BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12781
(266 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q09225|NRF6_CAEEL Nose resistant to fluoxetine protein 6 OS=Caenorhabditis elegans
GN=nrf-6 PE=1 SV=3
Length = 822
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 121/264 (45%), Gaps = 36/264 (13%)
Query: 5 SCALNHQRLVTQCLMGFSLIKNTKKLISLDRSPDDIECVHGIRTLNAFMLLLSHKSMALF 64
S A NH + + ++ FS+ N +++ ++ +I +HG+R L+ ++L H
Sbjct: 342 SSAFNHPFI--KFILAFSMYTNGSEILQSKKNDREINSLHGVRFLSMCWIILGH------ 393
Query: 65 FNPYINRTQMASISSPLKLYDFTVLIVNLGKPW-TVVARAASLYTDPFIMLSGLLTSYAF 123
I + L + ++N K + T + A L D F LSG+L +++F
Sbjct: 394 --------TYYYIGTSLTTDNLVPTLINFPKQFHTQIIVQAPLAVDSFFFLSGMLAAFSF 445
Query: 124 LRQFEKNKKINVMK-----------EIVSRCFRLLPTLGALILFCTFILPFLGSGPQWNL 172
++ K + K R R+ PT ++LF + ++ +GP W
Sbjct: 446 FKKTMKADPNHPPKLSAFNWQTWPMYYYKRYIRITPTYIIVMLFDVTLFTYISNGPFWRP 505
Query: 173 VVSHHATICKQYWWRNMMFIHNY-FGFKNMCLTHTHHVGIDTQL-FFISPLLVYMVWRWP 230
+ +I WW N+++++N+ + C+ T ++ D Q F+ PLLV + +W
Sbjct: 506 IERQGCSIA---WWTNLIYLNNFLLQDQECCMGWTWYLANDMQFHIFLMPLLVIVFLKWG 562
Query: 231 -RNGL-LALGFFSIVSTILRFIVT 252
+ GL L+ G ++ S+++R I+T
Sbjct: 563 MKVGLGLSTGLIAL-SSLIRLIIT 585
>sp|Q79ZY2|OATA_STAAW O-acetyltransferase OatA OS=Staphylococcus aureus (strain MW2)
GN=oatA PE=3 SV=1
Length = 603
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 88 VLIVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFRLL 147
++I +L W L D F ++SG L + + ++ + +KI++++ R RL+
Sbjct: 32 IIIYHLNAQWL---SGGFLGVDTFFVISGYLITSLLISEYYRTQKIDLLEFWKRRLKRLI 88
Query: 148 PTLGALILFC---TFILPFLGSGPQWNLVVSHHATICKQY---WWRNMMFIHNYFGFKNM 201
P + L L C TF L F P+ + + A Y WW + + F
Sbjct: 89 PAV--LFLICVVLTFTLIF---KPELIIQMKRDAIAAIFYVSNWWYISQNVDYFNQFAIE 143
Query: 202 CLTHTHHVGIDTQLFFISPLLV-YMVWRW-PRNGLLALGFFSIVSTILRFIVTYKKQLSL 259
L H + I+ Q + + PL++ +++ R+ PRN + L S++S L ++ + +
Sbjct: 144 PLKHLWSLAIEEQFYLLFPLVITFLLHRFKPRNIIQTLFIVSLISLGLMIVIHFITGDNS 203
Query: 260 FIYFGN 265
+YFG
Sbjct: 204 RVYFGT 209
>sp|Q6G6A7|OATA_STAAS O-acetyltransferase OatA OS=Staphylococcus aureus (strain MSSA476)
GN=oatA PE=3 SV=1
Length = 603
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 88 VLIVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFRLL 147
++I +L W L D F ++SG L + + ++ + +KI++++ R RL+
Sbjct: 32 IIIYHLNAQWL---SGGFLGVDTFFVISGYLITSLLISEYYRTQKIDLLEFWKRRLKRLI 88
Query: 148 PTLGALILFC---TFILPFLGSGPQWNLVVSHHATICKQY---WWRNMMFIHNYFGFKNM 201
P + L L C TF L F P+ + + A Y WW + + F
Sbjct: 89 PAV--LFLICVVLTFTLIF---KPELIIQMKRDAIAAIFYVSNWWYISQNVDYFNQFAIE 143
Query: 202 CLTHTHHVGIDTQLFFISPLLV-YMVWRW-PRNGLLALGFFSIVSTILRFIVTYKKQLSL 259
L H + I+ Q + + PL++ +++ R+ PRN + L S++S L ++ + +
