RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12788
(254 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 45.5 bits (106), Expect = 2e-06
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 6 HPVPPYALSW-PAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQ 64
H A+ + P G A GSD T D R + + T S SG+
Sbjct: 225 HESDINAICFFPNGNAFATGSDD-ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283
Query: 65 AVVVGSYDN-IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL 123
++ G D ++ + + +S L DG +A G +++
Sbjct: 284 LLLAGYDDFNCNVWDALKADRAGVLAGHDN-----RVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 124 F 124
+
Sbjct: 339 W 339
Score = 26.6 bits (57), Expect = 3.6
Identities = 13/119 (10%), Positives = 36/119 (30%), Gaps = 19/119 (15%)
Query: 85 VWEEQPNKTIPNLY----TISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFEMI 140
+W+ + I+A+ + +G+ A G + LF+ + + + I
Sbjct: 210 LWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 269
Query: 141 YVSPSQVLVKP-----LSGESKGR--------GVILKSQYGYE--ITDVAIMGNDRYLV 184
+ V L+G G++ ++ + + + +
Sbjct: 270 ICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA 328
Score = 25.9 bits (55), Expect = 6.2
Identities = 7/44 (15%), Positives = 15/44 (34%)
Query: 100 ISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFEMIYVS 143
I A+ W D + G + +++S + +V
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 36.6 bits (83), Expect = 0.002
Identities = 12/114 (10%), Positives = 45/114 (39%), Gaps = 12/114 (10%)
Query: 14 SWPAGYILAAGSDRIVTIYE-SDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYD 72
P ++L+ D+ + +++ S G H + G+ ++ + D
Sbjct: 214 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV---GH--DNWVRGVLFHSGGKFILSCADD 268
Query: 73 N-IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFE 125
++++ + + + ++ +++L + + + G + +V+++E
Sbjct: 269 KTLRVWDYKNKRCMKTLNAHEH-----FVTSLDFHKTAPYVVTGSVDQTVKVWE 317
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 36.3 bits (82), Expect = 0.003
Identities = 15/118 (12%), Positives = 36/118 (30%), Gaps = 4/118 (3%)
Query: 6 HPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQA 65
H + +++ +D V I++ + + V C +
Sbjct: 216 HQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQ---GPNKHQSAVTCLQFNKNF 272
Query: 66 VVVGSYDN-IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVE 122
V+ S D +KL+ + + ++ + + + A G G+ E
Sbjct: 273 VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE 330
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 34.4 bits (77), Expect = 0.011
Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 7/79 (8%)
Query: 48 HYKEREFTVACSSPSGQAVVVGSYDN-IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWK 106
H E + G+ V DN + + S+++ + + ++ +
Sbjct: 262 HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSV------LSCDIS 315
Query: 107 RDGSRIACGGLCGSVELFE 125
D I G ++E
Sbjct: 316 VDDKYIVTGSGDKKATVYE 334
Score = 34.4 bits (77), Expect = 0.011
Identities = 18/119 (15%), Positives = 31/119 (26%), Gaps = 4/119 (3%)
Query: 1 GRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSS 60
G + P + ++ G + I R H T H S
Sbjct: 5 GAMGSKPAYSFHVT-ADGQMQPVPFPPDALIGPGIPR-HARQINTLNH--GEVVCAVTIS 60
Query: 61 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCG 119
+ V G +K++ S + + I + DG + GG
Sbjct: 61 NPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEAS 119
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 33.3 bits (74), Expect = 0.024
