BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12790
(98 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8CGZ0|CHERP_MOUSE Calcium homeostasis endoplasmic reticulum protein OS=Mus musculus
GN=Cherp PE=1 SV=1
Length = 936
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 17 KLDESNKGHQMLKRMGWGGAG-LGAKEQGIEAPISGGEVREREDLYKGVGVSLNDPYENF 75
+L E NKGHQML +MGW G+G LGAKEQGI+ PI GG+VR++ D YKGVGV+L+DPYEN+
Sbjct: 847 RLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQYKGVGVALDDPYENY 906
Query: 76 RKSKKQAFISRMKERQEHT 94
R++K +FI+RMK R E +
Sbjct: 907 RRNKSYSFIARMKARDEFS 925
>sp|Q8IWX8|CHERP_HUMAN Calcium homeostasis endoplasmic reticulum protein OS=Homo sapiens
GN=CHERP PE=1 SV=3
Length = 916
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Query: 17 KLDESNKGHQMLKRMGWGGAG-LGAKEQGIEAPISGGEVREREDLYKGVGVSLNDPYENF 75
+L E NKGHQML +MGW G+G LGAKEQGI+ PI GG+VR++ D YKGVGV+L+DPYEN+
Sbjct: 838 RLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQYKGVGVALDDPYENY 897
Query: 76 RKSKKQAFISRMKERQE 92
R++K +FI+RMK R E
Sbjct: 898 RRNKSYSFIARMKARDE 914
>sp|Q6DDU9|RBM5B_XENLA RNA-binding protein 5-B OS=Xenopus laevis GN=rbm5-b PE=2 SV=1
Length = 749
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 18 LDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPISGGEVRER 57
+D SN G++ML+ MGW G+GLG K QGI API +VR R
Sbjct: 675 IDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQ-AQVRMR 714
>sp|A0JMV4|RBM5A_XENLA RNA-binding protein 5-A OS=Xenopus laevis GN=rbm5-a PE=2 SV=1
Length = 833
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 18 LDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPISGGEVRER 57
+D SN G++ML+ MGW G+GLG K QGI API +VR R
Sbjct: 759 IDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQ-AQVRMR 798
>sp|A4IGK4|RBM5_XENTR RNA-binding protein 5 OS=Xenopus tropicalis GN=rbm5 PE=2 SV=1
Length = 838
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 18 LDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPISGGEVRER 57
+D SN G++ML+ MGW G+GLG K QGI API +VR R
Sbjct: 764 IDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQ-AQVRMR 803
>sp|Q1RMU5|RBM5_BOVIN RNA-binding protein 5 OS=Bos taurus GN=RBM5 PE=2 SV=1
Length = 815
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 18 LDESNKGHQMLKRMGW-GGAGLGAKEQGIEAPI 49
+D SN G++ML+ MGW G+GLG K QGI API
Sbjct: 741 IDHSNIGNKMLQAMGWREGSGLGRKCQGITAPI 773
>sp|P52756|RBM5_HUMAN RNA-binding protein 5 OS=Homo sapiens GN=RBM5 PE=1 SV=2
Length = 815
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 18 LDESNKGHQMLKRMGW-GGAGLGAKEQGIEAPI 49
+D SN G++ML+ MGW G+GLG K QGI API
Sbjct: 741 IDHSNIGNKMLQAMGWREGSGLGRKCQGITAPI 773
>sp|Q8CH09|SUGP2_MOUSE SURP and G-patch domain-containing protein 2 OS=Mus musculus GN=Sugp2
PE=2 SV=2
Length = 1067
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 16 EKLDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPISGGEVREREDLYKGVGVSLNDPYEN 74
+KL + N G QML++MGW G GLG+ +GI P+S G + E E L D ++
Sbjct: 992 QKLTDKNVGFQMLQKMGWKEGHGLGSLGKGIREPVSVGALSEGEGLGADGPEQKEDTFDV 1051
Query: 75 FRKSKKQAF 83
FR+ Q +
Sbjct: 1052 FRQRMMQMY 1060
>sp|Q91YE7|RBM5_MOUSE RNA-binding protein 5 OS=Mus musculus GN=Rbm5 PE=1 SV=1
Length = 815
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 18 LDESNKGHQMLKRMGW-GGAGLGAKEQGIEAPI 49
