Query psy12789
Match_columns 514
No_of_seqs 441 out of 2431
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 19:40:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12789.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12789hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ygq_A WIF-1, WNT inhibitory f 99.8 5.7E-20 2E-24 188.6 8.9 158 288-471 148-308 (324)
2 3fcs_B Integrin beta-3; beta p 99.8 8.8E-19 3E-23 195.3 17.4 174 241-419 390-600 (690)
3 3k6s_B Integrin beta-2; cell r 99.7 3.8E-18 1.3E-22 189.9 9.8 173 241-419 382-592 (687)
4 2ygq_A WIF-1, WNT inhibitory f 99.7 1.1E-17 3.9E-22 171.5 6.3 127 289-421 181-310 (324)
5 2vj2_A Jagged-1; signalling, p 99.6 2.3E-16 7.9E-21 147.0 6.2 121 294-419 39-169 (169)
6 3fcs_B Integrin beta-3; beta p 99.6 1.8E-15 6.2E-20 168.7 10.7 119 294-420 494-629 (690)
7 1z1y_A Ookinete surface protei 99.6 3.1E-16 1.1E-20 147.9 3.0 129 292-421 10-177 (186)
8 2vj3_A Neurogenic locus notch 99.6 6.2E-15 2.1E-19 132.1 9.6 97 325-421 14-121 (135)
9 4d90_A EGF-like repeat and dis 99.5 6.7E-14 2.3E-18 125.8 9.4 111 292-421 5-135 (143)
10 3k6s_B Integrin beta-2; cell r 99.5 4.4E-14 1.5E-18 157.3 7.2 105 294-398 483-607 (687)
11 2vj2_A Jagged-1; signalling, p 99.4 5E-14 1.7E-18 131.2 4.5 141 303-466 16-164 (169)
12 2p28_B Integrin beta-2; hybrid 99.4 4E-13 1.4E-17 130.2 8.6 156 241-420 43-215 (217)
13 3zyj_B Netrin-G1; cell adhesio 99.4 1.5E-13 5.3E-18 144.5 3.4 240 111-419 114-398 (426)
14 4aqs_A Laminin subunit beta-1; 99.4 1.2E-12 3.9E-17 142.3 9.6 90 372-466 422-520 (525)
15 1z1y_A Ookinete surface protei 99.3 1.3E-13 4.4E-18 129.9 1.5 121 333-469 23-173 (186)
16 2vj3_A Neurogenic locus notch 99.3 5.2E-12 1.8E-16 113.0 10.3 102 350-466 3-114 (135)
17 4d90_A EGF-like repeat and dis 99.3 7.8E-12 2.7E-16 112.3 9.1 101 354-469 2-131 (143)
18 2bou_A EGF-like module contain 99.3 3.2E-12 1.1E-16 115.2 5.7 108 289-419 3-134 (143)
19 2gy5_A Angiopoietin-1 receptor 99.2 1.9E-11 6.6E-16 129.5 9.1 113 304-421 185-322 (423)
20 1tpg_A T-plasminogen activator 99.1 2.1E-11 7.3E-16 102.2 4.2 82 334-421 1-88 (91)
21 2p28_B Integrin beta-2; hybrid 99.1 2.5E-11 8.7E-16 117.6 5.1 75 324-420 96-176 (217)
22 1yo8_A Thrombospondin-2; EGF, 99.1 1.1E-10 3.8E-15 128.7 9.0 84 335-419 25-146 (634)
23 4fbr_A Lectin, myxobacterial h 99.1 3.5E-13 1.2E-17 133.8 -10.7 117 295-422 40-205 (267)
24 2gy5_A Angiopoietin-1 receptor 99.0 3.9E-10 1.3E-14 119.5 9.8 122 294-420 204-351 (423)
25 2bou_A EGF-like module contain 99.0 4.4E-10 1.5E-14 101.1 5.0 107 358-468 7-131 (143)
26 4fbr_A Lectin, myxobacterial h 98.9 8.4E-12 2.9E-16 123.9 -9.6 155 306-470 15-201 (267)
27 1tpg_A T-plasminogen activator 98.8 1.7E-09 5.8E-14 90.5 4.2 78 303-384 1-86 (91)
28 4aqt_A Laminin subunit gamma-1 98.8 1.3E-10 4.5E-15 121.0 -4.0 29 111-139 83-112 (375)
29 1yo8_A Thrombospondin-2; EGF, 98.8 7.5E-09 2.6E-13 114.3 7.9 115 351-466 2-139 (634)
30 2y38_A Laminin subunit alpha-5 98.7 2.5E-09 8.6E-14 112.1 1.9 28 112-139 91-118 (403)
31 2wg3_C Hedgehog-interacting pr 98.7 2.3E-09 7.8E-14 114.8 0.3 78 336-420 378-456 (463)
32 2w86_A Fibrillin-1, fibrillin1 98.7 2.3E-09 7.8E-14 96.9 -0.5 112 293-416 10-141 (147)
33 1x7a_L Coagulation factor IX, 98.6 1.5E-08 5.3E-13 91.9 4.0 76 347-425 44-132 (146)
34 1uzk_A Fibrillin-1; glycoprote 98.6 7.6E-09 2.6E-13 95.0 1.9 112 293-416 10-156 (162)
35 1dx5_I Thrombomodulin; serine 98.6 5.4E-09 1.8E-13 91.4 0.7 95 351-466 3-110 (118)
36 1aut_L Activated protein C; se 98.6 4.1E-08 1.4E-12 85.2 6.0 65 351-417 5-88 (114)
37 1dx5_I Thrombomodulin; serine 98.6 5.4E-09 1.9E-13 91.4 0.3 50 364-415 53-111 (118)
38 2c4f_L Coagulation factor VII 98.6 1.9E-08 6.5E-13 90.7 3.6 76 350-425 45-135 (142)
39 1emn_A Fibrillin; extracellula 98.6 6E-08 2.1E-12 79.3 5.5 65 350-416 3-77 (82)
40 1nfu_B Coagulation factor XA, 98.5 1.7E-08 5.8E-13 96.1 1.8 72 347-421 38-123 (195)
41 2vh0_B Activated factor XA lig 98.5 3.5E-08 1.2E-12 88.2 2.1 76 347-425 38-127 (134)
42 1klo_A Laminin; glycoprotein; 98.4 5.6E-08 1.9E-12 89.7 2.7 104 295-419 3-146 (162)
43 1lmj_A Fibrillin 1; EGF, calci 98.4 1E-07 3.5E-12 78.5 3.5 63 351-415 2-79 (86)
44 2wg3_C Hedgehog-interacting pr 98.4 2.4E-08 8.1E-13 107.0 -0.5 77 305-385 378-456 (463)
45 1z6c_A Vitamin K-dependent pro 98.4 1.6E-07 5.4E-12 77.6 3.5 65 351-419 2-78 (87)
46 4aqs_A Laminin subunit beta-1; 98.3 1.8E-07 6.1E-12 101.5 3.6 85 333-418 416-524 (525)
47 3h5c_B Vitamin K-dependent pro 98.3 8.7E-07 3E-11 89.4 7.0 63 351-415 4-76 (317)
48 3u7u_G Neuregulin 1; signaling 98.1 1.9E-06 6.6E-11 65.3 4.1 39 384-422 8-52 (55)
49 2w2n_E LDL receptor, low-densi 98.1 8.2E-07 2.8E-11 76.4 1.8 71 339-415 18-100 (107)
50 1uzk_A Fibrillin-1; glycoprote 98.0 6E-07 2E-11 82.3 -0.1 117 324-466 10-154 (162)
51 1edm_B Factor IX; epidermal gr 98.0 4E-06 1.4E-10 58.5 4.2 36 384-419 3-39 (39)
52 2w86_A Fibrillin-1, fibrillin1 97.9 3.8E-07 1.3E-11 82.2 -4.3 45 404-465 88-138 (147)
53 1x7a_L Coagulation factor IX, 97.8 1.4E-05 4.9E-10 72.3 5.0 67 383-465 47-116 (146)
54 1aut_L Activated protein C; se 97.8 1.8E-05 6.3E-10 68.3 5.3 66 387-465 18-84 (114)
55 2c4f_L Coagulation factor VII 97.8 1.7E-05 5.7E-10 71.3 4.7 68 383-465 46-119 (142)
56 1emn_A Fibrillin; extracellula 97.8 1.8E-05 6.3E-10 64.3 4.2 64 384-465 5-74 (82)
57 1nfu_B Coagulation factor XA, 97.7 5.2E-06 1.8E-10 78.9 0.8 73 377-465 35-111 (195)
58 3u7u_G Neuregulin 1; signaling 97.7 1.1E-05 3.7E-10 61.2 2.2 40 345-384 1-49 (55)
59 3ca7_A Protein spitz; argos, E 97.7 3.8E-06 1.3E-10 62.8 -0.6 42 370-420 4-49 (52)
60 1a3p_A Epidermal growth factor 97.7 3.2E-05 1.1E-09 55.8 4.2 32 390-421 10-43 (45)
61 3h5c_B Vitamin K-dependent pro 97.7 3.6E-05 1.2E-09 77.5 6.0 65 384-465 5-74 (317)
62 1egf_A Epidermal growth factor 97.7 3.2E-05 1.1E-09 57.9 4.1 38 384-421 3-46 (53)
63 2w2n_E LDL receptor, low-densi 97.7 1.4E-05 4.8E-10 68.6 2.0 73 373-465 18-98 (107)
64 1lmj_A Fibrillin 1; EGF, calci 97.6 1.5E-05 5.3E-10 65.3 2.2 69 384-465 3-77 (86)
65 3tbd_A Netrin-G2, laminet-2; l 97.6 4.2E-06 1.4E-10 85.6 -2.2 74 110-211 85-161 (338)
66 1n7d_A LDL receptor, low-densi 97.6 0.00024 8.1E-09 79.5 11.5 115 295-415 222-365 (699)
67 3p5b_L Low density lipoprotein 97.6 2.8E-05 9.5E-10 81.0 3.6 60 354-415 2-71 (400)
68 2vh0_B Activated factor XA lig 97.6 1.3E-05 4.5E-10 71.3 0.8 68 382-465 40-111 (134)
69 1n7d_A LDL receptor, low-densi 97.5 0.00026 8.9E-09 79.2 10.9 145 298-465 185-363 (699)
70 3m0c_C LDL receptor, low-densi 97.5 7.1E-05 2.4E-09 85.0 6.1 106 338-464 257-380 (791)
71 1z6c_A Vitamin K-dependent pro 97.5 2.6E-05 9E-10 64.1 1.6 59 384-461 3-69 (87)
72 3v65_B Low-density lipoprotein 97.5 2E-05 7E-10 81.5 1.1 66 351-418 2-82 (386)
73 2k2s_B Micronemal protein 6; m 97.4 3.2E-05 1.1E-09 59.8 1.4 37 384-420 11-51 (61)
74 2p26_A Integrin beta-2; hybrid 97.4 0.00021 7.3E-09 71.4 7.1 74 242-318 144-221 (280)
75 1hae_A Heregulin-alpha; growth 97.3 0.0002 7E-09 55.3 4.8 35 388-422 11-50 (63)
76 1k36_A Epiregulin; EGF-like fo 97.3 0.00011 3.9E-09 53.4 2.9 31 389-420 12-44 (46)
77 3m0c_C LDL receptor, low-densi 97.2 0.00028 9.7E-09 80.1 6.6 78 335-414 295-382 (791)
78 1nql_B Epidermal growth factor 97.2 0.00013 4.5E-09 54.7 2.4 34 388-421 11-46 (53)
79 1klo_A Laminin; glycoprotein; 97.1 0.00011 3.9E-09 67.5 1.7 66 299-383 68-145 (162)
80 1edm_B Factor IX; epidermal gr 97.1 0.0003 1E-08 48.8 3.3 33 351-383 2-38 (39)
81 1g1s_A P-selectin; selectin, l 96.8 0.00044 1.5E-08 62.5 2.0 39 382-420 117-156 (162)
82 3p5b_L Low density lipoprotein 96.6 0.0011 3.7E-08 68.9 3.9 63 385-465 1-69 (400)
83 2p26_A Integrin beta-2; hybrid 96.6 0.00073 2.5E-08 67.6 2.2 52 326-377 198-262 (280)
84 2ygo_A WIF-1, WNT inhibitory f 96.6 0.0014 4.8E-08 61.4 4.0 32 385-419 149-180 (188)
85 1egf_A Epidermal growth factor 96.4 0.0019 6.6E-08 48.0 3.2 33 352-384 3-44 (53)
86 2e26_A Reelin, reeler protein; 96.3 0.0007 2.4E-08 75.2 0.6 43 372-418 521-564 (725)
87 3ltf_D Protein spitz; receptor 96.3 0.0014 4.7E-08 50.0 2.0 31 390-420 15-49 (58)
88 2ygo_A WIF-1, WNT inhibitory f 96.3 0.0023 7.7E-08 60.0 3.8 34 286-319 146-180 (188)
89 1k36_A Epiregulin; EGF-like fo 96.1 0.0023 7.8E-08 46.4 2.1 32 352-384 3-43 (46)
90 3zyj_B Netrin-G1; cell adhesio 96.1 0.0027 9.1E-08 66.9 3.2 89 305-409 325-417 (426)
91 3cfw_A L-selectin; EGF, cell a 96.0 0.0032 1.1E-07 56.9 3.2 39 382-420 117-156 (164)
92 3ca7_A Protein spitz; argos, E 96.0 0.0006 2E-08 50.7 -1.6 27 358-384 14-48 (52)
93 3v65_B Low-density lipoprotein 95.9 0.0018 6.2E-08 66.7 0.9 64 384-465 3-73 (386)
94 1a3p_A Epidermal growth factor 95.8 0.0053 1.8E-07 43.9 3.0 31 354-384 2-41 (45)
95 1q4g_A Prostaglandin G/H synth 95.8 0.0039 1.3E-07 68.0 3.0 37 385-421 3-42 (553)
96 2fd6_A Urokinase-type plasmino 95.7 0.0047 1.6E-07 54.0 2.7 56 359-420 2-64 (122)
97 2e26_A Reelin, reeler protein; 95.6 0.002 6.7E-08 71.7 -0.1 43 307-349 521-564 (725)
98 1hae_A Heregulin-alpha; growth 95.5 0.0027 9.1E-08 48.9 0.4 31 353-383 7-46 (63)
99 3nt1_A Prostaglandin-endoperox 95.4 0.0079 2.7E-07 65.9 3.6 36 385-420 2-40 (587)
100 1g1t_A E-selectin; EGF, adhesi 95.4 0.0047 1.6E-07 55.2 1.5 39 382-420 117-156 (157)
101 2k2s_B Micronemal protein 6; m 95.2 0.0035 1.2E-07 48.3 0.2 34 351-384 10-50 (61)
102 2fd6_A Urokinase-type plasmino 95.1 0.021 7.1E-07 49.8 4.9 37 390-426 2-41 (122)
103 3t3p_B Integrin beta-3; integr 94.8 0.055 1.9E-06 57.6 7.8 76 241-318 390-472 (472)
104 1apq_A Complement protease C1R 94.6 0.024 8.1E-07 41.5 3.2 25 389-415 20-44 (53)
105 1gl4_A Nidogen-1, entactin; im 94.1 0.013 4.4E-07 58.5 1.3 32 384-415 5-39 (285)
106 2ddu_A Reelin; beta-jelly-roll 94.0 0.01 3.4E-07 61.6 0.2 32 288-319 191-224 (387)
107 2i9a_A Urokinase-type plasmino 93.9 0.03 1E-06 50.4 3.1 55 359-420 14-76 (145)
108 1nql_B Epidermal growth factor 93.9 0.02 6.7E-07 42.7 1.6 29 292-320 11-45 (53)
109 2kl7_A Fibulin-4; secreted, ca 93.8 0.035 1.2E-06 43.8 3.0 25 389-413 11-36 (71)
110 1ob1_C Major merozoite surface 93.3 0.067 2.3E-06 45.0 3.9 64 355-418 7-93 (99)
111 1iox_A Betacellulin; EGF-like 93.0 0.054 1.9E-06 39.9 2.7 31 389-420 14-46 (50)
112 2i9a_A Urokinase-type plasmino 92.6 0.072 2.5E-06 47.9 3.4 37 390-426 14-53 (145)
113 2y38_A Laminin subunit alpha-5 92.5 0.16 5.5E-06 53.1 6.4 52 294-364 267-331 (403)
114 1g1s_A P-selectin; selectin, l 92.1 0.042 1.4E-06 49.3 1.2 34 354-387 121-159 (162)
115 2jkh_L Factor X light chain; p 92.1 0.07 2.4E-06 39.7 2.3 22 390-413 10-31 (55)
116 2rnl_A Amphiregulin; AR, color 92.0 0.13 4.5E-06 37.8 3.6 30 389-419 18-49 (50)
117 3ltf_D Protein spitz; receptor 91.6 0.083 2.8E-06 40.0 2.2 26 294-319 15-48 (58)
118 1xdt_R Hbegf, heparin-binding 91.5 0.094 3.2E-06 42.4 2.5 30 389-419 46-77 (79)
119 3e50_C Protransforming growth 91.1 0.14 4.8E-06 37.7 2.9 31 389-420 14-46 (50)
120 1q4g_A Prostaglandin G/H synth 91.0 0.07 2.4E-06 58.1 1.8 33 352-384 2-40 (553)
121 3asi_A Neurexin-1-alpha; beta- 90.4 0.16 5.6E-06 52.5 3.8 36 385-420 186-223 (410)
122 3nt1_A Prostaglandin-endoperox 88.3 0.17 5.8E-06 55.4 2.2 31 353-383 2-38 (587)
123 3cfw_A L-selectin; EGF, cell a 88.0 0.17 5.8E-06 45.3 1.7 35 355-389 122-161 (164)
124 3v4v_B Integrin beta-7; cell a 88.0 0.26 8.9E-06 52.7 3.3 76 241-318 413-493 (503)
125 1kig_L Factor XA; glycoprotein 86.6 0.2 6.7E-06 36.7 1.0 18 396-413 11-28 (51)
126 1n1i_A Merozoite surface prote 86.4 0.78 2.7E-05 38.8 4.7 65 354-418 12-94 (105)
127 2ddu_A Reelin; beta-jelly-roll 84.9 0.19 6.5E-06 52.1 0.2 21 359-379 197-217 (387)
128 1kli_L Factor VIIA; extrinsic 84.0 0.59 2E-05 36.5 2.7 19 395-413 17-36 (69)
129 3qcw_A Neurexin-1-alpha; synap 83.6 0.63 2.1E-05 55.3 3.9 36 385-420 1018-1055(1245)
130 1szb_A Mannose binding lectin- 83.4 0.4 1.4E-05 43.3 1.7 21 391-413 137-157 (170)
131 2rnl_A Amphiregulin; AR, color 82.8 0.87 3E-05 33.4 3.0 26 293-319 18-49 (50)
132 1g1t_A E-selectin; EGF, adhesi 81.4 0.34 1.2E-05 42.8 0.4 31 354-384 121-155 (157)
133 2wph_E Coagulation factor IXA 81.1 1.1 3.6E-05 33.8 3.0 19 395-413 11-30 (59)
134 2bz6_L Blood coagulation facto 81.0 0.68 2.3E-05 34.1 1.9 18 396-413 12-30 (53)
135 3e50_C Protransforming growth 80.8 0.88 3E-05 33.4 2.4 16 304-319 30-45 (50)
136 3qcw_A Neurexin-1-alpha; synap 80.5 0.83 2.8E-05 54.2 3.4 36 385-420 620-657 (1245)
137 1iox_A Betacellulin; EGF-like 80.5 0.59 2E-05 34.2 1.3 26 293-319 14-45 (50)
138 3asi_A Neurexin-1-alpha; beta- 78.8 0.98 3.4E-05 46.6 3.0 33 352-384 185-222 (410)
139 1xdt_R Hbegf, heparin-binding 75.0 1.5 5.2E-05 35.2 2.4 26 293-319 46-77 (79)
140 3g5c_A ADAM 22; alpha/beta fol 74.4 1.2 4.2E-05 47.8 2.2 60 359-421 424-483 (510)
141 1nzi_A Complement C1S componen 74.0 1.6 5.6E-05 38.5 2.7 20 395-414 130-149 (159)
142 1apq_A Complement protease C1R 65.6 3 0.0001 29.9 2.0 28 351-380 3-44 (53)
143 3fl7_A Ephrin receptor; ATP-bi 64.9 3 0.0001 45.0 2.8 21 294-314 251-273 (536)
144 1gl4_A Nidogen-1, entactin; im 64.6 1.2 4.3E-05 44.2 -0.3 34 350-383 3-44 (285)
145 1ob1_C Major merozoite surface 63.5 12 0.00041 31.3 5.5 64 389-466 10-84 (99)
146 1n1i_A Merozoite surface prote 58.6 14 0.00047 31.2 5.0 61 390-465 17-84 (105)
147 3g5c_A ADAM 22; alpha/beta fol 56.6 4.6 0.00016 43.4 2.3 25 325-349 455-480 (510)
148 3fl7_A Ephrin receptor; ATP-bi 56.2 4 0.00014 44.0 1.8 68 325-414 251-320 (536)
149 4aqt_A Laminin subunit gamma-1 52.5 12 0.00042 38.4 4.7 20 185-209 137-156 (375)
150 1b9w_A Protein (merozoite surf 50.9 19 0.00066 29.7 4.6 58 355-412 7-78 (95)
151 2kl7_A Fibulin-4; secreted, ca 50.6 5.9 0.0002 30.8 1.5 56 351-415 2-64 (71)
152 1szb_A Mannose binding lectin- 49.7 2.6 8.7E-05 37.9 -0.9 13 152-164 57-69 (170)
153 3v64_C Agrin; beta propeller, 49.3 6.1 0.00021 39.4 1.8 23 389-413 8-30 (349)
154 1zlg_A Anosmin 1; insulin-like 46.1 14 0.00048 40.4 4.2 30 294-326 53-82 (680)
155 3t3p_B Integrin beta-3; integr 44.7 8.7 0.0003 40.8 2.1 26 324-349 446-472 (472)
156 3fby_A COMP, cartilage oligome 37.4 17 0.00059 39.1 3.0 27 389-415 27-54 (551)
157 1cmr_A Charybdotoxin, alpha ch 37.1 17 0.00058 23.9 1.8 20 290-309 6-30 (31)
158 1jlz_A Tityustoxin alpha-KTX; 35.9 7.5 0.00026 24.6 -0.0 18 293-310 7-24 (26)
159 3v4v_B Integrin beta-7; cell a 33.0 9.1 0.00031 40.9 0.0 27 324-350 467-494 (503)
160 3t5o_A Complement component C6 32.4 23 0.00077 40.6 3.1 25 359-383 504-532 (913)
161 3f1s_B Vitamin K-dependent pro 32.3 19 0.00065 34.8 2.2 19 395-413 15-33 (283)
162 3t5o_A Complement component C6 31.4 77 0.0026 36.2 7.4 34 325-360 504-541 (913)
163 1wz5_A Potassium channel block 29.8 13 0.00046 25.1 0.4 23 289-311 8-35 (35)
164 1bah_A Charybdotoxin, chabii; 20.7 21 0.00073 24.4 0.0 22 288-309 10-36 (37)
No 1
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.80 E-value=5.7e-20 Score=188.58 Aligned_cols=158 Identities=31% Similarity=0.826 Sum_probs=83.7
Q ss_pred cCCCCCCCCCCcEEe-CCeEecCCCCcCCCCCCCCCCCCCCCCCeec-CceeecCCCCCCCCCCCCCCCCCCCCCCCCce
Q psy12789 288 SSTCPNGCSGHGSCY-LGKCDCIDGYEGTDCSKSVCPVLCSNHGKYG-GGICHCENGWKGPECDIPASDCQYSDCSGHGS 365 (514)
Q Consensus 288 ~~~Cp~~C~~~G~C~-~g~C~C~~Gf~G~~Ce~~~C~~~C~~~G~c~-~~~C~C~~G~~G~~Ce~~i~eC~~~~C~~~G~ 365 (514)
...|++.|.++|.|. .+.|.|.+||+|..|+...|...|.++|.|. .+.|.|.+||.|..|+. ..|. .+|.++|+
T Consensus 148 ~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~--~~C~-~~C~~~G~ 224 (324)
T 2ygq_A 148 QAECPGGCRNGGFCNERRICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDK--ANCS-TTCFNGGT 224 (324)
T ss_dssp CCCCSSCCCSSCEECTTSCEECCTTEESSSSCEESSSSCCCTTCEECSSCCEECCTTCBTTTTCB--CCCS-SCCCSSCC
T ss_pred CCCCCCCCCCCCEECCCCeEECCCCCcCCCCCCCCCCCCCCCCCEEcCCCEEeCCCCccCCCccc--CcCC-CCCCCCCe
Confidence 468999999999998 4899999999999999888988999999995 58999999999999975 3574 68999999
Q ss_pred eeC-CceecCCCCCccccCCCCCCCCCCCCCeeeccCCceeeecCCCcccCCCCccccCCCCCCCCCCCCCCCCCCCCCC
Q psy12789 366 CVE-GTCHCQSGWKGIGCQEAGCPNACNRHGTCAFENEEYQCVCAEGWAGVDCNIKLEMSCNDDTDNDKDGVTDCSDSDC 444 (514)
Q Consensus 366 C~~-~~C~C~~Gy~G~~C~~~~C~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~~~~C~d~~~~d~~g~~eC~d~~C 444 (514)
|+. +.|.|++||+|..|+++.|..+|.++|+|.. .+.|.|++||+|..|+.. .|. .+|
T Consensus 225 C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~---~~~C~C~~G~~G~~C~~~-----------------~C~-~~C 283 (324)
T 2ygq_A 225 CFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIG---KSKCKCSKGYQGDLCSKP-----------------VCE-PGC 283 (324)
T ss_dssp BSCSSCBCCCTTCCTTTTC-------------------------------------------------------------
T ss_pred eCCCCeeeCCCCccCCCCCcCcCCCcCCCCCEECC---CCEEECCCCCcCCCCcCC-----------------CCC-CCC
Confidence 986 6999999999999999999999999999984 469999999999999843 343 457
Q ss_pred CCCCeEecCCCceeecCCCCceeeccc
Q psy12789 445 CSQPVCSDQPHIMCLASNDPVEVLLRK 471 (514)
Q Consensus 445 ~~~~~C~n~~g~~C~~~~~p~~~~l~~ 471 (514)
..+++|.+ ...|.+..+........
T Consensus 284 ~~~g~C~~--~~~C~C~~G~~G~~C~~ 308 (324)
T 2ygq_A 284 GAHGTCHE--PNKCQCQEGWHGRHCNK 308 (324)
T ss_dssp ---------------------------
T ss_pred CCCCEECC--CCEeECCCCCcCCCCCC
Confidence 78888887 45677777766555543
No 2
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.79 E-value=8.8e-19 Score=195.28 Aligned_cols=174 Identities=28% Similarity=0.603 Sum_probs=137.9
Q ss_pred cCCCeeeEEEEEEEEEeecCCeEEEeEecCCcc---eeEEEEEEeccccccCCCCC--CCC-CCcEEeCCeEecCCCCcC
Q psy12789 241 SDQTTETNFVEVQILKFLMSGKWFLSVYNDDVK---THEIKLLIKEAEGVSSTCPN--GCS-GHGSCYLGKCDCIDGYEG 314 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~G~~~l~~~nd~~~---~~~v~~~~~~~~~~~~~Cp~--~C~-~~G~C~~g~C~C~~Gf~G 314 (514)
.+|..++|.+++....+...+...+.+..-+.. ...+.+.+. +++...+|.+ .|. ++|.|..|.|.|.+||.|
T Consensus 390 ~~g~~v~F~v~v~~~~Cp~~~~~~~~i~p~G~~e~l~v~v~~~C~-C~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G 468 (690)
T 3fcs_B 390 KIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCD-CACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLG 468 (690)
T ss_dssp CTTCEEEEEEEEEECSCCSSSEEEEEEEETTCSCCEEEEEEECCS-CGGGTTCCTTCTTTTTTSEEEETTEEEECTTCCS
T ss_pred ccCCeEEEEEEEEeecCCCCCceEEEEeecCCccceeeecccccc-cCCcCCCCCCCCcccCCCCeEeCCceEeCCCccC
Confidence 356778899999888887555444433222221 122333333 4666777865 688 899999999999999999
Q ss_pred CCCCCCC----------CCC-----CCCCCCeecCceeecC----CCCCCCCCCCCCCCCCC---CCCCCCceeeCCcee
Q psy12789 315 TDCSKSV----------CPV-----LCSNHGKYGGGICHCE----NGWKGPECDIPASDCQY---SDCSGHGSCVEGTCH 372 (514)
Q Consensus 315 ~~Ce~~~----------C~~-----~C~~~G~c~~~~C~C~----~G~~G~~Ce~~i~eC~~---~~C~~~G~C~~~~C~ 372 (514)
..|+... |.. .|.++|.|..+.|.|. +||.|..|+.+.+.|.. .+|.++|+|.++.|.
T Consensus 469 ~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~g~C~ 548 (690)
T 3fcs_B 469 SQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCL 548 (690)
T ss_dssp SSSCCSCC------CCCCSSSSSSCGGGGSEEECSSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEETTEEE
T ss_pred CceeeccCccCCccCCcCCCCCCCCCCCCCCEEECCeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecCCeeE
Confidence 9997543 753 4999999999999999 99999999888888974 479999999999999
Q ss_pred cCCCCCccccC----CCCCC----CCCCCCCeeeccCCceeeec-CCCcccCCCCc
Q psy12789 373 CQSGWKGIGCQ----EAGCP----NACNRHGTCAFENEEYQCVC-AEGWAGVDCNI 419 (514)
Q Consensus 373 C~~Gy~G~~C~----~~~C~----~~C~~~G~C~~~~Gsy~C~C-~~Gy~G~~Ce~ 419 (514)
|.+||+|..|+ .+.|. .+|.++|+|.+. .|.| .+||+|..|+.
T Consensus 549 C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~g----~C~C~~~Gy~G~~Ce~ 600 (690)
T 3fcs_B 549 CDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG----SCVCIQPGSYGDTCEK 600 (690)
T ss_dssp ECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEETT----EEECCSTTCBSTTSCB
T ss_pred CcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeCC----EEECCCCCccCCCcCc
Confidence 99999999998 67885 579999999762 9999 99999999986
No 3
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.73 E-value=3.8e-18 Score=189.87 Aligned_cols=173 Identities=27% Similarity=0.599 Sum_probs=132.1
Q ss_pred cCCCeeeEEEEEEEEEeecCCeEEEeE--ecCCcceeEEEEEEeccccccC-CCCCCCCCCcEEeCCeEecCCCCcCCCC
Q psy12789 241 SDQTTETNFVEVQILKFLMSGKWFLSV--YNDDVKTHEIKLLIKEAEGVSS-TCPNGCSGHGSCYLGKCDCIDGYEGTDC 317 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~G~~~l~~--~nd~~~~~~v~~~~~~~~~~~~-~Cp~~C~~~G~C~~g~C~C~~Gf~G~~C 317 (514)
.+|..++|.++++...+...+...+.. +++.+. ..+.+.+. +.+... .-++.|+++|.|..+.|.|.+||.|..|
T Consensus 382 ~ig~~v~F~v~v~~~~Cp~~~~~~i~p~Gf~~~~~-v~~~~~C~-C~C~~~~~~s~~Cs~~G~C~~g~C~C~~Gy~G~~C 459 (687)
T 3k6s_B 382 QINVPITFQVKVTATECIQEQSFVIRALGFTDIVT-VQVLPQCE-CRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNC 459 (687)
T ss_dssp CSSCCEEEEEEEEESSCCCSEEEEBCCTTCCCCCE-EEEEECCC-CCCCCSSSCSSTGGGSEEESSSSEEECSSEESTTS
T ss_pred ecCCeEEEEEEEEEecCCCCCeEEEccccCCCcee-cccccccc-ccCccCCCCCCCCCCCCEEeCCEeEcCCCCcCCcc
Confidence 356778899999888887644332222 222222 33334333 122111 1356799999999999999999999999
Q ss_pred CCC-----------CCCC-----CCCCCCeecCceeecC------CCCCCCCCCCCCCCCCC---CCCCC--CceeeCCc
Q psy12789 318 SKS-----------VCPV-----LCSNHGKYGGGICHCE------NGWKGPECDIPASDCQY---SDCSG--HGSCVEGT 370 (514)
Q Consensus 318 e~~-----------~C~~-----~C~~~G~c~~~~C~C~------~G~~G~~Ce~~i~eC~~---~~C~~--~G~C~~~~ 370 (514)
+.. .|.. .|+++|.|..+.|.|. +||.|..|+.+...|.. .+|.+ +|+|..+.