Sbjct: 144 PLKHLWSLAIEEQFYLLFPLVITFLLHRFKPRNIIQTLFIVSLISLGLMIVIHFITGDNS 203
Query: 260 FIYFGN 265
+YFG
Sbjct: 204 RVYFGT 209
>sp|Q7A3D6|OATA_STAAN O-acetyltransferase OatA OS=Staphylococcus aureus (strain N315)
GN=oatA PE=1 SV=1
Length = 603
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 88 VLIVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFRLL 147
++I +L W L D F ++SG L + + ++ + +KI++++ R RL+
Sbjct: 32 IIIYHLNAQWL---SGGFLGVDTFFVISGYLITSLLISEYYRTQKIDLLEFWKRRLKRLI 88
Query: 148 PTLGALILFC---TFILPFLGSGPQWNLVVSHHATICKQY---WWRNMMFIHNYFGFKNM 201
P + L L C TF L F P+ + + A Y WW + + F
Sbjct: 89 PAV--LFLICVVLTFTLIF---KPELIIQMKRDAIAAIFYVSNWWYISQNVDYFNQFAIE 143
Query: 202 CLTHTHHVGIDTQLFFISPLLV-YMVWRW-PRNGLLALGFFSIVSTILRFIVTYKKQLSL 259
L H + I+ Q + + PL++ +++ R+ PRN + L S++S L ++ + +
Sbjct: 144 PLKHLWSLAIEEQFYLLFPLVITFLLHRFKPRNIIQTLFIVSLISLGLMIVIHFITGDNS 203
Query: 260 FIYFGN 265
+YFG
Sbjct: 204 RVYFGT 209
>sp|Q99R71|OATA_STAAM O-acetyltransferase OatA OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=oatA PE=3 SV=1
Length = 603
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 88 VLIVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFRLL 147
++I +L W L D F ++SG L + + ++ + +KI++++ R RL+
Sbjct: 32 IIIYHLNAQWL---SGGFLGVDTFFVISGYLITSLLISEYYRTQKIDLLEFWKRRLKRLI 88
Query: 148 PTLGALILFC---TFILPFLGSGPQWNLVVSHHATICKQY---WWRNMMFIHNYFGFKNM 201
P + L L C TF L F P+ + + A Y WW + + F
Sbjct: 89 PAV--LFLICVVLTFTLIF---KPELIIQMKRDAIAAIFYVSNWWYISQNVDYFNQFAIE 143
Query: 202 CLTHTHHVGIDTQLFFISPLLV-YMVWRW-PRNGLLALGFFSIVSTILRFIVTYKKQLSL 259
L H + I+ Q + + PL++ +++ R+ PRN + L S++S L ++ + +
Sbjct: 144 PLKHLWSLAIEEQFYLLFPLVITFLLHRFKPRNIIQTLFIVSLISLGLMIVIHFITGDNS 203
Query: 260 FIYFGN 265
+YFG
Sbjct: 204 RVYFGT 209
>sp|Q5HCY3|OATA_STAAC O-acetyltransferase OatA OS=Staphylococcus aureus (strain COL)
GN=oatA PE=3 SV=1
Length = 603
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 88 VLIVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFRLL 147
++I +L W L D F ++SG L + + ++ + +KI++++ R RL+
Sbjct: 32 IIIYHLNAQWL---SGGFLGVDTFFVISGYLITSLLISEYYRTQKIDLLEFWKRRLKRLI 88
Query: 148 PTLGALILFC---TFILPFLGSGPQWNLVVSHHATICKQY---WWRNMMFIHNYFGFKNM 201
P + L L C TF L F P+ + + A Y WW + + F
Sbjct: 89 PAV--LFLICVVLTFTLIF---KPELIIQMKRDAIAAIFYVSNWWYISQNVDYFNQFAIE 143
Query: 202 CLTHTHHVGIDTQLFFISPLLV-YMVWRW-PRNGLLALGFFSIVSTILRFIVTYKKQLSL 259
L H + I+ Q + + PL++ +++ R+ PRN + L S++S L ++ + +
Sbjct: 144 PLKHLWSLAIEEQFYLLFPLVITFLLHRFKPRNIIQTLFIVSLISLGLMIVIHFITGDNS 203
Query: 260 FIYFGN 265
+YFG
Sbjct: 204 RVYFGT 209
>sp|Q2FV54|OATA_STAA8 O-acetyltransferase OatA OS=Staphylococcus aureus (strain NCTC
8325) GN=oatA PE=3 SV=1
Length = 603
