Query psy12791
Match_columns 393
No_of_seqs 257 out of 2836
Neff 9.9
Searched_HMMs 46136
Date Fri Aug 16 19:43:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12791.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12791hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK08861 cystathionine gamma-s 100.0 5.9E-60 1.3E-64 443.3 44.5 382 8-392 4-386 (388)
2 COG0626 MetC Cystathionine bet 100.0 2.2E-59 4.7E-64 429.9 41.4 383 5-390 3-395 (396)
3 PRK08045 cystathionine gamma-s 100.0 3.9E-58 8.5E-63 432.6 44.3 382 8-392 3-385 (386)
4 TIGR02080 O_succ_thio_ly O-suc 100.0 5.4E-57 1.2E-61 424.7 43.5 379 8-389 2-381 (382)
5 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 1.6E-57 3.4E-62 424.1 37.4 376 11-388 1-386 (386)
6 PRK08776 cystathionine gamma-s 100.0 3.2E-56 6.8E-61 421.8 44.3 382 7-391 10-392 (405)
7 PRK08249 cystathionine gamma-s 100.0 6E-56 1.3E-60 419.4 42.8 380 9-391 8-395 (398)
8 PRK07671 cystathionine beta-ly 100.0 1.4E-55 3.1E-60 414.7 43.6 376 9-388 2-377 (377)
9 PRK07049 methionine gamma-lyas 100.0 1.1E-55 2.3E-60 421.0 42.2 379 8-389 16-426 (427)
10 PRK07811 cystathionine gamma-s 100.0 2.2E-55 4.7E-60 415.4 43.8 382 2-388 5-387 (388)
11 PRK06176 cystathionine gamma-s 100.0 2.9E-55 6.3E-60 412.7 43.9 378 9-390 2-379 (380)
12 PRK06460 hypothetical protein; 100.0 4.4E-55 9.5E-60 411.6 43.5 374 8-390 1-375 (376)
13 PRK09028 cystathionine beta-ly 100.0 2.7E-55 5.9E-60 411.2 41.8 377 8-391 3-389 (394)
14 PRK08064 cystathionine beta-ly 100.0 7.7E-55 1.7E-59 411.9 44.2 383 4-391 1-384 (390)
15 TIGR01328 met_gam_lyase methio 100.0 6.8E-55 1.5E-59 412.0 43.3 378 9-390 3-391 (391)
16 PRK07503 methionine gamma-lyas 100.0 9.5E-55 2.1E-59 412.7 44.0 388 1-391 1-398 (403)
17 PRK06234 methionine gamma-lyas 100.0 1.5E-54 3.2E-59 411.4 43.4 382 7-391 6-399 (400)
18 PRK05967 cystathionine beta-ly 100.0 9.4E-55 2E-59 406.6 41.3 378 6-392 9-394 (395)
19 PRK08248 O-acetylhomoserine am 100.0 7.8E-55 1.7E-59 414.7 41.5 380 9-391 8-429 (431)
20 KOG0053|consensus 100.0 5.1E-55 1.1E-59 395.1 37.8 389 1-391 10-408 (409)
21 PRK08114 cystathionine beta-ly 100.0 8.4E-55 1.8E-59 406.4 40.2 378 7-390 3-394 (395)
22 PRK06702 O-acetylhomoserine am 100.0 1.6E-54 3.5E-59 409.0 41.2 381 5-388 2-423 (432)
23 PRK07504 O-succinylhomoserine 100.0 3.5E-54 7.5E-59 408.2 43.3 384 4-391 5-397 (398)
24 TIGR01329 cysta_beta_ly_E cyst 100.0 6.8E-54 1.5E-58 403.8 43.8 376 10-390 1-376 (378)
25 PRK08574 cystathionine gamma-s 100.0 7.6E-54 1.6E-58 403.7 43.3 376 10-390 3-385 (385)
26 PLN02509 cystathionine beta-ly 100.0 4.6E-54 1E-58 409.5 41.7 381 4-389 81-461 (464)
27 COG2873 MET17 O-acetylhomoseri 100.0 8.5E-55 1.8E-59 381.9 32.5 382 5-389 3-425 (426)
28 PRK07810 O-succinylhomoserine 100.0 9.9E-54 2.2E-58 404.9 42.4 381 4-387 10-402 (403)
29 PRK08133 O-succinylhomoserine 100.0 9.2E-54 2E-58 404.6 41.3 378 6-388 3-389 (390)
30 PRK06767 methionine gamma-lyas 100.0 3.3E-53 7E-58 401.0 41.6 374 7-390 3-386 (386)
31 PRK07812 O-acetylhomoserine am 100.0 1.4E-52 3E-57 398.4 43.4 383 8-392 12-434 (436)
32 PRK06084 O-acetylhomoserine am 100.0 1.2E-52 2.5E-57 399.5 41.9 380 9-390 2-423 (425)
33 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 1.2E-52 2.5E-57 400.6 41.2 376 10-388 2-418 (418)
34 PRK08134 O-acetylhomoserine am 100.0 2.9E-52 6.2E-57 396.8 42.9 384 7-392 6-430 (433)
35 TIGR01325 O_suc_HS_sulf O-succ 100.0 3.3E-52 7.3E-57 393.3 42.6 371 11-387 1-380 (380)
36 TIGR01324 cysta_beta_ly_B cyst 100.0 3.8E-52 8.3E-57 390.3 41.9 371 12-390 1-377 (377)
37 PRK07050 cystathionine beta-ly 100.0 4.7E-52 1E-56 392.8 41.6 375 8-390 8-392 (394)
38 PRK07582 cystathionine gamma-l 100.0 6.9E-52 1.5E-56 388.9 41.1 363 9-390 3-366 (366)
39 PRK05613 O-acetylhomoserine am 100.0 7.5E-52 1.6E-56 393.5 40.5 381 8-390 12-437 (437)
40 cd00614 CGS_like CGS_like: Cys 100.0 9.9E-52 2.2E-56 389.4 41.0 360 28-388 2-369 (369)
41 PRK05994 O-acetylhomoserine am 100.0 2.8E-51 6E-56 391.1 43.1 380 8-389 6-426 (427)
42 PRK07269 cystathionine gamma-s 100.0 1E-50 2.2E-55 379.4 41.9 362 5-388 2-363 (364)
43 PRK05939 hypothetical protein; 100.0 8.7E-51 1.9E-55 383.7 41.5 359 27-389 8-396 (397)
44 PRK08247 cystathionine gamma-s 100.0 3.8E-50 8.3E-55 377.7 41.3 361 9-389 4-364 (366)
45 PRK06434 cystathionine gamma-l 100.0 5E-50 1.1E-54 374.9 39.6 368 9-389 8-384 (384)
46 PLN02242 methionine gamma-lyas 100.0 1.6E-49 3.5E-54 377.1 39.2 372 10-390 18-416 (418)
47 PRK05968 hypothetical protein; 100.0 1.2E-47 2.5E-52 362.9 41.2 366 14-391 13-388 (389)
48 COG0079 HisC Histidinol-phosph 100.0 1.4E-39 3E-44 301.1 22.6 312 23-390 23-351 (356)
49 PRK01688 histidinol-phosphate 100.0 5.6E-36 1.2E-40 280.9 23.0 301 23-387 29-350 (351)
50 PLN03026 histidinol-phosphate 100.0 1.4E-35 3E-40 280.9 25.0 314 18-390 48-379 (380)
51 PRK06959 putative threonine-ph 100.0 3.6E-35 7.8E-40 273.7 27.3 250 3-276 5-268 (339)
52 COG0436 Aspartate/tyrosine/aro 100.0 2.9E-35 6.3E-40 277.2 26.6 309 22-375 28-375 (393)
53 PRK06425 histidinol-phosphate 100.0 9.3E-35 2E-39 270.7 25.6 310 4-390 2-330 (332)
54 PRK06290 aspartate aminotransf 100.0 2.4E-34 5.3E-39 274.4 26.4 248 21-276 43-323 (410)
55 PRK01533 histidinol-phosphate 100.0 1.1E-34 2.3E-39 273.2 23.2 278 22-333 29-326 (366)
