Your job contains 1 sequence.
>psy12788
GRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSS
PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS
VELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGND
RYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNE
ILTCVRIPTDSSEV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12788
(254 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BVT1 - symbol:IFT172 "Uncharacterized protein... 757 9.7e-74 1
ZFIN|ZDB-GENE-040827-1 - symbol:ift172 "intraflagellar tr... 752 3.3e-73 1
MGI|MGI:2682064 - symbol:Ift172 "intraflagellar transport... 750 5.4e-73 1
UNIPROTKB|E2RF25 - symbol:IFT172 "Uncharacterized protein... 746 1.4e-72 1
UNIPROTKB|Q9UG01 - symbol:IFT172 "Intraflagellar transpor... 745 1.9e-72 1
RGD|620744 - symbol:Ift172 "intraflagellar transport 172 ... 745 1.9e-72 1
UNIPROTKB|I3LPC6 - symbol:IFT172 "Uncharacterized protein... 740 6.3e-72 1
UNIPROTKB|E1BJT7 - symbol:LOC100848219 "Uncharacterized p... 739 8.1e-72 1
FB|FBgn0035317 - symbol:osm-1 "osm-1" species:7227 "Droso... 724 3.3e-70 1
UNIPROTKB|Q5DM57 - symbol:IFT172 "Intraflagellar transpor... 540 1.4e-50 1
WB|WBGene00003883 - symbol:osm-1 species:6239 "Caenorhabd... 450 5.1e-41 1
UNIPROTKB|Q22830 - symbol:osm-1 "Intraflagellar transport... 450 5.1e-41 1
>UNIPROTKB|E1BVT1 [details] [associations]
symbol:IFT172 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001841 "neural tube formation" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0007368 "determination of
left/right symmetry" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0016485 "protein processing"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011990
InterPro:IPR015943 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005929 Gene3D:1.25.40.10 GO:GO:0016485 GO:GO:0007224
OMA:MAFIFLN GeneTree:ENSGT00440000033648 EMBL:AADN02018468
EMBL:AADN02018469 IPI:IPI00580165 Ensembl:ENSGALT00000026634
Uniprot:E1BVT1
Length = 1753
Score = 757 (271.5 bits), Expect = 9.7e-74, P = 9.7e-74
Identities = 142/246 (57%), Positives = 180/246 (73%)
Query: 1 GRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSS 60
G++V HP PPYAL+W I+AAG D+ + Y +G V + FDY+ E+EFT A +S
Sbjct: 191 GKLVMHPCPPYALAWALNSIVAAGCDKKIVAYGKEGNVIQTFDYSRDS-SEKEFTTAAAS 249
Query: 61 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS 120
P GQAVV+GSYD +++ WSP + WEE K IP+LYTI++L+WKRDGSRI G LCG
Sbjct: 250 PGGQAVVIGSYDRLRVLNWSPRRGAWEEAKPKEIPHLYTITSLAWKRDGSRICAGTLCGG 309
Query: 121 VELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGND 180
VE F+ L+R+I+K KFEM YV PSQV+VK LS G V+LKS YGYEI +V I+G D
Sbjct: 310 VEQFDCCLRRSIYKNKFEMTYVGPSQVIVKNLS---TGTRVVLKSHYGYEIDEVKILGKD 366
Query: 181 RYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNE 240
RYLVA T DTLLLGD++ N LSEV W SG NEKF+FDN VC++FNAGEL+++EYG+N+
Sbjct: 367 RYLVAHTSDTLLLGDINSNKLSEVAWQGSGGNEKFFFDNENVCMIFNAGELTLVEYGSND 426
Query: 241 ILTCVR 246
IL VR
Sbjct: 427 ILGSVR 432
>ZFIN|ZDB-GENE-040827-1 [details] [associations]
symbol:ift172 "intraflagellar transport 172"