+D SN G++ML+ MGW G+GLG K QGI API
Sbjct: 741 IDHSNIGNKMLQAMGWREGSGLGRKCQGITAPI 773
>sp|B2GV05|RBM5_RAT RNA-binding protein 5 OS=Rattus norvegicus GN=Rbm5 PE=2 SV=1
Length = 815
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 18 LDESNKGHQMLKRMGW-GGAGLGAKEQGIEAPI 49
+D SN G++ML+ MGW G+GLG K QGI API
Sbjct: 741 IDHSNIGNKMLQAMGWREGSGLGRKCQGITAPI 773
>sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein
OS=Arabidopsis thaliana GN=At3g52120 PE=2 SV=1
Length = 443
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 17 KLDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPISGGEVREREDLYKGVGVSL------- 68
K+ N GH++L +MGW G G+G+ +G+ PI G+V+ GVG S
Sbjct: 357 KIQADNVGHKLLSKMGWKEGEGIGSSRKGMADPIMAGDVKTNN---LGVGASAPGEVKPE 413
Query: 69 NDPYENFRK 77
+D YE ++K
Sbjct: 414 DDIYEQYKK 422
>sp|Q8IWZ8|SUGP1_HUMAN SURP and G-patch domain-containing protein 1 OS=Homo sapiens
GN=SUGP1 PE=1 SV=2
Length = 645
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 15/80 (18%)
Query: 17 KLDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPISGGEVREREDLYKGVGVSLNDP---- 71
KL N G+QML +MGW G GLG++ QGI+ P++ G G G ++ P
Sbjct: 559 KLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTT-----TVDGAGFGIDRPAELS 613
Query: 72 -----YENFRKSKKQAFISR 86
YE FRK A+ R
Sbjct: 614 KEDDEYEAFRKRMMLAYRFR 633
>sp|Q68FU8|SUGP1_RAT SURP and G-patch domain-containing protein 1 OS=Rattus norvegicus
GN=Sugp1 PE=2 SV=1
Length = 644
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Query: 17 KLDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPISGGEVREREDLYKGVGVSLNDP---- 71
KL N G+QML +MGW G GLG + QGI+ P++ G G G ++ P
Sbjct: 558 KLTVENIGYQMLMKMGWKEGEGLGTEGQGIKNPVNKGAT-----TIDGAGFGIDRPAELS 612
Query: 72 -----YENFRKSKKQAFISR 86
YE FRK A+ R
Sbjct: 613 KEDDEYEAFRKRMMLAYRFR 632
>sp|Q8CH02|SUGP1_MOUSE SURP and G-patch domain-containing protein 1 OS=Mus musculus
GN=Sugp1 PE=1 SV=1
Length = 643
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Query: 17 KLDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPISGGEVREREDLYKGVGVSLNDP---- 71
KL N G+QML +MGW G GLG + QGI+ P++ G G G ++ P
Sbjct: 557 KLTVENIGYQMLMKMGWKEGEGLGTEGQGIKNPVNKGAT-----TIDGAGFGIDRPAELS 611
Query: 72 -----YENFRKSKKQAFISR 86
YE FRK A+ R
Sbjct: 612 KEDDEYEAFRKRMMLAYRFR 631
>sp|Q8IX01|SUGP2_HUMAN SURP and G-patch domain-containing protein 2 OS=Homo sapiens GN=SUGP2
PE=1 SV=2
Length = 1082
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 16 EKLDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPISGGEVREREDLYKGVGVSLNDPYEN 74
+KL + N G QML++MGW G GLG+ +GI P+S G E E L D ++
Sbjct: 1007 QKLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPSEGEGLGADGQEHKEDTFDV 1066
Query: 75 FRKSKKQAF 83
FR+ Q +
Sbjct: 1067 FRQRMMQMY 1075
>sp|Q6C233|SQS1_YARLI Protein SQS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=SQS1 PE=3 SV=1
Length = 812
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 18 LDESNKGHQMLKRMGW-GGAGLGAKEQGIEAPI 49
+D+SN G +L++MGW G GLGA+ +GI PI
Sbjct: 767 IDDSNIGRLLLQKMGWTTGEGLGAQSRGISEPI 799
>sp|A5DSB5|SQS1_LODEL Protein SQS1 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS
2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=SQS1 PE=3
SV=1
Length = 792