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 88 VLIVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFRLL 147
++I +L W L D F ++SG L + + ++ + +KI++++ R RL+
Sbjct: 32 IIIYHLNAQWL---SGGFLGVDTFFVISGYLITSLLISEYYRTQKIDLLEFWKRRLKRLI 88
Query: 148 PTLGALILFC---TFILPFLGSGPQWNLVVSHHATICKQY---WWRNMMFIHNYFGFKNM 201
P + L L C TF L F P+ + + A Y WW + + F
Sbjct: 89 PAV--LFLICVVLTFTLIF---KPELIIQMKRDAIAAIFYVSNWWYISQNVDYFNQFAIE 143
Query: 202 CLTHTHHVGIDTQLFFISPLLV-YMVWRW-PRNGLLALGFFSIVSTILRFIVTYKKQLSL 259
L H + I+ Q + + PL++ +++ R+ PRN + L S++S L ++ + +
Sbjct: 144 PLKHLWSLAIEEQFYLLFPLVITFLLHRFKPRNIIQTLFIVSLISLGLMIVIHFITGDNS 203
Query: 260 FIYFGN 265
+YFG
Sbjct: 204 RVYFGT 209
>sp|Q6GDN2|OATA_STAAR O-acetyltransferase OatA OS=Staphylococcus aureus (strain MRSA252)
GN=oatA PE=3 SV=1
Length = 603
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 88 VLIVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFRLL 147
++I +L W L D F ++SG L + + ++ + +KI++++ R RL+
Sbjct: 32 IIIYHLNAQWL---SGGFLGVDTFFVISGYLITSLLISEYYRTQKIDLLEFWKRRLKRLI 88
Query: 148 PTLGALILFC---TFILPFLGSGPQWNLVVSHHATICKQY---WWRNMMFIHNYFGFKNM 201
P + L L C TF L F P+ + + A Y WW + + F
Sbjct: 89 PAV--LFLICVVLTFTLIF---KPELIIQMKRDAIAAIFYVSNWWYISQNVDYFNQFAIE 143
Query: 202 CLTHTHHVGIDTQLFFISPLLV-YMVWRW-PRNGLLALGFFSIVSTILRFIVTYKKQLSL 259
L H + I+ Q + + PL++ +++ R+ PRN + L S++S L ++ + +
Sbjct: 144 PLKHLWSLAIEEQFYLLFPLVITFLLHRFKPRNIIQTLFIVSLISLGLMIVIHFITGDNS 203
Query: 260 FIYFGN 265
+YFG
Sbjct: 204 RVYFGT 209
>sp|Q6GIB3|OTRF1_STAAR Putative O-acetyltransferase SAR0937 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR0937 PE=3 SV=1
Length = 604
Score = 38.5 bits (88), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 88 VLIVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFRLL 147
++I +L K W L D F ++SG L + L++++ I + + R RLL
Sbjct: 30 IIIYHLNKQWLT---GGFLGVDTFFVISGYLITSLLLKEYDDTGIIKLKSFWIRRLKRLL 86
Query: 148 PTLGALILFCTFILPFLGSGPQWNLVVSHHATICKQYWWRNMMFIH---NYFG-FKNMCL 203
P + L++ L S N++ H I ++ N +I NYF F M L
Sbjct: 87 PAVIVLLMVVGTATLLLKSD---NIIRVKHDIIAAIFYVSNWWYIAKDVNYFEQFSFMPL 143
Query: 204 THTHHVGIDTQLFFISPLLV 223
H + I+ Q + P+++
Sbjct: 144 KHLWSLAIEEQFYIFFPVIL 163
>sp|Q5HHB1|OTRF1_STAAC Putative O-acetyltransferase SACOL0978 OS=Staphylococcus aureus
(strain COL) GN=SACOL0978 PE=3 SV=1
Length = 604
Score = 38.1 bits (87), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 88 VLIVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFRLL 147
++I +L K W L D F ++SG L + L++++ I + + R RLL
Sbjct: 30 IIIYHLNKQWLT---GGFLGVDTFFVISGYLITSLLLKEYDDTGIIKLKSFWIRRLKRLL 86
Query: 148 PTLGALILFCTFILPFLGSGPQWNLVVSHHATICKQYWWRNMMFIH---NYFG-FKNMCL 203
P + L++ L S N++ H I ++ N +I NYF F M L