56 PRK08056 threonine-phosphate d 100.0 2.1E-34 4.6E-39 271.0 25.3 328 6-390 4-352 (356)
57 PRK07681 aspartate aminotransf 100.0 3.5E-34 7.7E-39 273.6 26.6 318 22-389 32-384 (399)
58 PRK04635 histidinol-phosphate 100.0 3.8E-34 8.2E-39 269.1 25.7 301 23-390 32-352 (354)
59 PRK05664 threonine-phosphate d 100.0 4.8E-34 1E-38 265.6 25.9 313 4-391 2-326 (330)
60 PRK04870 histidinol-phosphate 100.0 1.8E-34 3.9E-39 271.8 23.4 313 21-390 25-355 (356)
61 PRK04781 histidinol-phosphate 100.0 1.5E-33 3.2E-38 265.7 28.1 304 24-391 33-361 (364)
62 PRK06207 aspartate aminotransf 100.0 9.7E-34 2.1E-38 270.6 26.8 307 21-373 38-384 (405)
63 PRK03158 histidinol-phosphate 100.0 9.8E-34 2.1E-38 267.2 26.2 309 23-390 30-358 (359)
64 PRK02610 histidinol-phosphate 100.0 8.2E-34 1.8E-38 268.7 24.3 280 23-330 29-339 (374)
65 PRK06358 threonine-phosphate d 100.0 9.9E-34 2.1E-38 266.0 24.0 325 7-390 4-352 (354)
66 PRK07366 succinyldiaminopimela 100.0 1.7E-33 3.7E-38 268.1 25.6 303 23-373 31-372 (388)
67 PRK00950 histidinol-phosphate 100.0 7.7E-34 1.7E-38 268.3 22.7 319 16-391 28-360 (361)
68 PRK05166 histidinol-phosphate 100.0 4.7E-33 1E-37 263.3 27.4 313 21-391 35-369 (371)
69 PRK14807 histidinol-phosphate 100.0 4.2E-33 9.1E-38 261.7 26.0 309 25-390 25-349 (351)
70 PRK05957 aspartate aminotransf 100.0 7.9E-33 1.7E-37 263.3 28.1 321 23-390 28-386 (389)
71 PRK02731 histidinol-phosphate 100.0 2.8E-33 6E-38 265.0 24.7 314 21-391 31-364 (367)
72 PRK07392 threonine-phosphate d 100.0 4.1E-33 8.8E-38 262.8 25.5 326 6-390 6-356 (360)
73 PRK05387 histidinol-phosphate 100.0 4.6E-33 9.9E-38 262.2 24.3 311 22-391 24-351 (353)
74 PRK09105 putative aminotransfe 100.0 5.6E-33 1.2E-37 262.0 24.6 308 22-391 43-368 (370)
75 TIGR03540 DapC_direct LL-diami 100.0 1.1E-32 2.3E-37 262.3 26.6 317 23-392 30-382 (383)
76 PRK08153 histidinol-phosphate 100.0 1.1E-32 2.4E-37 260.4 25.5 310 24-390 34-362 (369)
77 PRK03317 histidinol-phosphate 100.0 7.7E-33 1.7E-37 261.8 23.9 245 23-276 27-298 (368)
78 PRK09147 succinyldiaminopimela 100.0 3.5E-32 7.7E-37 259.7 28.6 305 23-374 30-379 (396)
79 PRK07324 transaminase; Validat 100.0 3.3E-32 7.2E-37 257.4 27.8 274 51-374 56-353 (373)
80 PRK08068 transaminase; Reviewe 100.0 1.5E-32 3.2E-37 261.7 24.9 315 23-391 33-384 (389)
81 PRK14809 histidinol-phosphate 100.0 2.7E-32 5.8E-37 257.1 26.0 315 12-390 20-354 (357)
82 TIGR01141 hisC histidinol-phos 100.0 5.4E-33 1.2E-37 261.0 21.2 312 19-387 16-345 (346)
83 PRK08960 hypothetical protein; 100.0 3.3E-32 7.1E-37 259.1 26.8 314 23-383 33-378 (387)
84 PRK07908 hypothetical protein; 100.0 1.5E-32 3.3E-37 258.0 23.8 316 10-390 9-344 (349)
85 PRK09276 LL-diaminopimelate am 100.0 2.8E-32 6E-37 259.7 25.8 317 23-392 32-384 (385)
86 TIGR03538 DapC_gpp succinyldia 100.0 5.7E-32 1.2E-36 258.0 27.7 304 23-373 29-377 (393)
87 PRK06348 aspartate aminotransf 100.0 4.6E-32 1E-36 257.8 26.9 304 23-373 30-367 (384)
88 TIGR01140 L_thr_O3P_dcar L-thr 100.0 3.9E-32 8.5E-37 252.9 25.7 315 6-387 1-329 (330)
89 TIGR03537 DapC succinyldiamino 100.0 3.5E-32 7.6E-37 255.5 25.5 296 27-372 6-334 (350)
90 PRK15481 transcriptional regul 100.0 4.4E-32 9.6E-37 261.7 26.4 286 56-390 117-428 (431)
91 PRK06108 aspartate aminotransf 100.0 5E-32 1.1E-36 257.9 26.4 318 23-390 25-379 (382)
92 PRK03321 putative aminotransfe 100.0 2.7E-32 5.9E-37 256.7 23.9 249 17-276 17-286 (352)
93 PRK12414 putative aminotransfe 100.0 8.2E-32 1.8E-36 255.9 26.3 319 23-392 30-383 (384)
94 PLN02450 1-aminocyclopropane-1 100.0 1.1E-31 2.4E-36 259.8 27.5 308 20-376 36-414 (468)
95 PRK07682 hypothetical protein; 100.0 3.2E-32 6.9E-37 258.6 23.4 303 23-373 21-358 (378)
96 PLN02187 rooty/superroot1 100.0 1.1E-31 2.3E-36 259.5 27.3 287 57-388 106-437 (462)
97 PRK06225 aspartate aminotransf 100.0 1E-31 2.2E-36 255.3 26.6 321 22-389 28-372 (380)
98 PLN00175 aminotransferase fami 100.0 1.1E-31 2.4E-36 256.8 25.9 286 59-389 91-409 (413)
99 PRK08361 aspartate aminotransf 100.0 1E-31 2.2E-36 256.2 25.4 304 23-373 34-372 (391)
100 PRK14808 histidinol-phosphate 100.0 4.2E-32 9.2E-37 252.8 20.5 299 22-389 19-333 (335)
101 PRK05942 aspartate aminotransf 100.0 2.7E-31 5.9E-36 253.3 26.0 211 59-276 73-316 (394)
102 PLN02376 1-aminocyclopropane-1 100.0 8.9E-31 1.9E-35 254.3 29.8 312 19-379 43-425 (496)
103 PRK09148 aminotransferase; Val 100.0 4.7E-31 1E-35 252.2 27.5 308 23-378 31-376 (405)
104 PTZ00433 tyrosine aminotransfe 100.0 7.7E-31 1.7E-35 251.4 28.7 294 33-374 49-391 (412)
105 PRK08354 putative aminotransfe 100.0 1.9E-31 4.1E-36 246.2 23.5 189 16-220 2-196 (311)
106 PRK13355 bifunctional HTH-doma 100.0 5.1E-31 1.1E-35 259.1 27.5 248 23-279 147-436 (517)
107 PRK05839 hypothetical protein; 100.0 7.3E-31 1.6E-35 248.5 27.5 294 23-373 25-356 (374)
108 PRK07550 hypothetical protein; 100.0 5.7E-31 1.2E-35 250.6 26.8 319 23-389 30-383 (386)
109 PRK07337 aminotransferase; Val 100.0 7.3E-31 1.6E-35 250.1 26.7 305 23-373 31-371 (388)
110 PRK03967 histidinol-phosphate 100.0 2.1E-31 4.4E-36 248.6 21.5 240 23-275 19-273 (337)
111 PLN00143 tyrosine/nicotianamin 100.0 2.6E-30 5.7E-35 247.2 28.1 272 57-374 72-387 (409)
112 PLN02656 tyrosine transaminase 100.0 2E-30 4.2E-35 248.3 27.2 238 33-278 47-324 (409)