Identities = 9/83 (10%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 60 SPSGQAVVVGSYDN-IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLC 118
+ + + ++ + ++ S +K V + + + ++ + W D +RI G
Sbjct: 16 NKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE---HNGQVTGVDWAPDSNRIVTCGTD 72
Query: 119 GSVELFESVLKRTIWKGKFEMIY 141
+ ++ + I
Sbjct: 73 RNAYVWTLKGRTWKPTLVILRIN 95
Score = 31.4 bits (69), Expect = 0.10
Identities = 6/68 (8%), Positives = 13/68 (19%)
Query: 37 RVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPN 96
+ + V G LF + + +P
Sbjct: 229 DADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPK 288
Query: 97 LYTISALS 104
+ L+
Sbjct: 289 QSSQRGLT 296
Score = 28.3 bits (61), Expect = 0.85
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 100 ISALSWKRDGSRIACGGLCGSVELFE 125
IS +W +D ++IA V ++E
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYE 35
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 31.7 bits (70), Expect = 0.079
Identities = 17/90 (18%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Query: 38 VHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDN-IKLFAWSPSKSVWEEQPNKTIPN 96
+ ++ TVA S G+ + GS D ++++ V
Sbjct: 192 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT 251
Query: 97 LYT--ISALSWKRDGSRIACGGLCGSVELF 124
+ + ++ + RDG + G L SV+L+
Sbjct: 252 GHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 281
Score = 29.4 bits (64), Expect = 0.46
Identities = 12/81 (14%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Query: 39 HRIFDYT--APHYKEREFTVACSSPSGQAVVVGSYDNIKLFAWSPS-KSVWEEQPNKTIP 95
H + Y A H K + + N ++P+ + + +K++
Sbjct: 1 HYLVPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLD 60
Query: 96 NLYTISALSWKRDGSRIACGG 116
+ + + + DG +A G
Sbjct: 61 HTSVVCCVKFSNDGEYLATGC 81
Score = 25.5 bits (54), Expect = 7.1
Identities = 21/160 (13%), Positives = 43/160 (26%), Gaps = 15/160 (9%)
Query: 2 RVVQHPVPPYALSW-PAGYILAAGSDRIVTIY--ESDGRVHRIFDYTAPHYKEREFTVA- 57
+ + H + + G LA G ++ +Y V R+ D +A + +
Sbjct: 57 KSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSS 116
Query: 58 -----------CSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWK 106
C SP G+ + G+ D + ++ + S
Sbjct: 117 SPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD 176
Query: 107 RDGSRIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQ 146
+ S + + + VSP
Sbjct: 177 KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD 216
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 30.2 bits (66), Expect = 0.23
Identities = 5/58 (8%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Query: 60 SPSGQAVVVGSYDN-IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGG 116
PS +++ S+D + + + +++ + + ++ + G
Sbjct: 20 IPSKSLLLITSWDGSLTV--YKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVG 75
Score = 27.1 bits (58), Expect = 1.9
Identities = 5/27 (18%), Positives = 11/27 (40%)
Query: 99 TISALSWKRDGSRIACGGLCGSVELFE 125
IS + S + GS+ +++
Sbjct: 13 YISDIKIIPSKSLLLITSWDGSLTVYK 39
Score = 26.7 bits (57), Expect = 3.3
Identities = 14/82 (17%), Positives = 30/82 (36%), Gaps = 8/82 (9%)
Query: 12 ALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGS- 70
S ++ AGSD I++ + R +I ++ + E +V + S + + +
Sbjct: 258 EFSPRHKFLYTAGSDGIISCWNLQTR-KKIKNFAKFN----EDSVVKIACSDNILCLATS 312
Query: 71 YDNIKLFAWSPSKSVWEEQPNK 92
D K + E +
Sbjct: 313 DDTFKT--NAAIDQTIELNASS 332
>d1x9za_ d.292.1.1 (A:) DNA mismatch repair protein MutL
{Escherichia coli [TaxId: 562]}
Length = 182
Score = 27.5 bits (61), Expect = 1.3
Identities = 2/20 (10%), Positives = 5/20 (25%)
Query: 179 NDRYLVARTPDTLLLGDLHR 198