T Consensus 460 ec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g~ 539 (687)
T 3k6s_B 460 ECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGK 539 (687)
T ss_dssp CEESSSCCCSGGGSTTSSSTTSCGGGSSEEEETTEEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEETTE
T ss_pred cccCCcCCccccCCCCCCCCCCCcCCCCCEEeCCEEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEECCE
Confidence 821 3642 4899999999999999 99999999877778863 36998 99999999
Q ss_pred eecCCCCCccccC----CCCCCC----CCCCCCeeeccCCceeeecCCCcccCCCCc
Q psy12789 371 CHCQSGWKGIGCQ----EAGCPN----ACNRHGTCAFENEEYQCVCAEGWAGVDCNI 419 (514)
Q Consensus 371 C~C~~Gy~G~~C~----~~~C~~----~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~ 419 (514)
|.|.+||+|..|+ .+.|.. +|+++|+|.. +.|.|.+||+|..|+.
T Consensus 540 C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 540 CRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC----NVCECHSGYQLPLCQE 592 (687)
T ss_dssp EEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS----SCBCCSTTCCTTTTCC
T ss_pred EEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC----CEEECCCCCcCCCCCC
Confidence 9999999999998 467853 6999999986 3899999999999986
No 4
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.69 E-value=1.1e-17 Score=171.52 Aligned_cols=127 Identities=35% Similarity=0.931 Sum_probs=55.1
Q ss_pred CCCCCCCCCCcEEeC-CeEecCCCCcCCCCCCCCCCCCCCCCCeec-CceeecCCCCCCCCCCCCCCCCCCCCCCCCcee
Q psy12789 289 STCPNGCSGHGSCYL-GKCDCIDGYEGTDCSKSVCPVLCSNHGKYG-GGICHCENGWKGPECDIPASDCQYSDCSGHGSC 366 (514)
Q Consensus 289 ~~Cp~~C~~~G~C~~-g~C~C~~Gf~G~~Ce~~~C~~~C~~~G~c~-~~~C~C~~G~~G~~Ce~~i~eC~~~~C~~~G~C 366 (514)
..|.+.|.++|.|.. +.|.|++||+|..|+...|...|.++|.|. .+.|.|++||.|..|+ +++|. .+|.++|+|
T Consensus 181 ~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~--~~~C~-~~C~~~g~C 257 (324)
T 2ygq_A 181 ALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCE--ISKCP-QPCRNGGKC 257 (324)
T ss_dssp ESSSSCCCTTCEECSSCCEECCTTCBTTTTCBCCCSSCCCSSCCBSCSSCBCCCTTCCTTTTC-----------------
T ss_pred CCCCCCCCCCCEEcCCCEEeCCCCccCCCcccCcCCCCCCCCCeeCCCCeeeCCCCccCCCCC--cCcCC-CcCCCCCEE
Confidence 357778999999985 899999999999999888999999999984 5899999999999997 45674 689999999
Q ss_pred eC-CceecCCCCCccccCCCCCCCCCCCCCeeeccCCceeeecCCCcccCCCCccc
Q psy12789 367 VE-GTCHCQSGWKGIGCQEAGCPNACNRHGTCAFENEEYQCVCAEGWAGVDCNIKL 421 (514)
Q Consensus 367 ~~-~~C~C~~Gy~G~~C~~~~C~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~ 421 (514)
.. +.|.|++||+|..|+.+.|...|.++|+|.+ .+.|.|.+||+|..|+...
T Consensus 258 ~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~---~~~C~C~~G~~G~~C~~~~ 310 (324)
T 2ygq_A 258 IGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHE---PNKCQCQEGWHGRHCNKRY 310 (324)
T ss_dssp --------------------------------------------------------
T ss_pred CCCCEEECCCCCcCCCCcCCCCCCCCCCCCEECC---CCEeECCCCCcCCCCCCCC
Confidence 86 6999999999999999999989999999986 3699999999999998764
No 5
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.62 E-value=2.3e-16 Score=147.02 Aligned_cols=121 Identities=38% Similarity=0.983 Sum_probs=103.5
Q ss_pred CCCCCcEEe-CCeEecCCCCcCCCCCCCCCCCCCC-CCCeec-CceeecCCCCCCCCCCCCCCCCCCCC-CCCCceeeC-
Q psy12789 294 GCSGHGSCY-LGKCDCIDGYEGTDCSKSVCPVLCS-NHGKYG-GGICHCENGWKGPECDIPASDCQYSD-CSGHGSCVE- 368 (514)
Q Consensus 294 ~C~~~G~C~-~g~C~C~~Gf~G~~Ce~~~C~~~C~-~~G~c~-~~~C~C~~G~~G~~Ce~~i~eC~~~~-C~~~G~C~~- 368 (514)
.|.++|.|. .+.|.|.+||+|..|+...|...|. .+|.|. .+.|.|++||.|..|+ +|...+ |. +|+|+.
T Consensus 39 ~c~~~g~C~~~g~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~~~~C~C~~G~~G~~C~----~C~~~~~C~-~g~C~~~ 113 (169)
T 2vj2_A 39 DFFGHYACDQNGNKTCMEGWMGPECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCD----KCIPHPGCV-HGICNEP 113 (169)
T ss_dssp ETTEEEEECSSCCEEECTTEESTTSCEECCCTTCCTTTEECSSTTCCEECTTEESSSSC----EECCCTTCS-SEECSST
T ss_pred CcCCCCEeCCCCeeECCCCCcCCCCCCCCCCCCCCCCCcccCCCCeeECCCCCCCCCcc----cCCCCCCCC-CCCcCCC
Confidence 588899996 6899999999999999888888887 677774 6899999999999996 355555 76 568985
Q ss_pred CceecCCCCCccccC--CCCCC--CCCCCCCeeecc-CCceeeecCCCcccCCCCc
Q psy12789 369 GTCHCQSGWKGIGCQ--EAGCP--NACNRHGTCAFE-NEEYQCVCAEGWAGVDCNI 419 (514)
Q Consensus 369 ~~C~C~~Gy~G~~C~--~~~C~--~~C~~~G~C~~~-~Gsy~C~C~~Gy~G~~Ce~ 419 (514)
+.|.|++||+|..|+ +++|. .+|.++|+|++. .++|+|.|++||+|..|++
T Consensus 114 ~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 114 WQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp TCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred CEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence 699999999999997 56783 789999999996 7889999999999999973
No 6
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.59 E-value=1.8e-15 Score=168.69 Aligned_cols=119 Identities=34% Similarity=0.795 Sum_probs=106.8
Q ss_pred CCCCCcEEeCCeEecC----CCCcCCCCC--CCCCC----CCCCCCCeecCceeecCCCCCCCCCC--CCCCCCCC---C
Q psy12789 294 GCSGHGSCYLGKCDCI----DGYEGTDCS--KSVCP----VLCSNHGKYGGGICHCENGWKGPECD--IPASDCQY---S 358 (514)
Q Consensus 294 ~C~~~G~C~~g~C~C~----~Gf~G~~Ce--~~~C~----~~C~~~G~c~~~~C~C~~G~~G~~Ce--~~i~eC~~---~ 358 (514)
.|+++|.|..+.|.|. +||.|..|+ ...|. ..|.++|.|..+.|.|.+||.|..|+ .+++.|.. .
T Consensus 494 ~Cs~~G~C~~g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~ 573 (690)
T 3fcs_B 494 VCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGL 573 (690)
T ss_dssp GGGGSEEECSSSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEETTEEEECTTEESSSSCEECCCTTTBCTTSS
T ss_pred CCCCCCEEECCeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecCCeeECcCCCcCCCCccCCCCCcccCCCCC
Confidence 4999999999999999 999999997 45686 36999999999999999999999998 55778875 5
Q ss_pred CCCCCceeeCCceec-CCCCCccccCC-CCCCCCCCCCCeeeccCCceeeecCCCcccCCCCcc
Q psy12789 359 DCSGHGSCVEGTCHC-QSGWKGIGCQE-AGCPNACNRHGTCAFENEEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 359 ~C~~~G~C~~~~C~C-~~Gy~G~~C~~-~~C~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
+|.++|+|.++.|.| .+||.|..|+. ..|+++|.++|.|++ |..||+|..|+..
T Consensus 574 ~C~~~G~C~~g~C~C~~~Gy~G~~Ce~C~~C~~~C~~~g~Cv~--------C~~g~tG~~C~~~ 629 (690)
T 3fcs_B 574 LCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVE--------CKKFDRGALHDEN 629 (690)
T ss_dssp BTSSSCEEETTEEECCSTTCBSTTSCBCTTSCCTTTSCCGGGT--------TTTTCCSSSSSSS
T ss_pred CCCCCCEEeCCEEECCCCCccCCCcCcCCCCCCCCCCCCCccc--------CCCCCccCCCCcc
Confidence 799999999999999 99999999998 778999999999985 9999999988753
No 7
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.58 E-value=3.1e-16 Score=147.86 Aligned_cols=129 Identities=25% Similarity=0.581 Sum_probs=106.5
Q ss_pred CCCCCCCcEEeC----CeEecCCCCcCC---CCC-CCCCC-----CCCCCCCee---------cCceeecCCCCCCCCCC
Q psy12789 292 PNGCSGHGSCYL----GKCDCIDGYEGT---DCS-KSVCP-----VLCSNHGKY---------GGGICHCENGWKGPECD 349 (514)
Q Consensus 292 p~~C~~~G~C~~----g~C~C~~Gf~G~---~Ce-~~~C~-----~~C~~~G~c---------~~~~C~C~~G~~G~~Ce 349 (514)
+++|. ||+|++ +.|.|++||+|. .|+ ...|. .+|.+++.| ++|.|.|++||.|..+.
T Consensus 10 ~~pC~-ng~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~ 88 (186)
T 1z1y_A 10 DTICX-NGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDT 88 (186)
T ss_dssp TCCCB-TEEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTE
T ss_pred CCCCC-CCEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCC
Confidence 45676 679983 689999999987 785 35574 357777776 46789999999988654
Q ss_pred CCCCCCCCCCCCCCceee----C----CceecCCCCCc-----cccC---CCCCCCCC-CCCCeeeccCCceeeecCCCc
Q psy12789 350 IPASDCQYSDCSGHGSCV----E----GTCHCQSGWKG-----IGCQ---EAGCPNAC-NRHGTCAFENEEYQCVCAEGW 412 (514)
Q Consensus 350 ~~i~eC~~~~C~~~G~C~----~----~~C~C~~Gy~G-----~~C~---~~~C~~~C-~~~G~C~~~~Gsy~C~C~~Gy 412 (514)
..+++|...+|.++|+|+ + +.|.|++||+| ..|+ +++|.++| .++++|++..|+|+|.|++||
T Consensus 89 C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~n~~g~y~C~C~~G~ 168 (186)
T 1z1y_A 89 CVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGF 168 (186)
T ss_dssp EEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCCCCCTTTEEEEEETTEEEEEECTTC
T ss_pred CCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccccccccCcceecCCCCeeeECCCCC
Confidence 447899988999999998 5 38999999998 7786 37898899 899999999999999999999
Q ss_pred ccCCCCccc
Q psy12789 413 AGVDCNIKL 421 (514)
Q Consensus 413 ~G~~Ce~~~ 421 (514)
+|..|+...
T Consensus 169 ~g~~~~~~~ 177 (186)
T 1z1y_A 169 TFDXEXNVC 177 (186)
T ss_dssp EEETTTTEE
T ss_pred ccCcccccC
Confidence 999988654
No 8
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.57 E-value=6.2e-15 Score=132.14 Aligned_cols=97 Identities=32% Similarity=0.947 Sum_probs=81.7
Q ss_pred CCCCCCee----cCceeecCCCCCCCCCCCCCCCCCCCCCCCCceeeCC----ceecCCCCCccccC--CCCC-CCCCCC
Q psy12789 325 LCSNHGKY----GGGICHCENGWKGPECDIPASDCQYSDCSGHGSCVEG----TCHCQSGWKGIGCQ--EAGC-PNACNR 393 (514)
Q Consensus 325 ~C~~~G~c----~~~~C~C~~G~~G~~Ce~~i~eC~~~~C~~~G~C~~~----~C~C~~Gy~G~~C~--~~~C-~~~C~~ 393 (514)
+|.++|.| +++.|.|++||.|..|+.++++|...+|.++++|++. .|.|++||+|..|+ +++| .++|.+
T Consensus 14 ~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~ 93 (135)
T 2vj3_A 14 PCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLH 93 (135)
T ss_dssp SSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECCTTTTCCSTT
T ss_pred CCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCCcccCCCcCC
Confidence 34444444 4568888888888888777889988899999999863 89999999999997 5788 478999
Q ss_pred CCeeeccCCceeeecCCCcccCCCCccc
Q psy12789 394 HGTCAFENEEYQCVCAEGWAGVDCNIKL 421 (514)
Q Consensus 394 ~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~ 421 (514)
+|+|++..++|.|.|++||+|..|++.+
T Consensus 94 ~g~C~~~~g~~~C~C~~G~~G~~C~~~i 121 (135)
T 2vj3_A 94 NGRCLDKINEFQCECPTGFTGHLCQVDL 121 (135)
T ss_dssp TCEEEECSSCEEEECCTTEESSSSCEEC
T ss_pred CCEeECCCCCeEEECCCCCcCCccCccC
Confidence 9999999999999999999999998654
No 9
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.48 E-value=6.7e-14 Score=125.85 Aligned_cols=111 Identities=32% Similarity=0.767 Sum_probs=87.6
Q ss_pred CCCCCCCcEEeC------CeEecCCCCcCCCCCCCCCCCCCCCCCeecCceeecCCCCCCCCCCCCCCCCCCCCCCCCce
Q psy12789 292 PNGCSGHGSCYL------GKCDCIDGYEGTDCSKSVCPVLCSNHGKYGGGICHCENGWKGPECDIPASDCQYSDCSGHGS 365 (514)
Q Consensus 292 p~~C~~~G~C~~------g~C~C~~Gf~G~~Ce~~~C~~~C~~~G~c~~~~C~C~~G~~G~~Ce~~i~eC~~~~C~~~G~ 365 (514)
+++|.++|.|+. +.|.|++||+|..|+.... + .. .+..| .++++|...+|.++|+
T Consensus 5 ~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~---~-------------~~--~~~~c-~~~~~C~~~~C~~~g~ 65 (143)
T 4d90_A 5 PNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVE---V-------------AS--DEEEP-TSAGPCTPNPCHNGGT 65 (143)
T ss_dssp SCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCC---C-------------TT--TTTSC-CCCCTTSSCCCCTTCE
T ss_pred CCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCcc---c-------------cc--ccccc-ccCCcCCCCCCCCCCE
Confidence 356888899973 4799999999998875321 0 00 11223 3467888889999999
Q ss_pred ee-------C----CceecCCCCCccccC--CCCC-CCCCCCCCeeeccCCceeeecCCCcccCCCCccc
Q psy12789 366 CV-------E----GTCHCQSGWKGIGCQ--EAGC-PNACNRHGTCAFENEEYQCVCAEGWAGVDCNIKL 421 (514)
Q Consensus 366 C~-------~----~~C~C~~Gy~G~~C~--~~~C-~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~ 421 (514)
|+ + +.|.|++||.|..|+ +++| .++|.++|+|++..++|.|.|++||+|..|+...
T Consensus 66 C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~~ 135 (143)
T 4d90_A 66 CEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYKG 135 (143)
T ss_dssp EEECCCEETTEECCEEEECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCBC-
T ss_pred ecCCCccccCCCCCeEeECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCceecC
Confidence 98 2 489999999999995 6889 4789999999999999999999999999998653
No 10
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.46 E-value=4.4e-14 Score=157.26 Aligned_cols=105 Identities=36% Similarity=0.885 Sum_probs=93.7
Q ss_pred CCCCCcEEeCCeEecC------CCCcCCCCC--CCCCCC----CCCC--CCeecCceeecCCCCCCCCCCCC--CCCCCC
Q psy12789 294 GCSGHGSCYLGKCDCI------DGYEGTDCS--KSVCPV----LCSN--HGKYGGGICHCENGWKGPECDIP--ASDCQY 357 (514)
Q Consensus 294 ~C~~~G~C~~g~C~C~------~Gf~G~~Ce--~~~C~~----~C~~--~G~c~~~~C~C~~G~~G~~Ce~~--i~eC~~ 357 (514)
.|+++|.|..+.|.|. +||.|..|+ ...|.. .|.+ +|.|..+.|.|.+||.|..|+.. .+.|..
T Consensus 483 ~Cs~~G~C~~G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g~C~C~~G~~G~~Cec~~~~~~C~~ 562 (687)
T 3k6s_B 483 ICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLN 562 (687)
T ss_dssp GGGSSEEEETTEEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEETTEEEECTTCCSTTSCSCCSSCTTBC
T ss_pred cCCCCCEEeCCEEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEECCEEEcCCCCcCCCCccCCCCCCCCC
Confidence 4999999999999999 999999998 567863 5988 89998899999999999999843 467865
Q ss_pred C---CCCCCceeeCCceecCCCCCccccCC-CCCCCCCCCCCeee
Q psy12789 358 S---DCSGHGSCVEGTCHCQSGWKGIGCQE-AGCPNACNRHGTCA 398 (514)
Q Consensus 358 ~---~C~~~G~C~~~~C~C~~Gy~G~~C~~-~~C~~~C~~~G~C~ 398 (514)
. +|.++|+|..+.|.|.+||+|..|+. ..|+++|.++|.|+
T Consensus 563 ~~g~~Cs~~G~C~~g~C~C~~Gy~G~~Ce~c~~C~~~C~~~g~Cv 607 (687)
T 3k6s_B 563 PRRVECSGRGRCRCNVCECHSGYQLPLCQECPGCPSPCGKYISCA 607 (687)
T ss_dssp TTCSBTSSSCCBCSSCBCCSTTCCTTTTCCCTTSCCCCTTTHHHH
T ss_pred CCCCCCCCCCcCCCCEEECCCCCcCCCCCCCCCCCcccCCCCCCC
Confidence 4 79999999999999999999999997 57999999999997
No 11
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.43 E-value=5e-14 Score=131.18 Aligned_cols=141 Identities=35% Similarity=0.819 Sum_probs=104.2
Q ss_pred CCeEecCCCCcCCCCCCCCCCC--CCCCCCee-cCceeecCCCCCCCCCCCCCCCCCCCCCC-CCceeeC-CceecCCCC
Q psy12789 303 LGKCDCIDGYEGTDCSKSVCPV--LCSNHGKY-GGGICHCENGWKGPECDIPASDCQYSDCS-GHGSCVE-GTCHCQSGW 377 (514)
Q Consensus 303 ~g~C~C~~Gf~G~~Ce~~~C~~--~C~~~G~c-~~~~C~C~~G~~G~~Ce~~i~eC~~~~C~-~~G~C~~-~~C~C~~Gy 377 (514)
.+.|.|.+||.|..|+. .|.. .|.+++.| ..+.|.|.+||.|..|+.+ .|. ..|. .+|.|++ +.|.|++||
T Consensus 16 ~~~c~C~~g~~G~~C~~-~C~~~~~c~~~g~C~~~g~C~C~~G~~G~~C~~~--~C~-~~C~~~~g~C~~~~~C~C~~G~ 91 (169)
T 2vj2_A 16 RSAVTCDDYYYGFGCNK-FCRPRDDFFGHYACDQNGNKTCMEGWMGPECNRA--ICR-QGCSPKHGSCKLPGDCRCQYGW 91 (169)
T ss_dssp -----CCTTEETTTTCE-ECCCEEETTEEEEECSSCCEEECTTEESTTSCEE--CCC-TTCCTTTEECSSTTCCEECTTE
T ss_pred CeeeeCCCcCcCCCccc-ccCCCCCcCCCCEeCCCCeeECCCCCcCCCCCCC--CCC-CCCCCCCcccCCCCeeECCCCC
Confidence 35799999999999974 4653 46667777 4678999999999999743 474 4576 6788985 699999999
Q ss_pred CccccCCCCCCCCCCCCCeeeccCCceeeecCCCcccCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCCCCeEecC-CC
Q psy12789 378 KGIGCQEAGCPNACNRHGTCAFENEEYQCVCAEGWAGVDCNIKLEMSCNDDTDNDKDGVTDCSD-SDCCSQPVCSDQ-PH 455 (514)
Q Consensus 378 ~G~~C~~~~C~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~~~~C~d~~~~d~~g~~eC~d-~~C~~~~~C~n~-~g 455 (514)
+|..|+.-.+...|. +|+|+ ++|.|.|++||+|..|+..+ ++|.. .+|.++++|.+. .+
T Consensus 92 ~G~~C~~C~~~~~C~-~g~C~---~~~~C~C~~G~~G~~C~~~~---------------~~C~~~~~C~~~g~C~~~~~~ 152 (169)
T 2vj2_A 92 QGLYCDKCIPHPGCV-HGICN---EPWQCLCETNWGGQLCDKDL---------------NYCGTHQPCLNGGTCSNTGPD 152 (169)
T ss_dssp ESSSSCEECCCTTCS-SEECS---STTCCEECTTEETTTTCEES---------------CHHHHTCCCCTTCEEEECSTT
T ss_pred CCCCcccCCCCCCCC-CCCcC---CCCEEeCCCCCCCCcccCCC---------------CCCCCCCCCCCCCEEcCCCCC
Confidence 999997522223476 46897 56899999999999998543 36664 689999999985 33
Q ss_pred -ceeecCCCCce
Q psy12789 456 -IMCLASNDPVE 466 (514)
Q Consensus 456 -~~C~~~~~p~~ 466 (514)
..|.+.+++..
T Consensus 153 ~~~C~C~~G~~G 164 (169)
T 2vj2_A 153 KYQCSCPEGYSG 164 (169)
T ss_dssp CEEEECCTTCCS
T ss_pred CcEeECCCCCcC
Confidence 57888776543
No 12
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=99.40 E-value=4e-13 Score=130.22 Aligned_cols=156 Identities=24% Similarity=0.470 Sum_probs=101.1
Q ss_pred cCCCeeeEEEEEEEEEeecCCeEEEeEecCCc-ceeEEEEEEe-ccccc-cCCCCCCCCCCcEEeCCeEecCCCCcCCCC
Q psy12789 241 SDQTTETNFVEVQILKFLMSGKWFLSVYNDDV-KTHEIKLLIK-EAEGV-SSTCPNGCSGHGSCYLGKCDCIDGYEGTDC 317 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~G~~~l~~~nd~~-~~~~v~~~~~-~~~~~-~~~Cp~~C~~~G~C~~g~C~C~~Gf~G~~C 317 (514)
.++..++|.+++.+..+... ..+.+..-+. ....|.+... +.++. ...-+..|+++|.|..+.|.|.+||+|..|
T Consensus 43 ~~g~~v~F~v~v~~~~Cp~~--~~~~i~p~g~~e~l~i~~~~~C~C~C~~~~~~~~~Csg~G~C~~g~C~C~~G~~G~~C 120 (217)
T 2p28_B 43 QINVPITFQVKVTATECIQE--QSFVIRALGFTDIVTVQVLPQCECRCRDQSRDRSLCHGKGFLECGICRCDTGYIGKNC 120 (217)
T ss_dssp CTTCCEEEEEEEEESSCCCS--EEEEEEETTCSCEEEEEEEECCCCCCCCCCC--CTTTTSEEEETTEEEECTTEESTTS
T ss_pred cCCCEEEEEEEEEeCCCCCC--CceEeeccCCcceEEEEecccccCCCCCCCCCCCccCCCceEECCEEECCCCccCCcc
Confidence 45667788888888888765 2233211121 1222222211 11111 112245799999999999999999999999
Q ss_pred CCCCCCCCCCCCCeecCceeecCCCCCCCCCCCCCCCCCCCCCCCCceeeCCceecCCC------CCccccC--CCCCCC
Q psy12789 318 SKSVCPVLCSNHGKYGGGICHCENGWKGPECDIPASDCQYSDCSGHGSCVEGTCHCQSG------WKGIGCQ--EAGCPN 389 (514)
Q Consensus 318 e~~~C~~~C~~~G~c~~~~C~C~~G~~G~~Ce~~i~eC~~~~C~~~G~C~~~~C~C~~G------y~G~~C~--~~~C~~ 389 (514)
+... ..... . + .+..|.. .+...+|.++|+|+.+.|.|.+| |+|..|+ ...|+.
T Consensus 121 ec~~---~~~~~-~-------~----~~~~C~~---~~~~~~Csg~G~C~~g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~ 182 (217)
T 2p28_B 121 ECQT---QGRSS-Q-------E----LEGSCRK---DNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCER 182 (217)
T ss_dssp CEEC---CCCC--G-------G----GGGGGBS---STTSCBGGGTEEEETTEEEECCCCSTTCCEESTTSCEESSCSCE
T ss_pred cccC---ccccc-c-------c----CCCcCCC---CCCCCCCCCCCEEeCCceECCCCCCCcccEECCCcccCCccCCC
Confidence 7321 10000 0 0 0122321 12246799999999999999999 5899998 567864
Q ss_pred ----CCCCC--CeeeccCCceeeecCCCcccCCCCcc
Q psy12789 390 ----ACNRH--GTCAFENEEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 390 ----~C~~~--G~C~~~~Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
+|+++ |+|.. + .|.|.+||+|..|+.+
T Consensus 183 ~~g~~C~~~~~G~C~~--g--~C~C~~G~~G~~C~~~ 215 (217)
T 2p28_B 183 YNGQVCGGPGRGLCFC--G--KCRCHPGFEGSACQHH 215 (217)
T ss_dssp ETTEETTCTTTEEEET--T--EEEECTTEESTTSCEE
T ss_pred CCCCCCCCCCCcEEeC--C--eeECCCCCccCCcCCC
Confidence 59988 99985 2 8999999999999865
No 13
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.36 E-value=1.5e-13 Score=144.49 Aligned_cols=240 Identities=19% Similarity=0.328 Sum_probs=94.0
Q ss_pred CcceecceeccccceeeEEeeecCCCCceeEeeccCCCCCcccceeEEEeeCccccccccccCCCCCCCCcce---ecCc
Q psy12789 111 SFQFWNSDFNIEQSAFFRFNFDLPRGSNFAVYGRRNVAPSITNYDFSEFIKDNTRTSAFFRFNFDLPRGSNFA---VYGR 187 (514)
Q Consensus 111 p~~fW~~~~~~~~p~~~~fn~tl~~~a~~~vygrr~~~ps~tqydf~Ell~G~~~~~~~~~~~~~~~~~~~~~---~~g~ 187 (514)
+.++|+|+-+...|.+..+||||.+++.| ||..-.. +.++..+|..+.++ .+|+
T Consensus 114 ~~twWQS~~~~~~~~p~~V~itLdL~~~f------------------~~t~~i~-----l~F~spRP~am~ierS~D~G~ 170 (426)
T 3zyj_B 114 PSTFWQSATWKEYPKPLQVNITLSWSKTI------------------ELTDNIV-----ITFESGRPDQMILEKSLDYGR 170 (426)
T ss_dssp -CCCEEBCCCCSCSSCCCEEEEEEEEEEE------------------EECSCEE-----EEESSCCCSEEEEEEESSTTS
T ss_pred CCceecCCcccCCCCccceeEEEcCCCcE------------------EEEEEEE-----eecCCCCCCeEEEEeccCCCC
Confidence 67999999999999999999999999998 2221111 11222223322222 3799
Q ss_pred cccCCCcCccceeeeeeCCcccCccccccccCC-------------------Ccceeee---------eccCcc------
Q psy12789 188 RNVAPSITNYDFSEFIKGGKINQKRSVDSILGH-------------------DDGVSFT---------SHISNQ------ 233 (514)
Q Consensus 188 ~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~~-------------------~~~~~~~---------~~~~~~------ 233 (514)
+|+ +|+|++......+++.+.....+.. +..++|. +|....
T Consensus 171 tW~-----p~qYfA~dC~~~Fg~~~~~~~~~~~~~~~~viCt~~yS~~~P~~~GeV~f~~~~~f~~~~gP~~~~~~~~y~ 245 (426)
T 3zyj_B 171 TWQ-----PYQYYATDCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIHFEIKDRFAFFAGPRLRNMASLYG 245 (426)
T ss_dssp SCE-----EEEEEESSHHHHTSCCCCCGGGCCSSCSSCCCEECTTTCSSSTTTTEEEECSHHHHHHHHCSSCCCHHHHHH
T ss_pred Cce-----ehHHHhhhhHHhcCCCcccccccCCCCCCcceeCCCCCCCCCCCCCEEEEEeccccccccCCCccccccccc
Confidence 998 8998887665556554321111100 1111111 111000
Q ss_pred --ccceeeccCCCeeeEEEEEEEEEeecCCeEEEeEecCCcceeEEEEEEeccccccCCCCCCCCCC-cEEeC----CeE
Q psy12789 234 --HHTLSKRSDQTTETNFVEVQILKFLMSGKWFLSVYNDDVKTHEIKLLIKEAEGVSSTCPNGCSGH-GSCYL----GKC 306 (514)
Q Consensus 234 --~~~~~~R~~~~~~~~~~~~~~~~~l~~G~~~l~~~nd~~~~~~v~~~~~~~~~~~~~Cp~~C~~~-G~C~~----g~C 306 (514)
.++..++.+ ++++...+++++... ...+.+........+.+.+.. +...| .|.+| ..|.. +.|
T Consensus 246 ~~~~S~~Lqd~-----~taT~iRi~l~r~~t--~~~~~~~~~~~~yyYAI~d~~-v~g~C--~CnGHas~C~~~~g~~~C 315 (426)
T 3zyj_B 246 QLDTTKKLRDF-----FTVTDLRIRLLRPAV--GEIFVDELHLARYFYAISDIK-VRGRC--KCNLHATVCVYDNSKLTC 315 (426)
T ss_dssp HHHHCHHHHHH-----SEEEEEEEEEEECCC--SSSSCCSSCGGGCCCEEEEEE-CEEEE--CCSSSCSCEEEETTEEEE
T ss_pred ccccCHHHHhh-----hcceeEEEEEecccc--CCccccccccceecceeeccc-ccccC--cCCCchhhcCCCCCCcee
Confidence 000111111 233333444443222 111223222233445555432 12233 37777 47762 489
Q ss_pred ecCCCCcCCCCCCCCCCCCCCCCCeecCceeecCCCCCCCCCCCCCCCCCCCCCCCCceeeCCce-ecCCCCCccccCCC
Q psy12789 307 DCIDGYEGTDCSKSVCPVLCSNHGKYGGGICHCENGWKGPECDIPASDCQYSDCSGHGSCVEGTC-HCQSGWKGIGCQEA 385 (514)
Q Consensus 307 ~C~~Gf~G~~Ce~~~C~~~C~~~G~c~~~~C~C~~G~~G~~Ce~~i~eC~~~~C~~~G~C~~~~C-~C~~Gy~G~~C~~~ 385 (514)
.|.+|+.|..|+. |.+||.+..+... ..|. .+-.. ...| .|.-++.|..|+..