113 PRK07683 aminotransferase A; V 100.0 2.5E-30 5.3E-35 246.1 27.4 245 23-276 29-306 (387)
114 TIGR03542 DAPAT_plant LL-diami 100.0 9.9E-31 2.2E-35 250.0 24.8 248 22-276 33-328 (402)
115 PRK08912 hypothetical protein; 100.0 2.1E-30 4.4E-35 246.9 26.8 277 54-374 57-369 (387)
116 PRK09265 aminotransferase AlaT 100.0 2.9E-30 6.2E-35 247.1 27.9 297 29-372 42-382 (404)
117 PRK07309 aromatic amino acid a 100.0 2.2E-30 4.7E-35 246.8 26.5 246 22-276 30-310 (391)
118 TIGR01264 tyr_amTase_E tyrosin 100.0 4.3E-30 9.2E-35 245.8 27.9 295 32-374 46-382 (401)
119 COG0520 csdA Selenocysteine ly 100.0 3.1E-30 6.7E-35 242.7 26.4 298 58-391 65-403 (405)
120 PRK05764 aspartate aminotransf 100.0 3.2E-30 6.9E-35 246.3 26.9 317 23-390 32-388 (393)
121 PLN00145 tyrosine/nicotianamin 100.0 5.6E-30 1.2E-34 245.9 28.0 216 58-280 93-347 (430)
122 PRK07590 L,L-diaminopimelate a 100.0 2.4E-30 5.2E-35 247.9 25.0 246 22-276 34-335 (409)
123 COG1167 ARO8 Transcriptional r 100.0 1.2E-29 2.6E-34 244.3 28.6 287 58-388 131-451 (459)
124 COG1104 NifS Cysteine sulfinat 100.0 1.3E-30 2.8E-35 236.3 20.4 317 46-391 31-375 (386)
125 PTZ00377 alanine aminotransfer 100.0 1.8E-29 3.8E-34 246.3 30.0 217 58-280 114-389 (481)
126 PRK07568 aspartate aminotransf 100.0 1.1E-29 2.5E-34 242.9 28.1 248 23-279 31-311 (397)
127 PRK08636 aspartate aminotransf 100.0 1.1E-29 2.3E-34 243.0 27.7 273 58-377 70-385 (403)
128 PRK08363 alanine aminotransfer 100.0 7.2E-30 1.6E-34 244.0 26.4 249 23-279 31-318 (398)
129 PRK07865 N-succinyldiaminopime 100.0 6.6E-30 1.4E-34 241.4 25.0 210 55-276 57-295 (364)
130 PRK10874 cysteine sulfinate de 100.0 2.1E-29 4.6E-34 241.2 28.2 294 59-391 63-396 (401)
131 PRK08175 aminotransferase; Val 100.0 1E-29 2.2E-34 242.6 25.5 268 59-372 67-370 (395)
132 TIGR03539 DapC_actino succinyl 100.0 1.7E-29 3.7E-34 237.8 26.7 295 21-373 20-344 (357)
133 PRK06855 aminotransferase; Val 100.0 3.3E-29 7E-34 241.2 28.7 216 57-278 71-327 (433)
134 TIGR01265 tyr_nico_aTase tyros 100.0 3.2E-29 7E-34 239.7 28.2 271 57-374 71-384 (403)
135 PLN02607 1-aminocyclopropane-1 100.0 5.7E-29 1.2E-33 239.1 29.9 282 59-387 95-435 (447)
136 PRK06107 aspartate aminotransf 100.0 5.7E-29 1.2E-33 237.9 28.7 249 23-279 34-317 (402)
137 TIGR03392 FeS_syn_CsdA cystein 100.0 7.7E-29 1.7E-33 237.1 28.1 293 60-391 61-393 (398)
138 PRK09295 bifunctional cysteine 100.0 3.9E-29 8.4E-34 239.6 25.9 294 59-391 67-402 (406)
139 PRK07777 aminotransferase; Val 100.0 4.7E-29 1E-33 237.6 26.1 272 59-373 61-368 (387)
140 PF00155 Aminotran_1_2: Aminot 100.0 4.9E-30 1.1E-34 242.6 17.9 311 23-386 2-362 (363)
141 PRK09082 methionine aminotrans 100.0 3.3E-29 7.2E-34 238.4 23.5 244 23-275 31-308 (386)
142 PRK06836 aspartate aminotransf 100.0 1.1E-28 2.5E-33 235.2 27.0 266 57-373 71-373 (394)
143 PLN02855 Bifunctional selenocy 100.0 3.7E-28 7.9E-33 234.1 26.8 299 60-391 77-416 (424)
144 PLN02672 methionine S-methyltr 100.0 2.1E-28 4.5E-33 249.6 26.1 248 22-276 697-989 (1082)
145 PLN02231 alanine transaminase 100.0 1.8E-27 3.9E-32 232.5 30.5 217 58-280 167-441 (534)
146 KOG0257|consensus 100.0 1.2E-28 2.5E-33 221.3 18.3 220 50-276 62-326 (420)
147 TIGR00858 bioF 8-amino-7-oxono 100.0 1.3E-27 2.9E-32 225.7 24.7 315 22-387 16-359 (360)
148 TIGR01979 sufS cysteine desulf 100.0 4.9E-27 1.1E-31 225.1 27.5 298 60-392 63-400 (403)
149 PLN02368 alanine transaminase 100.0 3.1E-27 6.7E-32 224.2 25.4 220 55-280 102-381 (407)
150 PLN02721 threonine aldolase 100.0 3.2E-27 6.9E-32 222.5 24.6 311 24-391 7-350 (353)
151 KOG0259|consensus 100.0 1.5E-26 3.3E-31 204.2 26.2 223 57-286 101-362 (447)
152 PRK09440 avtA valine--pyruvate 100.0 1.2E-26 2.7E-31 223.1 27.7 258 55-338 69-372 (416)
153 TIGR01977 am_tr_V_EF2568 cyste 100.0 3.4E-27 7.4E-32 224.2 22.2 299 59-389 44-375 (376)
154 TIGR01822 2am3keto_CoA 2-amino 100.0 2.4E-26 5.2E-31 219.6 28.2 285 58-391 82-387 (393)
155 PTZ00376 aspartate aminotransf 100.0 3.5E-26 7.5E-31 218.8 28.0 214 57-276 70-337 (404)
156 cd06502 TA_like Low-specificit 100.0 1.4E-26 3.1E-31 216.8 24.2 307 28-389 3-337 (338)
157 PRK02948 cysteine desulfurase; 100.0 1.4E-26 3E-31 220.3 24.2 304 59-391 43-372 (381)
158 PRK13392 5-aminolevulinate syn 100.0 1.9E-26 4E-31 221.2 24.9 315 27-391 53-395 (410)
159 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 4E-26 8.8E-31 215.8 26.6 312 27-391 8-366 (370)
160 PRK09257 aromatic amino acid a 100.0 3.6E-26 7.9E-31 218.2 26.0 214 57-276 67-332 (396)
161 cd06453 SufS_like Cysteine des 100.0 3.7E-26 8E-31 216.9 25.9 292 59-387 43-373 (373)
162 cd00609 AAT_like Aspartate ami 100.0 4.9E-26 1.1E-30 214.0 26.2 315 27-388 4-349 (350)
163 PRK05958 8-amino-7-oxononanoat 100.0 4.5E-26 9.7E-31 217.3 26.1 319 22-390 39-384 (385)
164 PRK10534 L-threonine aldolase; 100.0 2.6E-26 5.6E-31 214.5 23.4 302 25-391 2-331 (333)
165 PRK09275 aspartate aminotransf 100.0 1.8E-26 4E-31 222.5 22.7 191 25-223 103-328 (527)
166 PRK07179 hypothetical protein; 99.9 1.5E-25 3.3E-30 214.7 28.9 283 58-391 98-396 (407)
167 COG1168 MalY Bifunctional PLP- 99.9 1.8E-25 3.8E-30 199.0 26.9 312 33-390 37-387 (388)
168 TIGR01976 am_tr_V_VC1184 cyste 99.9 8.2E-26 1.8E-30 216.3 26.7 293 60-387 61-397 (397)
169 KOG0633|consensus 99.9 2.3E-26 5E-31 193.2 19.8 304 27-384 47-372 (375)
