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDY---GESEHGV--WAAEE 75
Query: 471 VASHPQF-DPRTFEYDLALLRFYEPVKFQPNIIPICVPEDDTNFVGTSAHVTGWGRLYEG 529
+ + ++ + FE+D A N + + +G
Sbjct: 76 LVTSAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFN-QPRGQYYSAYG----- 129
Query: 530 RFRRSYGHPATRQEMATCWN 549
P QE+ +C
Sbjct: 130 ---YPAAAPFNGQELHSCHG 146
Score = 30.8 bits (69), Expect = 1.3
Identities = 8/25 (32%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
Query: 590 HKCGAAL---FNENWAVTAAHCVED 611
C A + N++ TA HC+ D
Sbjct: 21 FVCSANIVASANQSTVATAGHCLHD 45
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase;
2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Length = 246
Score = 33.4 bits (76), Expect = 0.19
Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 8/104 (7%)
Query: 424 LFNENWAVTAAHCVEDVP--PSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDPRT 481
L +N VT H + PS+++ + + + E + + A + P
Sbjct: 54 LIGKNTIVTNYHVAREAAKNPSNIIFTPAQ---NRDAEKNEFPTPYGKFEAEEIKESPYG 110
Query: 482 FEYDLALLRFYEPVKFQP---NIIPICVPEDDTNFVGTSAHVTG 522
DLA+++ K + I P +P+ G + G
Sbjct: 111 QGLDLAIIKLKPNEKGESAGDLIQPANIPDHIDIAKGDKYSLLG 154
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A
{Staphylococcus aureus} SCOP: b.47.1.1
Length = 268
Score = 31.9 bits (72), Expect = 0.53
Identities = 17/106 (16%), Positives = 37/106 (34%), Gaps = 11/106 (10%)
Query: 420 CGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDP 479
+ ++ +T H V+ L+ ++ + P G + Q
Sbjct: 36 ASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGG--------FTAEQITK 87
Query: 480 RTFEYDLALLRFYEPVKFQP---NIIPICVPEDDTNFVGTSAHVTG 522
+ E DLA+++F + + + P + + V + VTG
Sbjct: 88 YSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTG 133
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor,
endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 213
Score = 31.6 bits (70), Expect = 0.70
Identities = 21/113 (18%), Positives = 32/113 (28%)
Query: 242 STTPSLVTWTTVDEIPVIPPDRTRPPPLVTTIKAPPSTVASPVTSSTESWVQISLTTLSF 301
+ TP + + P T P K PP T S E + L+
Sbjct: 5 AATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFED 64
Query: 302 PPPQQNVTTTVVTTKPYPETTTTTEKTEPSPSTVYETSSMSPSSPKPSPTTST 354
+ TT E T+ + +S + SS P+ T
Sbjct: 65 TFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVET 117
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme,
hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1
PDB: 1qy6_A
Length = 274
Score = 30.9 bits (69), Expect = 1.3
Identities = 15/107 (14%), Positives = 34/107 (31%), Gaps = 11/107 (10%)
Query: 420 CGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHDLSTEEEPYGYQERRVQIVASHPQFDP 479
+ ++ +T H V+ G+ Q+ + Q
Sbjct: 36 ASGVVVGKDTLLTNKHVVDATH--------GDPHALKAFPSAINQDNYPNGGFTAEQITK 87
Query: 480 RTFEYDLALLRFYEPVKFQP---NIIPICVPEDDTNFVGTSAHVTGW 523
+ E DLA+++F + + + P + + + VTG+
Sbjct: 88 YSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGY 134
>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription,
mRNA, multiprotein complex; HET: UTP; 2.30A
{Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A
1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A*
1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A*
1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ...