T Consensus 316 ~C~~~ttG~~CE~-------------------C~pgy~~~P~~~g-t~~p-~~~g~-----~~~C~pC~Cn~~g~~CD~~ 369 (426)
T 3zyj_B 316 ECEHNTTGPDCGK-------------------CKKNYQGRPWSPG-SYLP-IPKGA-----ANACIPSISSIGTNVCDNE 369 (426)
T ss_dssp CCCTTEESSSSCE-------------------ECTTCCSSCCCCC-BCCS-SSSCB-----CCCCCCCCC----------
T ss_pred eCCCCCcCCCccc-------------------cccccccCcccCC-cccc-cCCCC-----CCcccCCCCCCCcCccccC
Confidence 9999999999874 5555554433210 0000 00000 1122 12223345566542
Q ss_pred CCCCCCCCCCeeeccCCceeeecCCCcccCCCCc
Q psy12789 386 GCPNACNRHGTCAFENEEYQCVCAEGWAGVDCNI 419 (514)
Q Consensus 386 ~C~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~ 419 (514)
..+|.++|+|.+.. +|.|++||+|..|+.
T Consensus 370 --t~~C~ngg~C~~~~---~C~C~~G~~G~~Ce~ 398 (426)
T 3zyj_B 370 --LLHCQNGGTCHNNV---RCLCPAAYTGILCEK 398 (426)
T ss_dssp ----------------------------------
T ss_pred --cccCCCCCCcCCCC---CCcCCCCCcCCCCcC
Confidence 25788888998654 899999999988764
No 14
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.35 E-value=1.2e-12 Score=142.34 Aligned_cols=90 Identities=21% Similarity=0.417 Sum_probs=29.1
Q ss_pred ecCCCCCccccC-CCCC-CCCCCCCCeeecc----CCceeeecCCCcccCCCCccccCCCCCCCCCCCCCCCCCCCCCCC
Q psy12789 372 HCQSGWKGIGCQ-EAGC-PNACNRHGTCAFE----NEEYQCVCAEGWAGVDCNIKLEMSCNDDTDNDKDGVTDCSDSDCC 445 (514)
Q Consensus 372 ~C~~Gy~G~~C~-~~~C-~~~C~~~G~C~~~----~Gsy~C~C~~Gy~G~~Ce~~~~~~C~d~~~~d~~g~~eC~d~~C~ 445 (514)
.|.+||.|..|+ ...| +..|.++|+|.+. ..++.|.|.+||.|..|+. |.++..+...+.++|...+|.
T Consensus 422 ~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~-----C~~G~~g~~~~~~~C~~C~C~ 496 (525)
T 4aqs_A 422 VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ-----CLPQHWGLSNDLDGCRPCDCD 496 (525)
T ss_dssp EECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC--------------------------
T ss_pred CCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCccc-----CCCCccCCCCCCCCCcCCCCC
Confidence 344444444443 2334 2456666655432 2345899999999999974 555555555566778877887
Q ss_pred CCCeEecC---CCceeecCCCCce
Q psy12789 446 SQPVCSDQ---PHIMCLASNDPVE 466 (514)
Q Consensus 446 ~~~~C~n~---~g~~C~~~~~p~~ 466 (514)
+++.|.+. ....|.+.++...
T Consensus 497 ~~gs~~~~C~~~tG~C~C~~G~~G 520 (525)
T 4aqs_A 497 LGGALNNSCSEDSGQCSCLPHMIG 520 (525)
T ss_dssp ------------------------
T ss_pred CCCccCCccCCCCCeeECCCCCcC
Confidence 76655432 1124777665543
No 15
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.35 E-value=1.3e-13 Score=129.86 Aligned_cols=121 Identities=25% Similarity=0.586 Sum_probs=97.1
Q ss_pred cCceeecCCCCCCC---CCCCCCCCCC----CCCCCCCceeeCC---------ceecCCCCCcc--ccCCCCCC-CCCCC
Q psy12789 333 GGGICHCENGWKGP---ECDIPASDCQ----YSDCSGHGSCVEG---------TCHCQSGWKGI--GCQEAGCP-NACNR 393 (514)
Q Consensus 333 ~~~~C~C~~G~~G~---~Ce~~i~eC~----~~~C~~~G~C~~~---------~C~C~~Gy~G~--~C~~~~C~-~~C~~ 393 (514)
++|.|.|++||.|. .|+ ++++|. ..+|.++++|++. .|.|++||+|. .|++++|. ++|.+
T Consensus 23 g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~ 101 (186)
T 1z1y_A 23 NHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGE 101 (186)
T ss_dssp SCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTCCCCT
T ss_pred CCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCCCCCC
Confidence 57899999999876 885 689998 6789999999753 69999999988 45678894 78999
Q ss_pred CCeee----ccCCceeeecCCCccc-----CCCCccccCCCCCCCCCCCCCCCCCCCCCC-CCCCeEecCCCc-eeecCC
Q psy12789 394 HGTCA----FENEEYQCVCAEGWAG-----VDCNIKLEMSCNDDTDNDKDGVTDCSDSDC-CSQPVCSDQPHI-MCLASN 462 (514)
Q Consensus 394 ~G~C~----~~~Gsy~C~C~~Gy~G-----~~Ce~~~~~~C~d~~~~d~~g~~eC~d~~C-~~~~~C~n~~g~-~C~~~~ 462 (514)
+|+|+ +..++|.|.|++||+| ..|+.. ++++|.. +| ..+++|++..+. .|.+..
T Consensus 102 ~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~--------------~~~~C~~-~C~~~~~~C~n~~g~y~C~C~~ 166 (186)
T 1z1y_A 102 SGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT--------------GETACQL-XCNTDNEVCXNVEGVYXCQCME 166 (186)
T ss_dssp TEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE--------------ECCCCCC-CCCTTTEEEEEETTEEEEEECT
T ss_pred CCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEc--------------CCCcccc-cccccCcceecCCCCeeeECCC
Confidence 99999 7888999999999999 445421 1246764 79 889999998876 698888
Q ss_pred CCceeec
Q psy12789 463 DPVEVLL 469 (514)
Q Consensus 463 ~p~~~~l 469 (514)
++.....
T Consensus 167 G~~g~~~ 173 (186)
T 1z1y_A 167 GFTFDXE 173 (186)
T ss_dssp TCEEETT
T ss_pred CCccCcc
Confidence 7765444
No 16
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.32 E-value=5.2e-12 Score=113.01 Aligned_cols=102 Identities=27% Similarity=0.769 Sum_probs=86.9
Q ss_pred CCCCCCC--CCCCCCCceeeCC----ceecCCCCCccccC--CCCCC-CCCCCCCeeeccCCceeeecCCCcccCCCCcc
Q psy12789 350 IPASDCQ--YSDCSGHGSCVEG----TCHCQSGWKGIGCQ--EAGCP-NACNRHGTCAFENEEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 350 ~~i~eC~--~~~C~~~G~C~~~----~C~C~~Gy~G~~C~--~~~C~-~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
.++++|. ..+|.++|+|++. .|.|++||+|..|+ +++|. ++|.++|+|++..++|.|.|++||+|..|+..
T Consensus 3 ~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~ 82 (135)
T 2vj3_A 3 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN 82 (135)
T ss_dssp CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred cccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceec
Confidence 4688897 5789999999863 89999999999996 57884 78999999999999999999999999999854
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCCCeEecCCCc-eeecCCCCce
Q psy12789 421 LEMSCNDDTDNDKDGVTDCSDSDCCSQPVCSDQPHI-MCLASNDPVE 466 (514)
Q Consensus 421 ~~~~C~d~~~~d~~g~~eC~d~~C~~~~~C~n~~g~-~C~~~~~p~~ 466 (514)
+++|...+|..++.|.+..+. .|.+..++..
T Consensus 83 ---------------~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G 114 (135)
T 2vj3_A 83 ---------------TDECASSPCLHNGRCLDKINEFQCECPTGFTG 114 (135)
T ss_dssp ---------------CCTTTTCCSTTTCEEEECSSCEEEECCTTEES
T ss_pred ---------------CCcccCCCcCCCCEeECCCCCeEEECCCCCcC
Confidence 347888899999999997764 6888776654
No 17
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.28 E-value=7.8e-12 Score=112.28 Aligned_cols=101 Identities=26% Similarity=0.705 Sum_probs=76.3
Q ss_pred CCCCCCCCCCceeeC------CceecCCCCCccccCC--------------CCC-CCCCCCCCeee-------ccCCcee
Q psy12789 354 DCQYSDCSGHGSCVE------GTCHCQSGWKGIGCQE--------------AGC-PNACNRHGTCA-------FENEEYQ 405 (514)
Q Consensus 354 eC~~~~C~~~G~C~~------~~C~C~~Gy~G~~C~~--------------~~C-~~~C~~~G~C~-------~~~Gsy~ 405 (514)
+|...+|.++|+|++ +.|.|++||+|..|+. ++| +++|.++|+|+ +..++|.
T Consensus 2 ~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~ 81 (143)
T 4d90_A 2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYV 81 (143)
T ss_dssp -CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEE
T ss_pred cCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeE
Confidence 455666777777764 2577777777776643 456 46799999999 6668999
Q ss_pred eecCCCcccCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEecCCCc-eeecCCCCceeec
Q psy12789 406 CVCAEGWAGVDCNIKLEMSCNDDTDNDKDGVTDCSDSDCCSQPVCSDQPHI-MCLASNDPVEVLL 469 (514)
Q Consensus 406 C~C~~Gy~G~~Ce~~~~~~C~d~~~~d~~g~~eC~d~~C~~~~~C~n~~g~-~C~~~~~p~~~~l 469 (514)
|.|++||.|..|+.. +++|...+|.+++.|++..+. .|.+..++.....
T Consensus 82 C~C~~G~~G~~C~~~---------------i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c 131 (143)
T 4d90_A 82 CKCPRGFNGIHCQHN---------------INECEVEPCKNGGICTDLVANYSCECPGEFMGRNC 131 (143)
T ss_dssp EECCTTEESTTSCEE---------------CCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTS
T ss_pred eECcCCCcCCCcccC---------------CCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCc
Confidence 999999999999754 348888899999999998765 6988887765444
No 18
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.26 E-value=3.2e-12 Score=115.22 Aligned_cols=108 Identities=22% Similarity=0.585 Sum_probs=81.4
Q ss_pred CCCCCCCCCCcEEeC-CeEecCCCCcCCCCCCCCCCCCCCCCCeecCceeecCCCCCCCCCCCCCCCCCCC---CCCCCc
Q psy12789 289 STCPNGCSGHGSCYL-GKCDCIDGYEGTDCSKSVCPVLCSNHGKYGGGICHCENGWKGPECDIPASDCQYS---DCSGHG 364 (514)
Q Consensus 289 ~~Cp~~C~~~G~C~~-g~C~C~~Gf~G~~Ce~~~C~~~C~~~G~c~~~~C~C~~G~~G~~Ce~~i~eC~~~---~C~~~G 364 (514)
..|++.|.++|.|++ +.|.|++||+|.. +.. ...+..| .++++|... +|.+++
T Consensus 3 ~~C~~~C~~~~~C~~~~~C~C~~G~~g~~-~~~---------------------~~~~~~C-~dideC~~~~~~~C~~~~ 59 (143)
T 2bou_A 3 RGCARWCPQDSSCVNATACRCNPGFSSFS-EII---------------------TTPMETC-DDINECATLSKVSCGKFS 59 (143)
T ss_dssp CCCCTTCCTTEEESSSSCEEECTTEECSS-SSB---------------------CSTTCCC-EECCGGGC----CCCTTE
T ss_pred CCCcCcCCCCCEEcCCCEEeCCCCCcCcc-ccc---------------------cCCCCcC-CccccccCCCCCCCCCCC
Confidence 568899999999984 7899999998863 110 0123455 356777654 788888
Q ss_pred eeeC----CceecCCCCCcc------------ccC-CCCCC---CCCCCCCeeeccCCceeeecCCCcccCCCCc
Q psy12789 365 SCVE----GTCHCQSGWKGI------------GCQ-EAGCP---NACNRHGTCAFENEEYQCVCAEGWAGVDCNI 419 (514)
Q Consensus 365 ~C~~----~~C~C~~Gy~G~------------~C~-~~~C~---~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~ 419 (514)
+|++ +.|.|++||.|. .|+ +++|. ++|.++++|++..|+|.|.|++||+|..+..
T Consensus 60 ~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~ 134 (143)
T 2bou_A 60 DCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIP 134 (143)
T ss_dssp EEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCC
T ss_pred EEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCc
Confidence 8875 278888888876 454 67783 7899999999999999999999999987653
No 19
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.21 E-value=1.9e-11 Score=129.50 Aligned_cols=113 Identities=30% Similarity=0.819 Sum_probs=86.9
Q ss_pred CeEecCCCCcCCCCCCCCCCCCCCCCCeec--CceeecCCCCCCCCCCCCCC----------CCC-CCCCCCCceeeC--
Q psy12789 304 GKCDCIDGYEGTDCSKSVCPVLCSNHGKYG--GGICHCENGWKGPECDIPAS----------DCQ-YSDCSGHGSCVE-- 368 (514)
Q Consensus 304 g~C~C~~Gf~G~~Ce~~~C~~~C~~~G~c~--~~~C~C~~G~~G~~Ce~~i~----------eC~-~~~C~~~G~C~~-- 368 (514)
..|.|.+||.|+.|+. .|. +|.++|.|. .+.|.|++||.|..|+.... .|. ..+|.+++.|..
T Consensus 185 ~~c~C~~g~~G~~C~~-~C~-~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~ 262 (423)
T 2gy5_A 185 IVRRCEAQKWGPECNH-LCT-ACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDP 262 (423)
T ss_dssp EECSSCTTEESTTSCE-ECC-CCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTT
T ss_pred cCCcCCCCCCCCCCCC-CCC-CCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCC
Confidence 3588999999999975 453 688888885 58999999999999974321 233 346777788874
Q ss_pred CceecCCCCCccccCC--------CCCC--CCCCCCCeeeccCCceeeecCCCcccCCCCccc
Q psy12789 369 GTCHCQSGWKGIGCQE--------AGCP--NACNRHGTCAFENEEYQCVCAEGWAGVDCNIKL 421 (514)
Q Consensus 369 ~~C~C~~Gy~G~~C~~--------~~C~--~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~ 421 (514)
+.|.|++||.|..|+. +.|. -+|.++|+|.+.. .|.|++||+|..|+...
T Consensus 263 ~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~~G~~Ce~~~ 322 (423)
T 2gy5_A 263 YGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGWQGLQCEREG 322 (423)
T ss_dssp TEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTCBSTTSCBCS
T ss_pred CeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCC---ceECCCCCcCCCCccCc
Confidence 5899999999999875 2342 2688999998764 49999999999999764
No 20
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.14 E-value=2.1e-11 Score=102.17 Aligned_cols=82 Identities=23% Similarity=0.498 Sum_probs=65.8
Q ss_pred CceeecCCCCCCCCCCCCCCCCCCCCCCCCceeeCCceecCCCCCccccC---CCCC-CCCCCCCCeeeccC--Cceeee
Q psy12789 334 GGICHCENGWKGPECDIPASDCQYSDCSGHGSCVEGTCHCQSGWKGIGCQ---EAGC-PNACNRHGTCAFEN--EEYQCV 407 (514)
Q Consensus 334 ~~~C~C~~G~~G~~Ce~~i~eC~~~~C~~~G~C~~~~C~C~~Gy~G~~C~---~~~C-~~~C~~~G~C~~~~--Gsy~C~ 407 (514)
+|.|.|.+||.|..|+ +++|...||.+... .+.|.|++||+ .|+ +++| +++|.++|+|++.. ++|.|.
T Consensus 1 sy~C~C~~g~~g~~c~--~~~c~~~pC~n~~~--~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~ 74 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQ--QHQSWLRPVLRSNR--VEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQ 74 (91)
T ss_dssp CCCCCCBCSSSCCBCC--SSCEEEEECSSSSC--EEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEEE
T ss_pred CeeeECCCCCcCCeEC--CCcccCCccccCCC--CcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEeE
Confidence 4788899999998885 66776667754321 23899999998 786 5678 47899999999887 899999
Q ss_pred cCCCcccCCCCccc
Q psy12789 408 CAEGWAGVDCNIKL 421 (514)
Q Consensus 408 C~~Gy~G~~Ce~~~ 421 (514)
|++||+|..|++.+
T Consensus 75 C~~G~~G~~Ce~~i 88 (91)
T 1tpg_A 75 CPEGFAGKSCEIDT 88 (91)
T ss_dssp CCTTCBSSSCCBCS
T ss_pred CCCCCcCCcCCcCC
Confidence 99999999998754
No 21
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=99.13 E-value=2.5e-11 Score=117.56 Aligned_cols=75 Identities=27% Similarity=0.667 Sum_probs=49.0
Q ss_pred CCCCCCCeecCceeecCCCCCCCCCCCCCCCCCCCCCCCCceeeCCceecCCCCCccccCCCCCCCCCCCCCeeeccCCc
Q psy12789 324 VLCSNHGKYGGGICHCENGWKGPECDIPASDCQYSDCSGHGSCVEGTCHCQSGWKGIGCQEAGCPNACNRHGTCAFENEE 403 (514)
Q Consensus 324 ~~C~~~G~c~~~~C~C~~G~~G~~Ce~~i~eC~~~~C~~~G~C~~~~C~C~~Gy~G~~C~~~~C~~~C~~~G~C~~~~Gs 403 (514)
..|+++|.|..+.|.|.+||.|..|+.+..... .++ . +..|.......+|+++|+|+. +
T Consensus 96 ~~Csg~G~C~~g~C~C~~G~~G~~Cec~~~~~~-~~~------~-----------~~~C~~~~~~~~Csg~G~C~~--g- 154 (217)
T 2p28_B 96 SLCHGKGFLECGICRCDTGYIGKNCECQTQGRS-SQE------L-----------EGSCRKDNNSIICSGLGDCVC--G- 154 (217)
T ss_dssp CTTTTSEEEETTEEEECTTEESTTSCEECCCCC--GG------G-----------GGGGBSSTTSCBGGGTEEEET--T-
T ss_pred CccCCCceEECCEEECCCCccCCcccccCcccc-ccc------C-----------CCcCCCCCCCCCCCCCCEEeC--C-
Confidence 467788888778888888888888863322110 010 0 112222222467999999984 2
Q ss_pred eeeecCCC------cccCCCCcc
Q psy12789 404 YQCVCAEG------WAGVDCNIK 420 (514)
Q Consensus 404 y~C~C~~G------y~G~~Ce~~ 420 (514)
.|.|.+| |+|..|+..
T Consensus 155 -~C~C~~gw~~~~~~~G~~Ce~~ 176 (217)
T 2p28_B 155 -QCLCHTSDVPGKLIYGQYCECD 176 (217)
T ss_dssp -EEEECCCCSTTCCEESTTSCEE
T ss_pred -ceECCCCCCCcccEECCCcccC
Confidence 8999999 699999854
No 22
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.10 E-value=1.1e-10 Score=128.73 Aligned_cols=84 Identities=29% Similarity=0.820 Sum_probs=67.7
Q ss_pred cee-ecCCCCCC--CCCCCCCCCCCCCC--CCCCc---eeeCC----cee-cCCCCCccccC----------------CC
Q psy12789 335 GIC-HCENGWKG--PECDIPASDCQYSD--CSGHG---SCVEG----TCH-CQSGWKGIGCQ----------------EA 385 (514)
Q Consensus 335 ~~C-~C~~G~~G--~~Ce~~i~eC~~~~--C~~~G---~C~~~----~C~-C~~Gy~G~~C~----------------~~ 385 (514)
|.| .|++||.| ..|+ ++++|...+ |.+++ +|++. +|. |++||+|..|+ ++
T Consensus 25 y~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~did 103 (634)
T 1yo8_A 25 WSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPEN 103 (634)
T ss_dssp EEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECC
T ss_pred eECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccc
Confidence 677 77777776 6774 678887766 88888 88763 798 99999887653 57
Q ss_pred CCC---CCCCCCCeeeccC----CceeeecCCCccc--CCCCc
Q psy12789 386 GCP---NACNRHGTCAFEN----EEYQCVCAEGWAG--VDCNI 419 (514)
Q Consensus 386 ~C~---~~C~~~G~C~~~~----Gsy~C~C~~Gy~G--~~Ce~ 419 (514)
+|. ++|.++++|++.. ++|+|.|++||+| ..|+.
T Consensus 104 eC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~ 146 (634)
T 1yo8_A 104 PCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGE 146 (634)
T ss_dssp TTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEE
T ss_pred cccCCCcccccCccccccccccccceeeeccCCccccCccccc
Confidence 884 5899999999998 9999999999998 67764
No 23
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.08 E-value=3.5e-13 Score=133.77 Aligned_cols=117 Identities=13% Similarity=0.049 Sum_probs=83.7
Q ss_pred CCCCcEEeC----CeEecCCCCcCCCCCCCC--C-------CCCCCCCCeecCceeecCCCCCCCCCCCCCCCCCCCCCC
Q psy12789 295 CSGHGSCYL----GKCDCIDGYEGTDCSKSV--C-------PVLCSNHGKYGGGICHCENGWKGPECDIPASDCQYSDCS 361 (514)
Q Consensus 295 C~~~G~C~~----g~C~C~~Gf~G~~Ce~~~--C-------~~~C~~~G~c~~~~C~C~~G~~G~~Ce~~i~eC~~~~C~ 361 (514)
|.++|+|++ |.|.|++||+|..|+... | ..+|.+.+ .| +.|..|+. .++|.+.||.
T Consensus 40 c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~ngg-----tc-----~~G~~c~~-~~eC~s~pC~ 108 (267)
T 4fbr_A 40 SDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGG-----VW-----VLGARDKQ-NIVAVSIKSN 108 (267)
T ss_dssp CSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEE-----EE-----ECCCCSSC-CEEEEEEECS
T ss_pred cCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCC-----ee-----eccCcccc-ccccCCCCCC
Confidence 668899984 789999999999997532 2 12233222 22 35667754 3467777777
Q ss_pred CCceeeC----CceecCCCCCccccCCC--------------------------------CCCCCCCCCCeeeccCCcee
Q psy12789 362 GHGSCVE----GTCHCQSGWKGIGCQEA--------------------------------GCPNACNRHGTCAFENEEYQ 405 (514)
Q Consensus 362 ~~G~C~~----~~C~C~~Gy~G~~C~~~--------------------------------~C~~~C~~~G~C~~~~Gsy~ 405 (514)
++|+|++ ++|.|++||+|..|+.+ .++.+|.++|+|++..++|+
T Consensus 109 ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~ 188 (267)
T 4fbr_A 109 DGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYN 188 (267)
T ss_dssp STTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEET
T ss_pred CCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeE
Confidence 7777775 37777778777766421 11346889999999999999
Q ss_pred eecCCCcccCCCCcccc
Q psy12789 406 CVCAEGWAGVDCNIKLE 422 (514)
Q Consensus 406 C~C~~Gy~G~~Ce~~~~ 422 (514)
|.|++||+|..|+..++
T Consensus 189 C~Cp~Gf~G~~c~~~i~ 205 (267)
T 4fbr_A 189 GEGPIGFRGTLTSPDTY 205 (267)
T ss_dssp TSCCEEEEEEEEETTEE
T ss_pred EeCCCCccccccccccc
Confidence 99999999999986554
No 24
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.04 E-value=3.9e-10 Score=119.46 Aligned_cols=122 Identities=27% Similarity=0.661 Sum_probs=88.1
Q ss_pred CCCCCcEEeC--CeEecCCCCcCCCCCCC--------CCC------CCCCCCCee--cCceeecCCCCCCCCCCCCC---
Q psy12789 294 GCSGHGSCYL--GKCDCIDGYEGTDCSKS--------VCP------VLCSNHGKY--GGGICHCENGWKGPECDIPA--- 352 (514)
Q Consensus 294 ~C~~~G~C~~--g~C~C~~Gf~G~~Ce~~--------~C~------~~C~~~G~c--~~~~C~C~~G~~G~~Ce~~i--- 352 (514)
+|.++|.|.. +.|.|++||+|..|+.. .|. ..|.+++.| +.+.|.|++||.|..|+...
T Consensus 204 ~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G 283 (423)
T 2gy5_A 204 ACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPG 283 (423)
T ss_dssp CCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEEECCBTCBSGGGCBCCCTT
T ss_pred CCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEEeCCCcccccccCccCCC
Confidence 6999999984 89999999999999842 232 345555666 47899999999999997411
Q ss_pred ---CCCC-CCCCCCCceeeCC-ceecCCCCCccccCCCCCCCCCCCCCeeeccCCceeeecCCCcccCCCCcc
Q psy12789 353 ---SDCQ-YSDCSGHGSCVEG-TCHCQSGWKGIGCQEAGCPNACNRHGTCAFENEEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 353 ---~eC~-~~~C~~~G~C~~~-~C~C~~Gy~G~~C~~~~C~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
..|. ..+|.++|+|.+. .|.|++||+|..|+...++... ..+.... -.|.|.+||.|..|+..
T Consensus 284 ~~G~~C~~~C~C~ngg~C~~~~~C~C~~G~~G~~Ce~~~~~~~~---~~~~~~~--~~~~c~~g~~g~~C~~~ 351 (423)
T 2gy5_A 284 FYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCEREGIPRMT---PKIVDLP--DHIEVNSGKFNPICKAS 351 (423)
T ss_dssp BCSBTTCCBCCCTTCCEEETTTEEECCTTCBSTTSCBCSSCCCC---CEECSCC--SBCCEESEEECCEEEEE
T ss_pred CcCCcccccccCCCCCEecCCCceECCCCCcCCCCccCccCCcC---cceecCC--CeEEeCCCccCCccccc
Confidence 1232 2278899999873 6999999999999975443211 1111112 25899999999888643
No 25
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.95 E-value=4.4e-10 Score=101.14 Aligned_cols=107 Identities=24% Similarity=0.603 Sum_probs=81.7
Q ss_pred CCCCCCceeeC-CceecCCCCCc---------cccC-CCCCCC----CCCCCCeeeccCCceeeecCCCcccCCCCcccc
Q psy12789 358 SDCSGHGSCVE-GTCHCQSGWKG---------IGCQ-EAGCPN----ACNRHGTCAFENEEYQCVCAEGWAGVDCNIKLE 422 (514)
Q Consensus 358 ~~C~~~G~C~~-~~C~C~~Gy~G---------~~C~-~~~C~~----~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~~ 422 (514)
.+|.++++|++ +.|.|++||+| ..|+ +++|.. +|.++++|++..++|.|.|++||+|..++....
T Consensus 7 ~~C~~~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~ 86 (143)
T 2bou_A 7 RWCPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFK 86 (143)
T ss_dssp TTCCTTEEESSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBS
T ss_pred CcCCCCCEEcCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccc
Confidence 57888899987 48999999987 4674 788842 799999999999999999999999987764321
Q ss_pred CCCCCCCCCCCCCCCCCCC--CCCCCCCeEecCCCc-eeecCCCCceee
Q psy12789 423 MSCNDDTDNDKDGVTDCSD--SDCCSQPVCSDQPHI-MCLASNDPVEVL 468 (514)
Q Consensus 423 ~~C~d~~~~d~~g~~eC~d--~~C~~~~~C~n~~g~-~C~~~~~p~~~~ 468 (514)
......+.++++|.. .+|..++.|+++.+. .|.+..++....
T Consensus 87 ----~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~ 131 (143)
T 2bou_A 87 ----NESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRH 131 (143)
T ss_dssp ----SGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCT
T ss_pred ----cCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCC
Confidence 111122345778875 689999999998876 688887766543
No 26
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.88 E-value=8.4e-12 Score=123.89 Aligned_cols=155 Identities=10% Similarity=-0.027 Sum_probs=110.8
Q ss_pred EecCCC---CcCCCCCCCC--CCCCCCCCCee----cCceeecCCCCCCCCCCCCCCC------CCCCCCCCCceeeCCc
Q psy12789 306 CDCIDG---YEGTDCSKSV--CPVLCSNHGKY----GGGICHCENGWKGPECDIPASD------CQYSDCSGHGSCVEGT 370 (514)
Q Consensus 306 C~C~~G---f~G~~Ce~~~--C~~~C~~~G~c----~~~~C~C~~G~~G~~Ce~~i~e------C~~~~C~~~G~C~~~~ 370 (514)
|.|.+| +.|..|+... +...|.++|+| ++|.|.|+.||+|..|+.++++ |.+.||.++++|+
T Consensus 15 ~~~~pgg~~~~g~~~~~n~~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~--- 91 (267)
T 4fbr_A 15 ATWNPGGLWLIGARDKQNVVALDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWV--- 91 (267)
T ss_dssp SCCEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEE---
T ss_pred CCcCCCCceeeccccccccccCCCCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeee---
Confidence 334445 5677776543 34468888887 6789999999999999998888 6666777777664
Q ss_pred eecCCCCCccccCC-CCC-CCCCCCCCeeeccCCceeeecCCCcccCCCCccccC----------CCCCC---C-CCCCC
Q psy12789 371 CHCQSGWKGIGCQE-AGC-PNACNRHGTCAFENEEYQCVCAEGWAGVDCNIKLEM----------SCNDD---T-DNDKD 434 (514)
Q Consensus 371 C~C~~Gy~G~~C~~-~~C-~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~~~----------~C~d~---~-~~d~~ 434 (514)
.|..|+. ++| +.+|.++|+|++..++|+|.|++||+|..|+..++. .|... . -..++
T Consensus 92 -------~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~ 164 (267)
T 4fbr_A 92 -------LGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGK 164 (267)
T ss_dssp -------CCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTT
T ss_pred -------ccCccccccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccc
Confidence 4566653 467 478999999999999999999999999999987642 12211 0 11223
Q ss_pred CCCCCCCCCCCCCCeEecCCCc-eeecCCCCceeecc
Q psy12789 435 GVTDCSDSDCCSQPVCSDQPHI-MCLASNDPVEVLLR 470 (514)
Q Consensus 435 g~~eC~d~~C~~~~~C~n~~g~-~C~~~~~p~~~~l~ 470 (514)
...+|.+.+|.++++|.+.... .|.+++.+...++.