170 cd06451 AGAT_like Alanine-glyo 99.9 5.7E-26 1.2E-30 214.2 25.0 315 31-392 6-356 (356)
171 TIGR03403 nifS_epsilon cystein 99.9 6.4E-26 1.4E-30 215.7 24.3 305 58-391 38-373 (382)
172 PLN02397 aspartate transaminas 99.9 2.3E-25 5E-30 213.7 28.4 214 57-276 89-355 (423)
173 PRK08637 hypothetical protein; 99.9 5.4E-25 1.2E-29 209.5 30.4 219 50-276 37-312 (388)
174 TIGR03402 FeS_nifS cysteine de 99.9 1.5E-25 3.3E-30 213.0 26.1 300 60-391 43-370 (379)
175 cd06454 KBL_like KBL_like; thi 99.9 3.5E-25 7.7E-30 208.3 27.9 284 58-390 45-348 (349)
176 PLN02483 serine palmitoyltrans 99.9 4.7E-25 1E-29 214.2 28.9 285 58-391 145-464 (489)
177 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 6.8E-25 1.5E-29 207.1 28.7 215 57-280 42-284 (361)
178 TIGR02006 IscS cysteine desulf 99.9 2.9E-25 6.2E-30 212.4 25.7 300 59-391 47-375 (402)
179 PLN02651 cysteine desulfurase 99.9 1.5E-25 3.3E-30 211.6 23.0 293 59-381 43-364 (364)
180 TIGR03801 asp_4_decarbox aspar 99.9 2.4E-25 5.1E-30 214.5 24.4 185 31-223 103-327 (521)
181 PRK06939 2-amino-3-ketobutyrat 99.9 1.2E-24 2.6E-29 208.3 28.4 284 59-391 87-391 (397)
182 PLN03227 serine palmitoyltrans 99.9 2.9E-24 6.2E-29 203.8 28.3 300 53-391 39-380 (392)
183 PLN02822 serine palmitoyltrans 99.9 2.6E-24 5.5E-29 208.7 28.0 289 58-391 153-475 (481)
184 TIGR01825 gly_Cac_T_rel pyrido 99.9 1E-23 2.2E-28 201.0 29.6 284 58-391 77-379 (385)
185 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 6.8E-24 1.5E-28 201.7 27.4 220 53-280 57-303 (387)
186 TIGR01821 5aminolev_synth 5-am 99.9 9.3E-24 2E-28 202.1 28.3 284 58-391 89-394 (402)
187 PRK09064 5-aminolevulinate syn 99.9 8.5E-24 1.8E-28 202.8 27.4 285 57-391 89-395 (407)
188 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 8.1E-24 1.7E-28 199.5 24.9 311 31-390 6-354 (355)
189 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.4E-23 3E-28 197.7 26.3 303 57-388 16-352 (352)
190 PF00266 Aminotran_5: Aminotra 99.9 4E-24 8.6E-29 202.6 22.5 289 59-383 43-371 (371)
191 PRK14012 cysteine desulfurase; 99.9 7.5E-24 1.6E-28 202.8 24.6 301 59-391 49-377 (404)
192 TIGR03576 pyridox_MJ0158 pyrid 99.9 2.3E-23 5E-28 193.9 26.5 272 58-389 53-343 (346)
193 PRK13479 2-aminoethylphosphona 99.9 8.9E-24 1.9E-28 200.1 24.0 315 29-391 10-361 (368)
194 PRK13393 5-aminolevulinate syn 99.9 4.5E-23 9.9E-28 197.5 28.5 284 58-391 89-394 (406)
195 KOG0256|consensus 99.9 3.9E-23 8.4E-28 184.4 25.3 271 59-376 121-445 (471)
196 PLN02409 serine--glyoxylate am 99.9 2.5E-23 5.5E-28 198.5 23.8 194 29-230 14-223 (401)
197 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.3E-22 2.8E-27 191.2 27.1 309 58-391 30-375 (376)
198 TIGR02326 transamin_PhnW 2-ami 99.9 8.3E-23 1.8E-27 193.1 25.9 288 59-391 35-360 (363)
199 TIGR01437 selA_rel uncharacter 99.9 2.3E-22 4.9E-27 189.1 27.5 293 58-390 44-362 (363)
200 TIGR03235 DNA_S_dndA cysteine 99.9 7.5E-23 1.6E-27 192.6 24.2 280 60-371 43-353 (353)
201 TIGR03588 PseC UDP-4-keto-6-de 99.9 4.4E-22 9.6E-27 189.1 29.4 305 58-390 28-379 (380)
202 COG0156 BioF 7-keto-8-aminopel 99.9 2.5E-22 5.4E-27 185.7 26.5 283 58-390 83-387 (388)
203 KOG1549|consensus 99.9 3.2E-23 6.8E-28 188.9 19.9 164 53-221 79-256 (428)
204 PRK03244 argD acetylornithine 99.9 2.1E-23 4.6E-28 199.5 19.9 319 22-391 43-392 (398)
205 cd00613 GDC-P Glycine cleavage 99.9 2.7E-22 5.8E-27 192.1 27.2 282 61-387 66-398 (398)
206 COG0399 WecE Predicted pyridox 99.9 4.4E-22 9.5E-27 182.6 25.9 306 58-391 33-371 (374)
207 TIGR03812 tyr_de_CO2_Arch tyro 99.9 2.3E-22 5E-27 190.9 24.6 277 59-390 59-373 (373)
208 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.1E-21 2.4E-26 185.7 28.8 307 57-391 31-377 (379)
209 PRK00011 glyA serine hydroxyme 99.9 3.2E-22 7E-27 192.4 25.3 327 22-391 25-387 (416)
210 TIGR00707 argD acetylornithine 99.9 9.3E-23 2E-27 194.0 20.2 318 22-390 27-378 (379)
211 PRK13520 L-tyrosine decarboxyl 99.9 1.2E-21 2.5E-26 185.9 26.8 277 61-392 61-370 (371)
212 cd00378 SHMT Serine-glycine hy 99.9 1.5E-21 3.3E-26 187.1 26.5 293 58-391 60-383 (402)
213 PLN02955 8-amino-7-oxononanoat 99.9 3.3E-21 7.1E-26 182.3 27.4 280 59-391 147-459 (476)
214 PRK13238 tnaA tryptophanase/L- 99.9 4.2E-21 9.1E-26 184.7 27.9 298 57-391 76-431 (460)
215 cd06450 DOPA_deC_like DOPA dec 99.9 3.5E-22 7.7E-27 187.6 20.1 264 59-389 34-344 (345)
216 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 8.5E-21 1.8E-25 179.6 28.7 306 59-390 31-373 (375)
217 TIGR00474 selA seryl-tRNA(sec) 99.9 7.4E-22 1.6E-26 188.3 20.7 211 60-276 123-371 (454)
218 cd00610 OAT_like Acetyl ornith 99.9 7.5E-22 1.6E-26 189.9 20.3 322 22-390 36-412 (413)
219 PRK05937 8-amino-7-oxononanoat 99.9 2.8E-21 6.2E-26 182.7 23.9 277 58-391 55-348 (370)
220 PRK00854 rocD ornithine--oxo-a 99.9 6.1E-21 1.3E-25 182.7 26.4 286 57-391 81-399 (401)
221 PF01041 DegT_DnrJ_EryC1: DegT 99.9 1.8E-21 4E-26 183.4 22.2 305 58-388 24-363 (363)
222 TIGR01814 kynureninase kynuren 99.9 4.5E-21 9.8E-26 183.7 23.5 149 70-221 80-247 (406)
223 PRK04311 selenocysteine syntha 99.9 7.4E-21 1.6E-25 181.9 24.6 213 59-277 127-377 (464)
224 PRK04073 rocD ornithine--oxo-a 99.9 1.3E-20 2.8E-25 179.9 25.4 283 57-390 80-394 (396)
225 PRK15407 lipopolysaccharide bi 99.9 6.6E-20 1.4E-24 175.7 29.9 307 59-391 63-434 (438)