+ + + L L
Sbjct: 11 HSDCALLERDGNISLLSLPV 30
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 27.9 bits (60), Expect = 1.3
Identities = 17/125 (13%), Positives = 29/125 (23%), Gaps = 9/125 (7%)
Query: 3 VVQHPVPPYALSW-PAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSP 61
+ P P P AG Y+ + R R SS
Sbjct: 223 IPLIPGSPNPTKLVPRSMTSEAGE------YDLNDMYKRSSPINVDPGDYRMIIPLESSI 276
Query: 62 SGQAVVVGSYDNIKLFAWSPSKSV--WEEQPNKTIPNLYTISALSWKRDGSRIACGGLCG 119
+V V + ++ + K ++ L D + G
Sbjct: 277 LIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNNLTDLRLSADRKTVMVRKDDG 336
Query: 120 SVELF 124
+ F
Sbjct: 337 KIYTF 341
>d1aono_ b.35.1.1 (O:) Chaperonin-10 (GroES) {Escherichia coli
[TaxId: 562]}
Length = 97
Score = 26.3 bits (58), Expect = 1.5
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 22/99 (22%)
Query: 147 VLVKPLSGESKGRGVIL-------KSQYGYEITDVAIMGNDRYLVA--RTPDTLLLGDLH 197
V+VK E+K G I+ KS G + +GN R L P + +GD
Sbjct: 10 VIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLA----VGNGRILENGEVKPLDVKVGD-- 63
Query: 198 RNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGE-LSIIE 235
V++ D + DN L+ + + L+I+E
Sbjct: 64 -----IVIFNDGYGVKSEKIDNEE-VLIMSESDILAIVE 96
>d1p16a1 b.40.4.6 (A:246-390) mRNA capping enzyme alpha subunit
{Yeast (Candida albicans) [TaxId: 5476]}
Length = 145
Score = 26.9 bits (59), Expect = 1.5
Identities = 10/72 (13%), Positives = 18/72 (25%), Gaps = 4/72 (5%)
Query: 35 DGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTI 94
VH F + E A P + K W + + +K+
Sbjct: 47 GSNVHTDFAKLDLSDDDWERLKALEQPLQGRIAECRQSTTKKGYWEMLR----FRNDKSN 102
Query: 95 PNLYTISALSWK 106
N ++
Sbjct: 103 GNHISVVEKILV 114
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of
mitochondrial p450 systems {Cow (Bos taurus) [TaxId:
9913]}
Length = 230
Score = 27.2 bits (59), Expect = 1.6
Identities = 9/44 (20%), Positives = 13/44 (29%), Gaps = 5/44 (11%)
Query: 16 PAG-----YILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREF 54
PAG ++L S V IYE + +
Sbjct: 11 PAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVK 54
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 27.6 bits (59), Expect = 1.6
Identities = 6/75 (8%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Query: 5 QHPVPPYALSWPAGYILAAGSDRIVTIYE-SDGRVHRIFDYTAPHYKEREFTVACSSPSG 63
+ G+D + +++ + + + + T + V +
Sbjct: 251 VQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKW--TLDKQQLGNQQVGVVATGN 308
Query: 64 QAVVVGSYDN-IKLF 77
++ S D + +
Sbjct: 309 GRIISLSLDGTLNFY 323
>d2j8xa1 c.18.1.1 (A:26-255) Uracil-DNA glycosylase {Epstein-Barr
virus [TaxId: 10376]}
Length = 230
Score = 27.0 bits (59), Expect = 1.9
Identities = 10/67 (14%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Query: 30 TIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQ 89
T+Y + + P + GQA + ++ F PS +
Sbjct: 38 TVYPEEDMCMAWARFCDPSDIKVVILGQDPYHGGQANGL-AFSVAYGFPVPPSLRNIYAE 96
Query: 90 PNKTIPN 96
++++P
Sbjct: 97 LHRSLPE 103
>g1ncq.1 b.121.4.1 (D:,B:) Rhinovirus coat proteins {Human
rhinovirus B 14 (HRV-14) [TaxId: 12131]}
Length = 295
Score = 27.1 bits (60), Expect = 2.0
Identities = 12/73 (16%), Positives = 20/73 (27%), Gaps = 7/73 (9%)
Query: 21 LAAGSDRIVTIYE------SDGRVHRIFDY-TAPHYKEREFTVACSSPSGQAVVVGSYDN 73
L SDR+ I + + + Y P Y + S V +
Sbjct: 39 LNGYSDRVQQITLGNSTITTQEAANAVVCYAEWPEYLPDVDASDVNKTSKPDTSVCRFYT 98
Query: 74 IKLFAWSPSKSVW 86
+ W+ W
Sbjct: 99 LDSKTWTTGSKGW 111
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 27.2 bits (58), Expect = 2.3