Sbjct: 87 PAVIVLLMVVGTATLLLKSD---NIIRVKHDIIAAIFYVSNWWYIAKDVNYFEQFSFMPL 143
Query: 204 THTHHVGIDTQLFFISPLLV 223
H + I+ Q + P+++
Sbjct: 144 KHLWSLAIEEQFYIFFPVIL 163
>sp|Q7A1B1|OTRF1_STAAW Putative O-acetyltransferase MW0856 OS=Staphylococcus aureus
(strain MW2) GN=MW0856 PE=3 SV=1
Length = 604
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 88 VLIVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFRLL 147
++I +L K W L D F ++SG L + L++++ I + + R RLL
Sbjct: 30 IIIYHLNKQWLT---GGFLGVDTFFVISGYLITSLLLKEYDDTGIIKLKSFWIRRLKRLL 86
Query: 148 PTLGALILFCTFILPFLGSGPQWNLVVSHHATICKQYWWRNMMFIH---NYFG-FKNMCL 203
P + L++ L S N++ H I ++ N +I NYF F M L
Sbjct: 87 PAVIVLLMVVGTATLLLKSD---NIIRVKHDIIAAIFYVSNWWYIAKDVNYFEQFSFMPL 143
Query: 204 THTHHVGIDTQLFFISPLLV 223
H + I+ Q + P+++
Sbjct: 144 KHLWSLAIEEQFYIFFPVIL 163
>sp|Q6GAV2|OTRF1_STAAS Putative O-acetyltransferase SAS0844 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS0844 PE=3 SV=1
Length = 604
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 88 VLIVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFRLL 147
++I +L K W L D F ++SG L + L++++ I + + R RLL
Sbjct: 30 IIIYHLNKQWLT---GGFLGVDTFFVISGYLITSLLLKEYDDTGIIKLKSFWIRRLKRLL 86
Query: 148 PTLGALILFCTFILPFLGSGPQWNLVVSHHATICKQYWWRNMMFIH---NYFG-FKNMCL 203
P + L++ L S N++ H I ++ N +I NYF F M L
Sbjct: 87 PAVIVLLMVVGTATLLLKSD---NIIRVKHDIIAAIFYVSNWWYIAKDVNYFEQFSFMPL 143
Query: 204 THTHHVGIDTQLFFISPLLV 223
H + I+ Q + P+++
Sbjct: 144 KHLWSLAIEEQFYIFFPVIL 163
>sp|Q7A6G7|OTRF1_STAAN Putative O-acetyltransferase SA0834 OS=Staphylococcus aureus
(strain N315) GN=SA0834 PE=3 SV=1
Length = 604
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 88 VLIVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFRLL 147
++I +L K W L D F ++SG L + L++++ I + + R RLL
Sbjct: 30 IIIYHLNKQWLT---GGFLGVDTFFVISGYLITSLLLKEYDDTGIIKLKSFWIRRLKRLL 86
Query: 148 PTLGALILFCTFILPFLGSGPQWNLVVSHHATICKQYWWRNMMFIH---NYFG-FKNMCL 203
P + L++ L S N++ H I ++ N +I NYF F M L
Sbjct: 87 PAVIVLLMVVGTATLLLKSD---NIIRVKHDIIAAIFYVSNWWYIAKDVNYFEQFSFMPL 143
Query: 204 THTHHVGIDTQLFFISPLLV 223
H + I+ Q + P+++
Sbjct: 144 KHLWSLAIEEQFYIFFPVIL 163
>sp|Q99VB6|OTRF1_STAAM Putative O-acetyltransferase SAV0974 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV0974 PE=3 SV=1
Length = 604
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 88 VLIVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFRLL 147
++I +L K W L D F ++SG L + L++++ I + + R RLL
Sbjct: 30 IIIYHLNKQWLT---GGFLGVDTFFVISGYLITSLLLKEYDDTGIIKLKSFWIRRLKRLL 86
Query: 148 PTLGALILFCTFILPFLGSGPQWNLVVSHHATICKQYWWRNMMFIH---NYFG-FKNMCL 203
P + L++ L S N++ H I ++ N +I NYF F M L
Sbjct: 87 PAVIVLLMVVGTATLLLKSD---NIIRVKHDIIAAIFYVSNWWYIAKDVNYFEQFSFMPL 143