226 PRK07505 hypothetical protein; 99.9 5.4E-20 1.2E-24 176.0 28.7 284 57-391 89-397 (402)
227 PRK00451 glycine dehydrogenase 99.9 2E-20 4.4E-25 181.6 25.2 284 62-391 115-446 (447)
228 KOG0634|consensus 99.9 7.8E-20 1.7E-24 164.7 26.3 294 50-385 93-459 (472)
229 PRK13034 serine hydroxymethylt 99.9 3.1E-20 6.8E-25 177.5 25.1 319 28-391 35-390 (416)
230 PRK02627 acetylornithine amino 99.9 1.9E-20 4.1E-25 179.2 23.6 319 23-391 40-392 (396)
231 PLN02724 Molybdenum cofactor s 99.9 7.6E-20 1.6E-24 187.9 26.9 314 58-390 77-485 (805)
232 PRK01278 argD acetylornithine 99.9 9.4E-20 2E-24 173.7 24.6 285 57-390 71-385 (389)
233 PRK04366 glycine dehydrogenase 99.9 1.1E-19 2.3E-24 176.8 24.6 162 61-229 115-297 (481)
234 cd00617 Tnase_like Tryptophana 99.9 6.5E-19 1.4E-23 167.3 28.5 211 57-276 51-310 (431)
235 cd00615 Orn_deC_like Ornithine 99.9 1.3E-20 2.8E-25 172.5 16.4 158 56-221 56-234 (294)
236 PRK03080 phosphoserine aminotr 99.8 1.4E-19 3.1E-24 171.3 21.9 282 59-391 48-371 (378)
237 PRK05093 argD bifunctional N-s 99.8 7.7E-19 1.7E-23 168.1 24.5 285 58-390 81-397 (403)
238 PRK02936 argD acetylornithine 99.8 1E-18 2.2E-23 166.0 24.1 278 59-390 71-376 (377)
239 PTZ00125 ornithine aminotransf 99.8 1.4E-18 2.9E-23 166.5 24.8 283 58-390 72-392 (400)
240 TIGR03246 arg_catab_astC succi 99.8 3.6E-18 7.8E-23 162.9 25.0 288 56-390 74-392 (397)
241 PRK12381 bifunctional succinyl 99.8 9.2E-18 2E-22 160.6 25.3 287 56-390 78-396 (406)
242 COG0075 Serine-pyruvate aminot 99.8 1.6E-17 3.4E-22 152.5 25.0 241 29-277 10-285 (383)
243 PTZ00094 serine hydroxymethylt 99.8 6.9E-18 1.5E-22 163.4 23.9 284 64-391 85-406 (452)
244 PRK04260 acetylornithine amino 99.8 2.8E-18 6.1E-23 162.7 20.4 311 23-390 30-374 (375)
245 cd00611 PSAT_like Phosphoserin 99.8 2.5E-18 5.5E-23 161.5 19.5 278 59-391 44-354 (355)
246 cd01494 AAT_I Aspartate aminot 99.8 1.9E-18 4.2E-23 144.9 16.6 154 61-221 2-170 (170)
247 TIGR01364 serC_1 phosphoserine 99.8 4.2E-17 9.2E-22 152.1 24.2 279 59-392 37-347 (349)
248 PRK05355 3-phosphoserine/phosp 99.8 2.6E-17 5.6E-22 154.3 22.4 279 59-392 48-357 (360)
249 TIGR01788 Glu-decarb-GAD gluta 99.8 4.7E-17 1E-21 155.0 24.0 290 59-390 80-426 (431)
250 PLN02414 glycine dehydrogenase 99.8 5E-17 1.1E-21 166.4 25.8 161 61-230 570-756 (993)
251 COG2008 GLY1 Threonine aldolas 99.8 7E-17 1.5E-21 144.1 23.1 304 34-391 11-341 (342)
252 PRK13580 serine hydroxymethylt 99.8 1.1E-16 2.4E-21 151.9 25.7 287 64-391 100-443 (493)
253 PRK02769 histidine decarboxyla 99.8 1E-16 2.2E-21 150.6 25.3 215 59-282 65-316 (380)
254 TIGR01885 Orn_aminotrans ornit 99.8 7.1E-17 1.5E-21 154.5 24.4 285 57-390 77-399 (401)
255 KOG1368|consensus 99.8 1.9E-17 4.2E-22 142.3 17.1 300 39-389 38-364 (384)
256 PLN03032 serine decarboxylase; 99.8 4.9E-17 1.1E-21 151.7 21.2 251 15-276 25-314 (374)
257 PLN02624 ornithine-delta-amino 99.8 1.3E-16 2.7E-21 155.0 24.6 286 56-390 114-441 (474)
258 TIGR00713 hemL glutamate-1-sem 99.8 5.3E-17 1.2E-21 156.5 20.5 211 35-253 65-311 (423)
259 TIGR01366 serC_3 phosphoserine 99.8 2.2E-16 4.7E-21 148.4 22.2 286 59-392 41-359 (361)
260 COG3977 Alanine-alpha-ketoisov 99.7 3.6E-16 7.8E-21 134.7 21.2 297 53-391 67-413 (417)
261 TIGR03531 selenium_SpcS O-phos 99.7 6.7E-16 1.5E-20 146.4 22.4 209 60-276 106-344 (444)
262 COG4992 ArgD Ornithine/acetylo 99.7 8.3E-16 1.8E-20 140.0 20.9 307 35-389 59-394 (404)
263 PLN00144 acetylornithine trans 99.7 2.2E-15 4.9E-20 142.6 24.4 281 57-390 55-377 (382)
264 PRK08088 4-aminobutyrate amino 99.7 4.8E-15 1E-19 142.7 26.2 286 58-390 83-420 (425)
265 PRK04612 argD acetylornithine 99.7 6.4E-15 1.4E-19 140.3 26.6 289 57-390 80-400 (408)
266 PF06838 Met_gamma_lyase: Meth 99.7 3E-15 6.5E-20 133.5 20.9 251 57-327 52-332 (403)
267 TIGR02618 tyr_phenol_ly tyrosi 99.7 1.8E-14 3.9E-19 135.0 26.4 211 57-276 69-328 (450)
268 PF12897 Aminotran_MocR: Alani 99.7 2.4E-14 5.2E-19 128.6 25.5 290 50-383 58-406 (425)
269 KOG1360|consensus 99.7 4.2E-15 9.1E-20 132.8 20.0 284 59-391 216-522 (570)
270 PLN02271 serine hydroxymethylt 99.7 2.7E-14 5.8E-19 136.4 25.5 237 66-327 201-491 (586)
271 TIGR00700 GABAtrnsam 4-aminobu 99.7 4E-14 8.7E-19 136.0 26.9 286 56-390 73-417 (420)
272 PRK09792 4-aminobutyrate trans 99.7 2.2E-14 4.8E-19 137.6 24.5 286 57-391 81-419 (421)
273 PRK06777 4-aminobutyrate amino 99.7 3E-14 6.6E-19 136.6 25.5 287 56-391 80-419 (421)
274 PRK08360 4-aminobutyrate amino 99.7 4.4E-14 9.6E-19 135.9 26.7 282 58-390 83-423 (443)
275 PRK05964 adenosylmethionine--8 99.7 3.9E-14 8.5E-19 136.3 25.1 288 56-391 82-420 (423)
276 PRK03715 argD acetylornithine 99.7 2.4E-14 5.1E-19 136.1 23.2 285 58-391 77-391 (395)
277 PF01276 OKR_DC_1: Orn/Lys/Arg 99.6 4.2E-15 9E-20 138.8 16.2 209 57-274 64-315 (417)
278 PRK08117 4-aminobutyrate amino 99.6 5.8E-14 1.3E-18 135.5 24.7 292 56-390 83-426 (433)
279 KOG1359|consensus 99.6 5.6E-15 1.2E-19 127.0 15.3 282 58-392 111-411 (417)
280 PLN03226 serine hydroxymethylt 99.6 1.9E-13 4.1E-18 132.1 27.5 210 58-275 75-332 (475)
281 PRK13237 tyrosine phenol-lyase 99.6 1.1E-13 2.4E-18 130.0 25.1 210 57-275 76-334 (460)
282 PRK05367 glycine dehydrogenase 99.6 3.4E-14 7.4E-19 146.4 22.2 157 62-229 124-292 (954)