T Consensus 165 ~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~ 201 (267)
T 4fbr_A 165 QNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTS 201 (267)
T ss_dssp SCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEE
T ss_pred cccccCCCCCCCCCEeeCCCCCeEEeCCCCccccccc
Confidence 3345677789999999984433 58888776655543
No 27
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.83 E-value=1.7e-09 Score=90.50 Aligned_cols=78 Identities=21% Similarity=0.482 Sum_probs=64.4
Q ss_pred CCeEecCCCCcCCCCCCCCCC-CCCCCCCeecCceeecCCCCCCCCCC-CCCCCCCCCCCCCCceeeC------CceecC
Q psy12789 303 LGKCDCIDGYEGTDCSKSVCP-VLCSNHGKYGGGICHCENGWKGPECD-IPASDCQYSDCSGHGSCVE------GTCHCQ 374 (514)
Q Consensus 303 ~g~C~C~~Gf~G~~Ce~~~C~-~~C~~~G~c~~~~C~C~~G~~G~~Ce-~~i~eC~~~~C~~~G~C~~------~~C~C~ 374 (514)
++.|.|.+||+|..|+...|. .+|.+. -+.+.|.|++||. .|+ .++++|...||.++|+|++ +.|.|+
T Consensus 1 sy~C~C~~g~~g~~c~~~~c~~~pC~n~--~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~ 76 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQHQSWLRPVLRS--NRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCP 76 (91)
T ss_dssp CCCCCCBCSSSCCBCCSSCEEEEECSSS--SCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECC
T ss_pred CeeeECCCCCcCCeECCCcccCCccccC--CCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECC
Confidence 368999999999999877663 345443 2568999999998 897 5788999999999999973 279999
Q ss_pred CCCCccccCC
Q psy12789 375 SGWKGIGCQE 384 (514)
Q Consensus 375 ~Gy~G~~C~~ 384 (514)
+||+|..|++
T Consensus 77 ~G~~G~~Ce~ 86 (91)
T 1tpg_A 77 EGFAGKSCEI 86 (91)
T ss_dssp TTCBSSSCCB
T ss_pred CCCcCCcCCc
Confidence 9999999974
No 28
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=98.81 E-value=1.3e-10 Score=120.99 Aligned_cols=29 Identities=21% Similarity=0.447 Sum_probs=23.6
Q ss_pred Ccceecceecccccee-eEEeeecCCCCce
Q psy12789 111 SFQFWNSDFNIEQSAF-FRFNFDLPRGSNF 139 (514)
Q Consensus 111 p~~fW~~~~~~~~p~~-~~fn~tl~~~a~~ 139 (514)
+.+||+|+.+..-.++ ..+||||.+++.|
T Consensus 83 ~~TwWQS~~~~~~~~~~~~VtitLdL~~~f 112 (375)
T 4aqt_A 83 DTTWWQSQTMLAGVQYPNSINLTLHLGKAF 112 (375)
T ss_dssp SCCCEECCCGGGTCSSSCCEEEEEEEEEEE
T ss_pred CCceEECCCccccCCCCcceEEEEcCCCeE
Confidence 5699999988764444 5789999999988
No 29
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.77 E-value=7.5e-09 Score=114.26 Aligned_cols=115 Identities=17% Similarity=0.413 Sum_probs=85.2
Q ss_pred CCCCCCCCCCCCCceeeC-----Cce-ecCCCCCc--cccC-CCCCC-CC--CCCCC---eeeccCCceeee-cCCCccc
Q psy12789 351 PASDCQYSDCSGHGSCVE-----GTC-HCQSGWKG--IGCQ-EAGCP-NA--CNRHG---TCAFENEEYQCV-CAEGWAG 414 (514)
Q Consensus 351 ~i~eC~~~~C~~~G~C~~-----~~C-~C~~Gy~G--~~C~-~~~C~-~~--C~~~G---~C~~~~Gsy~C~-C~~Gy~G 414 (514)
++++|...||.++++|++ ++| .|++||+| ..|+ +++|. ++ |.+++ +|++..++|+|. |++||+|
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G 81 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRG 81 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEE
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCccc
Confidence 467898889999999985 379 99999998 6897 78994 44 99998 999999999999 9999999
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCC--CCCCCCCeEecCC----C-ceeecCCCCce
Q psy12789 415 VDCNIKLEMSCNDDTDNDKDGVTDCSD--SDCCSQPVCSDQP----H-IMCLASNDPVE 466 (514)
Q Consensus 415 ~~Ce~~~~~~C~d~~~~d~~g~~eC~d--~~C~~~~~C~n~~----g-~~C~~~~~p~~ 466 (514)
..|+..-...+. .....|..+++|.. .+|..+++|++.. + ..|.|..++..
T Consensus 82 ~~c~g~g~~~~~-~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G 139 (634)
T 1yo8_A 82 NQPVGVGLEAAK-TEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG 139 (634)
T ss_dssp CCCEESSSHHHH-SCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE
T ss_pred Cccccccccccc-cCCCcccccccccCCCcccccCccccccccccccceeeeccCCccc
Confidence 988621000000 00112345778986 4899999999987 4 46888877654
No 30
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=98.72 E-value=2.5e-09 Score=112.08 Aligned_cols=28 Identities=21% Similarity=0.304 Sum_probs=25.1
Q ss_pred cceecceeccccceeeEEeeecCCCCce
Q psy12789 112 FQFWNSDFNIEQSAFFRFNFDLPRGSNF 139 (514)
Q Consensus 112 ~~fW~~~~~~~~p~~~~fn~tl~~~a~~ 139 (514)
.+||+|+.+..-++|..+||||.+++.|
T Consensus 91 ~twWQS~~~~~g~~~~~V~itLdL~~~f 118 (403)
T 2y38_A 91 ERWWQSPPLSRGLEYNEVNVTLDLGQVF 118 (403)
T ss_dssp SCCEECCCSTTCSSTTCCEEEEEEEEEE
T ss_pred ceeeccCCccCCCccccceeEEeCCCcE
Confidence 4799999988878889999999999888
No 31
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.68 E-value=2.3e-09 Score=114.82 Aligned_cols=78 Identities=31% Similarity=0.809 Sum_probs=38.9
Q ss_pred eeecCCCCCCCCCCCCCCCCCCCCCCCCceeeC-CceecCCCCCccccCCCCCCCCCCCCCeeeccCCceeeecCCCccc
Q psy12789 336 ICHCENGWKGPECDIPASDCQYSDCSGHGSCVE-GTCHCQSGWKGIGCQEAGCPNACNRHGTCAFENEEYQCVCAEGWAG 414 (514)
Q Consensus 336 ~C~C~~G~~G~~Ce~~i~eC~~~~C~~~G~C~~-~~C~C~~Gy~G~~C~~~~C~~~C~~~G~C~~~~Gsy~C~C~~Gy~G 414 (514)
.+.|..+|.|..|+ .++|.. +|.+ |+|+. +.|.|.+||+|..|+++.|..+|.++|+|++. +.|.|.+||+|
T Consensus 378 p~~C~~~~~g~~c~--~~~C~~-~C~n-G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~---~~C~C~~G~~G 450 (463)
T 2wg3_C 378 PEECRATVQPAQTL--TSECSR-LCRN-GYCTPTGKCCCSPGWEGDFCRTAKCEPACRHGGVCVRP---NKCLCKKGYLG 450 (463)
T ss_dssp CGGGCCCCCCCCCC--CCHHHH-HCCS-EEECTTSCEEECTTEESTTSCEECC---------------------------
T ss_pred cccCCCCCcCCCCc--cccccC-CCCC-CccCCCCeECCCCCcCCCcCCcCcCCCCCCCCCEECCC---CEEECCCCccc
Confidence 35677888888886 456754 5875 89986 68999999999999988998799999999865 58999999999
Q ss_pred CCCCcc
Q psy12789 415 VDCNIK 420 (514)
Q Consensus 415 ~~Ce~~ 420 (514)
..|+..
T Consensus 451 ~~C~~~ 456 (463)
T 2wg3_C 451 PQCEQV 456 (463)
T ss_dssp ------
T ss_pred CCCCCC
Confidence 999864
No 32
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.66 E-value=2.3e-09 Score=96.95 Aligned_cols=112 Identities=20% Similarity=0.472 Sum_probs=75.3
Q ss_pred CCCCCCcEEeC----CeEecCCCCcCCCCCCCCCCCCCCCCCeecCceeecCCCCCCCCCCCCCCCCCC-------CCCC
Q psy12789 293 NGCSGHGSCYL----GKCDCIDGYEGTDCSKSVCPVLCSNHGKYGGGICHCENGWKGPECDIPASDCQY-------SDCS 361 (514)
Q Consensus 293 ~~C~~~G~C~~----g~C~C~~Gf~G~~Ce~~~C~~~C~~~G~c~~~~C~C~~G~~G~~Ce~~i~eC~~-------~~C~ 361 (514)
++|. +|.|++ +.|.|++||+|..+.. .|.. ...+.|..+|.|..|+.++++|.. ....
T Consensus 10 ~pC~-ng~C~n~~g~y~C~C~~G~~g~~~~~-~C~~---------~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~ 78 (147)
T 2w86_A 10 SPCI-NGVCKNSPGSFICECSSESTLDPTKT-ICIE---------TIKGTCWQTVIDGRCEININGATLKSQCCSSLGAA 78 (147)
T ss_dssp CCSB-TSEEEEETTEEEEECCTTEEECTTSS-BEEE---------CCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSE
T ss_pred CCCC-CCEeECCCCCEEeECCCCcccCCCCC-eecC---------CCCCcccCCCCCCccccCCCccccCCccccCcCcc
Confidence 4575 579983 6899999999987642 2211 112346667777777655554421 1111
Q ss_pred CCceee--CCceecCCCCC---ccccC-CCCC---CCCCCCCCeeeccCCceeeecCCCcccCC
Q psy12789 362 GHGSCV--EGTCHCQSGWK---GIGCQ-EAGC---PNACNRHGTCAFENEEYQCVCAEGWAGVD 416 (514)
Q Consensus 362 ~~G~C~--~~~C~C~~Gy~---G~~C~-~~~C---~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~ 416 (514)
.++.|. .+.|.|++||+ |..|+ +++| +++|.+ |+|++..|+|+|.|++||+|..
T Consensus 79 ~g~~C~~c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 79 WGSPCTLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp ETTTTEECCCCTTTCTTEEEEETTEEEECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBCT
T ss_pred cCCCcccCCCcccCCCccccCCCCccCccccccCCCCCCCC-CEEECCCCCEEeeCCCCCccCC
Confidence 112222 14789999995 88896 7888 356984 6999999999999999999854
No 33
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.62 E-value=1.5e-08 Score=91.95 Aligned_cols=76 Identities=25% Similarity=0.784 Sum_probs=57.8
Q ss_pred CCCCCCCCCCCCCCCCCceeeC----CceecCCCCCccccC-CCCCC---CCCCCCCee-eccCCceeeecCCCcc----
Q psy12789 347 ECDIPASDCQYSDCSGHGSCVE----GTCHCQSGWKGIGCQ-EAGCP---NACNRHGTC-AFENEEYQCVCAEGWA---- 413 (514)
Q Consensus 347 ~Ce~~i~eC~~~~C~~~G~C~~----~~C~C~~Gy~G~~C~-~~~C~---~~C~~~G~C-~~~~Gsy~C~C~~Gy~---- 413 (514)
.| .++++|...||.++|+|++ +.|.|++||+|..|+ +++|. ..|.+ +| ++..|+|.|.|++||+
T Consensus 44 ~c-~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~d 120 (146)
T 1x7a_L 44 QY-VDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPD 120 (146)
T ss_dssp -------CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTT
T ss_pred cC-CCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCCccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCC
Confidence 45 4788999999999999986 389999999999997 46884 35754 89 9999999999999999
Q ss_pred cCCCCccccCCC
Q psy12789 414 GVDCNIKLEMSC 425 (514)
Q Consensus 414 G~~Ce~~~~~~C 425 (514)
|..|+...+..|
T Consensus 121 G~~C~~~~~~pC 132 (146)
T 1x7a_L 121 QKSCKPAVPFPC 132 (146)
T ss_dssp SSSEEECSSSCT
T ss_pred CCcCCCCCCCCC
Confidence 777765444333
No 34
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.62 E-value=7.6e-09 Score=95.01 Aligned_cols=112 Identities=24% Similarity=0.591 Sum_probs=76.0
Q ss_pred CCCCCCcEEeC----CeEecCCCCc----CCCCCC-CC--CCC---CC--CCCCee----c----CceeecCCCCC-CCC
Q psy12789 293 NGCSGHGSCYL----GKCDCIDGYE----GTDCSK-SV--CPV---LC--SNHGKY----G----GGICHCENGWK-GPE 347 (514)
Q Consensus 293 ~~C~~~G~C~~----g~C~C~~Gf~----G~~Ce~-~~--C~~---~C--~~~G~c----~----~~~C~C~~G~~-G~~ 347 (514)
++|. +|.|++ +.|.|++||+ |..|+. .. |.. .| ..++.| + ++.|.|++||. |..
T Consensus 10 ~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~ 88 (162)
T 1uzk_A 10 TTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTP 88 (162)
T ss_dssp TSSB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTT
T ss_pred CCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCC
Confidence 5675 689984 7999999998 778863 22 521 12 123333 2 68999999997 766
Q ss_pred CCCCCCCCCCCCCCCCceeeCCceecCC--CCCcc----cc-CCCCCC---CCCCCCCeeeccCCceeeecCCCcccCC
Q psy12789 348 CDIPASDCQYSDCSGHGSCVEGTCHCQS--GWKGI----GC-QEAGCP---NACNRHGTCAFENEEYQCVCAEGWAGVD 416 (514)
Q Consensus 348 Ce~~i~eC~~~~C~~~G~C~~~~C~C~~--Gy~G~----~C-~~~~C~---~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~ 416 (514)
|+. |. .... ..+.|.|++ ||+|. .| ++++|. ++|.+ |+|++..|+|+|.|++||+|..
T Consensus 89 C~~----C~-----~~~~-~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 89 CEM----CP-----AVNT-SEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp TEE----CC-----CTTS-HHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred ccc----CC-----CCCC-CCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence 641 21 1100 124788987 99875 34 378883 56974 7999999999999999999864
No 35
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.62 E-value=5.4e-09 Score=91.42 Aligned_cols=95 Identities=27% Similarity=0.720 Sum_probs=71.0
Q ss_pred CCCCCCCCCCCCCceeeCC-----ceecCCCCCccccCCCCCCCCCCCC---CeeeccCCceeeecCCCcc---cCCCCc
Q psy12789 351 PASDCQYSDCSGHGSCVEG-----TCHCQSGWKGIGCQEAGCPNACNRH---GTCAFENEEYQCVCAEGWA---GVDCNI 419 (514)
Q Consensus 351 ~i~eC~~~~C~~~G~C~~~-----~C~C~~Gy~G~~C~~~~C~~~C~~~---G~C~~~~Gsy~C~C~~Gy~---G~~Ce~ 419 (514)
++++|...+|.+ +|++. .|.|++||.|..+++++|...|.++ +.|++ .++|.|.|++||+ |..|+
T Consensus 3 dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~~~C~~-~~~y~C~C~~Gy~~~~g~~C~- 78 (118)
T 1dx5_I 3 PVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACPADCDP-NTQASCECPEGYILDDGFICT- 78 (118)
T ss_dssp CCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEECEECT-TSTTCEECCTTEEEETTTEEE-
T ss_pred ccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCCCcccC-CCCeEeECCCCccCCCCCccc-
Confidence 578888888973 88753 7999999999877665664445443 78888 5889999999999 65552
Q ss_pred cccCCCCCCCCCCCCCCCCCCC-CCCCCCCeEecCCCc-eeecCCCCce
Q psy12789 420 KLEMSCNDDTDNDKDGVTDCSD-SDCCSQPVCSDQPHI-MCLASNDPVE 466 (514)
Q Consensus 420 ~~~~~C~d~~~~d~~g~~eC~d-~~C~~~~~C~n~~g~-~C~~~~~p~~ 466 (514)
++++|.. .+| +++|+++.+. .|.+..++..
T Consensus 79 ---------------dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g 110 (118)
T 1dx5_I 79 ---------------DIDECENGGFC--SGVCHNLPGTFECICGPDSAL 110 (118)
T ss_dssp ---------------ECCHHHHCSSC--SSEEEECSSSEEEEECSSSSC
T ss_pred ---------------cccccCCCCCC--cCeEEeCCCCEEEECCCCCcc
Confidence 2457776 678 7899998875 6888776543
No 36
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.61 E-value=4.1e-08 Score=85.19 Aligned_cols=65 Identities=37% Similarity=0.926 Sum_probs=49.3
Q ss_pred CCCCCCCCC--------CCCCceeeCC----ceecCCCCCccccCC----CCCC---CCCCCCCeeeccCCceeeecCCC
Q psy12789 351 PASDCQYSD--------CSGHGSCVEG----TCHCQSGWKGIGCQE----AGCP---NACNRHGTCAFENEEYQCVCAEG 411 (514)
Q Consensus 351 ~i~eC~~~~--------C~~~G~C~~~----~C~C~~Gy~G~~C~~----~~C~---~~C~~~G~C~~~~Gsy~C~C~~G 411 (514)
++++|...| |.++|+|++. .|.|++||+|..|+. ++|. ..|.. +|++..|+|.|.|++|
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G 82 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPG 82 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCTT
T ss_pred ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCCC
Confidence 456666666 8899999863 899999999999973 2563 23432 9999999999999999
Q ss_pred cccCCC
Q psy12789 412 WAGVDC 417 (514)
Q Consensus 412 y~G~~C 417 (514)
|+|...
T Consensus 83 ~~~~~~ 88 (114)
T 1aut_L 83 YKLGDD 88 (114)
T ss_dssp EEECTT
T ss_pred eeECCC
Confidence 996443
No 37
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.60 E-value=5.4e-09 Score=91.39 Aligned_cols=50 Identities=26% Similarity=0.745 Sum_probs=41.3
Q ss_pred ceeeC---CceecCCCCC---ccccC-CCCCC--CCCCCCCeeeccCCceeeecCCCcccC
Q psy12789 364 GSCVE---GTCHCQSGWK---GIGCQ-EAGCP--NACNRHGTCAFENEEYQCVCAEGWAGV 415 (514)
Q Consensus 364 G~C~~---~~C~C~~Gy~---G~~C~-~~~C~--~~C~~~G~C~~~~Gsy~C~C~~Gy~G~ 415 (514)
+.|++ +.|.|++||+ |..|. +++|. ++| +++|++..|+|.|.|++||+|.
T Consensus 53 ~~C~~~~~y~C~C~~Gy~~~~g~~C~dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 53 ADCDPNTQASCECPEGYILDDGFICTDIDECENGGFC--SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp CEECTTSTTCEECCTTEEEETTTEEEECCHHHHCSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred CcccCCCCeEeECCCCccCCCCCccccccccCCCCCC--cCeEEeCCCCEEEECCCCCccC
Confidence 45554 4899999998 77885 67782 788 6899999999999999999874
No 38
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.59 E-value=1.9e-08 Score=90.72 Aligned_cols=76 Identities=28% Similarity=0.698 Sum_probs=60.7
Q ss_pred CCCCCCCCCCCCCCceeeC----CceecCCCCCccccCC--CCCC-CCCCCCC---eeeccCC-ceeeecCCCcc----c
Q psy12789 350 IPASDCQYSDCSGHGSCVE----GTCHCQSGWKGIGCQE--AGCP-NACNRHG---TCAFENE-EYQCVCAEGWA----G 414 (514)
Q Consensus 350 ~~i~eC~~~~C~~~G~C~~----~~C~C~~Gy~G~~C~~--~~C~-~~C~~~G---~C~~~~G-sy~C~C~~Gy~----G 414 (514)
.++++|...+|.++|+|++ +.|.|++||+|..|+. ++|. ..|.+++ +|++..| +|.|.|++||+ |
T Consensus 45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG 124 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG 124 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTS
T ss_pred CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCC
Confidence 3678898899999999986 3899999999999984 5552 3455555 9999999 99999999999 8
Q ss_pred CCCCccccCCC
Q psy12789 415 VDCNIKLEMSC 425 (514)
Q Consensus 415 ~~Ce~~~~~~C 425 (514)
..|+...+..|
T Consensus 125 ~~C~~~~e~pC 135 (142)
T 2c4f_L 125 VSCTPTVEYPC 135 (142)
T ss_dssp SCEEESSSSCT
T ss_pred CCCCCCCccCC
Confidence 88876544434
No 39
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.56 E-value=6e-08 Score=79.28 Aligned_cols=65 Identities=31% Similarity=0.842 Sum_probs=54.3
Q ss_pred CCCCCCCC-CCCCCCceeeC----CceecCCCCC--ccccC-CCCC--CCCCCCCCeeeccCCceeeecCCCcccCC
Q psy12789 350 IPASDCQY-SDCSGHGSCVE----GTCHCQSGWK--GIGCQ-EAGC--PNACNRHGTCAFENEEYQCVCAEGWAGVD 416 (514)
Q Consensus 350 ~~i~eC~~-~~C~~~G~C~~----~~C~C~~Gy~--G~~C~-~~~C--~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~ 416 (514)
.++++|.. .+|. +|+|++ +.|.|++||. |..|+ +++| .++|.+ |+|++..|+|.|.|++||+|..
T Consensus 3 ~dideC~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 3 VDMDECKEPDVCK-HGQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp CCCCSSSSTTSCS-SSEECCCSSCCCEECCTTEEEETTEEEECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred CccccCCCCCCcC-CCEEEecCCCEEEECCCCeECCCCccCCcccccCCCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence 46888975 7896 489986 3899999997 88886 6888 478975 6999999999999999998853
No 40
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.54 E-value=1.7e-08 Score=96.11 Aligned_cols=72 Identities=29% Similarity=0.759 Sum_probs=28.6
Q ss_pred CCCCCCCCCCCCCCCCCceeeC----CceecCCCCCccccCC---CCCC---CCCCCCCeeeccCCceeeecCCCcc---
Q psy12789 347 ECDIPASDCQYSDCSGHGSCVE----GTCHCQSGWKGIGCQE---AGCP---NACNRHGTCAFENEEYQCVCAEGWA--- 413 (514)
Q Consensus 347 ~Ce~~i~eC~~~~C~~~G~C~~----~~C~C~~Gy~G~~C~~---~~C~---~~C~~~G~C~~~~Gsy~C~C~~Gy~--- 413 (514)
.| .++++|...||.++|+|++ +.|.|++||+|..|+. ++|. ..|.+ +|++..|+|.|.|++||+
T Consensus 38 ~c-~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~ 114 (195)
T 1nfu_B 38 KY-KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLAD 114 (195)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECT
T ss_pred cC-CCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCC
Confidence 35 4688999899999999986 3899999999999974 6784 35764 999999999999999999
Q ss_pred -cCCCCccc
Q psy12789 414 -GVDCNIKL 421 (514)
Q Consensus 414 -G~~Ce~~~ 421 (514)
|..|+...
T Consensus 115 dG~~C~~~~ 123 (195)
T 1nfu_B 115 NGKACIPTG 123 (195)
T ss_dssp TSSCEEESS
T ss_pred CCCccccCC
Confidence 88887543
No 41
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.48 E-value=3.5e-08 Score=88.19 Aligned_cols=76 Identities=29% Similarity=0.768 Sum_probs=29.8
Q ss_pred CCCCCCCCCCCCCCCCCceeeC----CceecCCCCCccccCC---CCCC---CCCCCCCeeeccCCceeeecCCCcc---
Q psy12789 347 ECDIPASDCQYSDCSGHGSCVE----GTCHCQSGWKGIGCQE---AGCP---NACNRHGTCAFENEEYQCVCAEGWA--- 413 (514)
Q Consensus 347 ~Ce~~i~eC~~~~C~~~G~C~~----~~C~C~~Gy~G~~C~~---~~C~---~~C~~~G~C~~~~Gsy~C~C~~Gy~--- 413 (514)
.| .++++|...+|.++|+|++ +.|.|++||+|..|+. ++|. ..|.+ +|++..|+|.|.|++||+
T Consensus 38 ~c-~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~ 114 (134)
T 2vh0_B 38 KY-KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLAD 114 (134)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECT
T ss_pred cC-CCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECC
Confidence 35 4678898889999999986 3899999999999974 5684 35764 999999999999999999
Q ss_pred -cCCCCccccCCC
Q psy12789 414 -GVDCNIKLEMSC 425 (514)
Q Consensus 414 -G~~Ce~~~~~~C 425 (514)
|..|+......|
T Consensus 115 ~g~~C~~~~~~pC 127 (134)
T 2vh0_B 115 NGKACIPTGPYPC 127 (134)
T ss_dssp TSSCEEESSSSCT
T ss_pred CCCccCcCCCcCC
Confidence 888865444333
No 42
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.45 E-value=5.6e-08 Score=89.75 Aligned_cols=104 Identities=33% Similarity=0.809 Sum_probs=65.7
Q ss_pred CCCCcEEeC------CeE-ecCCCCcCCCCCCCCCCCCCCCCCeecCceeecCCCCCCCCCCC--CCCCCCCCCCCCC--
Q psy12789 295 CSGHGSCYL------GKC-DCIDGYEGTDCSKSVCPVLCSNHGKYGGGICHCENGWKGPECDI--PASDCQYSDCSGH-- 363 (514)
Q Consensus 295 C~~~G~C~~------g~C-~C~~Gf~G~~Ce~~~C~~~C~~~G~c~~~~C~C~~G~~G~~Ce~--~i~eC~~~~C~~~-- 363 (514)
|.+++.|.. +.| .|++||+|..|+. |.+||.|..+.. ....|..-.|.++
T Consensus 3 C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~-------------------C~~g~~g~~~~~~~~~~~C~~C~C~~~~~ 63 (162)
T 1klo_A 3 CPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL-------------------CDDGYFGDPLGSNGPVRLCRPCQCNDNID 63 (162)
T ss_dssp SCTTCCEEECSSSCCEEECSCCTTEESTTSCE-------------------ECTTEEEETTCTTSSCEEEEECCSTTCBC
T ss_pred CcCcCcccccCCCCCEEeCCCCCCCcCCCCcC-------------------CCCCCcCCcccccCCCCCCeeCcCCCCCC
Confidence 778899972 489 7999999999984 455555543321 0122333334443
Q ss_pred ----ceee--CCcee-cCCCCCccccCC---------------CCC-CCCCCCCC------eeeccCCceeeecCCCccc
Q psy12789 364 ----GSCV--EGTCH-CQSGWKGIGCQE---------------AGC-PNACNRHG------TCAFENEEYQCVCAEGWAG 414 (514)
Q Consensus 364 ----G~C~--~~~C~-C~~Gy~G~~C~~---------------~~C-~~~C~~~G------~C~~~~Gsy~C~C~~Gy~G 414 (514)
+.|. .+.|. |.++|+|..|+. ..| +-.|.+.| .|....| +|.|.+||+|
T Consensus 64 ~~~~~~C~~~tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG--~C~C~~g~~G 141 (162)
T 1klo_A 64 PNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTG--QCQCLPHVSG 141 (162)
T ss_dssp TTCSCCBCTTTCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTC--CCCBCTTEES
T ss_pred cccCCcccCCCCcccCCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCC--EeECCCCCcC
Confidence 3454 25673 777777777652 123 12466554 7765444 8999999999
Q ss_pred CCCCc
Q psy12789 415 VDCNI 419 (514)
Q Consensus 415 ~~Ce~ 419 (514)
..|+.
T Consensus 142 ~~Cd~ 146 (162)
T 1klo_A 142 RDCGT 146 (162)
T ss_dssp TTCCE
T ss_pred CCCCC
Confidence 99984
No 43
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.43 E-value=1e-07 Score=78.50 Aligned_cols=63 Identities=29% Similarity=0.798 Sum_probs=50.6
Q ss_pred CCCCCCCCC--CCCCceeeC----CceecCCCCC-----ccccC-CCCCC-C--CCCCCCeeeccCCceeeecCCCcccC
Q psy12789 351 PASDCQYSD--CSGHGSCVE----GTCHCQSGWK-----GIGCQ-EAGCP-N--ACNRHGTCAFENEEYQCVCAEGWAGV 415 (514)
Q Consensus 351 ~i~eC~~~~--C~~~G~C~~----~~C~C~~Gy~-----G~~C~-~~~C~-~--~C~~~G~C~~~~Gsy~C~C~~Gy~G~ 415 (514)
++++|...+ |. +++|++ +.|.|++||. |..|+ +++|. + .|. +++|++..|+|.|.|++||+|.
T Consensus 2 dideC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 2 DIDECRISPDLCG-RGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp CCCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred ccccccCCCCCCC-CCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCCCCEEEECcCCcccC
Confidence 577887655 85 469986 3899999997 67785 67883 3 475 5899999999999999999874
No 44
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.42 E-value=2.4e-08 Score=106.96 Aligned_cols=77 Identities=31% Similarity=0.813 Sum_probs=40.5
Q ss_pred eEecCCCCcCCCCCCCCCCCCCCCCCeec-CceeecCCCCCCCCCCCCCCCCCCCCCCCCceeeC-CceecCCCCCcccc
Q psy12789 305 KCDCIDGYEGTDCSKSVCPVLCSNHGKYG-GGICHCENGWKGPECDIPASDCQYSDCSGHGSCVE-GTCHCQSGWKGIGC 382 (514)
Q Consensus 305 ~C~C~~Gf~G~~Ce~~~C~~~C~~~G~c~-~~~C~C~~G~~G~~Ce~~i~eC~~~~C~~~G~C~~-~~C~C~~Gy~G~~C 382 (514)
.+.|..+|.|..|+...|...|.+ |.|. .+.|.|.+||.|..|+ ++.|.. +|.++|+|++ +.|.|.+||+|..|
T Consensus 378 p~~C~~~~~g~~c~~~~C~~~C~n-G~C~~~~~C~C~~G~~G~~C~--~~~C~~-~C~~~g~C~~~~~C~C~~G~~G~~C 453 (463)
T 2wg3_C 378 PEECRATVQPAQTLTSECSRLCRN-GYCTPTGKCCCSPGWEGDFCR--TAKCEP-ACRHGGVCVRPNKCLCKKGYLGPQC 453 (463)
T ss_dssp CGGGCCCCCCCCCCCCHHHHHCCS-EEECTTSCEEECTTEESTTSC--EECC----------------------------
T ss_pred cccCCCCCcCCCCccccccCCCCC-CccCCCCeECCCCCcCCCcCC--cCcCCC-CCCCCCEECCCCEEECCCCcccCCC
Confidence 467888999999998888777886 8885 4799999999999996 457866 9999999996 69999999999999
Q ss_pred CCC
Q psy12789 383 QEA 385 (514)
Q Consensus 383 ~~~ 385 (514)
+..
T Consensus 454 ~~~ 456 (463)
T 2wg3_C 454 EQV 456 (463)
T ss_dssp ---
T ss_pred CCC
Confidence 853
No 45
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.38 E-value=1.6e-07 Score=77.58 Aligned_cols=65 Identities=26% Similarity=0.734 Sum_probs=53.1
Q ss_pred CCCCCCCCC--CCCCceeeC----CceecCCCCC----ccccC-CCCC-CCCCCCCCeeeccCCceeeecCCCcccCCCC
Q psy12789 351 PASDCQYSD--CSGHGSCVE----GTCHCQSGWK----GIGCQ-EAGC-PNACNRHGTCAFENEEYQCVCAEGWAGVDCN 418 (514)
Q Consensus 351 ~i~eC~~~~--C~~~G~C~~----~~C~C~~Gy~----G~~C~-~~~C-~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce 418 (514)
++++|...+ | ++++|++ +.|.|++||+ |..|+ +++| .++|. ++|++..|+|.|.|+ ||.|..|+
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~~g~y~C~C~-g~~G~~~~ 77 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNYPGGYTCYCD-GKKGFKLA 77 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECCCSSSCCEECC-SSSCCBCC
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEccCCCEEEECC-CCcCCccc
Confidence 567887766 8 7789986 4899999998 77885 6788 47886 799999999999998 88887776
Q ss_pred c
Q psy12789 419 I 419 (514)
Q Consensus 419 ~ 419 (514)
.
T Consensus 78 ~ 78 (87)
T 1z6c_A 78 Q 78 (87)
T ss_dssp T
T ss_pred C
Confidence 4
No 46
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.33 E-value=1.8e-07 Score=101.47 Aligned_cols=85 Identities=27% Similarity=0.671 Sum_probs=36.7
Q ss_pred cCcee-ecCCCCCCCCCCCCCCCCCCCCCCCCceeeC--------CceecCCCCCccccCC------------CCC-CCC
Q psy12789 333 GGGIC-HCENGWKGPECDIPASDCQYSDCSGHGSCVE--------GTCHCQSGWKGIGCQE------------AGC-PNA 390 (514)
Q Consensus 333 ~~~~C-~C~~G~~G~~Ce~~i~eC~~~~C~~~G~C~~--------~~C~C~~Gy~G~~C~~------------~~C-~~~ 390 (514)
.+..| .|.+||.|..|+ ....|...+|.++|+|.+ +.|.|++||.|..|+. ++| +.+
T Consensus 416 ~G~~C~~C~~Gy~G~~c~-~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~ 494 (525)
T 4aqs_A 416 EGERCDVCKEGFYDLSAE-DPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCD 494 (525)
T ss_dssp ETTTTCEECTTEECCCTT-STTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC-------------------
T ss_pred CCCcccCCCCCCcCCCCC-CCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCC
Confidence 34455 688888888875 345676667766665532 4799999999999962 345 356
Q ss_pred CCCCCeeecc--CCceeeecCCCcccCCCC
Q psy12789 391 CNRHGTCAFE--NEEYQCVCAEGWAGVDCN 418 (514)
Q Consensus 391 C~~~G~C~~~--~Gsy~C~C~~Gy~G~~Ce 418 (514)
|.++|.|... ..+++|.|++||+|..|+
T Consensus 495 C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ce 524 (525)
T 4aqs_A 495 CDLGGALNNSCSEDSGQCSCLPHMIGRQCN 524 (525)
T ss_dssp ------------------------------
T ss_pred CCCCCccCCccCCCCCeeECCCCCcCCCCC
Confidence 7777765432 234589999999999997
No 47
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.28 E-value=8.7e-07 Score=89.41 Aligned_cols=63 Identities=33% Similarity=0.850 Sum_probs=53.8
Q ss_pred CCCCCCCCCCCCCceeeC----CceecCCCCCccccC--CCCCC----CCCCCCCeeeccCCceeeecCCCcccC
Q psy12789 351 PASDCQYSDCSGHGSCVE----GTCHCQSGWKGIGCQ--EAGCP----NACNRHGTCAFENEEYQCVCAEGWAGV 415 (514)
Q Consensus 351 ~i~eC~~~~C~~~G~C~~----~~C~C~~Gy~G~~C~--~~~C~----~~C~~~G~C~~~~Gsy~C~C~~Gy~G~ 415 (514)
++++|...||.++|+|.+ +.|.|++||.|..|+ +++|. ++|.+ .|.+..|+|.|.|++||.|.