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 18 LDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPI 49
+D++N G QML+R+GW G GLG +GI PI
Sbjct: 748 IDQNNLGRQMLERLGWSKGMGLGLSGRGINEPI 780
>sp|Q54XG0|Y5282_DICDI Uncharacterized G-patch domain protein DDB_G0278987
OS=Dictyostelium discoideum GN=DDB_G0278987 PE=4 SV=1
Length = 328
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 24 GHQMLKRMGWGGAGLGAKEQGIEAPISGGEVREREDLYKGVGVSLND 70
GH ML +MGW G GLG +E G I V +++ GVG S++D
Sbjct: 14 GHAMLLKMGWKGKGLGVEEDGRTEII----VNKKKQDKVGVGASISD 56
>sp|P70501|RBM10_RAT RNA-binding protein 10 OS=Rattus norvegicus GN=Rbm10 PE=2 SV=1
Length = 852
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 18 LDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPI 49
L N G +ML+ MGW G+GLG K+QGI PI
Sbjct: 778 LGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPI 810
>sp|P98175|RBM10_HUMAN RNA-binding protein 10 OS=Homo sapiens GN=RBM10 PE=1 SV=3
Length = 930
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 18 LDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPI 49
L N G +ML+ MGW G+GLG K+QGI PI
Sbjct: 856 LGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPI 888
>sp|Q99KG3|RBM10_MOUSE RNA-binding protein 10 OS=Mus musculus GN=Rbm10 PE=1 SV=1
Length = 930
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 18 LDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPI 49
L N G +ML+ MGW G+GLG K+QGI PI
Sbjct: 856 LGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPI 888
>sp|Q8BY02|NKRF_MOUSE NF-kappa-B-repressing factor OS=Mus musculus GN=Nkrf PE=2 SV=3
Length = 690
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 16 EKLDESNKGHQMLKRMGWGGAGLGAKEQGIEAPISGGEVREREDL 60
+++ E N G+Q+L++MGW G GLG +GI PIS E +RE L
Sbjct: 547 QQIKEDNIGNQLLRKMGWTGGGLGKSGEGIREPISVKEQHKREGL 591
>sp|O15226|NKRF_HUMAN NF-kappa-B-repressing factor OS=Homo sapiens GN=NKRF PE=1 SV=2
Length = 690
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 16 EKLDESNKGHQMLKRMGWGGAGLGAKEQGIEAPISGGEVREREDL 60
+++ E N G+Q+L++MGW G GLG +GI PIS E +RE L
Sbjct: 547 QQIKEDNIGNQLLRKMGWTGGGLGKSGEGIREPISVKEQHKREGL 591
>sp|Q9CZX5|PINX1_MOUSE PIN2/TERF1-interacting telomerase inhibitor 1 OS=Mus musculus
GN=Pinx1 PE=2 SV=2
Length = 332
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 19 DESNKGHQMLKRMGWG-GAGLGAKEQG 44
D+S G +ML++MGW G GLGA+EQG
Sbjct: 25 DDSKFGQKMLEKMGWSKGKGLGAQEQG 51
>sp|A4L691|PINX1_RAT PIN2/TERF1-interacting telomerase inhibitor 1 OS=Rattus
norvegicus GN=Pinx1 PE=2 SV=1
Length = 331
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 19 DESNKGHQMLKRMGWG-GAGLGAKEQG 44
D+S G +ML++MGW G GLGA+EQG
Sbjct: 25 DDSKFGQKMLEKMGWSKGKGLGAQEQG 51
>sp|Q96BK5|PINX1_HUMAN PIN2/TERF1-interacting telomerase inhibitor 1 OS=Homo sapiens
GN=PINX1 PE=1 SV=2
Length = 328
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 5/53 (9%)
Query: 19 DESNKGHQMLKRMGWG-GAGLGAKEQGIEAPISGGEVREREDLYKGVGVSLND 70
D+S G +ML++MGW G GLGA+EQG I +V+ + + + G+G ++N+
Sbjct: 25 DDSKFGQRMLEKMGWSKGKGLGAQEQGATDHI---KVQVKNN-HLGLGATINN 73
>sp|Q9NW75|GPTC2_HUMAN G patch domain-containing protein 2 OS=Homo sapiens GN=GPATCH2 PE=1
SV=1
Length = 528
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 20 ESNKGHQMLKRMGWG-GAGLGAKEQGIEAPI 49
E+N G++ML+ MGW G+GLG +GI PI