283 PLN02880 tyrosine decarboxylas 99.6 9.5E-14 2.1E-18 134.9 24.0 286 59-391 118-482 (490)
284 TIGR03799 NOD_PanD_pyr putativ 99.6 1.5E-13 3.3E-18 133.8 25.3 179 98-283 210-426 (522)
285 TIGR02407 ectoine_ectB diamino 99.6 1.5E-13 3.2E-18 131.5 24.8 285 58-391 77-410 (412)
286 TIGR03372 putres_am_tran putre 99.6 1.9E-13 4.1E-18 131.0 25.3 289 57-390 115-441 (442)
287 PLN02414 glycine dehydrogenase 99.6 6E-14 1.3E-18 144.1 22.6 161 61-229 150-320 (993)
288 PRK11522 putrescine--2-oxoglut 99.6 5.7E-14 1.2E-18 135.5 21.2 309 37-390 101-448 (459)
289 KOG2862|consensus 99.6 5.8E-13 1.2E-17 115.7 24.6 210 60-276 51-301 (385)
290 PRK05367 glycine dehydrogenase 99.6 1.7E-13 3.8E-18 141.3 25.3 286 61-391 544-873 (954)
291 COG1103 Archaea-specific pyrid 99.6 5E-13 1.1E-17 113.9 23.3 213 58-279 60-301 (382)
292 PRK06918 4-aminobutyrate amino 99.6 3.2E-13 6.9E-18 130.8 25.2 285 57-390 95-440 (451)
293 PRK00062 glutamate-1-semialdeh 99.6 1.6E-13 3.4E-18 132.0 22.7 213 56-274 87-336 (426)
294 PRK04013 argD acetylornithine/ 99.6 9E-14 1.9E-18 130.1 20.4 298 31-389 36-356 (364)
295 PRK08593 4-aminobutyrate amino 99.6 5.7E-13 1.2E-17 128.5 26.1 284 56-390 82-426 (445)
296 TIGR00461 gcvP glycine dehydro 99.6 2.3E-13 5.1E-18 138.1 24.2 160 61-229 532-717 (939)
297 PRK15029 arginine decarboxylas 99.6 1.5E-13 3.3E-18 137.4 22.5 157 57-221 203-400 (755)
298 PRK09264 diaminobutyrate--2-ox 99.6 5.4E-13 1.2E-17 128.2 25.2 289 57-390 80-413 (425)
299 PF01212 Beta_elim_lyase: Beta 99.6 1.7E-15 3.7E-20 136.7 7.1 236 35-278 7-272 (290)
300 PF04864 Alliinase_C: Allinase 99.6 4.4E-14 9.6E-19 125.2 15.3 288 59-390 43-362 (363)
301 PRK06058 4-aminobutyrate amino 99.6 1.4E-12 3.1E-17 125.9 27.1 286 57-391 97-440 (443)
302 PLN02590 probable tyrosine dec 99.6 7.3E-13 1.6E-17 128.9 24.9 287 58-391 165-530 (539)
303 COG0112 GlyA Glycine/serine hy 99.6 2.6E-13 5.6E-18 122.2 20.0 236 64-327 77-340 (413)
304 PRK07495 4-aminobutyrate amino 99.6 6.5E-13 1.4E-17 127.3 23.4 288 55-389 79-417 (425)
305 COG0160 GabT 4-aminobutyrate a 99.6 2.6E-12 5.6E-17 120.7 26.2 323 22-390 56-442 (447)
306 PRK12566 glycine dehydrogenase 99.6 9.7E-13 2.1E-17 132.9 24.3 164 61-230 545-731 (954)
307 PF00464 SHMT: Serine hydroxym 99.6 6.1E-13 1.3E-17 123.8 21.1 240 64-327 71-356 (399)
308 COG1448 TyrB Aspartate/tyrosin 99.5 5.3E-12 1.2E-16 113.4 24.8 250 57-328 67-368 (396)
309 PRK13578 ornithine decarboxyla 99.5 1.1E-12 2.5E-17 130.0 22.0 157 57-221 172-369 (720)
310 TIGR00709 dat 2,4-diaminobutyr 99.5 5E-12 1.1E-16 122.0 25.3 285 56-390 79-432 (442)
311 KOG1357|consensus 99.5 9.5E-14 2.1E-18 126.2 11.9 284 59-391 182-500 (519)
312 TIGR01365 serC_2 phosphoserine 99.5 2E-12 4.4E-17 120.9 21.0 278 59-389 39-369 (374)
313 COG3844 Kynureninase [Amino ac 99.5 1.8E-12 4E-17 113.4 19.1 159 62-221 79-244 (407)
314 KOG0258|consensus 99.5 8.1E-13 1.7E-17 118.1 17.1 218 58-281 112-387 (475)
315 KOG1358|consensus 99.5 3.7E-13 8.1E-18 120.3 14.3 293 60-392 140-464 (467)
316 PRK05639 4-aminobutyrate amino 99.5 1.7E-11 3.8E-16 118.3 26.7 283 58-390 95-440 (457)
317 PRK06541 hypothetical protein; 99.5 8E-12 1.7E-16 120.9 24.3 289 56-390 92-452 (460)
318 PLN02263 serine decarboxylase 99.5 1.5E-11 3.3E-16 116.9 24.8 207 63-277 137-382 (470)
319 COG0076 GadB Glutamate decarbo 99.5 2.7E-12 5.9E-17 122.8 19.7 229 60-312 98-380 (460)
320 PRK05769 4-aminobutyrate amino 99.5 2.1E-11 4.6E-16 117.5 26.0 287 56-390 94-436 (441)
321 PRK07678 aminotransferase; Val 99.5 2.8E-11 6.1E-16 117.0 26.0 292 56-391 86-447 (451)
322 COG0001 HemL Glutamate-1-semia 99.5 2E-12 4.4E-17 119.3 16.9 230 39-275 74-341 (432)
323 PRK13360 omega amino acid--pyr 99.5 2.4E-11 5.2E-16 117.0 25.1 287 57-391 87-438 (442)
324 COG4100 Cystathionine beta-lya 99.5 2.1E-11 4.6E-16 105.5 21.8 249 58-327 64-343 (416)
325 PRK09221 beta alanine--pyruvat 99.5 2.4E-11 5.2E-16 117.2 24.9 288 56-391 89-441 (445)
326 PRK05965 hypothetical protein; 99.5 3.2E-11 6.9E-16 116.8 25.8 285 57-389 88-443 (459)
327 PRK05630 adenosylmethionine--8 99.5 1.4E-11 3E-16 118.0 23.0 285 57-391 81-418 (422)
328 PRK06149 hypothetical protein; 99.4 1.6E-11 3.5E-16 129.0 23.5 320 22-390 585-967 (972)
329 PRK12462 phosphoserine aminotr 99.4 4.5E-11 9.7E-16 110.7 23.6 276 59-391 49-360 (364)
330 PRK06943 adenosylmethionine--8 99.4 6.8E-11 1.5E-15 114.2 25.8 286 56-390 94-443 (453)
331 PRK07046 aminotransferase; Val 99.4 6.6E-11 1.4E-15 114.2 25.7 212 57-274 113-362 (453)
332 PRK07482 hypothetical protein; 99.4 6.9E-11 1.5E-15 114.5 25.3 304 37-390 69-451 (461)
333 PRK07986 adenosylmethionine--8 99.4 3.5E-11 7.5E-16 115.3 22.9 284 57-390 84-420 (428)
334 PLN02760 4-aminobutyrate:pyruv 99.4 9.1E-11 2E-15 114.5 26.1 286 57-390 131-488 (504)
335 PLN02452 phosphoserine transam 99.4 1.9E-11 4E-16 114.4 20.3 277 59-391 52-361 (365)
336 PRK12403 putative aminotransfe 99.4 6.2E-11 1.3E-15 114.8 24.5 212 57-274 96-365 (460)
337 PRK06105 aminotransferase; Pro 99.4 1E-10 2.2E-15 113.3 25.7 216 55-275 88-364 (460)
338 PRK06938 diaminobutyrate--2-ox 99.4 7.8E-11 1.7E-15 114.1 24.7 285 56-390 103-457 (464)
339 PRK06173 adenosylmethionine--8 99.4 3.7E-11 8E-16 115.3 21.2 283 56-389 84-421 (429)
340 PRK06082 4-aminobutyrate amino 99.4 1.3E-10 2.7E-15 112.5 24.9 288 55-389 109-447 (459)