Length = 1733
Score = 31.2 bits (70), Expect = 1.4
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 276 PPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVVTTKPYPETTTTTEKTEPSPSTV 335
P + SP S T S T+ ++ P + + T + P + + T + S
Sbjct: 1638 PSYSPTSPSYSPTSP--SYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPN 1695
Query: 336 YETSS--MSPSSPKPSPTTSTVSTTA 359
Y +S SP+SP SP + S
Sbjct: 1696 YSPTSPSYSPTSPGYSPGSPAYSPKQ 1721
Score = 29.7 bits (66), Expect = 4.1
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 276 PPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVVTTKPYPETTTTTEKTEP-SPST 334
P + SP S T + + S P + T+ P + T+ P SPS
Sbjct: 1631 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS--------PSYSPTSPSYSPTSPSY 1682
Query: 335 VYETSSMSPSSPKPSPTTSTVSTTA 359
+ S SP+SP SPT+ + S T+
Sbjct: 1683 SPTSPSYSPTSPNYSPTSPSYSPTS 1707
Score = 29.7 bits (66), Expect = 4.2
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 18/100 (18%)
Query: 275 APPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTT----VVTTKPYPETTTTTEKTEP 330
+P + SP S T S T+ S+ P + + T T+ Y T+ + T P
Sbjct: 1539 SPGFSPTSPTYSPTSP--AYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1596
Query: 331 ------------SPSTVYETSSMSPSSPKPSPTTSTVSTT 358
SPS + S SP+SP SPT+ + S T
Sbjct: 1597 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1636
Score = 29.3 bits (65), Expect = 6.3
Identities = 31/142 (21%), Positives = 46/142 (32%), Gaps = 9/142 (6%)
Query: 227 EEETNMIGGGTAYGTSTTPSLVTWTTVDEIPVIPPDRTRPPPLVTTIKAPPSTVASPVTS 286
E E GG T Y + DE+ P + + +
Sbjct: 1461 EIEDGQDGGVTPYSNESGLVNADLDVKDELMFSPLVDSGSNDAMAGGFTAYGGADYGEAT 1520
Query: 287 STESWVQISLTTLSFPPPQQNVTTTVVTTKPY-PETTTTTEKTEP--------SPSTVYE 337
S + T+ F + T T P P + T+ P SPS
Sbjct: 1521 SPFGAYGEAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPT 1580
Query: 338 TSSMSPSSPKPSPTTSTVSTTA 359
+ S SP+SP SPT+ + S T+
Sbjct: 1581 SPSYSPTSPSYSPTSPSYSPTS 1602
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II,
amidohydrolase, sargasso SEA, enviro sample, structural
genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Length = 492
Score = 30.7 bits (70), Expect = 2.0
Identities = 10/58 (17%), Positives = 19/58 (32%), Gaps = 16/58 (27%)
Query: 396 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHD 453
+ +GK P + + + V AH V+ V ++ L L +
Sbjct: 260 YSMYGKSPVA----------FCGEHD--WLGSD--VWYAHLVK-VDADEIAL-LAQTG 301
Score = 30.0 bits (68), Expect = 3.4
Identities = 7/42 (16%), Positives = 12/42 (28%), Gaps = 14/42 (33%)
Query: 568 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
+ +GK P + + + V AH V
Sbjct: 260 YSMYGKSPVA----------FCGEHD--WLGSD--VWYAHLV 287
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 29.1 bits (64), Expect = 3.2
Identities = 4/21 (19%), Positives = 12/21 (57%)
Query: 25 ERNFAMYKNDTSPIRNVTTTV 45
+ + +Y +D++P + T+
Sbjct: 26 QASLKLYADDSAPALAIKATM 46
>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane
fusion, viral P glycoprotein B, HSV-1, membrane; HET:
NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A*
3nwd_A*
Length = 703
Score = 29.5 bits (66), Expect = 4.4
Identities = 15/108 (13%), Positives = 30/108 (27%), Gaps = 20/108 (18%)
Query: 275 APPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVVTTKPYPETTTTTEKTEPSPST 334
A P++ +P Q T P T +P +
Sbjct: 3 AAPTSPGTPGV----------------AAATQAANGGPATPAPPALGAAPTGDPKPKKNK 46
Query: 335 VYETSSMSPSSPKPSPTTSTVSTTAFIDESNEIESQGINMSNYKEVCG 382
+ + +P P T + +I+++ + + Y VC
Sbjct: 47 --KPKNPTPPRPAGDNATVAAGHATLREHLRDIKAENTDANFY--VCP 90