species:7955 "Danio rerio" [GO:0045494 "photoreceptor cell
maintenance" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0048793 "pronephros development" evidence=IGI]
[GO:0032006 "regulation of TOR signaling cascade" evidence=IMP]
[GO:0005929 "cilium" evidence=IEA;ISS] [GO:0042384 "cilium
assembly" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50005
PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040827-1 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005929 GO:GO:0045494 Gene3D:1.25.40.10
GO:GO:0042384 InterPro:IPR011044 SUPFAM:SSF50969 GO:GO:0048793
GO:GO:0032006 OMA:MAFIFLN EMBL:AY618923 EMBL:BX511178
IPI:IPI00492368 RefSeq:NP_001002312.1 UniGene:Dr.19771
ProteinModelPortal:Q5RHH4 STRING:Q5RHH4 Ensembl:ENSDART00000061334
GeneID:432389 KEGG:dre:432389 CTD:26160 eggNOG:NOG289811
GeneTree:ENSGT00440000033648 HOGENOM:HOG000259226
HOVERGEN:HBG098449 InParanoid:Q5RHH4 OrthoDB:EOG4F4S95
NextBio:20831026 ArrayExpress:Q5RHH4 Bgee:Q5RHH4 Uniprot:Q5RHH4
Length = 1745
Score = 752 (269.8 bits), Expect = 3.3e-73, P = 3.3e-73
Identities = 141/246 (57%), Positives = 183/246 (74%)
Query: 1 GRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSS 60
G+++ H PPYAL+W I+ AG D+ + Y +G V + FDY+ E+EFTVA SS
Sbjct: 191 GKLLTHACPPYALAWGTNSIIVAGCDKKIVAYGKEGNVIQTFDYSRDR-AEKEFTVAASS 249
Query: 61 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS 120
PSGQ++VVGS+D +++F WSP K W+E K IPNLYTI+ALSWK+DGSR++ G LCG
Sbjct: 250 PSGQSIVVGSFDRLRVFNWSPRKGTWDESSPKEIPNLYTITALSWKKDGSRLSVGTLCGG 309
Query: 121 VELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGND 180
VE+F+ L+R+I+K KFEM YV SQV+V+ LS G V+LKSQYGYEI +V +MG D
Sbjct: 310 VEMFDCCLRRSIYKNKFEMTYVGLSQVIVRNLS---TGTRVVLKSQYGYEIDEVKVMGKD 366
Query: 181 RYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNE 240
+YLVA T DTLLLGDL N LSEV W SG NEKF+F+N TVC++FNAGEL+++EYG+N+
Sbjct: 367 QYLVAHTSDTLLLGDLVSNKLSEVAWQGSGGNEKFFFENETVCMIFNAGELALVEYGSND 426
Query: 241 ILTCVR 246
IL VR
Sbjct: 427 ILGSVR 432
>MGI|MGI:2682064 [details] [associations]
symbol:Ift172 "intraflagellar transport 172" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0001841 "neural
tube formation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005929
"cilium" evidence=IDA] [GO:0005932 "microtubule basal body"
evidence=ISO] [GO:0007224 "smoothened signaling pathway"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IGI;IMP] [GO:0016485 "protein processing" evidence=IMP]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IMP] [GO:0031514 "motile cilium" evidence=ISO] [GO:0042384
"cilium assembly" evidence=IMP] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50005 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2682064 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005929 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0009434 GO:GO:0007368 GO:GO:0005932
GO:GO:0042384 GO:GO:0009953 GO:GO:0016485 GO:GO:0007224
GO:GO:0001841 OMA:MAFIFLN CTD:26160 eggNOG:NOG289811
GeneTree:ENSGT00440000033648 HOGENOM:HOG000259226
HOVERGEN:HBG098449 OrthoDB:EOG4F4S95 ChiTaRS:IFT172 EMBL:AY339616