Sbjct: 467 ENNIGNRMLQNMGWTPGSGLGRDGKGISEPI 497
>sp|Q7TQC7|GPTC2_MOUSE G patch domain-containing protein 2 OS=Mus musculus GN=Gpatch2 PE=2
SV=2
Length = 527
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 15 VEKLDESNKGHQMLKRMGWG-GAGLGAKEQGIEAPI 49
+ + ESN G++ML+ MGW G+GLG +GI P+
Sbjct: 461 AQPILESNIGNRMLQSMGWTPGSGLGRDGRGIAEPV 496
>sp|Q875B6|SQS1_PODAS Protein SQS1 OS=Podospora anserina GN=SQS1 PE=3 SV=1
Length = 718
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 7 GGAYGKSGVEKLDESNKGHQMLKRMGWG-GAGLGAKE-QGIEAPIS 50
G G S E L + NKG ML++MGW G LGA E +GI P++
Sbjct: 661 GEVVGASAPE-LGQENKGRAMLEKMGWSKGMALGALENKGILEPVA 705
>sp|A5DEF8|SQS1_PICGU Protein SQS1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS
566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)
GN=SQS1 PE=3 SV=3
Length = 749
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 17 KLDESNKGHQMLKRMGW-GGAGLGAK-EQGIEAPI 49
++D +N G Q+L+++GW G GLGA +GI P+
Sbjct: 699 EIDHTNVGRQLLEKLGWVKGEGLGAHGNKGISEPL 733
>sp|O94585|YQ7D_SCHPO Meiotically up-regulated protein C1442.13c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCC1442.13c PE=1
SV=3
Length = 187
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 23 KGHQMLKRMGWG-GAGLGAKEQGIEAPI 49
KG Q+L+ MGW G GLG++ QG+ P+
Sbjct: 148 KGKQLLEMMGWSRGKGLGSENQGMVDPV 175
>sp|Q9A1P0|SYL_STRP1 Leucine--tRNA ligase OS=Streptococcus pyogenes serotype M1
GN=leuS PE=3 SV=1
Length = 833
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNILHPMGWDAFGLPAEQYAMDT 93
>sp|Q48VJ7|SYL_STRPM Leucine--tRNA ligase OS=Streptococcus pyogenes serotype M28
(strain MGAS6180) GN=leuS PE=3 SV=1
Length = 833
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDT 93
>sp|B5XJI9|SYL_STRPZ Leucine--tRNA ligase OS=Streptococcus pyogenes serotype M49
(strain NZ131) GN=leuS PE=3 SV=1
Length = 833
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDT 93
>sp|Q1JNR2|SYL_STRPC Leucine--tRNA ligase OS=Streptococcus pyogenes serotype M12
(strain MGAS9429) GN=leuS PE=3 SV=1
Length = 833
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDT 93
>sp|Q1JDV2|SYL_STRPB Leucine--tRNA ligase OS=Streptococcus pyogenes serotype M12
(strain MGAS2096) GN=leuS PE=3 SV=1
Length = 833
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDT 93
>sp|Q3JYR6|SYL_STRA1 Leucine--tRNA ligase OS=Streptococcus agalactiae serotype Ia
(strain ATCC 27591 / A909 / CDC SS700) GN=leuS PE=3
SV=1
Length = 833
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDT 93
>sp|P67515|SYL_STRA5 Leucine--tRNA ligase OS=Streptococcus agalactiae serotype V
(strain ATCC BAA-611 / 2603 V/R) GN=leuS PE=3 SV=1
Length = 833
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDT 93
>sp|P67514|SYL_STRA3 Leucine--tRNA ligase OS=Streptococcus agalactiae serotype III
(strain NEM316) GN=leuS PE=3 SV=1
Length = 833
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDT 93
>sp|Q8P2T2|SYL_STRP8 Leucine--tRNA ligase OS=Streptococcus pyogenes serotype M18
(strain MGAS8232) GN=leuS PE=3 SV=1
Length = 833
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDT 93
>sp|A2RCB2|SYL_STRPG Leucine--tRNA ligase OS=Streptococcus pyogenes serotype M5
(strain Manfredo) GN=leuS PE=3 SV=1
Length = 833
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDT 93