>2wzl_A Phosphoprotein; viral protein, rabies, virion, chaperone,
nucleoprotein, RNA replication; 2.10A {Mokola virus}
Length = 303
Score = 29.1 bits (65), Expect = 4.6
Identities = 6/66 (9%), Positives = 23/66 (34%), Gaps = 2/66 (3%)
Query: 294 ISLTTLSFP-PPQQNVTTTVVTTKPYPETTTTTEKTEPSPSTVYETSSMSPSSPKPSPTT 352
+ + +++ + + T+P ++ E ++++ + +P
Sbjct: 126 KGYVSTNIMTSGERDTKSIQIQTEPTASVSSGNES-RHDSESMHDPNDKKDHTPDHDVVP 184
Query: 353 STVSTT 358
S+T
Sbjct: 185 DIESST 190
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A
{Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Length = 268
Score = 29.3 bits (64), Expect = 4.6
Identities = 21/177 (11%), Positives = 37/177 (20%), Gaps = 14/177 (7%)
Query: 402 WPWQISLRQWIRSTYLHKCGAALFN------ENWAVTAAHCVEDVPPSDLLLRLGEHDLS 455
I + C +L N + + +TA HC + + + + +
Sbjct: 18 RRDIIRAVGAYSKSGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQN 77
Query: 456 TEEEPYGYQERRVQIVASHPQ------FDPRTFEYDLALLRFYEPVKFQPNIIPICVPED 509
+ S Q D LL N+ D
Sbjct: 78 STCRAPNTPASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAANPAFNLFW--AGWD 135
Query: 510 DTNFVGTSAHVTGWGRLYEGRFRRSYGHPATRQEMATCWNHFLGNRILFPSSRIVGG 566
+ A + E R S + L + G
Sbjct: 136 RRDQNYPGAIAIHHPNVAEKRISNSTSPTSFVAWGGGAGTTHLNVQWQPSGGVTEPG 192
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics,
NYSGXRC, target 9236E, PSI-2, protein structure
initiative; 2.20A {Unidentified} PDB: 3hpa_A
Length = 479
Score = 29.1 bits (66), Expect = 5.2
Identities = 11/58 (18%), Positives = 18/58 (31%), Gaps = 16/58 (27%)
Query: 396 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCVEDVPPSDLLLRLGEHD 453
+ FG P + Y G + V AHCV+ + + + L
Sbjct: 271 REKFGMTPAE----------YAEDLG--WVGHD--VWHAHCVQ-LDDAGIGL-FARTG 312
Score = 28.7 bits (65), Expect = 7.4
Identities = 10/42 (23%), Positives = 13/42 (30%), Gaps = 14/42 (33%)
Query: 568 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
+ FG P + Y G + V AHCV
Sbjct: 271 REKFGMTPAE----------YAEDLG--WVGHD--VWHAHCV 298
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription,
multi-protein complex, DNA- binding, magnesium; 3.65A
{Schizosaccharomyces pombe}
Length = 1752
Score = 29.3 bits (65), Expect = 5.7
Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 5/125 (4%)
Query: 234 GGGTAYGTSTTPSLVTWTTVDEIPVIPPDRTRPPPLVTTIKAPPSTVASPVTSSTESWVQ 293
GG L+ + + P + ++ S SP + +
Sbjct: 1511 GGSEGREGFGDYGLLGAASPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYSTSPA 1570
Query: 294 ISLTTLSFPPPQQNVTTTVVTTKPYPETTTTTEKTEPSPSTVYETSSMSPSSPKPSPTTS 353
++ S+ P + + T + P + + T SPS + S SP+SP SPT+
Sbjct: 1571 YMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPT-----SPSYSATSPSYSPTSPSYSPTSP 1625
Query: 354 TVSTT 358
+ S T
Sbjct: 1626 SYSPT 1630
Score = 28.9 bits (64), Expect = 8.4
Identities = 22/85 (25%), Positives = 37/85 (43%)
Query: 275 APPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVVTTKPYPETTTTTEKTEPSPST 334
+P + SP S T + + S P + T+ + + T+ + SPS
Sbjct: 1638 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1697
Query: 335 VYETSSMSPSSPKPSPTTSTVSTTA 359
+ S SP+SP SPT+ + S T+
Sbjct: 1698 SPTSPSYSPTSPSYSPTSPSYSPTS 1722
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface
adhesin WALL, peptidoglycan-anchor, cell adhesion; HET:
PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Length = 497
Score = 29.1 bits (63), Expect = 5.8
Identities = 19/122 (15%), Positives = 28/122 (22%), Gaps = 21/122 (17%)
Query: 235 GGTAYGTSTTPSLVTWTTVDEIPVIPPDRTRPPPLVTTIKAPPSTVASPVTSSTESWVQI 294