EMBL:AK006007 EMBL:BC051928 EMBL:BC060948 EMBL:BC066096
EMBL:AK122461 IPI:IPI00762129 IPI:IPI00890239 RefSeq:NP_080574.5
UniGene:Mm.293023 ProteinModelPortal:Q6VH22 SMR:Q6VH22
STRING:Q6VH22 PhosphoSite:Q6VH22 PaxDb:Q6VH22 PRIDE:Q6VH22
Ensembl:ENSMUST00000041565 GeneID:67661 KEGG:mmu:67661
UCSC:uc008wya.1 UCSC:uc008wyb.1 InParanoid:Q6VH22 NextBio:325173
Bgee:Q6VH22 Genevestigator:Q6VH22 Uniprot:Q6VH22
Length = 1749
Score = 750 (269.1 bits), Expect = 5.4e-73, P = 5.4e-73
Identities = 138/246 (56%), Positives = 182/246 (73%)
Query: 1 GRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSS 60
G++V HP PPYAL+W I+AAG DR + Y +G V + FDY+ +EREFT A +S
Sbjct: 191 GKLVNHPCPPYALAWATNSIVAAGCDRRIVAYGKEGHVLQTFDYSRDP-QEREFTTAAAS 249
Query: 61 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS 120
P GQ+VV+GSYD +++F WSP +S+WEE K I NLYT++AL+WKRDGSR+ G LCG
Sbjct: 250 PGGQSVVLGSYDRLRVFNWSPRRSIWEEAKPKEIANLYTVTALAWKRDGSRLCAGTLCGG 309
Query: 121 VELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGND 180
VE F+ L+R+I+K KFE+ YV PSQV+VK LS G V+LKS YGYE+ +V I+G +
Sbjct: 310 VEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYEVEEVKILGKE 366
Query: 181 RYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNE 240
RYLVA T DTLLLGDL+ N LSE+ W SG NEK++F+N VC++FNAGEL+++EYG+N+
Sbjct: 367 RYLVAHTSDTLLLGDLNTNRLSEIAWQGSGGNEKYFFENENVCMIFNAGELTLVEYGSND 426
Query: 241 ILTCVR 246
L VR
Sbjct: 427 SLGSVR 432
>UNIPROTKB|E2RF25 [details] [associations]
symbol:IFT172 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0016485 "protein processing" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] [GO:0001841 "neural tube formation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005929
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0007368 GO:GO:0042384
GO:GO:0009953 GO:GO:0016485 GO:GO:0007224 GO:GO:0001841 OMA:MAFIFLN
CTD:26160 GeneTree:ENSGT00440000033648 EMBL:AAEX03010804
RefSeq:XP_540128.2 ProteinModelPortal:E2RF25
Ensembl:ENSCAFT00000008224 GeneID:483013 KEGG:cfa:483013
NextBio:20857476 Uniprot:E2RF25
Length = 1749
Score = 746 (267.7 bits), Expect = 1.4e-72, P = 1.4e-72
Identities = 139/246 (56%), Positives = 180/246 (73%)
Query: 1 GRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSS 60
G++V HP PPYAL+W I+AAG DR + Y +G V + FDY+ EREFT A +S
Sbjct: 191 GKLVNHPCPPYALAWATNSIVAAGCDRRIVAYGKEGHVLQTFDYSRDP-NEREFTTAAAS 249
Query: 61 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS 120
P GQ+VV+GSYD +++ WSP +SVWEE K I NLYT++AL+WKRDGSR+ G LCG
Sbjct: 250 PGGQSVVLGSYDRLRVLNWSPRRSVWEEAKPKEIANLYTVTALAWKRDGSRLCAGTLCGG 309
Query: 121 VELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGND 180
VE F+ L+R+I+K KFE+ YV PSQV+VK LS G V+LKS YGYE+ +V I+G +
Sbjct: 310 VEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYEVEEVKILGKE 366
Query: 181 RYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNE 240
RYLVA T DTLLLGDL+ N LSEV W SG NEK++F+N VC++FNAGEL+++EYG+N+
Sbjct: 367 RYLVAHTSDTLLLGDLNTNRLSEVAWQGSGGNEKYFFENENVCMIFNAGELTLVEYGSND 426
Query: 241 ILTCVR 246
L VR
Sbjct: 427 TLGSVR 432
>UNIPROTKB|Q9UG01 [details] [associations]