>sp|Q5XE35|SYL_STRP6 Leucine--tRNA ligase OS=Streptococcus pyogenes serotype M6
(strain ATCC BAA-946 / MGAS10394) GN=leuS PE=3 SV=1
Length = 833
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDT 93
>sp|P0DG45|SYL_STRPQ Leucine--tRNA ligase OS=Streptococcus pyogenes serotype M3
(strain SSI-1) GN=leuS PE=3 SV=1
Length = 833
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDT 93
>sp|P0DG44|SYL_STRP3 Leucine--tRNA ligase OS=Streptococcus pyogenes serotype M3
(strain ATCC BAA-595 / MGAS315) GN=leuS PE=3 SV=1
Length = 833
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDT 93
>sp|A8XYX2|MTR1A_CAEBR Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1A
OS=Caenorhabditis briggsae GN=CBG20906 PE=3 SV=2
Length = 874
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 20 ESNKGHQMLKRMGW-GGAGLGAKEQGIEAPISGGEVREREDL----YKGVGVSLNDPYEN 74
+ K +M++RMG+ G GLG +QGI+ P++ R + L K V +N+ +++
Sbjct: 60 QKTKAEEMMERMGYKAGEGLGKNKQGIQEPVALSTQRGKTGLGHEGAKAVARDMNEQWDD 119
Query: 75 FRKSK 79
++K
Sbjct: 120 STENK 124
>sp|Q1JIV9|SYL_STRPD Leucine--tRNA ligase OS=Streptococcus pyogenes serotype M2
(strain MGAS10270) GN=leuS PE=3 SV=1
Length = 833
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 1 MKAGHPGGAYGKSGVEKLDESNKGHQMLKRMGWGGAGLGAKEQGIEA 47
+ GHP G Y + + + +GH +L MGW GL A++ ++
Sbjct: 48 LHVGHPEG-YTATDILSRFKRAQGHNVLHPMGWDAFGLPAEQYAMDT 93
>sp|Q09828|SYLM_SCHPO Putative leucine--tRNA ligase, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC4G8.09 PE=3 SV=1
Length = 874
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 16/61 (26%)
Query: 23 KGHQMLKRMGWGGAGLGAKEQGIEAPISGGEVREREDLYKGVGVSLNDPYENFRKSKKQA 82
KG++++ MGW GL A+ IE IS YEN +K K+Q
Sbjct: 94 KGYKVIHPMGWDAFGLPAENAAIENGISASSW----------------TYENIKKMKEQT 137
Query: 83 F 83
+
Sbjct: 138 Y 138
>sp|Q9W4N2|MTR1_DROME Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
OS=Drosophila melanogaster GN=CG6379 PE=2 SV=1
Length = 788
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 21 SNKGHQMLKRMGW-GGAGLGAKEQGIEAPISGGEVREREDLYKGVGVSLN 69
SNK +M+K+MG+ GLG QG PI + ++D +G G+ L+
Sbjct: 26 SNKAMEMMKKMGYENDKGLGKSNQGRLEPI----IAVQQDGRRGFGLKLD 71
>sp|P42698|DR111_ARATH DNA-damage-repair/toleration protein DRT111, chloroplastic
OS=Arabidopsis thaliana GN=DRT111 PE=2 SV=2
Length = 387
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 24 GHQMLKRMGWG-GAGLGAKEQGIEAPISGGEVREREDLYKGVGVSLNDPYENFRKSKKQA 82
+M+ +MGW G GLG EQGI P+ + R GV +N EN S ++
Sbjct: 218 AQRMMAKMGWKQGQGLGKSEQGITTPLMAKKTDRR------AGVIVNA-SENKSSSAEKK 270
Query: 83 FISRMKERQEHTR 95
+ + E TR
Sbjct: 271 VVKSVNINGEPTR 283
>sp|Q59UG4|SQS1_CANAL Protein SQS1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=SQS1 PE=3 SV=1
Length = 705
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 21 SNKGHQMLKRMGW-GGAGLGAK-EQGIEAPI 49
SN G QML+++GW G GLG +GI PI
Sbjct: 663 SNLGRQMLEKLGWIQGQGLGVDGNKGINEPI 693
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.133 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,432,318
Number of Sequences: 539616
Number of extensions: 1857945
Number of successful extensions: 3656
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 3631
Number of HSP's gapped (non-prelim): 75
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)