341 PRK06062 hypothetical protein; 99.4 1.7E-10 3.6E-15 111.5 25.7 284 55-390 91-442 (451)
342 PRK07481 hypothetical protein; 99.4 2.4E-10 5.2E-15 110.5 25.8 287 56-390 83-442 (449)
343 PRK15400 lysine decarboxylase 99.4 3.5E-11 7.6E-16 119.4 20.3 147 57-211 193-373 (714)
344 PRK00615 glutamate-1-semialdeh 99.4 1.8E-10 3.9E-15 110.5 24.4 212 57-274 91-340 (433)
345 PRK12389 glutamate-1-semialdeh 99.4 3.3E-10 7.1E-15 109.1 26.3 213 56-274 90-339 (428)
346 PF03841 SelA: L-seryl-tRNA se 99.4 8.1E-13 1.8E-17 119.6 6.9 166 62-234 50-238 (367)
347 PRK06931 diaminobutyrate--2-ox 99.4 5.2E-10 1.1E-14 108.3 26.5 285 56-390 98-451 (459)
348 PRK07030 adenosylmethionine--8 99.4 4.3E-10 9.3E-15 109.0 25.7 213 56-274 87-360 (466)
349 PRK15399 lysine decarboxylase 99.4 2.8E-10 6E-15 113.1 24.4 155 57-221 193-381 (713)
350 PRK06917 hypothetical protein; 99.3 1.1E-09 2.4E-14 105.8 27.5 291 56-390 71-434 (447)
351 PRK07480 putative aminotransfe 99.3 4.2E-10 9.2E-15 108.8 24.4 213 56-274 91-362 (456)
352 KOG1404|consensus 99.3 7.5E-11 1.6E-15 105.9 16.7 288 53-387 86-432 (442)
353 PRK08742 adenosylmethionine--8 99.3 4.7E-10 1E-14 108.7 23.7 194 56-255 104-360 (472)
354 TIGR00508 bioA adenosylmethion 99.3 4E-10 8.6E-15 108.3 22.9 285 57-391 86-424 (427)
355 PRK07036 hypothetical protein; 99.3 1.3E-09 2.9E-14 105.7 26.4 236 56-312 92-389 (466)
356 PRK06148 hypothetical protein; 99.3 1.3E-10 2.8E-15 122.4 20.5 320 22-390 624-1007(1013)
357 PLN02482 glutamate-1-semialdeh 99.3 3.5E-10 7.7E-15 109.4 21.8 213 57-275 137-386 (474)
358 PRK06916 adenosylmethionine--8 99.3 5.3E-10 1.1E-14 108.4 23.1 285 57-390 97-452 (460)
359 TIGR03251 LAT_fam L-lysine 6-t 99.3 7.6E-10 1.7E-14 106.6 23.2 282 57-389 83-430 (431)
360 PRK08297 L-lysine aminotransfe 99.3 1.3E-09 2.8E-14 105.2 24.6 281 56-391 89-439 (443)
361 COG0161 BioA Adenosylmethionin 99.3 4.5E-10 9.8E-15 105.1 20.4 288 56-391 85-445 (449)
362 COG1921 SelA Selenocysteine sy 99.3 7.2E-11 1.6E-15 107.9 14.0 172 64-244 73-258 (395)
363 PRK07483 hypothetical protein; 99.3 2.8E-09 6E-14 102.9 25.3 290 56-389 70-433 (443)
364 PF00282 Pyridoxal_deC: Pyrido 99.3 9.8E-11 2.1E-15 110.2 14.6 218 58-282 74-360 (373)
365 COG0403 GcvP Glycine cleavage 99.2 5.8E-09 1.2E-13 95.3 24.1 188 39-229 93-297 (450)
366 COG1982 LdcC Arginine/lysine/o 99.2 5.5E-10 1.2E-14 106.8 16.2 156 58-221 69-246 (557)
367 PF02347 GDC-P: Glycine cleava 99.2 2.8E-09 6E-14 100.0 19.9 270 62-387 113-429 (429)
368 TIGR00461 gcvP glycine dehydro 99.2 3.2E-09 7E-14 108.4 21.7 158 62-229 112-280 (939)
369 TIGR00699 GABAtrns_euk 4-amino 99.2 3.9E-09 8.5E-14 101.6 21.0 202 133-390 238-463 (464)
370 PF00202 Aminotran_3: Aminotra 99.2 4.3E-10 9.3E-15 104.9 13.6 194 56-255 56-293 (339)
371 KOG1402|consensus 99.1 1.4E-08 3.1E-13 89.4 19.9 233 60-312 102-370 (427)
372 PLN02974 adenosylmethionine-8- 99.1 2.1E-08 4.6E-13 102.3 23.4 196 143-390 584-815 (817)
373 TIGR02617 tnaA_trp_ase tryptop 99.1 7.6E-09 1.7E-13 96.7 18.1 215 57-275 72-343 (467)
374 PRK06209 glutamate-1-semialdeh 99.1 1.5E-08 3.3E-13 97.6 20.4 208 61-274 90-327 (431)
375 TIGR03811 tyr_de_CO2_Ent tyros 99.0 3.4E-07 7.3E-12 90.6 27.1 171 99-276 224-475 (608)
376 COG1003 GcvP Glycine cleavage 99.0 3.9E-09 8.5E-14 96.3 11.9 159 62-229 112-293 (496)
377 KOG1401|consensus 98.9 3E-07 6.6E-12 83.7 19.1 208 61-274 100-346 (433)
378 KOG1411|consensus 98.9 3.9E-08 8.5E-13 87.2 12.5 247 59-327 95-394 (427)
379 KOG2467|consensus 98.7 6E-06 1.3E-10 74.2 20.1 235 69-327 96-377 (477)
380 PRK12566 glycine dehydrogenase 98.7 5.8E-06 1.3E-10 84.7 22.4 156 62-229 127-294 (954)
381 KOG1383|consensus 98.7 5.2E-07 1.1E-11 83.4 13.4 174 100-280 173-377 (491)
382 COG1932 SerC Phosphoserine ami 98.6 5.7E-06 1.2E-10 74.8 19.2 273 60-391 51-361 (365)
383 KOG1412|consensus 98.5 9.8E-06 2.1E-10 71.3 17.6 246 59-327 74-374 (410)
384 KOG0628|consensus 98.5 7.2E-06 1.6E-10 75.9 17.3 246 57-327 107-427 (511)
385 KOG0629|consensus 98.4 7.8E-05 1.7E-09 68.5 19.6 208 68-282 150-419 (510)
386 KOG3846|consensus 98.3 3.7E-05 8.1E-10 67.6 15.5 165 64-232 116-302 (465)
387 PF05889 SLA_LP_auto_ag: Solub 98.3 7E-05 1.5E-09 69.1 16.7 154 71-231 68-247 (389)
388 KOG1403|consensus 98.2 1.9E-05 4.2E-10 69.1 10.9 204 144-390 210-438 (452)
389 KOG1405|consensus 98.0 7.8E-05 1.7E-09 66.9 11.0 175 133-331 255-448 (484)
390 COG3033 TnaA Tryptophanase [Am 97.9 0.0013 2.9E-08 59.4 17.2 217 51-276 73-346 (471)
391 KOG2040|consensus 97.8 0.00051 1.1E-08 66.5 13.5 208 61-277 584-837 (1001)
392 KOG2040|consensus 97.8 5.2E-05 1.1E-09 73.1 6.2 162 39-206 136-309 (1001)
393 PLN02994 1-aminocyclopropane-1 97.5 0.00028 6E-09 57.5 5.8 50 59-108 92-152 (153)
394 KOG2790|consensus 94.8 2.8 6.2E-05 37.3 16.0 153 60-229 53-225 (370)
395 KOG3843|consensus 91.7 1.1 2.3E-05 39.4 8.0 152 75-235 76-253 (432)
396 PF05368 NmrA: NmrA-like famil 82.5 3.7 8.1E-05 35.8 6.2 87 83-175 8-95 (233)
397 PF02310 B12-binding: B12 bind 74.3 7.3 0.00016 29.9 4.9 88 112-201 18-110 (121)
398 TIGR01470 cysG_Nterm siroheme 73.2 50 0.0011 28.3 10.2 92 76-183 11-104 (205)
399 COG0031 CysK Cysteine synthase 67.6 14 0.0003 33.6 5.7 89 77-168 65-165 (300)
400 PRK04296 thymidine kinase; Pro 65.7 26 0.00056 29.6 6.8 96 81-183 12-115 (190)