symbol:IFT172 "Intraflagellar transport protein 172
homolog" species:9606 "Homo sapiens" [GO:0001841 "neural tube
formation" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0005929 "cilium" evidence=ISS] [GO:0042384 "cilium assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50005 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 EMBL:CH471053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005929 GO:GO:0007368
GO:GO:0042384 GO:GO:0009953
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0016485
GO:GO:0007224 GO:GO:0001841 EMBL:AC074117 OMA:MAFIFLN CTD:26160
eggNOG:NOG289811 HOGENOM:HOG000259226 HOVERGEN:HBG098449
OrthoDB:EOG4F4S95 EMBL:BC008024 EMBL:BC047294 EMBL:BC137126
EMBL:AL110218 EMBL:AL117421 EMBL:AB033005 IPI:IPI00410096
IPI:IPI00889747 PIR:T14758 PIR:T17224 RefSeq:NP_056477.1
UniGene:Hs.127401 ProteinModelPortal:Q9UG01 SMR:Q9UG01
IntAct:Q9UG01 STRING:Q9UG01 PhosphoSite:Q9UG01 DMDM:182662418
PaxDb:Q9UG01 PRIDE:Q9UG01 Ensembl:ENST00000260570 GeneID:26160
KEGG:hsa:26160 UCSC:uc002rku.3 GeneCards:GC02M027667
H-InvDB:HIX0001924 H-InvDB:HIX0119024 HGNC:HGNC:30391 HPA:HPA044893
MIM:607386 neXtProt:NX_Q9UG01 PharmGKB:PA142671666
InParanoid:Q9UG01 PhylomeDB:Q9UG01 ChiTaRS:IFT172 GenomeRNAi:26160
NextBio:48259 ArrayExpress:Q9UG01 Bgee:Q9UG01 CleanEx:HS_IFT172
Genevestigator:Q9UG01 Uniprot:Q9UG01
Length = 1749
Score = 745 (267.3 bits), Expect = 1.9e-72, P = 1.9e-72
Identities = 138/246 (56%), Positives = 181/246 (73%)
Query: 1 GRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSS 60
G++V HP PPYAL+W I+AAG DR + Y +G + + FDY+ +EREFT A SS
Sbjct: 191 GKLVNHPCPPYALAWATNSIVAAGCDRKIVAYGKEGHMLQTFDYSRDP-QEREFTTAVSS 249
Query: 61 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS 120
P GQ+VV+GSYD +++F W P +S+WEE K I NLYTI+AL+WKRDGSR+ G LCG
Sbjct: 250 PGGQSVVLGSYDRLRVFNWIPRRSIWEEAKPKEITNLYTITALAWKRDGSRLCVGTLCGG 309
Query: 121 VELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGND 180
VE F+ L+R+I+K KFE+ YV PSQV+VK LS G V+LKS YGYE+ +V I+G +
Sbjct: 310 VEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYEVEEVKILGKE 366
Query: 181 RYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNE 240
RYLVA T +TLLLGDL+ N LSE+ W SG NEK++F+N VC++FNAGEL+++EYGNN+
Sbjct: 367 RYLVAHTSETLLLGDLNTNRLSEIAWQGSGGNEKYFFENENVCMIFNAGELTLVEYGNND 426
Query: 241 ILTCVR 246
L VR
Sbjct: 427 TLGSVR 432
>RGD|620744 [details] [associations]
symbol:Ift172 "intraflagellar transport 172 homolog
(Chlamydomonas)" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0001841 "neural tube formation"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005929
"cilium" evidence=ISO;ISS] [GO:0007224 "smoothened signaling
pathway" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=IDA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISO] [GO:0016485 "protein processing" evidence=ISO]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=ISO] [GO:0042384 "cilium assembly" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