Identities = 9/64 (14%), Positives = 22/64 (34%), Gaps = 6/64 (9%)
Query: 56 VACSSPSGQAVVVGSYDN-IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIAC 114
+ C V+ G+ D I+++ K + + + + AL + G ++
Sbjct: 16 ITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHD-----GGVWALKYAHGGILVSG 70
Query: 115 GGLC 118
Sbjct: 71 STDR 74
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain
{Fungi (Fusarium sp.) [TaxId: 29916]}
Length = 387
Score = 27.1 bits (58), Expect = 2.4
Identities = 16/82 (19%), Positives = 26/82 (31%), Gaps = 11/82 (13%)
Query: 45 TAPHYKEREFTVACSSPSGQAVVVGSYDNIKLF----------AWSPSKSVWEEQPNKTI 94
+ Y R F + P G + G F + P + + +Q +I
Sbjct: 282 SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI 341
Query: 95 PNLYTISALSWKRDGSRIACGG 116
+Y +L DG GG
Sbjct: 342 VRVYHSISL-LLPDGRVFNGGG 362
>d1irua_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 244
Score = 26.1 bits (57), Expect = 3.6
Identities = 8/20 (40%), Positives = 16/20 (80%)
Query: 22 AAGSDRIVTIYESDGRVHRI 41
+AG DR +TI+ +GR++++
Sbjct: 5 SAGFDRHITIFSPEGRLYQV 24
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 26.4 bits (56), Expect = 3.9
Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 7/78 (8%)
Query: 45 TAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIP-NLYTISAL 103
+ P V ++P+G + + ++ V + + + +
Sbjct: 11 SLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTV------PVGSLTDTEIYTEHSHQTTVA 64
Query: 104 SWKRDGSRIACGGLCGSV 121
G A G + G+V
Sbjct: 65 KTSPSGYYCASGDVHGNV 82
>d1lnsa2 b.18.1.13 (A:551-763) X-Prolyl dipeptidyl aminopeptidase
PepX {Lactococcus lactis [TaxId: 1358]}
Length = 213
Score = 26.1 bits (57), Expect = 4.0
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 8/43 (18%)
Query: 15 WPAGYILAAGSDRI-VTIYESDGRVHRIFDYTAPHYKEREFTV 56
P Y L D++ V +Y +D F++T ++ + +
Sbjct: 162 QPTIYHLEKA-DKLRVILYSTD------FEHTVRDNRKVTYEI 197
>d1rypa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 243
Score = 25.8 bits (56), Expect = 4.7
Identities = 8/19 (42%), Positives = 15/19 (78%)
Query: 23 AGSDRIVTIYESDGRVHRI 41
AG DR +TI+ +GR++++
Sbjct: 1 AGYDRHITIFSPEGRLYQV 19
>d2d32a1 d.128.1.4 (A:1-518) Gamma-glutamylcysteine synthetase GshA
{Escherichia coli [TaxId: 562]}
Length = 518
Score = 25.3 bits (55), Expect = 8.2
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 6/32 (18%)
Query: 184 VARTPDTLL--LGDLH----RNLLSEVLWPDS 209
V + +L + DLH RN+ E +WP S
Sbjct: 72 VDGDIEHMLTFMRDLHRYTARNMGDERMWPLS 103
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1
(beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 25.2 bits (53), Expect = 9.3
Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Query: 56 VACSSPSGQAVVVGSYDN-IKLF 77
V C Q +V G DN IK++
Sbjct: 18 VYCLQYDDQKIVSGLRDNTIKIW 40
Score = 25.2 bits (53), Expect = 10.0
Identities = 5/28 (17%), Positives = 13/28 (46%)
Query: 6 HPVPPYALSWPAGYILAAGSDRIVTIYE 33
H + L + I+++ D + I++
Sbjct: 266 HSGRVFRLQFDEFQIVSSSHDDTILIWD 293
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.421
Gapped
Lambda K H
0.267 0.0637 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 990,668
Number of extensions: 46149
Number of successful extensions: 190
Number of sequences better than 10.0: 1
Number of HSP's gapped: 178
Number of HSP's successfully gapped: 42
Length of query: 254
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 171
Effective length of database: 1,268,006
Effective search space: 216829026
Effective search space used: 216829026
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.0 bits)