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 467888899999999986 389999999999996 67894 57976 99999999999999999874
No 48
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.11 E-value=1.9e-06 Score=65.35 Aligned_cols=39 Identities=23% Similarity=0.494 Sum_probs=29.1
Q ss_pred CCCC-CCCCCCCCeee-----ccCCceeeecCCCcccCCCCcccc
Q psy12789 384 EAGC-PNACNRHGTCA-----FENEEYQCVCAEGWAGVDCNIKLE 422 (514)
Q Consensus 384 ~~~C-~~~C~~~G~C~-----~~~Gsy~C~C~~Gy~G~~Ce~~~~ 422 (514)
+++| +++|.++|+|. +..++|.|.|++||+|..|+..+.
T Consensus 8 ~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 8 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence 4567 46788888883 456789999999999999987653
No 49
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.09 E-value=8.2e-07 Score=76.37 Aligned_cols=71 Identities=25% Similarity=0.610 Sum_probs=27.9
Q ss_pred cCCCCCCCCCCCCCCCCCCC--CCCCCceeeC----CceecCCCCCc---cccC-CCCCC--CCCCCCCeeeccCCceee
Q psy12789 339 CENGWKGPECDIPASDCQYS--DCSGHGSCVE----GTCHCQSGWKG---IGCQ-EAGCP--NACNRHGTCAFENEEYQC 406 (514)
Q Consensus 339 C~~G~~G~~Ce~~i~eC~~~--~C~~~G~C~~----~~C~C~~Gy~G---~~C~-~~~C~--~~C~~~G~C~~~~Gsy~C 406 (514)
...||.|..|+ +++|... .|. ..|++ +.|.|++||.| ..|+ +++|. ++|. ++|++..|+|.|
T Consensus 18 ~~~~~~~~~Cd--~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~--~~C~n~~gsy~C 91 (107)
T 2w2n_E 18 TENLYFQGAMG--TNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKC 91 (107)
T ss_dssp --CCCCSCCBS--CCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEEC-------------------------
T ss_pred cCCCcCCCCCc--CccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccccccccCCCCCcC--CeeecCCCCEEE
Confidence 34677788884 6677643 453 47875 48999999987 6785 67884 6786 799999999999
Q ss_pred ecCCCcccC
Q psy12789 407 VCAEGWAGV 415 (514)
Q Consensus 407 ~C~~Gy~G~ 415 (514)
.|++||.|.
T Consensus 92 ~C~~Gy~~~ 100 (107)
T 2w2n_E 92 QCEEGFQLD 100 (107)
T ss_dssp ---------
T ss_pred ECCCCceEC
Confidence 999999874
No 50
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.03 E-value=6e-07 Score=82.26 Aligned_cols=117 Identities=21% Similarity=0.541 Sum_probs=70.4
Q ss_pred CCCCCCCee----cCceeecCCCCC----CCCCCCCCCC--CCCC--CC--CCCceeeC--------CceecCCCCC-cc
Q psy12789 324 VLCSNHGKY----GGGICHCENGWK----GPECDIPASD--CQYS--DC--SGHGSCVE--------GTCHCQSGWK-GI 380 (514)
Q Consensus 324 ~~C~~~G~c----~~~~C~C~~G~~----G~~Ce~~i~e--C~~~--~C--~~~G~C~~--------~~C~C~~Gy~-G~ 380 (514)
.+|. ++.| ++|.|.|++||. |..|+ ++++ |... +| .++++|++ +.|.|++||. |.
T Consensus 10 ~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~ 87 (162)
T 1uzk_A 10 TTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGT 87 (162)
T ss_dssp TSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETT
T ss_pred CCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCC
Confidence 3454 4555 678888888887 77885 5555 6432 23 24667764 3688888887 55
Q ss_pred ccCCCCCCCCCCCCCeeeccCCceeeecCC--CcccCCCCccccCCCCCCCCCCCCCCCCCCCC--CCCCCCeEecCCCc
Q psy12789 381 GCQEAGCPNACNRHGTCAFENEEYQCVCAE--GWAGVDCNIKLEMSCNDDTDNDKDGVTDCSDS--DCCSQPVCSDQPHI 456 (514)
Q Consensus 381 ~C~~~~C~~~C~~~G~C~~~~Gsy~C~C~~--Gy~G~~Ce~~~~~~C~d~~~~d~~g~~eC~d~--~C~~~~~C~n~~g~ 456 (514)
.|+. |.. +..++|.|.|++ ||+|..-.. .+.++++|... +|.+ +.|+++.+.
T Consensus 88 ~C~~------C~~-----~~~~~y~C~C~~g~G~~~~~~~~------------~c~dideC~~~~~~C~~-g~C~n~~gs 143 (162)
T 1uzk_A 88 PCEM------CPA-----VNTSEYKILCPGGEGFRPNPITV------------ILEDIDECQELPGLCQG-GKCINTFGS 143 (162)
T ss_dssp TTEE------CCC-----TTSHHHHHHCTTCTTEEECTTTC------------CEEECCHHHHCGGGGBT-SEEEECSSC
T ss_pred Cccc------CCC-----CCCCCceeECCCCCCcccCCCCC------------ccCccccccCCCCCcCC-CEeEcCCCC
Confidence 5542 211 234678888877 888753111 12356788753 5874 699998876
Q ss_pred -eeecCCCCce
Q psy12789 457 -MCLASNDPVE 466 (514)
Q Consensus 457 -~C~~~~~p~~ 466 (514)
.|.+..++..
T Consensus 144 y~C~C~~Gy~g 154 (162)
T 1uzk_A 144 FQCRCPTGYYL 154 (162)
T ss_dssp EEEECCTTCCB
T ss_pred EEeeCCCCccC
Confidence 6888776643
No 51
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.03 E-value=4e-06 Score=58.52 Aligned_cols=36 Identities=31% Similarity=0.887 Sum_probs=31.2
Q ss_pred CCCC-CCCCCCCCeeeccCCceeeecCCCcccCCCCc
Q psy12789 384 EAGC-PNACNRHGTCAFENEEYQCVCAEGWAGVDCNI 419 (514)
Q Consensus 384 ~~~C-~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~ 419 (514)
+++| +++|.++|+|++..++|.|.|++||+|..|++
T Consensus 3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred cccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence 4567 47899999999999999999999999998873
No 52
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.89 E-value=3.8e-07 Score=82.22 Aligned_cols=45 Identities=18% Similarity=0.594 Sum_probs=33.1
Q ss_pred eeeecCCCcc---cCCCCccccCCCCCCCCCCCCCCCCCCCC--CCCCCCeEecCCCc-eeecCCCCc
Q psy12789 404 YQCVCAEGWA---GVDCNIKLEMSCNDDTDNDKDGVTDCSDS--DCCSQPVCSDQPHI-MCLASNDPV 465 (514)
Q Consensus 404 y~C~C~~Gy~---G~~Ce~~~~~~C~d~~~~d~~g~~eC~d~--~C~~~~~C~n~~g~-~C~~~~~p~ 465 (514)
|.|.|++||+ |..|+ ++++|... +|.+ ++|+++.+. .|.+..++.
T Consensus 88 ~~C~C~~Gy~~~~g~~C~----------------dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~ 138 (147)
T 2w86_A 88 VDPICGKGYSRIKGTQCE----------------DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMT 138 (147)
T ss_dssp CCTTTCTTEEEEETTEEE----------------ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCC
T ss_pred CcccCCCccccCCCCccC----------------ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCc
Confidence 6889999995 66664 24578744 4874 599998876 688877664
No 53
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.82 E-value=1.4e-05 Score=72.27 Aligned_cols=67 Identities=22% Similarity=0.655 Sum_probs=47.7
Q ss_pred CCCCC-CCCCCCCCeeeccCCceeeecCCCcccCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeE-ecCCCc-eee
Q psy12789 383 QEAGC-PNACNRHGTCAFENEEYQCVCAEGWAGVDCNIKLEMSCNDDTDNDKDGVTDCSDSDCCSQPVC-SDQPHI-MCL 459 (514)
Q Consensus 383 ~~~~C-~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~~~~C~d~~~~d~~g~~eC~d~~C~~~~~C-~n~~g~-~C~ 459 (514)
++++| +++|.++|+|++..++|.|.|++||+|..|+.. ++|....+.....| .+..+. .|.
T Consensus 47 dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~----------------deC~~~~~~C~~~C~~n~~g~y~C~ 110 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELD----------------ATCNIKNGRCKQFCKTGADSKVLCS 110 (146)
T ss_dssp ---CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEE----------------CCTTSGGGSCSSBCCCCSSSCCCCB
T ss_pred CcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCC----------------ccccCCCCCCcCCCCCCCCCCEEeE
Confidence 36788 588999999999999999999999999998743 35554322222378 776654 588
Q ss_pred cCCCCc
Q psy12789 460 ASNDPV 465 (514)
Q Consensus 460 ~~~~p~ 465 (514)
+..++.
T Consensus 111 C~~Gy~ 116 (146)
T 1x7a_L 111 CTTGYR 116 (146)
T ss_dssp CCTTEE
T ss_pred cCCCcE
Confidence 776654
No 54
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.81 E-value=1.8e-05 Score=68.30 Aligned_cols=66 Identities=24% Similarity=0.586 Sum_probs=48.4
Q ss_pred CCCCCCCCCeeeccCCceeeecCCCcccCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEecCCCc-eeecCCCCc
Q psy12789 387 CPNACNRHGTCAFENEEYQCVCAEGWAGVDCNIKLEMSCNDDTDNDKDGVTDCSDSDCCSQPVCSDQPHI-MCLASNDPV 465 (514)
Q Consensus 387 C~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~~~~C~d~~~~d~~g~~eC~d~~C~~~~~C~n~~g~-~C~~~~~p~ 465 (514)
|...|.++|+|++..++|.|.|++||+|..|+...+ +++|.........+|+++.+. .|.+..++.
T Consensus 18 C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~-------------~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~ 84 (114)
T 1aut_L 18 CASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVS-------------FLNCSLDNGGCTHYCLEEVGWRRCSCAPGYK 84 (114)
T ss_dssp SSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECC-------------SSSSSSGGGGCSSEEEECSSSEEEECCTTEE
T ss_pred ccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCc-------------CCcCcCCCCCCCCEeECCCCCEEeECCCCee
Confidence 445599999999999999999999999999875422 235654322223389998865 688877665
No 55
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.78 E-value=1.7e-05 Score=71.28 Aligned_cols=68 Identities=21% Similarity=0.475 Sum_probs=49.9
Q ss_pred CCCCC-CCCCCCCCeeeccCCceeeecCCCcccCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCC---eEecCCC-c-
Q psy12789 383 QEAGC-PNACNRHGTCAFENEEYQCVCAEGWAGVDCNIKLEMSCNDDTDNDKDGVTDCSDSDCCSQP---VCSDQPH-I- 456 (514)
Q Consensus 383 ~~~~C-~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~~~~C~d~~~~d~~g~~eC~d~~C~~~~---~C~n~~g-~- 456 (514)
++++| +++|.++|+|++..++|.|.|++||+|..|+..+. +|...+|.+++ .|.+..+ .
T Consensus 46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~---------------~c~~c~~~~~~C~~~C~~~~g~~y 110 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKD---------------DQLICVNENGGCEQYCSDHTGTKR 110 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGG---------------GCCSTTTGGGGCSSEEECCTTSCC
T ss_pred ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCcc---------------ccccccCCCCCccCEeECCCCCCE
Confidence 46778 58899999999999999999999999999986422 22222233333 8998876 4
Q ss_pred eeecCCCCc
Q psy12789 457 MCLASNDPV 465 (514)
Q Consensus 457 ~C~~~~~p~ 465 (514)
.|.+..++.
T Consensus 111 ~C~C~~Gy~ 119 (142)
T 2c4f_L 111 SCRCHEGYS 119 (142)
T ss_dssp EEECCTTEE
T ss_pred EEECCCCce
Confidence 688876654
No 56
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.76 E-value=1.8e-05 Score=64.32 Aligned_cols=64 Identities=23% Similarity=0.653 Sum_probs=49.2
Q ss_pred CCCCC--CCCCCCCeeeccCCceeeecCCCcc--cCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCCCCeEecCCCc-e
Q psy12789 384 EAGCP--NACNRHGTCAFENEEYQCVCAEGWA--GVDCNIKLEMSCNDDTDNDKDGVTDCS-DSDCCSQPVCSDQPHI-M 457 (514)
Q Consensus 384 ~~~C~--~~C~~~G~C~~~~Gsy~C~C~~Gy~--G~~Ce~~~~~~C~d~~~~d~~g~~eC~-d~~C~~~~~C~n~~g~-~ 457 (514)
+++|. ++|.+ |+|++..++|.|.|++||+ |..|+ ++++|. ..+|.+ +.|.++.+. .
T Consensus 5 ideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~----------------dideC~~~~~C~~-~~C~n~~g~y~ 66 (82)
T 1emn_A 5 MDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECV----------------DTDECSVGNPCGN-GTCKNVIGGFE 66 (82)
T ss_dssp CCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEE----------------ECCGGGTCCTTSS-SCEEECSSSEE
T ss_pred cccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccC----------------CcccccCCCCCCC-CEeECCCCCEE
Confidence 56773 68974 8999999999999999997 66663 345776 567875 599998875 6
Q ss_pred eecCCCCc
Q psy12789 458 CLASNDPV 465 (514)
Q Consensus 458 C~~~~~p~ 465 (514)
|.+..++.
T Consensus 67 C~C~~G~~ 74 (82)
T 1emn_A 67 CTCEEGFE 74 (82)
T ss_dssp ECCSSSSC
T ss_pred eECCCCeE
Confidence 88876654
No 57
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.74 E-value=5.2e-06 Score=78.94 Aligned_cols=73 Identities=25% Similarity=0.617 Sum_probs=17.1
Q ss_pred CCccccCCCCC-CCCCCCCCeeeccCCceeeecCCCcccCCCCccccCCCCCCCCCCCCCCCCCCCC--CCCCCCeEecC
Q psy12789 377 WKGIGCQEAGC-PNACNRHGTCAFENEEYQCVCAEGWAGVDCNIKLEMSCNDDTDNDKDGVTDCSDS--DCCSQPVCSDQ 453 (514)
Q Consensus 377 y~G~~C~~~~C-~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~~~~C~d~~~~d~~g~~eC~d~--~C~~~~~C~n~ 453 (514)
|.+.-.++++| +++|.++|+|++..++|.|.|++||+|..|+..+. ++|... +|.. .|.+.
T Consensus 35 fw~~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~--------------deC~~~~~~C~~--~C~n~ 98 (195)
T 1nfu_B 35 FWNKYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTR--------------KLCSLDNGDCDQ--FCHEE 98 (195)
T ss_dssp ----------------------------------------------C--------------CGGGTGGGGCSS--EEEEE
T ss_pred ccccCCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceecccccccc--------------ccccCCCCCCCC--EeECC
Confidence 33333457788 58899999999999999999999999999975431 245543 3443 89987
Q ss_pred CCc-eeecCCCCc
Q psy12789 454 PHI-MCLASNDPV 465 (514)
Q Consensus 454 ~g~-~C~~~~~p~ 465 (514)
.+. .|.+..++.
T Consensus 99 ~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 99 QNSVVCSCARGYT 111 (195)
T ss_dssp TTEEEEECCTTEE
T ss_pred CCCeEEECCCCce
Confidence 765 588877655
No 58
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.73 E-value=1.1e-05 Score=61.20 Aligned_cols=40 Identities=23% Similarity=0.576 Sum_probs=33.6
Q ss_pred CCCCCCCCCCCCCCCCCCCceee-----C----CceecCCCCCccccCC
Q psy12789 345 GPECDIPASDCQYSDCSGHGSCV-----E----GTCHCQSGWKGIGCQE 384 (514)
Q Consensus 345 G~~Ce~~i~eC~~~~C~~~G~C~-----~----~~C~C~~Gy~G~~C~~ 384 (514)
|..|+.++++|.+.||.++|+|. + +.|.|++||+|..|+.
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence 56788899999999999999993 2 3899999999999974
No 59
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.71 E-value=3.8e-06 Score=62.78 Aligned_cols=42 Identities=29% Similarity=0.661 Sum_probs=34.9
Q ss_pred ceecCCCCCccccCCCCCCCCCCCCCeeec----cCCceeeecCCCcccCCCCcc
Q psy12789 370 TCHCQSGWKGIGCQEAGCPNACNRHGTCAF----ENEEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 370 ~C~C~~Gy~G~~C~~~~C~~~C~~~G~C~~----~~Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
.|.|++||+ .++|.++|+|.. ..++|.|.|++||+|..|+..
T Consensus 4 ~C~C~~g~~---------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 4 TYKCPETFD---------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp CBCCCHHHH---------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred eeECCCCCc---------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 578888886 367999999986 346799999999999999864
No 60
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.69 E-value=3.2e-05 Score=55.83 Aligned_cols=32 Identities=25% Similarity=0.611 Sum_probs=28.5
Q ss_pred CCCCCCeee--ccCCceeeecCCCcccCCCCccc
Q psy12789 390 ACNRHGTCA--FENEEYQCVCAEGWAGVDCNIKL 421 (514)
Q Consensus 390 ~C~~~G~C~--~~~Gsy~C~C~~Gy~G~~Ce~~~ 421 (514)
+|.++|+|. +..++|.|.|++||+|..|+..+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence 899999998 66789999999999999998653
No 61
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.68 E-value=3.6e-05 Score=77.47 Aligned_cols=65 Identities=22% Similarity=0.655 Sum_probs=50.2
Q ss_pred CCCC-CCCCCCCCeeeccCCceeeecCCCcccCCCCccccCCCCCCCCCCCCCCCCCCC---CCCCCCCeEecCCCc-ee
Q psy12789 384 EAGC-PNACNRHGTCAFENEEYQCVCAEGWAGVDCNIKLEMSCNDDTDNDKDGVTDCSD---SDCCSQPVCSDQPHI-MC 458 (514)
Q Consensus 384 ~~~C-~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~~~~C~d~~~~d~~g~~eC~d---~~C~~~~~C~n~~g~-~C 458 (514)
+++| .++|.++|+|.+..++|.|.|++||.|..|+.. +++|.. .+|.+ .|.+..+. .|
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~---------------~~eC~~~~~~~C~~--~C~~~~g~~~C 67 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELA---------------KNECHPERTDGCQH--FCLPGQESYTC 67 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCC---------------SSSCCTTCTTSCSS--EEECCSSSCEE
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccC---------------cccCCCCCCCCCcC--ccccCCCeeEE
Confidence 4667 478999999999999999999999999999753 346765 56765 89887765 57
Q ss_pred ecCCCCc
Q psy12789 459 LASNDPV 465 (514)
Q Consensus 459 ~~~~~p~ 465 (514)
.|..+..
T Consensus 68 ~C~~g~~ 74 (317)
T 3h5c_B 68 SCAQGYR 74 (317)
T ss_dssp ECCTTEE
T ss_pred ecccccc
Confidence 7766543
No 62
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.68 E-value=3.2e-05 Score=57.89 Aligned_cols=38 Identities=32% Similarity=0.829 Sum_probs=32.2
Q ss_pred CCCCC-C---CCCCCCeee--ccCCceeeecCCCcccCCCCccc
Q psy12789 384 EAGCP-N---ACNRHGTCA--FENEEYQCVCAEGWAGVDCNIKL 421 (514)
Q Consensus 384 ~~~C~-~---~C~~~G~C~--~~~Gsy~C~C~~Gy~G~~Ce~~~ 421 (514)
+++|. + +|.++|+|+ +..++|.|.|++||+|..|+..+
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 46 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCS
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccC
Confidence 45674 3 899999999 77889999999999999998754
No 63
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.65 E-value=1.4e-05 Score=68.59 Aligned_cols=73 Identities=18% Similarity=0.497 Sum_probs=35.1
Q ss_pred cCCCCCccccCCCCCC---CCCCCCCeeeccCCceeeecCCCccc---CCCCccccCCCCCCCCCCCCCCCCCCC-CCCC
Q psy12789 373 CQSGWKGIGCQEAGCP---NACNRHGTCAFENEEYQCVCAEGWAG---VDCNIKLEMSCNDDTDNDKDGVTDCSD-SDCC 445 (514)
Q Consensus 373 C~~Gy~G~~C~~~~C~---~~C~~~G~C~~~~Gsy~C~C~~Gy~G---~~Ce~~~~~~C~d~~~~d~~g~~eC~d-~~C~ 445 (514)
...||.|..|++++|. ..|. .+|++..++|.|.|++||+| ..|+ ++++|.. .+|.
T Consensus 18 ~~~~~~~~~Cd~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~----------------dideC~~~~~C~ 79 (107)
T 2w2n_E 18 TENLYFQGAMGTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE----------------DIDECQDPDTCS 79 (107)
T ss_dssp --CCCCSCCBSCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEE----------------C-----------
T ss_pred cCCCcCCCCCcCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccc----------------cccccCCCCCcC
Confidence 4578899999999995 3564 58999999999999999998 3343 3567874 5674
Q ss_pred CCCeEecCCCc-eeecCCCCc
Q psy12789 446 SQPVCSDQPHI-MCLASNDPV 465 (514)
Q Consensus 446 ~~~~C~n~~g~-~C~~~~~p~ 465 (514)
+.|+++.+. .|.+..++.
T Consensus 80 --~~C~n~~gsy~C~C~~Gy~ 98 (107)
T 2w2n_E 80 --QLCVNLEGGYKCQCEEGFQ 98 (107)
T ss_dssp ---------------------
T ss_pred --CeeecCCCCEEEECCCCce
Confidence 689998865 587766553
No 64
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.65 E-value=1.5e-05 Score=65.27 Aligned_cols=69 Identities=19% Similarity=0.528 Sum_probs=47.8
Q ss_pred CCCCC---CCCCCCCeeeccCCceeeecCCCcccCCCCccccCCCCCCCCCCCCCCCCCCCCC--CCCCCeEecCCCc-e
Q psy12789 384 EAGCP---NACNRHGTCAFENEEYQCVCAEGWAGVDCNIKLEMSCNDDTDNDKDGVTDCSDSD--CCSQPVCSDQPHI-M 457 (514)
Q Consensus 384 ~~~C~---~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~~~~C~d~~~~d~~g~~eC~d~~--C~~~~~C~n~~g~-~ 457 (514)
+++|. +.|. +|+|++..++|.|.|++||++..-.. ..+.++++|...+ |. ++.|.++.+. .
T Consensus 3 ideC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~~~~g-----------~~C~dideC~~~~~~C~-~~~C~n~~g~y~ 69 (86)
T 1lmj_A 3 IDECRISPDLCG-RGQCVNTPGDFECKCDEGYESGFMMM-----------KNCMDIDECQRDPLLCR-GGVCHNTEGSYR 69 (86)
T ss_dssp CCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECTTTS-----------SSEEECCHHHHCSSTTT-TSEEEEETTEEE
T ss_pred cccccCCCCCCC-CCEEECCCCCEEeeCCCCcCccCCCC-----------CccCCcccccCCCCcCC-CCEeEcCCCCEE
Confidence 56783 3495 46999999999999999998421100 0112456887665 54 5799998876 6
Q ss_pred eecCCCCc
Q psy12789 458 CLASNDPV 465 (514)
Q Consensus 458 C~~~~~p~ 465 (514)
|.+..++.
T Consensus 70 C~C~~G~~ 77 (86)
T 1lmj_A 70 CECPPGHQ 77 (86)
T ss_dssp EESCTTSC
T ss_pred EECcCCcc
Confidence 88877654
No 65
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=97.61 E-value=4.2e-06 Score=85.55 Aligned_cols=74 Identities=16% Similarity=0.149 Sum_probs=50.8
Q ss_pred CCcceecceeccccceeeEEeeecCCCCceeEeeccCCCCCcccceeEEEeeCccccccccccCCCCCCCCcce---ecC
Q psy12789 110 PSFQFWNSDFNIEQSAFFRFNFDLPRGSNFAVYGRRNVAPSITNYDFSEFIKDNTRTSAFFRFNFDLPRGSNFA---VYG 186 (514)
Q Consensus 110 pp~~fW~~~~~~~~p~~~~fn~tl~~~a~~~vygrr~~~ps~tqydf~Ell~G~~~~~~~~~~~~~~~~~~~~~---~~g 186 (514)
-+.++|+|+-+...|.+..+||||.+|+.| ||..-. + +.++..+|..+.++ .+|
T Consensus 85 ~~~TwWQS~~~~~~~~p~~VnlTL~L~k~f------------------elt~~i--i---l~F~spRP~sm~ierS~D~G 141 (338)
T 3tbd_A 85 GLATYWQSITWSRYPSPLEANITLSWNKTV------------------ELTDDV--V---MTFEYGRPTVMVLEKSLDNG 141 (338)
T ss_dssp TCCCCEEBCCSTTTTSCCCEEEEEEEEEEE------------------EECSCE--E---EEESSCCCSEEEEEEESSTT
T ss_pred CCCceeccCcccCCCCCccceEEEcCCCeE------------------EEEEEE--E---eecCCCCCCeEEEEeccCCC
Confidence 467999999999999999999999999988 333211 1 22223333333333 389
Q ss_pred ccccCCCcCccceeeeeeCCcccCc
Q psy12789 187 RRNVAPSITNYDFSEFIKGGKINQK 211 (514)
Q Consensus 187 ~~~~~~~~~~~~~~~~i~~g~~~~~ 211 (514)
++|+ +|+|++..+...+|+.
T Consensus 142 ~tW~-----P~QYfA~dC~~~Fg~~ 161 (338)
T 3tbd_A 142 RTWQ-----PYQFYAEDCMEAFGMS 161 (338)
T ss_dssp SSCE-----EEEEEESSHHHHHSCC
T ss_pred CCce-----eehhhhhhhHHhcCCC
Confidence 9998 8998887655555543
No 66
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.59 E-value=0.00024 Score=79.50 Aligned_cols=115 Identities=26% Similarity=0.682 Sum_probs=76.1
Q ss_pred CCCCcEEeC--CeEe----cCCCCcCCCCCC-CCCC----CCCCCCCeec------CceeecCCCCCCCCCCCCCCCCCC
Q psy12789 295 CSGHGSCYL--GKCD----CIDGYEGTDCSK-SVCP----VLCSNHGKYG------GGICHCENGWKGPECDIPASDCQY 357 (514)
Q Consensus 295 C~~~G~C~~--g~C~----C~~Gf~G~~Ce~-~~C~----~~C~~~G~c~------~~~C~C~~G~~G~~Ce~~i~eC~~ 357 (514)
|. +|.|+. ..|. |..|.-...|.. ..|. ..|.+ |.|. .+.+.|..|..+..++.++++|..
T Consensus 222 C~-~g~Ci~~~~~Cdg~~dC~dgsde~~C~~~~~C~~~~~~~C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~ 299 (699)
T 1n7d_A 222 CS-DGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKECGTNECLD 299 (699)
T ss_dssp SS-SSCEEETTCCSSSCCCSSSSCSSSSTTCCCCCCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTS
T ss_pred cC-CCceeeeecccCCCCCCCCCCccCCCCCCCcccCCCceecCC-CcEeCCcccccccceecCcccccccccccccccc
Confidence 54 567773 3454 777777767753 2342 13432 3331 245667777665544345677754
Q ss_pred C--CCCCCceeeC----CceecCCCCC---ccccC-CCCCC--CCCCCCCeeeccCCceeeecCCCcccC
Q psy12789 358 S--DCSGHGSCVE----GTCHCQSGWK---GIGCQ-EAGCP--NACNRHGTCAFENEEYQCVCAEGWAGV 415 (514)
Q Consensus 358 ~--~C~~~G~C~~----~~C~C~~Gy~---G~~C~-~~~C~--~~C~~~G~C~~~~Gsy~C~C~~Gy~G~ 415 (514)
. .|. ..|.+ +.|.|++||. |..|+ +++|. +.|+ +.|++..|+|.|.|.+||.+.
T Consensus 300 ~~~~C~--~~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 300 NNGGCS--HVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp STTTSC--TTCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred cccCcC--CCcccCCCCcEEeCCCCeEcCCCCcccCccccCCCCccc--cccccCCCCeeeeeecccccC
Confidence 3 343 46765 4899999998 77885 78894 5785 589999999999999999863
No 67
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.59 E-value=2.8e-05 Score=81.03 Aligned_cols=60 Identities=23% Similarity=0.675 Sum_probs=46.9
Q ss_pred CCCCCCCCCCceeeC----CceecCCCCC---ccccC-CCCCC--CCCCCCCeeeccCCceeeecCCCcccC
Q psy12789 354 DCQYSDCSGHGSCVE----GTCHCQSGWK---GIGCQ-EAGCP--NACNRHGTCAFENEEYQCVCAEGWAGV 415 (514)
Q Consensus 354 eC~~~~C~~~G~C~~----~~C~C~~Gy~---G~~C~-~~~C~--~~C~~~G~C~~~~Gsy~C~C~~Gy~G~ 415 (514)
+|...+|...+.|.+ +.|.|++||. |..|+ +++|. .+|.+ .|.+..|+|.|.|.+||.+.
T Consensus 2 eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 2 ECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp CTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCC
T ss_pred cccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCCC--ccCCCccceeeecccccccc
Confidence 565556555668875 3899999997 77886 68884 67864 89999999999999999864
No 68
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.57 E-value=1.3e-05 Score=71.30 Aligned_cols=68 Identities=26% Similarity=0.690 Sum_probs=17.0
Q ss_pred cCCCCC-CCCCCCCCeeeccCCceeeecCCCcccCCCCccccCCCCCCCCCCCCCCCCCCCC--CCCCCCeEecCCCc-e
Q psy12789 382 CQEAGC-PNACNRHGTCAFENEEYQCVCAEGWAGVDCNIKLEMSCNDDTDNDKDGVTDCSDS--DCCSQPVCSDQPHI-M 457 (514)
Q Consensus 382 C~~~~C-~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~~~~C~d~~~~d~~g~~eC~d~--~C~~~~~C~n~~g~-~ 457 (514)
.++++| +++|.++|+|++..++|.|.|++||+|..|+..+. ++|... +|.. .|.+..+. .
T Consensus 40 ~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~--------------d~C~~~~~~C~~--~C~~~~g~y~ 103 (134)
T 2vh0_B 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTR--------------KLCSLDNGDCDQ--FCHEEQNSVV 103 (134)
T ss_dssp -----------------------------------------C--------------CGGGTGGGGCSS--EEEEETTEEE
T ss_pred CCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCC--------------CccccCCCCCCC--EeECCCCCEE
Confidence 346788 47899999999999999999999999999875331 245543 3443 89987765 6
Q ss_pred eecCCCCc
Q psy12789 458 CLASNDPV 465 (514)
Q Consensus 458 C~~~~~p~ 465 (514)
|.+..++.