PROSITE:PS50005 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 RGD:620744 GO:GO:0007275 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005929
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0000122 GO:GO:0042384
GO:GO:0008134 CTD:26160 HOVERGEN:HBG098449 EMBL:AF226993
IPI:IPI00203078 RefSeq:NP_446244.1 UniGene:Rn.171849
ProteinModelPortal:Q9JKU3 GeneID:116475 KEGG:rno:116475
NextBio:619036 Genevestigator:Q9JKU3 Uniprot:Q9JKU3
Length = 1749
Score = 745 (267.3 bits), Expect = 1.9e-72, P = 1.9e-72
Identities = 137/246 (55%), Positives = 182/246 (73%)
Query: 1 GRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSS 60
G++V HP PPYAL+W I+AAG DR + Y +G V + FDY+ +EREFT A +S
Sbjct: 191 GKLVNHPCPPYALAWATNSIVAAGCDRRIVAYGKEGHVLQTFDYSRDP-QEREFTTAAAS 249
Query: 61 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS 120
P GQ+VV+GSYD +++F WSP +S+WEE K I NLYT++AL+WKRDGSR+ G LCG
Sbjct: 250 PGGQSVVLGSYDRLRVFNWSPRRSIWEEAKPKEIANLYTVTALAWKRDGSRLCAGTLCGG 309
Query: 121 VELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGND 180
VE F+ L+R+I+K KFE+ YV PSQ++VK LS G V+LKS YGYE+ +V I+G +
Sbjct: 310 VEQFDCCLRRSIYKNKFELTYVGPSQLIVKNLSS---GTRVVLKSHYGYEVEEVKILGKE 366
Query: 181 RYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNE 240
RYLVA T DTLLLGDL+ N LSE+ W SG NEK++F+N VC++FNAGEL+++EYG+N+
Sbjct: 367 RYLVAHTSDTLLLGDLNTNRLSEIPWQGSGGNEKYFFENENVCMIFNAGELTLVEYGSND 426
Query: 241 ILTCVR 246
L VR
Sbjct: 427 SLGSVR 432
>UNIPROTKB|I3LPC6 [details] [associations]
symbol:IFT172 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0016485
"protein processing" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0007368 "determination of
left/right symmetry" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0005929 "cilium" evidence=IEA]
[GO:0001841 "neural tube formation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005929
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0007368 GO:GO:0042384
GO:GO:0009953 GO:GO:0016485 GO:GO:0007224 GO:GO:0001841 OMA:MAFIFLN
GeneTree:ENSGT00440000033648 EMBL:FP476009 RefSeq:XP_003354937.1
Ensembl:ENSSSCT00000028161 GeneID:100625100 KEGG:ssc:100625100
Uniprot:I3LPC6
Length = 1749
Score = 740 (265.6 bits), Expect = 6.3e-72, P = 6.3e-72
Identities = 138/246 (56%), Positives = 180/246 (73%)
Query: 1 GRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSS 60
G++V HP PPYAL+W I+AAG DR + Y +G V + FDY+ +EREFT A +S
Sbjct: 191 GKLVNHPCPPYALAWATNSIVAAGCDRRIVAYGREGHVLQTFDYSRDP-QEREFTTAAAS 249
Query: 61 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS 120
P GQ+VV+GSYD +++ WSP +S+WEE K I NLYT++AL+WKRDGSR+ G LCG
Sbjct: 250 PGGQSVVLGSYDRLRVLNWSPRRSIWEEAKPKEIANLYTVTALAWKRDGSRLCAGTLCGG 309
Query: 121 VELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGND 180
VE F+ L+R+I+K KFE+ YV PSQV+VK LS G V+LKS YGYE+ +V I+G +
Sbjct: 310 VEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYEVEEVKILGKE 366
Query: 181 RYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNE 240
RYLVA T DTLLLGDL N LSEV W SG NEK++F+N VC++FNAGEL+++EYG+N+
Sbjct: 367 RYLVAHTSDTLLLGDLATNRLSEVAWQGSGGNEKYFFENENVCMIFNAGELTLVEYGSND 426
Query: 241 ILTCVR 246