Query: 204 THTHHVGIDTQLFFISPLLV 223
H + I+ Q + P+++
Sbjct: 144 KHLWSLAIEEQFYIFFPVIL 163
>sp|P37800|L_TOSV RNA-directed RNA polymerase L OS=Toscana virus GN=L PE=3 SV=1
Length = 2095
Score = 34.3 bits (77), Expect = 1.0, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 97 WTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMKEIVSRCFR 145
W ++ R S++T+ F+M+ + FLR + +K++ + E VS+ F+
Sbjct: 1018 WPLIIRGCSMFTNKFMMM-----NLDFLRIIDSHKELQIEDEFVSKLFK 1061
>sp|O15111|IKKA_HUMAN Inhibitor of nuclear factor kappa-B kinase subunit alpha OS=Homo
sapiens GN=CHUK PE=1 SV=2
Length = 745
Score = 32.0 bits (71), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 31 ISLDRSPDDIECV-HGIRTLNAFMLLLSHKSMALFFNPYINRTQMASISSPLKLYDFTVL 89
ISLD +CV G+R +++M+ L KS ++ P+ +R+ ++ ++ +
Sbjct: 360 ISLDPRKPASQCVLDGVRGCDSYMVYLFDKSKTVYEGPFASRSLSDCVNYIVQDSKIQLP 419
Query: 90 IVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMK 137
I+ L K W +SGL Y+ L Q ++ +++++
Sbjct: 420 IIQLRKVWAEAVH----------YVSGLKEDYSRLFQGQRAAMLSLLR 457
>sp|Q60680|IKKA_MOUSE Inhibitor of nuclear factor kappa-B kinase subunit alpha OS=Mus
musculus GN=Chuk PE=1 SV=1
Length = 745
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 31 ISLDRSPDDIECV-HGIRTLNAFMLLLSHKSMALFFNPYINRTQMASISSPLKLYDFTVL 89
ISLD +CV G+R +++M+ L KS ++ P+ +R+ ++ ++ +
Sbjct: 360 ISLDPRKPASQCVLDGVRGCDSYMVYLFDKSKTVYEGPFASRSLSDCVNYIVQDSKIQLP 419
Query: 90 IVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMK 137
I+ L K W +SGL Y+ L Q ++ +++++
Sbjct: 420 IIQLRKVWAEAVH----------YVSGLKEDYSRLFQGQRAAMLSLLR 457
>sp|Q95KV1|IKKA_BOVIN Inhibitor of nuclear factor kappa-B kinase subunit alpha OS=Bos
taurus GN=CHUK PE=1 SV=1
Length = 740
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 31 ISLDRSPDDIECV-HGIRTLNAFMLLLSHKSMALFFNPYINRTQMASISSPLKLYDFTVL 89
ISLD +CV G+R +++M+ L KS ++ P+ +R+ ++ ++ +
Sbjct: 360 ISLDPRKPASQCVLDGVRGCDSYMVYLFDKSKTVYEGPFASRSLSDCVNYIVQDSKIQLP 419
Query: 90 IVNLGKPWTVVARAASLYTDPFIMLSGLLTSYAFLRQFEKNKKINVMK 137
I+ L K W +SGL Y+ L Q ++ +++++
Sbjct: 420 IIQLRKVWAEAVH----------YVSGLKEDYSRLFQGQRAAMLSLLR 457
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.142 0.460
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,239,978
Number of Sequences: 539616
Number of extensions: 3525392
Number of successful extensions: 9009
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 8987
Number of HSP's gapped (non-prelim): 22
length of query: 266
length of database: 191,569,459
effective HSP length: 115
effective length of query: 151
effective length of database: 129,513,619
effective search space: 19556556469
effective search space used: 19556556469
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 60 (27.7 bits)