T Consensus 104 C~C~~Gy~ 111 (134)
T 2vh0_B 104 CSCARGYT 111 (134)
T ss_dssp EECCTTEE
T ss_pred EECCCCcE
Confidence 88877654
No 69
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.54 E-value=0.00026 Score=79.17 Aligned_cols=145 Identities=23% Similarity=0.644 Sum_probs=90.3
Q ss_pred CcEEeC--CeE----ecCCCCcCCCCCCCCCCC---CCCCCCee--cCceee----cCCCCCCCCCCCCCCCCC---CCC
Q psy12789 298 HGSCYL--GKC----DCIDGYEGTDCSKSVCPV---LCSNHGKY--GGGICH----CENGWKGPECDIPASDCQ---YSD 359 (514)
Q Consensus 298 ~G~C~~--g~C----~C~~Gf~G~~Ce~~~C~~---~C~~~G~c--~~~~C~----C~~G~~G~~Ce~~i~eC~---~~~ 359 (514)
+|.|+. ..| .|..|.-...|....|.. .|. .|.| ....|. |..|..+..|.. ...|. ...
T Consensus 185 ~g~Ci~~~~~CDg~~dC~dgsDE~~C~~~~C~~~~f~C~-~g~Ci~~~~~Cdg~~dC~dgsde~~C~~-~~~C~~~~~~~ 262 (699)
T 1n7d_A 185 SGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCKDMSDEVGCVN-VTLCEGPNKFK 262 (699)
T ss_dssp SSCCCSTTCTTSSSCCSTTSCSSCSCCCCCCCSSEEESS-SSCEEETTCCSSSCCCSSSSCSSSSTTC-CCCCCSTTCCC
T ss_pred CCceEechhccCCCCCCCCCcccccCCCcccCCCcEecC-CCceeeeecccCCCCCCCCCCccCCCCC-CCcccCCCcee
Confidence 346763 345 677777666776545532 344 2344 344554 777777777743 44562 135
Q ss_pred CCCCceeeC------CceecCCCCCcc--ccCCCCCC---CCCCCCCeeeccCCceeeecCCCccc---CCCCccccCCC
Q psy12789 360 CSGHGSCVE------GTCHCQSGWKGI--GCQEAGCP---NACNRHGTCAFENEEYQCVCAEGWAG---VDCNIKLEMSC 425 (514)
Q Consensus 360 C~~~G~C~~------~~C~C~~Gy~G~--~C~~~~C~---~~C~~~G~C~~~~Gsy~C~C~~Gy~G---~~Ce~~~~~~C 425 (514)
|.+ |.|++ +.+.|..|..+. .|.+++|. ..|. +.|.+..++|.|.|++||.+ ..|+
T Consensus 263 C~~-g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~--~~C~~~~~~~~C~C~~G~~~~~~~~C~------- 332 (699)
T 1n7d_A 263 CHS-GECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCS--HVCNDLKIGYECLCPDGFQLVAQRRCE------- 332 (699)
T ss_dssp CTT-SCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSC--TTCCCCTTCCCCCCCSSSCCCSSSCCC-------
T ss_pred cCC-CcEeCCcccccccceecCcccccccccccccccccccCcC--CCcccCCCCcEEeCCCCeEcCCCCccc-------
Confidence 654 67875 356788877654 57777884 2464 57999999999999999984 4443
Q ss_pred CCCCCCCCCCCCCCCC-CCCCCCCeEecCCCc-eeecCCCCc
Q psy12789 426 NDDTDNDKDGVTDCSD-SDCCSQPVCSDQPHI-MCLASNDPV 465 (514)
Q Consensus 426 ~d~~~~d~~g~~eC~d-~~C~~~~~C~n~~g~-~C~~~~~p~ 465 (514)
++++|.. .+|. ..|.++.+. .|.+..++.
T Consensus 333 ---------dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~ 363 (699)
T 1n7d_A 333 ---------DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQ 363 (699)
T ss_dssp ---------CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCB
T ss_pred ---------CccccCCCCccc--cccccCCCCeeeeeecccc
Confidence 3557763 3553 478887765 466655443
No 70
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.52 E-value=7.1e-05 Score=85.03 Aligned_cols=106 Identities=19% Similarity=0.537 Sum_probs=57.3
Q ss_pred ecCCCCCCCCCCCCCCCCC---CCCCCCCceeeC------CceecCCCCCcc--ccCCCCCC---CCCCCCCeeeccCCc
Q psy12789 338 HCENGWKGPECDIPASDCQ---YSDCSGHGSCVE------GTCHCQSGWKGI--GCQEAGCP---NACNRHGTCAFENEE 403 (514)
Q Consensus 338 ~C~~G~~G~~Ce~~i~eC~---~~~C~~~G~C~~------~~C~C~~Gy~G~--~C~~~~C~---~~C~~~G~C~~~~Gs 403 (514)
.|..|..+..|. ....|. ..+|.+ |.|++ +.+.|..|+.+. .|..++|. ..|. ..|.+..++
T Consensus 257 dC~dgsDE~~C~-~~~~C~~~~~~~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~~C~~~~~~C~--~~C~~~~~~ 332 (791)
T 3m0c_C 257 DCKDMSDEVGCV-NVTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCS--HVCNDLKIG 332 (791)
T ss_dssp -----------------CCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCTTBSCCSTTTGGGGCS--SEEEECSBS
T ss_pred ccccccccCccc-ccccccCCCccccCC-CcccccccccCCccccccccCccccccccccccccccCcc--ccccCCCCC
Confidence 366676666774 234453 225754 67875 256788887653 36666674 2343 489999999
Q ss_pred eeeecCCCcc---cCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEecCCCc-eeecCCCC
Q psy12789 404 YQCVCAEGWA---GVDCNIKLEMSCNDDTDNDKDGVTDCSDSDCCSQPVCSDQPHI-MCLASNDP 464 (514)
Q Consensus 404 y~C~C~~Gy~---G~~Ce~~~~~~C~d~~~~d~~g~~eC~d~~C~~~~~C~n~~g~-~C~~~~~p 464 (514)
|.|.|++||. |..|+ ++++|..+ +.....|.++.+. .|.+..++
T Consensus 333 y~C~C~~Gy~l~~g~~C~----------------dideC~~~-~~C~~~C~n~~gsy~C~C~~Gy 380 (791)
T 3m0c_C 333 YECLCPDGFQLVAQRRCE----------------DIDECQDP-DTCSQLCVNLEGGYKCQCEEGF 380 (791)
T ss_dssp EEEECCTTCEEETTTEEE----------------CCCCCSSS-SSCTTTCCBCSSCBCCCCCSSE
T ss_pred cccCCCCCCccCCCCccc----------------cCcccCCC-CCCCCeeecCCCCceeecCCCC
Confidence 9999999996 44443 35677632 2224578887765 46666544
No 71
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.50 E-value=2.6e-05 Score=64.08 Aligned_cols=59 Identities=24% Similarity=0.785 Sum_probs=45.5
Q ss_pred CCCCC-CC--CCCCCeeeccCCceeeecCCCcc----cCCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCCeEecCCCc
Q psy12789 384 EAGCP-NA--CNRHGTCAFENEEYQCVCAEGWA----GVDCNIKLEMSCNDDTDNDKDGVTDCSDSDCCSQPVCSDQPHI 456 (514)
Q Consensus 384 ~~~C~-~~--C~~~G~C~~~~Gsy~C~C~~Gy~----G~~Ce~~~~~~C~d~~~~d~~g~~eC~d~~C~~~~~C~n~~g~ 456 (514)
+++|. ++ | ++++|++..++|.|.|++||+ |..|+ ++++|...+|. +.|.++.+.
T Consensus 3 ideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~----------------dideC~~~~C~--~~C~n~~g~ 63 (87)
T 1z6c_A 3 VDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE----------------DIDECSENMCA--QLCVNYPGG 63 (87)
T ss_dssp SCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE----------------CCCHHHHSCCS--SEECCCSSS
T ss_pred cccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCC----------------CcCeeCCCCCC--CEEEccCCC
Confidence 46773 33 8 789999999999999999999 44442 35678777886 699998875
Q ss_pred -eeecC
Q psy12789 457 -MCLAS 461 (514)
Q Consensus 457 -~C~~~ 461 (514)
.|.++
T Consensus 64 y~C~C~ 69 (87)
T 1z6c_A 64 YTCYCD 69 (87)
T ss_dssp CCEECC
T ss_pred EEEECC
Confidence 68875
No 72
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.49 E-value=2e-05 Score=81.49 Aligned_cols=66 Identities=24% Similarity=0.749 Sum_probs=17.8
Q ss_pred CCCCCCCCCCCCCceeeC----CceecCCCCC----ccccC-CCCCC--CCCCCCCeeeccCCceeeecCCCcc----cC
Q psy12789 351 PASDCQYSDCSGHGSCVE----GTCHCQSGWK----GIGCQ-EAGCP--NACNRHGTCAFENEEYQCVCAEGWA----GV 415 (514)
Q Consensus 351 ~i~eC~~~~C~~~G~C~~----~~C~C~~Gy~----G~~C~-~~~C~--~~C~~~G~C~~~~Gsy~C~C~~Gy~----G~ 415 (514)
++++|...+|.....|.+ +.|.|++||. |..|+ +++|. .+|.+ .|.+..|+|.|.|.+||. |.
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~l~~d~~ 79 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQ--GCTNSEGAFQCWCEAGYELRPDRR 79 (386)
T ss_dssp --------------------------------------------------CCTT--EEC-----CCEECCTTEEECTTSS
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccC--cCCCCCCCCeEEECCCceEcCCCC
Confidence 356776555433447764 3799999998 78885 57883 67874 399999999999999998 66
Q ss_pred CCC
Q psy12789 416 DCN 418 (514)
Q Consensus 416 ~Ce 418 (514)
.|.
T Consensus 80 ~C~ 82 (386)
T 3v65_B 80 SCK 82 (386)
T ss_dssp CEE
T ss_pred eEC
Confidence 664
No 73
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.45 E-value=3.2e-05 Score=59.83 Aligned_cols=37 Identities=35% Similarity=0.804 Sum_probs=31.8
Q ss_pred CCCC-CCCCCCC--CeeeccCCceeeecCCCcc-cCCCCcc
Q psy12789 384 EAGC-PNACNRH--GTCAFENEEYQCVCAEGWA-GVDCNIK 420 (514)
Q Consensus 384 ~~~C-~~~C~~~--G~C~~~~Gsy~C~C~~Gy~-G~~Ce~~ 420 (514)
+++| +++|.++ |+|++..++|.|.|++||+ |..|+..
T Consensus 11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~~ 51 (61)
T 2k2s_B 11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTGN 51 (61)
T ss_dssp CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSSC
T ss_pred CCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCCC
Confidence 3566 4789988 8999999999999999999 9999743
No 74
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=97.41 E-value=0.00021 Score=71.41 Aligned_cols=74 Identities=20% Similarity=0.342 Sum_probs=39.6
Q ss_pred CCCeeeEEEEEEEEEeecCCeEEEeEecCCcceeEEEEEEe-ccccccCCC---CCCCCCCcEEeCCeEecCCCCcCCCC
Q psy12789 242 DQTTETNFVEVQILKFLMSGKWFLSVYNDDVKTHEIKLLIK-EAEGVSSTC---PNGCSGHGSCYLGKCDCIDGYEGTDC 317 (514)
Q Consensus 242 ~~~~~~~~~~~~~~~~l~~G~~~l~~~nd~~~~~~v~~~~~-~~~~~~~~C---p~~C~~~G~C~~g~C~C~~Gf~G~~C 317 (514)
+|...+|.+++....+.......+.... -.....+.+... ++++ ..| ...|+++|.|..|.|.|.+||.|..|
T Consensus 144 iG~~v~f~v~v~~~~C~~~~~~~I~p~G-~~e~~~v~~~~~C~C~C--~~~~~~~~~C~g~G~~~CG~C~C~~g~~G~~C 220 (280)
T 2p26_A 144 INVPITFQVKVTATECIQEQSFVIRALG-FTDIVTVQVLPQCECRC--RDQSRDRSLCHGKGFLECGICRCDTGYIGKNC 220 (280)
T ss_dssp TTCCEEEEEEEEESSCCCCEEEEEEETT-CCCCEEEEEEECCCCCC--CCSTTCTTGGGGSEEEETTEEEECTTEESTTS
T ss_pred cCCEEEEeeecccccCCCCCCEEEeecC-CcceeEEEECCcEeCcC--cCCCCcCCccCCCCeECCCceeCCCCCcCCcc
Confidence 4556677777777777655322221211 111122222111 1222 122 11288888888888888888888887
Q ss_pred C
Q psy12789 318 S 318 (514)
Q Consensus 318 e 318 (514)
+
T Consensus 221 e 221 (280)
T 2p26_A 221 E 221 (280)
T ss_dssp C
T ss_pred e
Confidence 5
No 75
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.34 E-value=0.0002 Score=55.26 Aligned_cols=35 Identities=26% Similarity=0.753 Sum_probs=30.3
Q ss_pred CCCCCCCCeeec-----cCCceeeecCCCcccCCCCcccc
Q psy12789 388 PNACNRHGTCAF-----ENEEYQCVCAEGWAGVDCNIKLE 422 (514)
Q Consensus 388 ~~~C~~~G~C~~-----~~Gsy~C~C~~Gy~G~~Ce~~~~ 422 (514)
.++|.++|+|++ ..++|.|.|++||+|..|+..++
T Consensus 11 ~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~ 50 (63)
T 1hae_A 11 KTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVP 50 (63)
T ss_dssp HTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECC
T ss_pred CCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcC
Confidence 478999999986 56789999999999999997654
No 76
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.31 E-value=0.00011 Score=53.36 Aligned_cols=31 Identities=29% Similarity=0.758 Sum_probs=26.1
Q ss_pred CCCCCCCeeeccC--CceeeecCCCcccCCCCcc
Q psy12789 389 NACNRHGTCAFEN--EEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 389 ~~C~~~G~C~~~~--Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
++|.+ |+|.... ++|.|.|++||+|..|+..
T Consensus 12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred CCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 68988 8998644 6799999999999999854
No 77
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.24 E-value=0.00028 Score=80.13 Aligned_cols=78 Identities=21% Similarity=0.539 Sum_probs=53.3
Q ss_pred ceeecCCCCCCCCCCCCCCCCCCCCCCCCceeeC----CceecCCCCC---ccccC-CCCCC--CCCCCCCeeeccCCce
Q psy12789 335 GICHCENGWKGPECDIPASDCQYSDCSGHGSCVE----GTCHCQSGWK---GIGCQ-EAGCP--NACNRHGTCAFENEEY 404 (514)
Q Consensus 335 ~~C~C~~G~~G~~Ce~~i~eC~~~~C~~~G~C~~----~~C~C~~Gy~---G~~C~-~~~C~--~~C~~~G~C~~~~Gsy 404 (514)
+.+.|..|+.+..++..+++|......-...|.+ +.|.|++||. |..|+ +++|. ..|+ +.|++..|+|
T Consensus 295 ~~~dC~dgsDe~~~~C~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~--~~C~n~~gsy 372 (791)
T 3m0c_C 295 MARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGY 372 (791)
T ss_dssp SSCCSSSSCSCCCTTBSCCSTTTGGGGCSSEEEECSBSEEEECCTTCEEETTTEEECCCCCSSSSSCT--TTCCBCSSCB
T ss_pred CccccccccCccccccccccccccccCccccccCCCCCcccCCCCCCccCCCCccccCcccCCCCCCC--CeeecCCCCc
Confidence 3456777765443322345554322111237875 3899999995 78896 78995 4564 5899999999
Q ss_pred eeecCCCccc
Q psy12789 405 QCVCAEGWAG 414 (514)
Q Consensus 405 ~C~C~~Gy~G 414 (514)
.|.|.+||.+
T Consensus 373 ~C~C~~Gy~l 382 (791)
T 3m0c_C 373 KCQCEEGFQL 382 (791)
T ss_dssp CCCCCSSEEC
T ss_pred eeecCCCCEe
Confidence 9999999975
No 78
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.22 E-value=0.00013 Score=54.67 Aligned_cols=34 Identities=26% Similarity=0.711 Sum_probs=29.6
Q ss_pred CCCCCCCCeee--ccCCceeeecCCCcccCCCCccc
Q psy12789 388 PNACNRHGTCA--FENEEYQCVCAEGWAGVDCNIKL 421 (514)
Q Consensus 388 ~~~C~~~G~C~--~~~Gsy~C~C~~Gy~G~~Ce~~~ 421 (514)
.++|.++|+|. +..++|.|.|++||+|..|+..+
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~ 46 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRD 46 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEEC
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCC
Confidence 47899999998 66788999999999999998753
No 79
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.15 E-value=0.00011 Score=67.45 Aligned_cols=66 Identities=35% Similarity=0.873 Sum_probs=49.5
Q ss_pred cEEe--CCeE-ecCCCCcCCCCCCCCCCCCCCCCCeecCceeecCCCCCCCCCC-CCCCCCCCCCCCCCc------eeeC
Q psy12789 299 GSCY--LGKC-DCIDGYEGTDCSKSVCPVLCSNHGKYGGGICHCENGWKGPECD-IPASDCQYSDCSGHG------SCVE 368 (514)
Q Consensus 299 G~C~--~g~C-~C~~Gf~G~~Ce~~~C~~~C~~~G~c~~~~C~C~~G~~G~~Ce-~~i~eC~~~~C~~~G------~C~~ 368 (514)
+.|. ++.| .|.++|+|..|+. |.+||.|..+. .+...|..-.|...| .|..
T Consensus 68 ~~C~~~tG~C~~C~~g~~G~~Ce~-------------------C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~ 128 (162)
T 1klo_A 68 GNCNRLTGECLKCIYNTAGFYCDR-------------------CKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNP 128 (162)
T ss_dssp CCBCTTTCCBCCBCTTEETTTTCE-------------------ECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCT
T ss_pred CcccCCCCcccCCCCCCcCCCcCc-------------------CchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCC
Confidence 5675 5899 5999999999973 77888887775 223446656676655 6753
Q ss_pred --CceecCCCCCccccC
Q psy12789 369 --GTCHCQSGWKGIGCQ 383 (514)
Q Consensus 369 --~~C~C~~Gy~G~~C~ 383 (514)
++|.|++||+|..|+
T Consensus 129 ~tG~C~C~~g~~G~~Cd 145 (162)
T 1klo_A 129 VTGQCQCLPHVSGRDCG 145 (162)
T ss_dssp TTCCCCBCTTEESTTCC
T ss_pred CCCEeECCCCCcCCCCC
Confidence 699999999998875
No 80
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.12 E-value=0.0003 Score=48.81 Aligned_cols=33 Identities=30% Similarity=0.878 Sum_probs=28.3
Q ss_pred CCCCCCCCCCCCCceeeC----CceecCCCCCccccC
Q psy12789 351 PASDCQYSDCSGHGSCVE----GTCHCQSGWKGIGCQ 383 (514)
Q Consensus 351 ~i~eC~~~~C~~~G~C~~----~~C~C~~Gy~G~~C~ 383 (514)
++++|...||.++|+|++ +.|.|++||+|..|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 467888889999999985 389999999999886
No 81
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.75 E-value=0.00044 Score=62.50 Aligned_cols=39 Identities=31% Similarity=0.865 Sum_probs=33.1
Q ss_pred cCCCCC-CCCCCCCCeeeccCCceeeecCCCcccCCCCcc
Q psy12789 382 CQEAGC-PNACNRHGTCAFENEEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 382 C~~~~C-~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
|+.+.| +++|.++|+|.+..++|.|.|++||.|..|+..
T Consensus 117 Ce~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 117 CYTASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp EEECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred EEeCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 444556 367988999999999999999999999999865
No 82
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.61 E-value=0.0011 Score=68.94 Aligned_cols=63 Identities=21% Similarity=0.579 Sum_probs=43.7
Q ss_pred CCCC-CCCCCCCeeeccCCceeeecCCCcc---cCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCCCCeEecCCCc-ee
Q psy12789 385 AGCP-NACNRHGTCAFENEEYQCVCAEGWA---GVDCNIKLEMSCNDDTDNDKDGVTDCSD-SDCCSQPVCSDQPHI-MC 458 (514)
Q Consensus 385 ~~C~-~~C~~~G~C~~~~Gsy~C~C~~Gy~---G~~Ce~~~~~~C~d~~~~d~~g~~eC~d-~~C~~~~~C~n~~g~-~C 458 (514)
++|. ++|..++.|.+..++|.|.|++||. |..|+ +++||.. .+|. ..|.++.+. .|
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~----------------dideC~~~~~C~--~~C~n~~g~~~C 62 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE----------------DIDECQDPDTCS--QLCVNLEGGYKC 62 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEE----------------ECCCCSTTSSCS--SCCBCCSSSCBC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCccc----------------CchhhhccCCCC--CccCCCccceee
Confidence 3563 4555567999999999999999998 44443 3567764 3554 378888765 57
Q ss_pred ecCCCCc
Q psy12789 459 LASNDPV 465 (514)
Q Consensus 459 ~~~~~p~ 465 (514)
.|..++.
T Consensus 63 ~C~~g~~ 69 (400)
T 3p5b_L 63 QCEEGFQ 69 (400)
T ss_dssp CCCTTCC
T ss_pred ecccccc
Confidence 7766543
No 83
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=96.57 E-value=0.00073 Score=67.55 Aligned_cols=52 Identities=37% Similarity=0.964 Sum_probs=39.5
Q ss_pred CCCCCeecCceeecCCCCCCCCCCCCCC---------CCCCC----CCCCCceeeCCceecCCCC
Q psy12789 326 CSNHGKYGGGICHCENGWKGPECDIPAS---------DCQYS----DCSGHGSCVEGTCHCQSGW 377 (514)
Q Consensus 326 C~~~G~c~~~~C~C~~G~~G~~Ce~~i~---------eC~~~----~C~~~G~C~~~~C~C~~Gy 377 (514)
|+++|.+..+.|.|.+||.|..|+...+ .|... .|+++|.|+.+.|.|..+|
T Consensus 198 C~g~G~~~CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG~C~C~~~~ 262 (280)
T 2p26_A 198 CHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSD 262 (280)
T ss_dssp GGGSEEEETTEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETTEEEECCCS
T ss_pred cCCCCeECCCceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCCeeECcCCC
Confidence 7778888889999999999999874432 46422 4788888888888887665
No 84
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=96.56 E-value=0.0014 Score=61.42 Aligned_cols=32 Identities=34% Similarity=0.931 Sum_probs=17.4
Q ss_pred CCCCCCCCCCCeeeccCCceeeecCCCcccCCCCc
Q psy12789 385 AGCPNACNRHGTCAFENEEYQCVCAEGWAGVDCNI 419 (514)
Q Consensus 385 ~~C~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~ 419 (514)
..|...|.++|.|+... .|.|++||+|..|+.
T Consensus 149 ~~C~~~C~ngG~Cv~P~---~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 149 AECPGGCRNGGFCNERR---ICECPDGFHGPHCEG 180 (188)
T ss_dssp CCCTTCCCTTCEECTTS---CEECCTTCBTTTTCB
T ss_pred CccCCCCCCCCEeCCCC---cccCcCCCCCCCCcC
Confidence 34455555556665422 566666666666554
No 85
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=96.42 E-value=0.0019 Score=48.00 Aligned_cols=33 Identities=39% Similarity=0.847 Sum_probs=27.5
Q ss_pred CCCCCCC---CCCCCceee--C----CceecCCCCCccccCC
Q psy12789 352 ASDCQYS---DCSGHGSCV--E----GTCHCQSGWKGIGCQE 384 (514)
Q Consensus 352 i~eC~~~---~C~~~G~C~--~----~~C~C~~Gy~G~~C~~ 384 (514)
+++|... ||.++|+|+ + +.|.|++||+|..|+.
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence 5677665 899999998 4 3899999999999975
No 86
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=96.35 E-value=0.0007 Score=75.19 Aligned_cols=43 Identities=35% Similarity=0.889 Sum_probs=21.1
Q ss_pred ecCCCCCccccC-CCCCCCCCCCCCeeeccCCceeeecCCCcccCCCC
Q psy12789 372 HCQSGWKGIGCQ-EAGCPNACNRHGTCAFENEEYQCVCAEGWAGVDCN 418 (514)
Q Consensus 372 ~C~~Gy~G~~C~-~~~C~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce 418 (514)
.|.+||+|+.|. ...|+..|++||.|++. +|.|.+||.|.+|+
T Consensus 521 ~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~G----~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCLDMCSGHGRCVQG----SCVCDEQWGGLYCD 564 (725)
T ss_dssp CTTCCEEEEEEEEESCSSGGGGGSEEEETT----EEEECTTEESTTSC
T ss_pred ccCCCcccccccccCCCCcccCCCcEECCC----CEeeCCCccCCCcC
Confidence 344555555554 24455555555555432 45555555555554
No 87
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.33 E-value=0.0014 Score=50.01 Aligned_cols=31 Identities=32% Similarity=0.746 Sum_probs=26.5
Q ss_pred CCCCCCeeec----cCCceeeecCCCcccCCCCcc
Q psy12789 390 ACNRHGTCAF----ENEEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 390 ~C~~~G~C~~----~~Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
+|.++|+|.. ..+.|.|.|++||+|..|+..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCccc
Confidence 7999999983 345789999999999999864
No 88
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=96.31 E-value=0.0023 Score=60.05 Aligned_cols=34 Identities=35% Similarity=0.983 Sum_probs=27.1
Q ss_pred cccCCCCCCCCCCcEEe-CCeEecCCCCcCCCCCC
Q psy12789 286 GVSSTCPNGCSGHGSCY-LGKCDCIDGYEGTDCSK 319 (514)
Q Consensus 286 ~~~~~Cp~~C~~~G~C~-~g~C~C~~Gf~G~~Ce~ 319 (514)
|....|++.|.++|.|+ .+.|.|++||.|..|+.
T Consensus 146 C~~~~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 146 CQQAECPGGCRNGGFCNERRICECPDGFHGPHCEG 180 (188)
T ss_dssp ECCCCCTTCCCTTCEECTTSCEECCTTCBTTTTCB
T ss_pred ccCCccCCCCCCCCEeCCCCcccCcCCCCCCCCcC
Confidence 34567888888888888 58888888888888874
No 89
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.10 E-value=0.0023 Score=46.39 Aligned_cols=32 Identities=28% Similarity=0.949 Sum_probs=24.9
Q ss_pred CCCCCC---CCCCCCceeeC------CceecCCCCCccccCC
Q psy12789 352 ASDCQY---SDCSGHGSCVE------GTCHCQSGWKGIGCQE 384 (514)
Q Consensus 352 i~eC~~---~~C~~~G~C~~------~~C~C~~Gy~G~~C~~ 384 (514)
+++|.. +||.+ |+|.. +.|.|++||+|..|+.
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 456665 78988 89973 3799999999999875
No 90
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.06 E-value=0.0027 Score=66.88 Aligned_cols=89 Identities=25% Similarity=0.637 Sum_probs=15.5
Q ss_pred eE-ecCCCCcCCCCCCCCC-CCCCCCCCeecCceee-cCCCCCCCCCCCCCCCCCCCCCCCCceeeCC-ceecCCCCCcc
Q psy12789 305 KC-DCIDGYEGTDCSKSVC-PVLCSNHGKYGGGICH-CENGWKGPECDIPASDCQYSDCSGHGSCVEG-TCHCQSGWKGI 380 (514)
Q Consensus 305 ~C-~C~~Gf~G~~Ce~~~C-~~~C~~~G~c~~~~C~-C~~G~~G~~Ce~~i~eC~~~~C~~~G~C~~~-~C~C~~Gy~G~ 380 (514)
.| .|.+||.+..+....+ +.. .+ ..+.|. |.-++.|..|+... .+|.++|+|.+. +|.|++||.|.
T Consensus 325 ~CE~C~pgy~~~P~~~gt~~p~~---~g--~~~~C~pC~Cn~~g~~CD~~t-----~~C~ngg~C~~~~~C~C~~G~~G~ 394 (426)
T 3zyj_B 325 DCGKCKKNYQGRPWSPGSYLPIP---KG--AANACIPSISSIGTNVCDNEL-----LHCQNGGTCHNNVRCLCPAAYTGI 394 (426)
T ss_dssp SSCEECTTCCSSCCCCCBCCSSS---SC--BCCCCCCCCC----------------------------------------
T ss_pred CccccccccccCcccCCcccccC---CC--CCCcccCCCCCCCcCccccCc-----ccCCCCCCcCCCCCCcCCCCCcCC
Confidence 45 5899998876653221 110 01 223443 44445577886433 478888999864 89999999999
Q ss_pred ccCCCCCCCCCCCCCeeeccCCceeeecC
Q psy12789 381 GCQEAGCPNACNRHGTCAFENEEYQCVCA 409 (514)
Q Consensus 381 ~C~~~~C~~~C~~~G~C~~~~Gsy~C~C~ 409 (514)
.|+.. .|.++|+|....| +|.=+
T Consensus 395 ~Ce~c----~C~~~g~C~~~~G--qc~~~ 417 (426)
T 3zyj_B 395 LCEKL----RCEEAGSCGSDSG--QGAPP 417 (426)
T ss_dssp -----------------------------
T ss_pred CCcCC----CCCCCCcccCCCC--ccCCC
Confidence 98863 4666788876655 55433
No 91
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=96.03 E-value=0.0032 Score=56.85 Aligned_cols=39 Identities=36% Similarity=0.932 Sum_probs=32.2
Q ss_pred cCCCCC-CCCCCCCCeeeccCCceeeecCCCcccCCCCcc
Q psy12789 382 CQEAGC-PNACNRHGTCAFENEEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 382 C~~~~C-~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
|+...| ++.|+++|+|....++|.|.|.+||.|..|+..
T Consensus 117 Ce~~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 117 CYTASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp EEECCCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSCBC
T ss_pred EccCCCCCCcCCCCCeecccCCCceeeeCCCccccccccc
Confidence 444445 367999999999999999999999999999864
No 92
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=95.96 E-value=0.0006 Score=50.66 Aligned_cols=27 Identities=26% Similarity=0.715 Sum_probs=18.6
Q ss_pred CCCCCCceeeC--------CceecCCCCCccccCC
Q psy12789 358 SDCSGHGSCVE--------GTCHCQSGWKGIGCQE 384 (514)
Q Consensus 358 ~~C~~~G~C~~--------~~C~C~~Gy~G~~C~~ 384 (514)
.||.++|+|+. +.|.|++||+|..|+.
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred CcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 46777777762 2677888888777763
No 93
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.87 E-value=0.0018 Score=66.73 Aligned_cols=64 Identities=23% Similarity=0.620 Sum_probs=9.7
Q ss_pred CCCCC-CCCCCCCeeeccCCceeeecCCCcc----cCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCCCCeEecCCCc-
Q psy12789 384 EAGCP-NACNRHGTCAFENEEYQCVCAEGWA----GVDCNIKLEMSCNDDTDNDKDGVTDCS-DSDCCSQPVCSDQPHI- 456 (514)
Q Consensus 384 ~~~C~-~~C~~~G~C~~~~Gsy~C~C~~Gy~----G~~Ce~~~~~~C~d~~~~d~~g~~eC~-d~~C~~~~~C~n~~g~- 456 (514)
+++|. ++|...+.|.+..|+|.|.|++||+ |..|+ ++++|. ..+|.. .|.++.+.
T Consensus 3 ~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~----------------d~~eC~~~~~C~~--~C~~~~g~~ 64 (386)
T 3v65_B 3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQ----------------DVNECAEEGYCSQ--GCTNSEGAF 64 (386)
T ss_dssp -----------------------------------------------------------------CCTT--EEC-----C
T ss_pred cCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccC----------------ccceeCCcCcccC--cCCCCCCCC
Confidence 46673 4433335898888999999999998 66663 345775 346653 38887765
Q ss_pred eeecCCCCc
Q psy12789 457 MCLASNDPV 465 (514)
Q Consensus 457 ~C~~~~~p~ 465 (514)
.|.|..++.