L VR
Sbjct: 427 PLGSVR 432
>UNIPROTKB|E1BJT7 [details] [associations]
symbol:LOC100848219 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0016485 "protein processing" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] [GO:0001841 "neural tube formation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005929
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0007368 GO:GO:0042384
GO:GO:0009953 GO:GO:0016485 GO:GO:0007224 GO:GO:0001841 OMA:MAFIFLN
GeneTree:ENSGT00440000033648 EMBL:DAAA02031593 IPI:IPI00685930
RefSeq:XP_003582850.1 RefSeq:XP_003586706.1
ProteinModelPortal:E1BJT7 PRIDE:E1BJT7 Ensembl:ENSBTAT00000024164
GeneID:100848219 KEGG:bta:100848219 Uniprot:E1BJT7
Length = 1749
Score = 739 (265.2 bits), Expect = 8.1e-72, P = 8.1e-72
Identities = 138/246 (56%), Positives = 179/246 (72%)
Query: 1 GRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSS 60
G++V HP PPYAL+W I+AAG DR + Y +G V + FDY+ EREFT A +S
Sbjct: 191 GKLVNHPCPPYALAWATNSIVAAGCDRRIVAYGKEGHVLQTFDYSRDPL-EREFTTAAAS 249
Query: 61 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS 120
P GQ+VV+GSYD +++ WSP +++WEE K I NLYTI+AL+WKRDGSR+ G LCG
Sbjct: 250 PGGQSVVLGSYDRLRVLNWSPRRNIWEEAKPKEIANLYTITALAWKRDGSRLCAGTLCGG 309
Query: 121 VELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGND 180
VE F+ L+R+I+K KFE+ YV PSQV+VK LS G V+LKS YGYE+ +V I+G +
Sbjct: 310 VEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYEVEEVKILGKE 366
Query: 181 RYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNE 240
RYLVA T DTLLLGDL N LSEV W SG NEK++F+N VC++FNAGEL+++EYG+N+
Sbjct: 367 RYLVAHTSDTLLLGDLTTNRLSEVAWQGSGGNEKYFFENENVCMIFNAGELTLVEYGSND 426
Query: 241 ILTCVR 246
L VR
Sbjct: 427 TLGSVR 432
>FB|FBgn0035317 [details] [associations]
symbol:osm-1 "osm-1" species:7227 "Drosophila melanogaster"
[GO:0007018 "microtubule-based movement" evidence=ISS] [GO:0005871
"kinesin complex" evidence=ISS] [GO:0035058 "nonmotile primary
cilium assembly" evidence=IMP] [GO:0031513 "nonmotile primary
cilium" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=ISM;IEP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50005 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 GO:GO:0007275 GO:GO:0005871
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005929 GO:GO:0003777 GO:GO:0007018 GO:GO:0035058 OMA:MAFIFLN
eggNOG:NOG289811 CTD:38282 RefSeq:NP_647700.1 UniGene:Dm.15839
ProteinModelPortal:Q9W040 SMR:Q9W040 IntAct:Q9W040 STRING:Q9W040
GeneID:38282 KEGG:dme:Dmel_CG13809 FlyBase:FBgn0035317
InParanoid:Q9W040 OrthoDB:EOG4DNCK6 PhylomeDB:Q9W040
GenomeRNAi:38282 NextBio:807842 Bgee:Q9W040 Uniprot:Q9W040
Length = 1772
Score = 724 (259.9 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 138/246 (56%), Positives = 180/246 (73%)
Query: 1 GRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSS 60
GRVVQHPVPP+AL+WP G A G D+ + Y+S GR R FD++ EREFTVA S
Sbjct: 208 GRVVQHPVPPFALAWPQGGFCAGGCDQRIVFYDSMGRQLRTFDHSRTE-GEREFTVAACS 266
Query: 61 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS 120
P+GQAV GS+D I++FAWSP + W E K + LYT+S+L W+RDG+R+A G + G+