G Y T S V ++PV+P + + +
Sbjct: 393 GPNNYVTVGATSATNVMPVSDMPVVPGKDNTDGKKPNIWYSLNGKIRAVNV--------- 443
Query: 295 SLTTLSFPPPQQNVTTTVVTTKPYPETTTTTEKTEPSPSTVYETSSMSPSSPKPSPTTST 354
P+ KP T T E +P + P P PT
Sbjct: 444 ---------PKVTKEKPTPPVKPTAPTKPTYETEKPLKPAPVAPN--YEKEPTP-PTRLE 491
Query: 355 VS 356
Sbjct: 492 HH 493
Score = 29.1 bits (63), Expect = 6.1
Identities = 15/140 (10%), Positives = 28/140 (20%), Gaps = 2/140 (1%)
Query: 215 TNHIDEHSSSTIEEETNMIGGGTAYGTSTTPSLVTWTTVDEIPVIPPDRTRPPPLVTTIK 274
++ GG + + W + D
Sbjct: 339 GEKNGMIYATDTLNFKQGEGGSRWTMYKNSQAGSGWDSSDAPNSWYGAGAIKMSGPNNYV 398
Query: 275 APPSTVASPVTSSTESWVQISLTTLSFPPPQQNVTTTVVTTKPYPETTTTTEKTEPSPST 334
+T A+ V ++ V P + T + T P T
Sbjct: 399 TVGATSATNVMPVSDMPVVPGKDNTDGKKPNIWYSLNGKIRAVNVPKVTKEKPTPPVKPT 458
Query: 335 VYETSSMSPSSPKPSPTTST 354
+ + KP
Sbjct: 459 APTK--PTYETEKPLKPAPV 476
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO
PSI-biology, NEW YORK structural genomics research
consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Length = 451
Score = 28.7 bits (65), Expect = 8.0
Identities = 8/42 (19%), Positives = 10/42 (23%), Gaps = 14/42 (33%)
Query: 396 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 437
G+ P LH+ G L A H
Sbjct: 233 MERNGERPLA----------RLHRLG--LLGPR--FQAVHMT 260
Score = 28.7 bits (65), Expect = 8.0
Identities = 8/42 (19%), Positives = 10/42 (23%), Gaps = 14/42 (33%)
Query: 568 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
G+ P LH+ G L A H
Sbjct: 233 MERNGERPLA----------RLHRLG--LLGPR--FQAVHMT 260
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK
structural genomics research consortium; 1.55A
{Xanthomonas campestris PV}
Length = 472
Score = 28.3 bits (64), Expect = 9.2
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 14/42 (33%)
Query: 396 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 437
A +G+ P L + G L N+ + A H
Sbjct: 240 VAQYGQRPLA----------RLDRLG--LVNDR--LIAVHMT 267
Score = 28.3 bits (64), Expect = 9.2
Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 14/42 (33%)
Query: 568 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
A +G+ P L + G L N+ + A H
Sbjct: 240 VAQYGQRPLA----------RLDRLG--LVNDR--LIAVHMT 267
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural
genomics, PSI-biology; HET: MSE MTA; 1.80A
{Chromobacterium violaceum} PDB: 4f0s_A*
Length = 447
Score = 28.3 bits (64), Expect = 9.4
Identities = 9/42 (21%), Positives = 13/42 (30%), Gaps = 14/42 (33%)
Query: 396 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 437
G+ P L + G L + + AAH V
Sbjct: 231 VKEHGQRPLA----------RLQRLG--LLSPR--LVAAHMV 258
Score = 28.3 bits (64), Expect = 9.4
Identities = 9/42 (21%), Positives = 13/42 (30%), Gaps = 14/42 (33%)
Query: 568 KATFGKWPWQISLRQWIRSTYLHKCGAALFNENWAVTAAHCV 609
G+ P L + G L + + AAH V
Sbjct: 231 VKEHGQRPLA----------RLQRLG--LLSPR--LVAAHMV 258
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.315 0.130 0.404
Gapped
Lambda K H
0.267 0.0798 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 10,609,446
Number of extensions: 618632
Number of successful extensions: 2293
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1723
Number of HSP's successfully gapped: 352
Length of query: 697
Length of database: 6,701,793
Length adjustment: 100
Effective length of query: 597
Effective length of database: 3,909,693
Effective search space: 2334086721
Effective search space used: 2334086721
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (27.1 bits)