T Consensus 65 ~C~C~~g~~ 73 (386)
T 3v65_B 65 QCWCEAGYE 73 (386)
T ss_dssp CEECCTTEE
T ss_pred eEEECCCce
Confidence 577766543
No 94
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=95.83 E-value=0.0053 Score=43.93 Aligned_cols=31 Identities=35% Similarity=0.670 Sum_probs=25.0
Q ss_pred CCCCC---CCCCCceee--C----CceecCCCCCccccCC
Q psy12789 354 DCQYS---DCSGHGSCV--E----GTCHCQSGWKGIGCQE 384 (514)
Q Consensus 354 eC~~~---~C~~~G~C~--~----~~C~C~~Gy~G~~C~~ 384 (514)
+|.+. ||.++|+|+ + +.|.|++||+|..|+.
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 45555 899999997 3 3899999999999974
No 95
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=95.76 E-value=0.0039 Score=67.95 Aligned_cols=37 Identities=32% Similarity=0.861 Sum_probs=32.8
Q ss_pred CCC-CCCCCCCCeeec-cCCceeeecC-CCcccCCCCccc
Q psy12789 385 AGC-PNACNRHGTCAF-ENEEYQCVCA-EGWAGVDCNIKL 421 (514)
Q Consensus 385 ~~C-~~~C~~~G~C~~-~~Gsy~C~C~-~Gy~G~~Ce~~~ 421 (514)
++| +++|.++|+|.+ ..++|.|.|. +||+|..|+...
T Consensus 3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~ 42 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPE 42 (553)
T ss_dssp CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEEC
T ss_pred CcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCCc
Confidence 456 589999999999 8899999999 999999999754
No 96
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.68 E-value=0.0047 Score=54.02 Aligned_cols=56 Identities=23% Similarity=0.529 Sum_probs=36.8
Q ss_pred CCCCCceeeCC-------ceecCCCCCccccCCCCCCCCCCCCCeeeccCCceeeecCCCcccCCCCcc
Q psy12789 359 DCSGHGSCVEG-------TCHCQSGWKGIGCQEAGCPNACNRHGTCAFENEEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 359 ~C~~~G~C~~~-------~C~C~~Gy~G~~C~~~~C~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
||.++|+|++. .|.|++||+|..|+++.. ..|..+ ....|++.+..++.|..|+.-
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~-~~C~~g-----~G~~YrG~~~~t~sG~~Cq~W 64 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-KTCYEG-----NGHFYRGKASTDTMGRPCLPW 64 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS-CCSBCS-----SCTTCCSCCCBBTTSCBBCCT
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc-CCCccc-----ccccceeeccccccCCcccCc
Confidence 57778888642 688888888888876432 123211 123578888888888888753
No 97
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=95.60 E-value=0.002 Score=71.66 Aligned_cols=43 Identities=30% Similarity=0.689 Sum_probs=23.1
Q ss_pred ecCCCCcCCCCC-CCCCCCCCCCCCeecCceeecCCCCCCCCCC
Q psy12789 307 DCIDGYEGTDCS-KSVCPVLCSNHGKYGGGICHCENGWKGPECD 349 (514)
Q Consensus 307 ~C~~Gf~G~~Ce-~~~C~~~C~~~G~c~~~~C~C~~G~~G~~Ce 349 (514)
.|.+||.|.+|. ...|+..|++||.|..+.|.|.+||.|..|.
T Consensus 521 ~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~G~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCLDMCSGHGRCVQGSCVCDEQWGGLYCD 564 (725)
T ss_dssp CTTCCEEEEEEEEESCSSGGGGGSEEEETTEEEECTTEESTTSC
T ss_pred ccCCCcccccccccCCCCcccCCCcEECCCCEeeCCCccCCCcC
Confidence 455555555555 2445555555555555555555555555554
No 98
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=95.53 E-value=0.0027 Score=48.88 Aligned_cols=31 Identities=29% Similarity=0.769 Sum_probs=25.4
Q ss_pred CCCCCCCCCCCceeeC---------CceecCCCCCccccC
Q psy12789 353 SDCQYSDCSGHGSCVE---------GTCHCQSGWKGIGCQ 383 (514)
Q Consensus 353 ~eC~~~~C~~~G~C~~---------~~C~C~~Gy~G~~C~ 383 (514)
++|...||.++|+|++ +.|.|++||+|..|+
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce 46 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC
Confidence 4576778999999973 279999999999997
No 99
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=95.37 E-value=0.0079 Score=65.93 Aligned_cols=36 Identities=31% Similarity=0.905 Sum_probs=31.3
Q ss_pred CCC-CCCCCCCCeeec-cCCceeeecC-CCcccCCCCcc
Q psy12789 385 AGC-PNACNRHGTCAF-ENEEYQCVCA-EGWAGVDCNIK 420 (514)
Q Consensus 385 ~~C-~~~C~~~G~C~~-~~Gsy~C~C~-~Gy~G~~Ce~~ 420 (514)
++| +++|.++|+|.+ ..++|.|.|. +||+|..|+..
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 40 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP 40 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence 567 589999999995 4588999999 99999999975
No 100
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=95.35 E-value=0.0047 Score=55.19 Aligned_cols=39 Identities=33% Similarity=0.958 Sum_probs=32.3
Q ss_pred cCCCCC-CCCCCCCCeeeccCCceeeecCCCcccCCCCcc
Q psy12789 382 CQEAGC-PNACNRHGTCAFENEEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 382 C~~~~C-~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
|+.+.| +++|.++|.|.+..+.|.|.|.+||+|..|++.
T Consensus 117 Ce~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 117 CYTAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp EEECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred eCcCCCCCCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 444555 367888899999999999999999999999864
No 101
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=95.22 E-value=0.0035 Score=48.27 Aligned_cols=34 Identities=24% Similarity=0.785 Sum_probs=28.8
Q ss_pred CCCCCCCCCCCCC--ceeeCC----ceecCCCCC-ccccCC
Q psy12789 351 PASDCQYSDCSGH--GSCVEG----TCHCQSGWK-GIGCQE 384 (514)
Q Consensus 351 ~i~eC~~~~C~~~--G~C~~~----~C~C~~Gy~-G~~C~~ 384 (514)
.+++|.+.||.++ |+|++. .|.|++||+ |..|+.
T Consensus 10 ~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSS
T ss_pred CCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCC
Confidence 4678888899988 899863 899999999 998864
No 102
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.11 E-value=0.021 Score=49.84 Aligned_cols=37 Identities=27% Similarity=0.724 Sum_probs=30.1
Q ss_pred CCCCCCeeeccC--Cce-eeecCCCcccCCCCccccCCCC
Q psy12789 390 ACNRHGTCAFEN--EEY-QCVCAEGWAGVDCNIKLEMSCN 426 (514)
Q Consensus 390 ~C~~~G~C~~~~--Gsy-~C~C~~Gy~G~~Ce~~~~~~C~ 426 (514)
+|.++|+|.+.. .++ .|.|++||+|..|++.....|.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~ 41 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCY 41 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSB
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCc
Confidence 699999998873 445 9999999999999987654453
No 103
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=94.75 E-value=0.055 Score=57.57 Aligned_cols=76 Identities=16% Similarity=0.363 Sum_probs=41.7
Q ss_pred cCCCeeeEEEEEEEEEeecCCe--EEEeE--ecCCcceeEEEEEEecccccc--CCCCCCCC-CCcEEeCCeEecCCCCc
Q psy12789 241 SDQTTETNFVEVQILKFLMSGK--WFLSV--YNDDVKTHEIKLLIKEAEGVS--STCPNGCS-GHGSCYLGKCDCIDGYE 313 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~G~--~~l~~--~nd~~~~~~v~~~~~~~~~~~--~~Cp~~C~-~~G~C~~g~C~C~~Gf~ 313 (514)
.+|...+|.++++...|..... ..+.. +++.+ ...+.+.++ +.|.. ..=+..|+ ++|....|.|.|.+||.
T Consensus 390 ~ig~~v~F~v~v~~~~C~~~~~~~~~i~p~gf~e~l-~v~v~~~C~-C~C~~~~~~~s~~C~~g~G~~~CG~C~C~~G~~ 467 (472)
T 3t3p_B 390 KIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSL-IVQVTFDCD-CACQAQAEPNSHRCNNGNGTFECGVCRCGPGWL 467 (472)
T ss_dssp CTTCEEEEEEEEEECSCCSSSEEEEEEEETTCSCCE-EEEEEECCS-CGGGGGCBTTCTTTTTTTEEEETTEEEECTTC-
T ss_pred ccCCEEEEEEEEEeccCCCCCceeEEEeecCCCceE-EEEEeeccc-CCCCCCCCCCCcccCCCCeeEeCCceECcCCCC
Confidence 4567788888888888874332 22333 22222 234444444 33321 11234687 88888889999999999
Q ss_pred CCCCC
Q psy12789 314 GTDCS 318 (514)
Q Consensus 314 G~~Ce 318 (514)
|..|+
T Consensus 468 G~~Ce 472 (472)
T 3t3p_B 468 GSQCE 472 (472)
T ss_dssp -----
T ss_pred CCCCC
Confidence 88885
No 104
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=94.57 E-value=0.024 Score=41.47 Aligned_cols=25 Identities=24% Similarity=0.539 Sum_probs=21.3
Q ss_pred CCCCCCCeeeccCCceeeecCCCcccC
Q psy12789 389 NACNRHGTCAFENEEYQCVCAEGWAGV 415 (514)
Q Consensus 389 ~~C~~~G~C~~~~Gsy~C~C~~Gy~G~ 415 (514)
.+|. +.|++..|+|.|.|++||.+.
T Consensus 20 ~~C~--~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 20 PQCQ--HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp CTTS--SEEEEETTEEEEECSTTCEEC
T ss_pred CCCC--CEeECCCCCeEEECCCCCeEC
Confidence 3575 489999999999999999863
No 105
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=94.14 E-value=0.013 Score=58.47 Aligned_cols=32 Identities=22% Similarity=0.673 Sum_probs=26.8
Q ss_pred CCCC---CCCCCCCCeeeccCCceeeecCCCcccC
Q psy12789 384 EAGC---PNACNRHGTCAFENEEYQCVCAEGWAGV 415 (514)
Q Consensus 384 ~~~C---~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~ 415 (514)
+++| .+.|..++.|+|..|+|.|.|.+||.|.
T Consensus 5 iDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~Gn 39 (285)
T 1gl4_A 5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYTGN 39 (285)
T ss_dssp --CHHHHGGGSCTTEEEEECSSCEEEEECTTEEEC
T ss_pred chhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCC
Confidence 5678 3689999999999999999999999964
No 106
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=94.03 E-value=0.01 Score=61.57 Aligned_cols=32 Identities=47% Similarity=1.073 Sum_probs=28.3
Q ss_pred cCCCCCCCCCCcEEeCCeEecCCCCcCCC--CCC
Q psy12789 288 SSTCPNGCSGHGSCYLGKCDCIDGYEGTD--CSK 319 (514)
Q Consensus 288 ~~~Cp~~C~~~G~C~~g~C~C~~Gf~G~~--Ce~ 319 (514)
...||+.|++||.|..+.|.|.+||.|.+ |..
T Consensus 191 g~~Cp~~CsGhG~C~~g~C~Cd~G~~g~d~~C~~ 224 (387)
T 2ddu_A 191 SEPCPSYCSGHGDCISGVCFCDLGYTAAQGTCVS 224 (387)
T ss_dssp ESCCGGGGGGSEEEETTEEEECTTEEEETTEEEE
T ss_pred cccCccccCCCceecCCeEEecCCcccCCCcccc
Confidence 45799999999999999999999999975 653
No 107
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=93.94 E-value=0.03 Score=50.45 Aligned_cols=55 Identities=27% Similarity=0.530 Sum_probs=38.9
Q ss_pred CCCCCceeeCC-------ceecCCCCCccccCCCCCCCCCCCCCeeeccC-CceeeecCCCcccCCCCcc
Q psy12789 359 DCSGHGSCVEG-------TCHCQSGWKGIGCQEAGCPNACNRHGTCAFEN-EEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 359 ~C~~~G~C~~~-------~C~C~~Gy~G~~C~~~~C~~~C~~~G~C~~~~-Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
+|.++|+|+.. .|.|++||.|..|+++... .|.... ..|+........|..|+.-
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~-------~C~~g~G~~YrG~~s~T~sG~~Cq~W 76 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSK-------TCYEGNGHFYRGKASTDTMGRPCLPW 76 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSC-------CEECTTCTTCCSCCCBBTTSCBCCCT
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccccc-------cCCCCCccccccceecCCcCCcccCC
Confidence 79999999643 6999999999999865321 243322 3577777777788888654
No 108
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=93.90 E-value=0.02 Score=42.65 Aligned_cols=29 Identities=31% Similarity=0.764 Sum_probs=22.7
Q ss_pred CCCCCCCcEEe--C----CeEecCCCCcCCCCCCC
Q psy12789 292 PNGCSGHGSCY--L----GKCDCIDGYEGTDCSKS 320 (514)
Q Consensus 292 p~~C~~~G~C~--~----g~C~C~~Gf~G~~Ce~~ 320 (514)
++.|.++|+|. . +.|.|++||+|..|+..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 45688889997 2 57999999999888753
No 109
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=93.82 E-value=0.035 Score=43.78 Aligned_cols=25 Identities=20% Similarity=0.417 Sum_probs=14.8
Q ss_pred CCCCCCCeeeccCCceeeec-CCCcc
Q psy12789 389 NACNRHGTCAFENEEYQCVC-AEGWA 413 (514)
Q Consensus 389 ~~C~~~G~C~~~~Gsy~C~C-~~Gy~ 413 (514)
+.|.++++|+|..|+|+|.| ..||.
T Consensus 11 ~~C~~~~~C~Nt~Gsy~C~~~~~g~~ 36 (71)
T 2kl7_A 11 EACKGEMKCINHYGGYLCLPRSAAVI 36 (71)
T ss_dssp CSCTTEEEEEETTCCEEEEETTSCCC
T ss_pred CCCCCCCEeECCCCCeEecccCCccc
Confidence 34665566666666666663 34554
No 110
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=93.28 E-value=0.067 Score=44.98 Aligned_cols=64 Identities=25% Similarity=0.750 Sum_probs=47.6
Q ss_pred CCCCCCCCCceeeCC-----ceecCCCCCcc--ccCC---CCCC---CCCCCCCeeeccC-----CceeeecCCCcc---
Q psy12789 355 CQYSDCSGHGSCVEG-----TCHCQSGWKGI--GCQE---AGCP---NACNRHGTCAFEN-----EEYQCVCAEGWA--- 413 (514)
Q Consensus 355 C~~~~C~~~G~C~~~-----~C~C~~Gy~G~--~C~~---~~C~---~~C~~~G~C~~~~-----Gsy~C~C~~Gy~--- 413 (514)
|....|..++.|... .|+|.+||+|+ .|.. ..|. ..|..++.|.... +-..|.|.+||.
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~~~~ 86 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDSYPL 86 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTCCEE
T ss_pred eccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCcccc
Confidence 555677888889752 89999999854 5754 3674 4599999998764 568999999964
Q ss_pred --cCCCC
Q psy12789 414 --GVDCN 418 (514)
Q Consensus 414 --G~~Ce 418 (514)
|..|+
T Consensus 87 ~~gvf~~ 93 (99)
T 1ob1_C 87 FDGIFCS 93 (99)
T ss_dssp GGGTEEC
T ss_pred eeEEEec
Confidence 55554
No 111
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=93.03 E-value=0.054 Score=39.85 Aligned_cols=31 Identities=32% Similarity=0.878 Sum_probs=24.9
Q ss_pred CCCCCCCeee--ccCCceeeecCCCcccCCCCcc
Q psy12789 389 NACNRHGTCA--FENEEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 389 ~~C~~~G~C~--~~~Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
+.|.+ |+|. ...+.+.|.|++||+|..|+..
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 56877 7896 3446689999999999999864
No 112
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=92.60 E-value=0.072 Score=47.91 Aligned_cols=37 Identities=27% Similarity=0.689 Sum_probs=29.8
Q ss_pred CCCCCCeeecc--CCce-eeecCCCcccCCCCccccCCCC
Q psy12789 390 ACNRHGTCAFE--NEEY-QCVCAEGWAGVDCNIKLEMSCN 426 (514)
Q Consensus 390 ~C~~~G~C~~~--~Gsy-~C~C~~Gy~G~~Ce~~~~~~C~ 426 (514)
+|.++|+|... ...+ +|.|++||.|..|++.....|-
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~~C~ 53 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCY 53 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSCCEE
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccccccCC
Confidence 79999999765 2445 8999999999999987654454
No 113
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=92.48 E-value=0.16 Score=53.05 Aligned_cols=52 Identities=31% Similarity=0.766 Sum_probs=34.4
Q ss_pred CCCCCcE-EeC--------CeEecCCCCcCCCCCCCCCCCCCCCCCeecCceeecCCCCCCCCCC----CCCCCCCCCCC
Q psy12789 294 GCSGHGS-CYL--------GKCDCIDGYEGTDCSKSVCPVLCSNHGKYGGGICHCENGWKGPECD----IPASDCQYSDC 360 (514)
Q Consensus 294 ~C~~~G~-C~~--------g~C~C~~Gf~G~~Ce~~~C~~~C~~~G~c~~~~C~C~~G~~G~~Ce----~~i~eC~~~~C 360 (514)
.|++|+. |.. +.|.|..++.|..|+ .|.+||.|.... ...+.|...+|
T Consensus 267 ~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CE-------------------rC~pGy~g~p~~~at~~~~~~C~pC~C 327 (403)
T 2y38_A 267 VCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCD-------------------RCCPGFNQQPWKPATTDSANECQSCNC 327 (403)
T ss_dssp CCTTBCSCEEESCTTSTTCEEECCCTTEESSSCC-------------------EECTTCCSSCCCCCCSSCCCCCCCCCC
T ss_pred ccCCCccccCCCCCCCccceEeECcCcCcCCCCC-------------------CCCccccCCcccccccCCCcccccccc
Confidence 3888875 861 469999999998886 488999875431 11235655556
Q ss_pred CCCc
Q psy12789 361 SGHG 364 (514)
Q Consensus 361 ~~~G 364 (514)
.+++
T Consensus 328 nghs 331 (403)
T 2y38_A 328 HGHA 331 (403)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 5544
No 114
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=92.09 E-value=0.042 Score=49.29 Aligned_cols=34 Identities=38% Similarity=0.877 Sum_probs=25.4
Q ss_pred CCCCCCCCCCceeeCC----ceecCCCCCccccCC-CCC
Q psy12789 354 DCQYSDCSGHGSCVEG----TCHCQSGWKGIGCQE-AGC 387 (514)
Q Consensus 354 eC~~~~C~~~G~C~~~----~C~C~~Gy~G~~C~~-~~C 387 (514)
+|...+|.++|+|.+. .|.|++||.|..|++ ++|
T Consensus 121 ~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~~~c 159 (162)
T 1g1s_A 121 SCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDD 159 (162)
T ss_dssp CCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEECC-
T ss_pred CCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccCccc
Confidence 4666778888888753 899999999988874 445
No 115
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=92.08 E-value=0.07 Score=39.71 Aligned_cols=22 Identities=32% Similarity=0.847 Sum_probs=19.4
Q ss_pred CCCCCCeeeccCCceeeecCCCcc
Q psy12789 390 ACNRHGTCAFENEEYQCVCAEGWA 413 (514)
Q Consensus 390 ~C~~~G~C~~~~Gsy~C~C~~Gy~ 413 (514)
.|. ..|++..|+|.|.|++||.
T Consensus 10 ~C~--~~C~nt~Gsy~C~C~~Gy~ 31 (55)
T 2jkh_L 10 DCD--QFCHEEQNSVVCSCARGYT 31 (55)
T ss_dssp GCS--SEEEEETTEEEEECCTTEE
T ss_pred CcC--cEeEcCCCCeEEeCCCCCE
Confidence 475 4899999999999999997
No 116
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=92.05 E-value=0.13 Score=37.85 Aligned_cols=30 Identities=30% Similarity=0.687 Sum_probs=23.3
Q ss_pred CCCCCCCeee--ccCCceeeecCCCcccCCCCc
Q psy12789 389 NACNRHGTCA--FENEEYQCVCAEGWAGVDCNI 419 (514)
Q Consensus 389 ~~C~~~G~C~--~~~Gsy~C~C~~Gy~G~~Ce~ 419 (514)
+.|.+ |+|. ...+.+.|.|++||+|..|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 56765 6997 334568899999999999974
No 117
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=91.58 E-value=0.083 Score=39.99 Aligned_cols=26 Identities=27% Similarity=0.818 Sum_probs=21.5
Q ss_pred CCCCCcEEe--C------CeEecCCCCcCCCCCC
Q psy12789 294 GCSGHGSCY--L------GKCDCIDGYEGTDCSK 319 (514)
Q Consensus 294 ~C~~~G~C~--~------g~C~C~~Gf~G~~Ce~ 319 (514)
.|.++|+|. . +.|.|++||+|..|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence 488899997 1 3799999999999974
No 118
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=91.49 E-value=0.094 Score=42.36 Aligned_cols=30 Identities=30% Similarity=0.858 Sum_probs=22.2
Q ss_pred CCCCCCCeeec--cCCceeeecCCCcccCCCCc
Q psy12789 389 NACNRHGTCAF--ENEEYQCVCAEGWAGVDCNI 419 (514)
Q Consensus 389 ~~C~~~G~C~~--~~Gsy~C~C~~Gy~G~~Ce~ 419 (514)
+.|.+ |+|.. ..+.+.|.|.+||+|..|+.
T Consensus 46 ~yCln-G~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 46 DFCIH-GECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TCCSS-EEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CcCCC-CEeeeecCCCCeEEEcCCCcccccccc
Confidence 56766 48843 23567899999999999975
No 119
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=91.13 E-value=0.14 Score=37.72 Aligned_cols=31 Identities=32% Similarity=0.837 Sum_probs=24.4
Q ss_pred CCCCCCCeeecc--CCceeeecCCCcccCCCCcc
Q psy12789 389 NACNRHGTCAFE--NEEYQCVCAEGWAGVDCNIK 420 (514)
Q Consensus 389 ~~C~~~G~C~~~--~Gsy~C~C~~Gy~G~~Ce~~ 420 (514)
+.|.++ +|... .+.+.|.|.+||+|..|+..
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCCCce
Confidence 568764 99753 36689999999999999853
No 120
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=91.00 E-value=0.07 Score=58.08 Aligned_cols=33 Identities=36% Similarity=1.026 Sum_probs=29.1
Q ss_pred CCCCCCCCCCCCceeeC-C----ceecC-CCCCccccCC
Q psy12789 352 ASDCQYSDCSGHGSCVE-G----TCHCQ-SGWKGIGCQE 384 (514)
Q Consensus 352 i~eC~~~~C~~~G~C~~-~----~C~C~-~Gy~G~~C~~ 384 (514)
+++|.+.||.++|+|.+ + .|.|. +||+|..|+.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 56788999999999987 3 89999 9999999963
No 121
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=90.38 E-value=0.16 Score=52.52 Aligned_cols=36 Identities=25% Similarity=0.771 Sum_probs=28.9
Q ss_pred CCC-CCCCCCCCeeeccCCceeeecCC-CcccCCCCcc
Q psy12789 385 AGC-PNACNRHGTCAFENEEYQCVCAE-GWAGVDCNIK 420 (514)
Q Consensus 385 ~~C-~~~C~~~G~C~~~~Gsy~C~C~~-Gy~G~~Ce~~ 420 (514)
+.| +++|.++|+|....++|.|.|+. ||.|..|+..
T Consensus 186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp SCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 345 36788889998888889999985 9999999854
No 122
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=88.30 E-value=0.17 Score=55.40 Aligned_cols=31 Identities=29% Similarity=0.917 Sum_probs=27.5
Q ss_pred CCCCCCCCCCCceeeC-----CceecC-CCCCccccC
Q psy12789 353 SDCQYSDCSGHGSCVE-----GTCHCQ-SGWKGIGCQ 383 (514)
Q Consensus 353 ~eC~~~~C~~~G~C~~-----~~C~C~-~Gy~G~~C~ 383 (514)
++|.+.||.++|+|.+ +.|.|+ +||+|..|+
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence 5788999999999984 389999 999999995
No 123
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=88.01 E-value=0.17 Score=45.26 Aligned_cols=35 Identities=51% Similarity=1.005 Sum_probs=24.2
Q ss_pred CCCCCCCCCceeeC----CceecCCCCCccccCC-CCCCC
Q psy12789 355 CQYSDCSGHGSCVE----GTCHCQSGWKGIGCQE-AGCPN 389 (514)
Q Consensus 355 C~~~~C~~~G~C~~----~~C~C~~Gy~G~~C~~-~~C~~ 389 (514)
|...+|.++|.|.+ +.|.|.+||.|..|+. .+|+.
T Consensus 122 ~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~~~c~~ 161 (164)
T 3cfw_A 122 CQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQFVQVDPR 161 (164)
T ss_dssp CCTTSSCSSEEEEEETTEEEEEECTTCBSSSSCBC-----
T ss_pred CCCCcCCCCCeecccCCCceeeeCCCcccccccccccCcc
Confidence 44567888899984 4899999999999984 46653
No 124
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=87.99 E-value=0.26 Score=52.72 Aligned_cols=76 Identities=24% Similarity=0.345 Sum_probs=19.3
Q ss_pred cCCCeeeEEEEEEEEEeecCC-eEEEeEe--cCCcceeEEEEEEecccccc-CCCCCCCC-CCcEEeCCeEecCCCCcCC
Q psy12789 241 SDQTTETNFVEVQILKFLMSG-KWFLSVY--NDDVKTHEIKLLIKEAEGVS-STCPNGCS-GHGSCYLGKCDCIDGYEGT 315 (514)
Q Consensus 241 ~~~~~~~~~~~~~~~~~l~~G-~~~l~~~--nd~~~~~~v~~~~~~~~~~~-~~Cp~~C~-~~G~C~~g~C~C~~Gf~G~ 315 (514)
.+|.+.+|.++++..+|.... ...+... ++.+. .++.+.++ +.|.. ..=+..|+ ++|....|.|.|.+||.|.
T Consensus 413 ~ig~~v~F~v~v~~~~C~~~~~~~~i~p~Gf~e~l~-V~v~~~C~-C~C~~~~~~s~~C~~g~G~~~CG~C~C~~G~~G~ 490 (503)
T 3v4v_B 413 RINQTVTFWVSLQATHCLPEPHLLRLRALGFSEELI-VELHTLCD-CNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLGR 490 (503)
T ss_dssp CTTCEEEEEEEEEECSCCSSCCEEEEEEETSSCEEE-EECCCC-------------------------------------
T ss_pred ccCCEEEEEEEEEeecCCCCCcEEEEccCCCCceEE-EEEecccC-CCCCCCCCCCcccCCCCeeEeCCceECcCCCcCC
Confidence 466778888888888886432 2233332 22111 12222222 11111 01112454 5666666666666666666
Q ss_pred CCC
Q psy12789 316 DCS 318 (514)
Q Consensus 316 ~Ce 318 (514)
.|+
T Consensus 491 ~Ce 493 (503)
T 3v4v_B 491 LCE 493 (503)
T ss_dssp ---
T ss_pred CCC
Confidence 664
No 125
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=86.59 E-value=0.2 Score=36.71 Aligned_cols=18 Identities=39% Similarity=0.898 Sum_probs=16.7
Q ss_pred eeeccCCceeeecCCCcc
Q psy12789 396 TCAFENEEYQCVCAEGWA 413 (514)
Q Consensus 396 ~C~~~~Gsy~C~C~~Gy~ 413 (514)
.|++..|+|+|.|++||.
T Consensus 11 ~C~n~~gs~~C~C~~Gy~ 28 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYV 28 (51)
T ss_dssp CCCEETTEECCCCCTTEE
T ss_pred EeEcCCCCeEEeCCCCcE
Confidence 689999999999999997
No 126
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=86.42 E-value=0.78 Score=38.82 Aligned_cols=65 Identities=23% Similarity=0.680 Sum_probs=46.1
Q ss_pred CCCCCCCCCCceeeCC-----ceecCCCCCcc--ccCC-CC-CC---CCCCCCCeeeccC-CceeeecCCCcc-----cC
Q psy12789 354 DCQYSDCSGHGSCVEG-----TCHCQSGWKGI--GCQE-AG-CP---NACNRHGTCAFEN-EEYQCVCAEGWA-----GV 415 (514)
Q Consensus 354 eC~~~~C~~~G~C~~~-----~C~C~~Gy~G~--~C~~-~~-C~---~~C~~~G~C~~~~-Gsy~C~C~~Gy~-----G~ 415 (514)
.|....|..++.|... .|+|..||+|+ .|.. +. |. ..|..++.|.... .--.|.|.+||. |.
T Consensus 12 ~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~Gv 91 (105)
T 1n1i_A 12 KCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEGV 91 (105)
T ss_dssp SCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGGT
T ss_pred EecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccceE
Confidence 3555567788888752 79999999854 5642 33 53 3588899998774 667899998853 65
Q ss_pred CCC
Q psy12789 416 DCN 418 (514)
Q Consensus 416 ~Ce 418 (514)
.|.
T Consensus 92 fC~ 94 (105)
T 1n1i_A 92 FCS 94 (105)
T ss_dssp EEC
T ss_pred EEC
Confidence 554
No 127
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=84.93 E-value=0.19 Score=52.07 Aligned_cols=21 Identities=48% Similarity=1.347 Sum_probs=11.7
Q ss_pred CCCCCceeeCCceecCCCCCc
Q psy12789 359 DCSGHGSCVEGTCHCQSGWKG 379 (514)
Q Consensus 359 ~C~~~G~C~~~~C~C~~Gy~G 379 (514)
.|.+||.|.++.|.|.+||.|
T Consensus 197 ~CsGhG~C~~g~C~Cd~G~~g 217 (387)
T 2ddu_A 197 YCSGHGDCISGVCFCDLGYTA 217 (387)
T ss_dssp GGGGSEEEETTEEEECTTEEE
T ss_pred ccCCCceecCCeEEecCCccc
Confidence 455555555555555555554
No 128
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=83.98 E-value=0.59 Score=36.48 Aligned_cols=19 Identities=26% Similarity=0.711 Sum_probs=16.9
Q ss_pred CeeeccCC-ceeeecCCCcc
Q psy12789 395 GTCAFENE-EYQCVCAEGWA 413 (514)
Q Consensus 395 G~C~~~~G-sy~C~C~~Gy~ 413 (514)
..|.+..| +|.|.|++||.
T Consensus 17 h~C~n~~g~s~~C~C~~Gy~ 36 (69)
T 1kli_L 17 QYCSDHTGTKRSCRCHEGYS 36 (69)
T ss_dssp SEEEEETTTEEEEECCTTEE
T ss_pred CEeEcCCCCCEEEeCCCCCe
Confidence 37999988 89999999996
No 129
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=83.60 E-value=0.63 Score=55.26 Aligned_cols=36 Identities=25% Similarity=0.789 Sum_probs=31.2
Q ss_pred CCC-CCCCCCCCeeeccCCceeeecC-CCcccCCCCcc
Q psy12789 385 AGC-PNACNRHGTCAFENEEYQCVCA-EGWAGVDCNIK 420 (514)
Q Consensus 385 ~~C-~~~C~~~G~C~~~~Gsy~C~C~-~Gy~G~~Ce~~ 420 (514)
+.| +++|.++|+|....++|.|.|+ +||.|..|+..
T Consensus 1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp CCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred CceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence 356 4789999999998889999999 69999999864
No 130
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=83.39 E-value=0.4 Score=43.32 Aligned_cols=21 Identities=24% Similarity=0.841 Sum_probs=18.5
Q ss_pred CCCCCeeeccCCceeeecCCCcc
Q psy12789 391 CNRHGTCAFENEEYQCVCAEGWA 413 (514)
Q Consensus 391 C~~~G~C~~~~Gsy~C~C~~Gy~ 413 (514)
|.. .|.+..|+|.|.|.+||.