Sbjct: 267 PNGQAVAFGSFDRIRIFAWSPRQGAWSESATKEVACLYTLSSLLWRRDGARLALGSVSGA 326
Query: 121 VELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGND 180
V LFESVL+RT+W+ KFE+I+V+PSQ+LV+ L+ S+ + ++SQ G EI DV IMG D
Sbjct: 327 VLLFESVLRRTVWQDKFELIFVAPSQLLVRSLTEPSQA--LTIESQLGLEIDDVRIMGRD 384
Query: 181 RYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNE 240
YLVART ++L+L DL RNL SEV W SG +E+FYF+N TVCL+FN GELS++EYG N
Sbjct: 385 NYLVARTEESLILCDLTRNLSSEVPWTASGHHERFYFENPTVCLIFNVGELSLVEYGENS 444
Query: 241 ILTCVR 246
IL VR
Sbjct: 445 ILGSVR 450
>UNIPROTKB|Q5DM57 [details] [associations]
symbol:IFT172 "Intraflagellar transport protein 172"
species:3055 "Chlamydomonas reinhardtii" [GO:0005932 "microtubule
basal body" evidence=IDA] [GO:0030992 "intraflagellar transport
particle B" evidence=IDA] [GO:0031514 "motile cilium" evidence=IDA]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320 GO:GO:0007275
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005929 eggNOG:COG2319 GO:GO:0009434 GO:GO:0005932
GO:GO:0030992 EMBL:AY615520 EMBL:DS496120 RefSeq:XP_001691740.1
UniGene:Cre.13782 ProteinModelPortal:Q5DM57 STRING:Q5DM57
EnsemblPlants:EDP04848 GeneID:5717250 KEGG:cre:CHLREDRAFT_183240
OMA:MAFIFLN ProtClustDB:CLSN2702687 Uniprot:Q5DM57
Length = 1755
Score = 540 (195.1 bits), Expect = 1.4e-50, P = 1.4e-50
Identities = 112/244 (45%), Positives = 159/244 (65%)
Query: 2 RVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSP 61
++V H PY+L W I AAG+D V Y+ +GR R FDY+ + + REFT +P
Sbjct: 198 QLVVHSCVPYSLGW-GSCIAAAGNDNRVVFYDLNGREIRSFDYSN-NDEVREFTTCAFNP 255
Query: 62 SGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSV 121
SG VV G+Y+ ++ ++ ++ WEE +K I N Y +SA SWK DGS++ G + G+V
Sbjct: 256 SGDTVVFGTYNRFYMYTFNIQRNDWEEAGHKQIDNFYAVSAASWKPDGSKMTVGSMTGAV 315
Query: 122 ELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDR 181
+++++ +KR ++KGKFE YVS S V+VK L G ++LKS YGYEI + I +DR
Sbjct: 316 DMYDACVKRHMYKGKFEFTYVSKSAVIVKTLK---TGMRIVLKSVYGYEIEKINIY-HDR 371
Query: 182 YLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNEI 241
YL+ART TLL+GDL LSE+ W DS +EKF+F+N VC+V AGEL I+EYG N++
Sbjct: 372 YLIARTTYTLLMGDLDTCKLSEIPW-DSDGSEKFHFENERVCMVHYAGELHIVEYGRNDV 430
Query: 242 L-TC 244
L TC
Sbjct: 431 LGTC 434
>WB|WBGene00003883 [details] [associations]
symbol:osm-1 species:6239 "Caenorhabditis elegans"
[GO:0035058 "nonmotile primary cilium assembly" evidence=IMP]
[GO:0031513 "nonmotile primary cilium" evidence=IDA] [GO:0035869
"ciliary transition zone" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR015943
InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320 GO:GO:0007275
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
Gene3D:1.25.40.10 GO:GO:0035058 GO:GO:0035869 OMA:MAFIFLN
eggNOG:NOG289811 GeneTree:ENSGT00440000033648 HOGENOM:HOG000259226
EMBL:DQ360811 EMBL:FO081607 RefSeq:NP_510681.4 UniGene:Cel.253
ProteinModelPortal:Q22830 SMR:Q22830 STRING:Q22830 PaxDb:Q22830
EnsemblMetazoa:T27B1.1 GeneID:181715 KEGG:cel:CELE_T27B1.1
UCSC:T27B1.1 CTD:38282 WormBase:T27B1.1 InParanoid:Q22830
NextBio:915058 Uniprot:Q22830
Length = 1737
Score = 450 (163.5 bits), Expect = 5.1e-41, P = 5.1e-41
Identities = 96/239 (40%), Positives = 139/239 (58%)
Query: 8 VPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVV 67
VPPY L + ++ A SDR V Y +G V + FDY E+EF+ P+ Q VV
Sbjct: 194 VPPYNLVFTNHGLVVATSDRRVLSYTENGVVQQQFDYN--DQSEKEFSSISCDPTAQNVV 251
Query: 68 VGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESV 127
V SYD ++LF+WS + W+E I N YTI AL WK DGS I G +CG V +
Sbjct: 252 VASYDRLRLFSWSARRGAWDEGAPLEIQNAYTIGALGWKMDGSTIYAGTVCGGVFSVDCC 311
Query: 128 LKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVART 187
L+R + K +FE YV+PS V+++ ++ +++ VI S G I ++ IMG DRY++ T
Sbjct: 312 LRRGMLKSRFETTYVAPSHVILRDVTNDTR-TNVI--SNKGLAIDELKIMGKDRYVIGYT 368
Query: 188 PDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNEILTCVR 246
++++ D SE+ W SG +EKFYFD CL+ NAGE++++EYG + L VR
Sbjct: 369 SSSIIIADTESQRFSELEW-QSGGHEKFYFDFNNCCLIINAGEVTVVEYGVDGSLGWVR 426
>UNIPROTKB|Q22830 [details] [associations]
symbol:osm-1 "Intraflagellar transport protein osm-1"
species:6239 "Caenorhabditis elegans" [GO:0042384 "cilium assembly"
evidence=ISS] [GO:0005929 "cilium" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR015943
InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320 GO:GO:0007275
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
Gene3D:1.25.40.10 GO:GO:0035058 GO:GO:0035869 OMA:MAFIFLN
eggNOG:NOG289811 GeneTree:ENSGT00440000033648 HOGENOM:HOG000259226
EMBL:DQ360811 EMBL:FO081607 RefSeq:NP_510681.4 UniGene:Cel.253
ProteinModelPortal:Q22830 SMR:Q22830 STRING:Q22830 PaxDb:Q22830
EnsemblMetazoa:T27B1.1 GeneID:181715 KEGG:cel:CELE_T27B1.1
UCSC:T27B1.1 CTD:38282 WormBase:T27B1.1 InParanoid:Q22830
NextBio:915058 Uniprot:Q22830
Length = 1737
Score = 450 (163.5 bits), Expect = 5.1e-41, P = 5.1e-41
Identities = 96/239 (40%), Positives = 139/239 (58%)
Query: 8 VPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVV 67
VPPY L + ++ A SDR V Y +G V + FDY E+EF+ P+ Q VV
Sbjct: 194 VPPYNLVFTNHGLVVATSDRRVLSYTENGVVQQQFDYN--DQSEKEFSSISCDPTAQNVV 251
Query: 68 VGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESV 127
V SYD ++LF+WS + W+E I N YTI AL WK DGS I G +CG V +
Sbjct: 252 VASYDRLRLFSWSARRGAWDEGAPLEIQNAYTIGALGWKMDGSTIYAGTVCGGVFSVDCC 311
Query: 128 LKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVART 187
L+R + K +FE YV+PS V+++ ++ +++ VI S G I ++ IMG DRY++ T
Sbjct: 312 LRRGMLKSRFETTYVAPSHVILRDVTNDTR-TNVI--SNKGLAIDELKIMGKDRYVIGYT 368
Query: 188 PDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNEILTCVR 246
++++ D SE+ W SG +EKFYFD CL+ NAGE++++EYG + L VR
Sbjct: 369 SSSIIIADTESQRFSELEW-QSGGHEKFYFDFNNCCLIINAGEVTVVEYGVDGSLGWVR 426
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 254 254 0.00084 114 3 11 22 0.47 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 609 (65 KB)
Total size of DFA: 210 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.78u 0.11s 21.89t Elapsed: 00:00:01
Total cpu time: 21.78u 0.11s 21.89t Elapsed: 00:00:01
Start: Thu Aug 15 18:01:24 2013 End: Thu Aug 15 18:01:25 2013