T Consensus 137 C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 137 CDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp SSS--EEEEETTEEEEECCTTEE
T ss_pred cCC--ccccCCCCEEEeCCCCcE
Confidence 653 699999999999999998
No 131
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=82.82 E-value=0.87 Score=33.38 Aligned_cols=26 Identities=38% Similarity=0.910 Sum_probs=17.1
Q ss_pred CCCCCCcEEe------CCeEecCCCCcCCCCCC
Q psy12789 293 NGCSGHGSCY------LGKCDCIDGYEGTDCSK 319 (514)
Q Consensus 293 ~~C~~~G~C~------~g~C~C~~Gf~G~~Ce~ 319 (514)
+-|. ||+|. ...|.|+.||+|..|+.
T Consensus 18 ~yC~-nG~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCI-HGECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCS-SSEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCC-CCEEEEecCCCCeeEECCCCcccccccc
Confidence 3455 46776 24688888888877763
No 132
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=81.40 E-value=0.34 Score=42.80 Aligned_cols=31 Identities=48% Similarity=1.323 Sum_probs=25.4
Q ss_pred CCCCCCCCCCceeeCC----ceecCCCCCccccCC
Q psy12789 354 DCQYSDCSGHGSCVEG----TCHCQSGWKGIGCQE 384 (514)
Q Consensus 354 eC~~~~C~~~G~C~~~----~C~C~~Gy~G~~C~~ 384 (514)
.|...||.++|.|.++ .|.|.+||.|..|++
T Consensus 121 ~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 121 ACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp CCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCCCCCEeecCCCCeeEECCCCccCccccc
Confidence 4556788888999863 899999999999975
No 133
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=81.12 E-value=1.1 Score=33.85 Aligned_cols=19 Identities=26% Similarity=0.711 Sum_probs=16.6
Q ss_pred CeeeccC-CceeeecCCCcc
Q psy12789 395 GTCAFEN-EEYQCVCAEGWA 413 (514)
Q Consensus 395 G~C~~~~-Gsy~C~C~~Gy~ 413 (514)
..|.+.. |+|.|.|++||.
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~ 30 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYR 30 (59)
T ss_dssp SEEEECSTTCEEEECCTTEE
T ss_pred CEeEeCCCCCEEeeCCCCcE
Confidence 3689988 699999999996
No 134
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=81.04 E-value=0.68 Score=34.05 Aligned_cols=18 Identities=28% Similarity=0.768 Sum_probs=16.4
Q ss_pred eeeccCC-ceeeecCCCcc
Q psy12789 396 TCAFENE-EYQCVCAEGWA 413 (514)
Q Consensus 396 ~C~~~~G-sy~C~C~~Gy~ 413 (514)
.|++..| +|.|.|++||.
T Consensus 12 ~C~n~~ggs~~C~C~~Gy~ 30 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHEGYS 30 (53)
T ss_dssp EEEEETTTEEEEECCTTEE
T ss_pred EeEcCCCCCEEeeCCCCCE
Confidence 6899888 79999999997
No 135
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=80.78 E-value=0.88 Score=33.39 Aligned_cols=16 Identities=38% Similarity=1.001 Sum_probs=10.6
Q ss_pred CeEecCCCCcCCCCCC
Q psy12789 304 GKCDCIDGYEGTDCSK 319 (514)
Q Consensus 304 g~C~C~~Gf~G~~Ce~ 319 (514)
..|.|.+||+|..|+.
T Consensus 30 ~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 30 PACVCHSGYVGARCEH 45 (50)
T ss_pred eEEECCCCCcccCCCc
Confidence 4677777777777653
No 136
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=80.49 E-value=0.83 Score=54.24 Aligned_cols=36 Identities=31% Similarity=0.836 Sum_probs=31.8
Q ss_pred CCC-CCCCCCCCeeeccCCceeeecC-CCcccCCCCcc
Q psy12789 385 AGC-PNACNRHGTCAFENEEYQCVCA-EGWAGVDCNIK 420 (514)
Q Consensus 385 ~~C-~~~C~~~G~C~~~~Gsy~C~C~-~Gy~G~~Ce~~ 420 (514)
+.| +++|.++|+|....++|.|.|+ +||.|..|+..
T Consensus 620 ~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~~~ 657 (1245)
T 3qcw_A 620 KPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCERE 657 (1245)
T ss_dssp CGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSCEE
T ss_pred CCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCccc
Confidence 456 5899999999998889999999 79999999863
No 137
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=80.47 E-value=0.59 Score=34.23 Aligned_cols=26 Identities=35% Similarity=0.911 Sum_probs=18.3
Q ss_pred CCCCCCcEEe------CCeEecCCCCcCCCCCC
Q psy12789 293 NGCSGHGSCY------LGKCDCIDGYEGTDCSK 319 (514)
Q Consensus 293 ~~C~~~G~C~------~g~C~C~~Gf~G~~Ce~ 319 (514)
+-|.+ |.|. ...|.|++||+|..|+.
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 34665 7885 24688888888888864
No 138
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=78.84 E-value=0.98 Score=46.56 Aligned_cols=33 Identities=30% Similarity=0.889 Sum_probs=26.4
Q ss_pred CCCCCCCCCCCCceeeC----CceecCC-CCCccccCC
Q psy12789 352 ASDCQYSDCSGHGSCVE----GTCHCQS-GWKGIGCQE 384 (514)
Q Consensus 352 i~eC~~~~C~~~G~C~~----~~C~C~~-Gy~G~~C~~ 384 (514)
.+.|...||.++|+|.. +.|.|+. ||.|..|+.
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence 45677888999999985 3899985 999988874
No 139
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=74.97 E-value=1.5 Score=35.25 Aligned_cols=26 Identities=35% Similarity=0.850 Sum_probs=18.2
Q ss_pred CCCCCCcEEe------CCeEecCCCCcCCCCCC
Q psy12789 293 NGCSGHGSCY------LGKCDCIDGYEGTDCSK 319 (514)
Q Consensus 293 ~~C~~~G~C~------~g~C~C~~Gf~G~~Ce~ 319 (514)
+.|.+ |.|. ...|.|.+||+|..|+.
T Consensus 46 ~yCln-G~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 46 DFCIH-GECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TCCSS-EEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CcCCC-CEeeeecCCCCeEEEcCCCcccccccc
Confidence 45654 5884 25788888888888863
No 140
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=74.43 E-value=1.2 Score=47.84 Aligned_cols=60 Identities=28% Similarity=0.686 Sum_probs=36.5
Q ss_pred CCCCCceeeCCceecCCCCCccccCCCCCCCCCCCCCeeeccCCceeeecCCCcccCCCCccc
Q psy12789 359 DCSGHGSCVEGTCHCQSGWKGIGCQEAGCPNACNRHGTCAFENEEYQCVCAEGWAGVDCNIKL 421 (514)
Q Consensus 359 ~C~~~G~C~~~~C~C~~Gy~G~~C~~~~C~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~~Ce~~~ 421 (514)
.|..+-.|++.+|+=..-+.-..|.....+..|+++|.|.+.. .|.|.+||.+++|+...
T Consensus 424 ~CG~~~vC~n~~C~~~~~~~~~~C~~~~~~~~C~~~GVCNn~~---~CHC~~GwaPP~C~~~~ 483 (510)
T 3g5c_A 424 PCGPQMMCLEHRCLPVASFNFSTCLSSKEGTICSGNGVCSNEL---KCVCNRHWIGSDCNTYF 483 (510)
T ss_dssp EEETTEEESSSCEEEGGGGCCCCCCCSSTTCSGGGTEEEBTTS---CEEECTTEESTTSCEEC
T ss_pred ccCCCCeEeCCcccccccccccCCCCcccccccCCCCeeCCCC---CcCCCCCCCCCCCCCCC
Confidence 3544555555555422111111232211124699999998764 79999999999999753
No 141
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=74.04 E-value=1.6 Score=38.54 Aligned_cols=20 Identities=20% Similarity=0.331 Sum_probs=16.8
Q ss_pred CeeeccCCceeeecCCCccc
Q psy12789 395 GTCAFENEEYQCVCAEGWAG 414 (514)
Q Consensus 395 G~C~~~~Gsy~C~C~~Gy~G 414 (514)
+.|.+..|+|.|.|.+||..
T Consensus 130 ~~C~n~~g~~~C~C~~Gy~l 149 (159)
T 1nzi_A 130 HFCNNFIGGYFCSCPPEYFL 149 (159)
T ss_dssp SEEEEETTEEEEECCTTCEE
T ss_pred CcccCcCCCEEEecCCCcEE
Confidence 36888888999999999983
No 142
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=65.61 E-value=3 Score=29.87 Aligned_cols=28 Identities=21% Similarity=0.651 Sum_probs=20.0
Q ss_pred CCCCCCC----------CCCCCCceeeC----CceecCCCCCcc
Q psy12789 351 PASDCQY----------SDCSGHGSCVE----GTCHCQSGWKGI 380 (514)
Q Consensus 351 ~i~eC~~----------~~C~~~G~C~~----~~C~C~~Gy~G~ 380 (514)
++++|.. .+|. +.|++ +.|.|++||.+.
T Consensus 3 DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEEC
T ss_pred ccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeEC
Confidence 5667754 4675 48986 389999999753
No 143
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=64.94 E-value=3 Score=44.98 Aligned_cols=21 Identities=38% Similarity=0.931 Sum_probs=17.5
Q ss_pred CCCCCcEEe--CCeEecCCCCcC
Q psy12789 294 GCSGHGSCY--LGKCDCIDGYEG 314 (514)
Q Consensus 294 ~C~~~G~C~--~g~C~C~~Gf~G 314 (514)
.|+..|.+. .|.|.|.+||.+
T Consensus 251 ~C~~dG~w~~p~G~C~C~~G~e~ 273 (536)
T 3fl7_A 251 HCAVDGEWLVPIGQCLCQAGYEK 273 (536)
T ss_dssp EECTTSCBCCCBCCCEECTTEEE
T ss_pred EEcCCCCEecccCcEeccCcccc
Confidence 488888886 599999999973
No 144
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=64.59 E-value=1.2 Score=44.18 Aligned_cols=34 Identities=26% Similarity=0.775 Sum_probs=23.1
Q ss_pred CCCCCCC--CCCCCCCceeeCC----ceecCCCCCc--cccC
Q psy12789 350 IPASDCQ--YSDCSGHGSCVEG----TCHCQSGWKG--IGCQ 383 (514)
Q Consensus 350 ~~i~eC~--~~~C~~~G~C~~~----~C~C~~Gy~G--~~C~ 383 (514)
.++++|. ..+|..++.|++. .|.|++||.| ..|.
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~ 44 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV 44 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC
Confidence 3577885 4579888999873 8999999984 4564
No 145
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=63.48 E-value=12 Score=31.27 Aligned_cols=64 Identities=17% Similarity=0.511 Sum_probs=42.5
Q ss_pred CCCCCCCeeec-cCCceeeecCCCcccCC--CCccccCCCCCCCCCCCCCCCCCCC--CCCCCCCeEecCC------Cce
Q psy12789 389 NACNRHGTCAF-ENEEYQCVCAEGWAGVD--CNIKLEMSCNDDTDNDKDGVTDCSD--SDCCSQPVCSDQP------HIM 457 (514)
Q Consensus 389 ~~C~~~G~C~~-~~Gsy~C~C~~Gy~G~~--Ce~~~~~~C~d~~~~d~~g~~eC~d--~~C~~~~~C~n~~------g~~ 457 (514)
..|..++.|.. .+|...|+|.+||.|.. |..... ..|.. +-|..++.|.... ...
T Consensus 10 ~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~--------------~sC~~nNGGCd~nA~C~~~~~~~~~~ki~ 75 (99)
T 1ob1_C 10 KQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPN--------------PTCNENNGGCDADAKCTEEDSGSNGKKIT 75 (99)
T ss_dssp CCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSC--------------CCSTTGGGGCCTTEEEECCSCSSSSCCCE
T ss_pred CCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCC--------------CChhhcCCCcCCCceeEecCCcccCCceE
Confidence 56778899977 46888999999999753 321111 24543 3588888888764 356
Q ss_pred eecCCCCce
Q psy12789 458 CLASNDPVE 466 (514)
Q Consensus 458 C~~~~~p~~ 466 (514)
|.+..+...
T Consensus 76 C~C~~g~~~ 84 (99)
T 1ob1_C 76 CECTKPDSY 84 (99)
T ss_dssp EEECSTTCC
T ss_pred eEeCCCCcc
Confidence 777665443
No 146
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=58.60 E-value=14 Score=31.23 Aligned_cols=61 Identities=15% Similarity=0.451 Sum_probs=41.3
Q ss_pred CCCCCCeeec-cCCceeeecCCCcccC--CCCccccCCCCCCCCCCCCCCCCCC--CCCCCCCCeEecCC--CceeecCC
Q psy12789 390 ACNRHGTCAF-ENEEYQCVCAEGWAGV--DCNIKLEMSCNDDTDNDKDGVTDCS--DSDCCSQPVCSDQP--HIMCLASN 462 (514)
Q Consensus 390 ~C~~~G~C~~-~~Gsy~C~C~~Gy~G~--~Ce~~~~~~C~d~~~~d~~g~~eC~--d~~C~~~~~C~n~~--g~~C~~~~ 462 (514)
.|..++.|.. .+|...|+|..||.|. .|-.. .. .|. .+-|..++.|..+. ...|.+..
T Consensus 17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~-Np--------------~C~~nNGGCd~nAeC~~~~~~ki~C~C~~ 81 (105)
T 1n1i_A 17 NVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA-SI--------------TCEENNGGCAPEAECTMDDKKEVECKCTK 81 (105)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC-CC--------------CTTSGGGGSCTTSEEEECTTSCEEEECCS
T ss_pred CCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC-Cc--------------chhhcCCCcCCCcEeEECCCCEEEeECCC
Confidence 4778889987 6788899999999874 23211 21 143 23588888998764 45788766
Q ss_pred CCc
Q psy12789 463 DPV 465 (514)
Q Consensus 463 ~p~ 465 (514)
...
T Consensus 82 ~~~ 84 (105)
T 1n1i_A 82 EGS 84 (105)
T ss_dssp TTC
T ss_pred CCC
Confidence 543
No 147
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=56.63 E-value=4.6 Score=43.37 Aligned_cols=25 Identities=32% Similarity=0.958 Sum_probs=12.4
Q ss_pred CCCCCCeec-CceeecCCCCCCCCCC
Q psy12789 325 LCSNHGKYG-GGICHCENGWKGPECD 349 (514)
Q Consensus 325 ~C~~~G~c~-~~~C~C~~G~~G~~Ce 349 (514)
.|..+|.|+ ...|.|.+||..+.|+
T Consensus 455 ~C~~~GVCNn~~~CHC~~GwaPP~C~ 480 (510)
T 3g5c_A 455 ICSGNGVCSNELKCVCNRHWIGSDCN 480 (510)
T ss_dssp SGGGTEEEBTTSCEEECTTEESTTSC
T ss_pred ccCCCCeeCCCCCcCCCCCCCCCCCC
Confidence 345555553 3345555555555554
No 148
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=56.17 E-value=4 Score=44.01 Aligned_cols=68 Identities=26% Similarity=0.655 Sum_probs=35.4
Q ss_pred CCCCCCee--cCceeecCCCCCCCCCCCCCCCCCCCCCCCCceeeCCceecCCCCCccccCCCCCCCCCCCCCeeeccCC
Q psy12789 325 LCSNHGKY--GGGICHCENGWKGPECDIPASDCQYSDCSGHGSCVEGTCHCQSGWKGIGCQEAGCPNACNRHGTCAFENE 402 (514)
Q Consensus 325 ~C~~~G~c--~~~~C~C~~G~~G~~Ce~~i~eC~~~~C~~~G~C~~~~C~C~~Gy~G~~C~~~~C~~~C~~~G~C~~~~G 402 (514)
.|...|.+ -.+.|.|.+||.+... .|. .|++||.........| .+|..+.. ....|
T Consensus 251 ~C~~dG~w~~p~G~C~C~~G~e~~~~----------------~C~----aC~~g~~k~~~~~~~C-~~CP~~S~-s~~~G 308 (536)
T 3fl7_A 251 HCAVDGEWLVPIGQCLCQAGYEKVED----------------ACQ----ACSPGFFKFEASESPC-LECPEHTL-PSPEG 308 (536)
T ss_dssp EECTTSCBCCCBCCCEECTTEEEETT----------------EEE----ECCTTEECCSCCSSCC-EECCSSEE-CCCTT
T ss_pred EEcCCCCEecccCcEeccCccccCCc----------------eee----ecCCCCCcccCCCCcc-ccCCCCCC-CCCCC
Confidence 46666655 3467888887752111 111 2555544333222223 12333222 23458
Q ss_pred ceeeecCCCccc
Q psy12789 403 EYQCVCAEGWAG 414 (514)
Q Consensus 403 sy~C~C~~Gy~G 414 (514)
.+.|.|..||.-
T Consensus 309 s~~C~C~ng~~r 320 (536)
T 3fl7_A 309 ATSCECEEGFFR 320 (536)
T ss_dssp CSSCEECTTCBC
T ss_pred ccEEEEeccccc
Confidence 899999999863
No 149
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=52.50 E-value=12 Score=38.40 Aligned_cols=20 Identities=5% Similarity=-0.059 Sum_probs=11.7
Q ss_pred cCccccCCCcCccceeeeeeCCccc
Q psy12789 185 YGRRNVAPSITNYDFSEFIKGGKIN 209 (514)
Q Consensus 185 ~g~~~~~~~~~~~~~~~~i~~g~~~ 209 (514)
+|++|+ +|++++......++
T Consensus 137 ~G~tw~-----p~qyfa~~C~~~f~ 156 (375)
T 4aqt_A 137 EDGPWI-----PYQYYSGSCENTYS 156 (375)
T ss_dssp SSSCCE-----EEEEEETTHHHHHS
T ss_pred CCCCcc-----ceeeeecchhHhcC
Confidence 566776 67766655444343
No 150
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=50.90 E-value=19 Score=29.69 Aligned_cols=58 Identities=19% Similarity=0.528 Sum_probs=43.4
Q ss_pred CCCCCCCCCceeeCC-----ceecCCCCC--ccccCC---CCCC---CCCCCCCeeeccC-CceeeecCCCc
Q psy12789 355 CQYSDCSGHGSCVEG-----TCHCQSGWK--GIGCQE---AGCP---NACNRHGTCAFEN-EEYQCVCAEGW 412 (514)
Q Consensus 355 C~~~~C~~~G~C~~~-----~C~C~~Gy~--G~~C~~---~~C~---~~C~~~G~C~~~~-Gsy~C~C~~Gy 412 (514)
|....|..++.|... .|+|..||+ |..|.. ..|. +.|..++.|.... .--.|.|...+
T Consensus 7 C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~ 78 (95)
T 1b9w_A 7 CIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEG 78 (95)
T ss_dssp CSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred cccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCC
Confidence 555667788888752 799999997 666753 3574 4699999998776 56789998774
No 151
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=50.59 E-value=5.9 Score=30.77 Aligned_cols=56 Identities=16% Similarity=0.348 Sum_probs=32.1
Q ss_pred CCCCCCC--CCCCCCceeeCC----cee-cCCCCCccccCCCCCCCCCCCCCeeeccCCceeeecCCCcccC
Q psy12789 351 PASDCQY--SDCSGHGSCVEG----TCH-CQSGWKGIGCQEAGCPNACNRHGTCAFENEEYQCVCAEGWAGV 415 (514)
Q Consensus 351 ~i~eC~~--~~C~~~G~C~~~----~C~-C~~Gy~G~~C~~~~C~~~C~~~G~C~~~~Gsy~C~C~~Gy~G~ 415 (514)
++++|.. .+|..+++|++. .|. |..||.+.. ....+...+. .+ ...+.|.+||.+.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~-~~~~~~~~~~-~~-------~~~~~C~~Gy~~~ 64 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDL-HGEGPPPPVP-PA-------QHPNPCPPGYEPD 64 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCC-SCSSCCCSSC-SC-------SSCCCSCTTEEEE
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccc-cCCccccccc-cC-------ccccCCCCCeeeC
Confidence 5678854 468888899863 786 446776432 1122222221 11 1246799999864
No 152
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=49.66 E-value=2.6 Score=37.90 Aligned_cols=13 Identities=23% Similarity=0.521 Sum_probs=8.9
Q ss_pred ccceeEEEeeCcc
Q psy12789 152 TNYDFSEFIKDNT 164 (514)
Q Consensus 152 tqydf~Ell~G~~ 164 (514)
=.||+||+.||..
T Consensus 57 C~~D~l~i~dg~~ 69 (170)
T 1szb_A 57 CEYDFVKLSSGAK 69 (170)
T ss_dssp SCSSEEEEESSSS
T ss_pred CCCCEEEEEeCCc
Confidence 3578888777753
No 153
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=49.33 E-value=6.1 Score=39.45 Aligned_cols=23 Identities=26% Similarity=0.822 Sum_probs=15.9
Q ss_pred CCCCCCCeeeccCCceeeecCCCcc
Q psy12789 389 NACNRHGTCAFENEEYQCVCAEGWA 413 (514)
Q Consensus 389 ~~C~~~G~C~~~~Gsy~C~C~~Gy~ 413 (514)
..|+ ..|.+..|+|.|.|.+||.
T Consensus 8 ~~C~--~~C~n~~g~~~C~C~~g~~ 30 (349)
T 3v64_C 8 GYCS--QGCTNSEGAFQCWCEAGYE 30 (349)
T ss_dssp -CCS--SEECCC---CCEECCTTEE
T ss_pred CCCc--CeeecCCCCeEEECCCCcc
Confidence 3465 3789999999999999996
No 154
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=46.13 E-value=14 Score=40.36 Aligned_cols=30 Identities=20% Similarity=0.456 Sum_probs=19.1
Q ss_pred CCCCCcEEeCCeEecCCCCcCCCCCCCCCCCCC
Q psy12789 294 GCSGHGSCYLGKCDCIDGYEGTDCSKSVCPVLC 326 (514)
Q Consensus 294 ~C~~~G~C~~g~C~C~~Gf~G~~Ce~~~C~~~C 326 (514)
.|.+++.|..-.|.|..+|.+..+ .|+..|
T Consensus 53 ~c~~~~~~~~c~~~C~~~~~~~~~---~c~~~c 82 (680)
T 1zlg_A 53 WCQNHKQCSKCLEPCKESGDLRKH---QCQSFC 82 (680)
T ss_pred cCCCccccccccCcccccccCchh---hchhhh
Confidence 477778777655678777765543 444444
No 155
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=44.73 E-value=8.7 Score=40.78 Aligned_cols=26 Identities=35% Similarity=1.178 Sum_probs=15.4
Q ss_pred CCCC-CCCeecCceeecCCCCCCCCCC
Q psy12789 324 VLCS-NHGKYGGGICHCENGWKGPECD 349 (514)
Q Consensus 324 ~~C~-~~G~c~~~~C~C~~G~~G~~Ce 349 (514)
..|. ++|....|.|.|.+||.|+.|+
T Consensus 446 ~~C~~g~G~~~CG~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 446 HRCNNGNGTFECGVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTTTTTTEEEETTEEEECTTC------
T ss_pred cccCCCCeeEeCCceECcCCCCCCCCC
Confidence 4576 6777778888888888888774
No 156
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=37.41 E-value=17 Score=39.12 Aligned_cols=27 Identities=44% Similarity=1.137 Sum_probs=20.0
Q ss_pred CCCCCCCeeecc-CCceeeecCCCcccC
Q psy12789 389 NACNRHGTCAFE-NEEYQCVCAEGWAGV 415 (514)
Q Consensus 389 ~~C~~~G~C~~~-~Gsy~C~C~~Gy~G~ 415 (514)
++|..++.|+.. .+.|.|.|+.||.|.
T Consensus 27 ~~c~~~a~C~~~~~~~~~c~C~~G~ag~ 54 (551)
T 3fby_A 27 SECHEHADCVLERDGSRSCVCAVGWAGN 54 (551)
T ss_dssp CCCCTTEEEEECTTSCEEEEECTTEESS
T ss_pred CCCCCCCeeEeCCCCCEecCCCCCCCCC
Confidence 578888888765 456788888888763
No 157
>1cmr_A Charybdotoxin, alpha chimera; antagonist of nicotinic acetylcholine receptor, curaremimetic protein; NMR {Synthetic} SCOP: g.3.7.2
Probab=37.14 E-value=17 Score=23.90 Aligned_cols=20 Identities=30% Similarity=0.708 Sum_probs=14.6
Q ss_pred CCCCCC-----CCCcEEeCCeEecC
Q psy12789 290 TCPNGC-----SGHGSCYLGKCDCI 309 (514)
Q Consensus 290 ~Cp~~C-----~~~G~C~~g~C~C~ 309 (514)
+|-..| ..+|.|.++.|.|.
T Consensus 6 ~C~~~Ck~~~g~~~gKC~NgkC~Cy 30 (31)
T 1cmr_A 6 ECWSVCQRLHNTSKGWCDHRGCICE 30 (31)
T ss_dssp GSSSSSTTTSSCCCCCEETTEECCC
T ss_pred HHHHHHHHHhCCCCCceeCCCceeC
Confidence 455555 46789999999885
No 158
>1jlz_A Tityustoxin alpha-KTX; scorpion venom, K+-channel blocker, structure; NMR {Synthetic} SCOP: g.3.7.2
Probab=35.90 E-value=7.5 Score=24.60 Aligned_cols=18 Identities=39% Similarity=1.198 Sum_probs=14.0
Q ss_pred CCCCCCcEEeCCeEecCC
Q psy12789 293 NGCSGHGSCYLGKCDCID 310 (514)
Q Consensus 293 ~~C~~~G~C~~g~C~C~~ 310 (514)
..|..+|.|.++.|.|.+
T Consensus 7 ~~C~~~gKCmNgkC~Cy~ 24 (26)
T 1jlz_A 7 KKCKGSGKCINGRCKCYX 24 (26)
T ss_dssp HHTTSSEEEETTEEEEC-
T ss_pred hhhCCCCEEeCCCceeec
Confidence 346778999999999965
No 159
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=32.98 E-value=9.1 Score=40.90 Aligned_cols=27 Identities=33% Similarity=0.810 Sum_probs=0.0
Q ss_pred CCCC-CCCeecCceeecCCCCCCCCCCC
Q psy12789 324 VLCS-NHGKYGGGICHCENGWKGPECDI 350 (514)
Q Consensus 324 ~~C~-~~G~c~~~~C~C~~G~~G~~Ce~ 350 (514)
..|. ++|....|.|.|.+||.|+.|+.
T Consensus 467 ~~C~~g~G~~~CG~C~C~~G~~G~~CeC 494 (503)
T 3v4v_B 467 PHCSDGQGHLQCGVCSCAPGRLGRLCES 494 (503)
T ss_dssp ----------------------------
T ss_pred cccCCCCeeEeCCceECcCCCcCCCCCC
Confidence 3565 67888888899999999998863
No 160
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=32.37 E-value=23 Score=40.65 Aligned_cols=25 Identities=40% Similarity=0.840 Sum_probs=14.4
Q ss_pred CCCCCceeeC-C---ceecCCCCCccccC
Q psy12789 359 DCSGHGSCVE-G---TCHCQSGWKGIGCQ 383 (514)
Q Consensus 359 ~C~~~G~C~~-~---~C~C~~Gy~G~~C~ 383 (514)
||.++|.+.. + .|.|++||.|..|+
T Consensus 504 PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce 532 (913)
T 3t5o_A 504 PCPNNGRPTLSGTECLCVCQSGTYGENCE 532 (913)
T ss_dssp CBTTTBEEEEETTEEEEECCTTBCSTTSC
T ss_pred CCCCCCEeecCCCceEEEccCCccccCcc
Confidence 5666666652 2 45566666665554
No 161
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=32.28 E-value=19 Score=34.77 Aligned_cols=19 Identities=37% Similarity=0.887 Sum_probs=15.9
Q ss_pred CeeeccCCceeeecCCCcc
Q psy12789 395 GTCAFENEEYQCVCAEGWA 413 (514)
Q Consensus 395 G~C~~~~Gsy~C~C~~Gy~ 413 (514)
..|.+..++|+|.|.+||.
T Consensus 15 ~~C~~~~~~~~C~C~~G~~ 33 (283)
T 3f1s_B 15 HFCLPGQESYTCSCAQGYR 33 (283)
T ss_dssp SBCCCCTTSCCCBCCTTEE
T ss_pred CEeeCCCCCeEecCCCCcc
Confidence 3578888899999999986
No 162
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=31.40 E-value=77 Score=36.20 Aligned_cols=34 Identities=26% Similarity=0.674 Sum_probs=24.5
Q ss_pred CCCCCCeec----CceeecCCCCCCCCCCCCCCCCCCCCC
Q psy12789 325 LCSNHGKYG----GGICHCENGWKGPECDIPASDCQYSDC 360 (514)
Q Consensus 325 ~C~~~G~c~----~~~C~C~~G~~G~~Ce~~i~eC~~~~C 360 (514)
+|.++|.+. ...|.|++||.|..|+... |...++
T Consensus 504 PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~~--~~~~~~ 541 (913)
T 3t5o_A 504 PCPNNGRPTLSGTECLCVCQSGTYGENCEKQS--PDYKSN 541 (913)
T ss_dssp CBTTTBEEEEETTEEEEECCTTBCSTTSCCBC--SSCCCC
T ss_pred CCCCCCEeecCCCceEEEccCCccccCccCcc--cccccc
Confidence 588888763 3468899999999998654 544444
No 163
>1wz5_A Potassium channel blocking toxin 1; ionic channel inhibitor; HET: ABA; NMR {Pandinus imperator}
Probab=29.84 E-value=13 Score=25.08 Aligned_cols=23 Identities=26% Similarity=0.732 Sum_probs=16.3
Q ss_pred CCCCCCC-----CCCcEEeCCeEecCCC
Q psy12789 289 STCPNGC-----SGHGSCYLGKCDCIDG 311 (514)
Q Consensus 289 ~~Cp~~C-----~~~G~C~~g~C~C~~G 311 (514)
.+|-..| ..+|.|.++.|.|.++
T Consensus 8 ~~C~~~Ck~~~g~~~gKCmNgkC~Cy~~ 35 (35)
T 1wz5_A 8 SDCGRPCQQQTGXPNSKCINRMCKCYGX 35 (35)
T ss_dssp TTTHHHHHHHSCSSCCEEETTEEECSCC
T ss_pred hHHHHHHHHHHCCCCcceeCCcceecCC
Confidence 3454455 4678999999999653
No 164
>1bah_A Charybdotoxin, chabii; neurotoxin, potassium channel inhibitor; HET: PCA ABA; NMR {Leiurus quinquestriatus} SCOP: g.3.7.2 PDB: 2a9h_E* 2crd_A* 1lir_A*
Probab=20.68 E-value=21 Score=24.39 Aligned_cols=22 Identities=27% Similarity=0.546 Sum_probs=16.1
Q ss_pred cCCCCCCC-----CCCcEEeCCeEecC
Q psy12789 288 SSTCPNGC-----SGHGSCYLGKCDCI 309 (514)
Q Consensus 288 ~~~Cp~~C-----~~~G~C~~g~C~C~ 309 (514)
+.+|-..| ..+|.|.++.|.|.
T Consensus 10 s~~C~~~Ck~~~g~~~gKCmNgkC~Cy 36 (37)
T 1bah_A 10 SKEXWSVCQRLHNTSRGKCMNKKXRCY 36 (37)
T ss_dssp TTTTTTHHHHHTSCSCCCBCSSSBCCC
T ss_pred chHHHHHHHHHhCCCCcceeCCCCCcC
Confidence 34566666 56789999999884
Done!