401 PLN02476 O-methyltransferase 64.9 59 0.0013 29.4 9.1 120 59-186 104-233 (278)
402 cd02068 radical_SAM_B12_BD B12 63.7 33 0.00071 26.6 6.6 70 115-187 9-81 (127)
403 PLN02672 methionine S-methyltr 62.8 1.5E+02 0.0032 32.5 13.0 169 53-234 419-628 (1082)
404 COG1088 RfbB dTDP-D-glucose 4, 61.0 33 0.00073 31.2 6.7 132 78-211 3-173 (340)
405 PF13460 NAD_binding_10: NADH( 60.3 41 0.0009 27.7 7.1 76 88-172 13-88 (183)
406 COG0552 FtsY Signal recognitio 58.1 62 0.0013 30.0 8.0 102 84-185 153-271 (340)
407 PF01596 Methyltransf_3: O-met 56.3 77 0.0017 27.2 8.1 123 59-187 31-161 (205)
408 PF00106 adh_short: short chai 56.1 53 0.0012 26.4 7.0 95 77-171 2-110 (167)
409 PF14258 DUF4350: Domain of un 54.8 65 0.0014 21.9 6.5 60 114-180 10-70 (70)
410 KOG1805|consensus 53.6 96 0.0021 33.1 9.3 132 64-207 674-832 (1100)
411 PF00265 TK: Thymidine kinase; 53.2 24 0.00052 29.4 4.4 99 81-184 11-113 (176)
412 TIGR03649 ergot_EASG ergot alk 52.7 59 0.0013 29.2 7.3 88 78-175 2-97 (285)
413 COG2984 ABC-type uncharacteriz 52.5 82 0.0018 29.0 7.8 83 98-184 160-249 (322)
414 COG4098 comFA Superfamily II D 51.6 1.2E+02 0.0027 28.2 8.7 113 58-189 99-218 (441)
415 COG1648 CysG Siroheme synthase 51.5 1.6E+02 0.0035 25.4 12.4 92 76-182 14-106 (210)
416 PF00290 Trp_syntA: Tryptophan 50.9 1E+02 0.0022 27.6 8.1 74 98-172 117-196 (259)
417 cd02067 B12-binding B12 bindin 50.7 68 0.0015 24.4 6.4 70 113-184 18-91 (119)
418 PRK05562 precorrin-2 dehydroge 50.6 1.7E+02 0.0037 25.5 11.5 91 76-181 27-118 (223)
419 CHL00200 trpA tryptophan synth 49.5 96 0.0021 27.8 7.8 10 144-153 145-154 (263)
420 PRK10681 DNA-binding transcrip 49.1 1.9E+02 0.0042 25.6 9.9 44 60-103 78-121 (252)
421 COG2004 RPS24A Ribosomal prote 48.5 25 0.00054 26.5 3.3 24 57-80 30-54 (107)
422 PF01282 Ribosomal_S24e: Ribos 48.4 21 0.00046 25.7 2.9 24 57-80 11-35 (84)
423 COG0505 CarA Carbamoylphosphat 48.2 55 0.0012 30.5 6.1 68 98-171 180-249 (368)
424 COG1184 GCD2 Translation initi 48.2 2.2E+02 0.0048 26.1 10.1 102 76-184 121-232 (301)
425 TIGR02026 BchE magnesium-proto 47.3 72 0.0016 31.6 7.4 68 117-187 31-105 (497)
426 COG0514 RecQ Superfamily II DN 47.0 86 0.0019 31.6 7.7 100 77-186 37-144 (590)
427 KOG1251|consensus 46.9 1.3E+02 0.0027 26.7 7.7 98 76-179 75-180 (323)
428 COG0373 HemA Glutamyl-tRNA red 45.7 2.6E+02 0.0056 27.0 10.4 94 76-182 180-274 (414)
429 COG0300 DltE Short-chain dehyd 45.1 1E+02 0.0023 27.6 7.3 63 76-138 7-73 (265)
430 cd02072 Glm_B12_BD B12 binding 44.9 98 0.0021 24.3 6.3 69 112-182 17-89 (128)
431 PLN02591 tryptophan synthase 44.8 1.7E+02 0.0036 26.1 8.5 81 98-179 108-194 (250)
432 COG0159 TrpA Tryptophan syntha 44.4 1.4E+02 0.0029 26.8 7.8 12 144-155 148-159 (265)
433 PRK05580 primosome assembly pr 43.9 3.1E+02 0.0067 28.5 11.6 94 81-187 172-272 (679)
434 PLN02589 caffeoyl-CoA O-methyl 43.8 2.3E+02 0.005 25.1 10.4 121 59-186 65-195 (247)
435 COG1954 GlpP Glycerol-3-phosph 43.6 43 0.00094 27.6 4.2 48 132-184 12-60 (181)
436 PRK10646 ADP-binding protein; 43.6 1.7E+02 0.0038 23.7 7.8 89 59-155 12-113 (153)
437 PF02367 UPF0079: Uncharacteri 43.0 1.1E+02 0.0025 23.7 6.4 87 62-155 2-100 (123)
438 TIGR03573 WbuX N-acetyl sugar 42.9 1.5E+02 0.0033 27.7 8.5 119 61-185 42-171 (343)
439 TIGR01425 SRP54_euk signal rec 42.6 2.6E+02 0.0055 27.2 10.0 92 93-184 124-225 (429)
440 PF00455 DeoRC: DeoR C termina 42.6 1.9E+02 0.004 23.6 10.5 42 62-103 7-48 (161)
441 PRK13125 trpA tryptophan synth 42.4 1.4E+02 0.0031 26.2 7.9 46 114-160 121-168 (244)
442 PRK10886 DnaA initiator-associ 42.0 2.2E+02 0.0047 24.2 8.6 43 134-181 101-143 (196)
443 TIGR00595 priA primosomal prot 41.2 1.5E+02 0.0033 29.4 8.6 96 79-187 5-107 (505)
444 PF02254 TrkA_N: TrkA-N domain 40.9 1.2E+02 0.0025 22.8 6.3 71 78-153 2-72 (116)
445 KOG1371|consensus 40.3 73 0.0016 29.4 5.6 67 76-142 3-75 (343)
446 PRK12935 acetoacetyl-CoA reduc 39.3 1.7E+02 0.0036 25.4 7.9 77 76-152 7-93 (247)
447 PTZ00293 thymidine kinase; Pro 39.0 1.1E+02 0.0024 26.4 6.3 99 81-185 14-114 (211)
448 COG1066 Sms Predicted ATP-depe 38.6 2.3E+02 0.0051 27.2 8.7 88 88-179 112-215 (456)
449 PRK01178 rps24e 30S ribosomal 38.4 45 0.00097 24.9 3.3 24 57-80 29-53 (99)
450 PF10087 DUF2325: Uncharacteri 37.9 1.6E+02 0.0035 21.5 6.4 64 113-181 14-82 (97)
451 TIGR01501 MthylAspMutase methy 37.5 1.3E+02 0.0029 23.8 6.1 59 112-172 19-79 (134)
452 PRK06935 2-deoxy-D-gluconate 3 36.5 2.5E+02 0.0054 24.5 8.7 72 67-140 6-82 (258)
453 COG2185 Sbm Methylmalonyl-CoA 36.5 1.4E+02 0.0031 23.9 6.1 72 99-172 14-90 (143)
454 PRK08329 threonine synthase; V 36.4 2.5E+02 0.0053 26.3 8.8 56 72-131 102-159 (347)
455 PF07085 DRTGG: DRTGG domain; 35.6 1.2E+02 0.0027 22.5 5.6 49 124-179 42-90 (105)
456 PLN02970 serine racemase 34.7 1.4E+02 0.003 27.8 6.8 52 76-131 77-130 (328)
457 PRK07102 short chain dehydroge 34.7 2.4E+02 0.0052 24.3 8.2 73 77-149 3-82 (243)
458 TIGR00640 acid_CoA_mut_C methy 34.1 1.4E+02 0.0031 23.5 5.8 72 107-180 15-90 (132)
459 PRK05993 short chain dehydroge 33.8 3.4E+02 0.0073 24.1 9.2 60 76-140 5-66 (277)
460 PF04371 PAD_porph: Porphyromo 33.7 60 0.0013 30.2 4.2 122 54-181 161-311 (329)
461 TIGR00262 trpA tryptophan synt 33.4 2.5E+02 0.0055 25.0 8.0 10 144-153 141-150 (256)
462 PRK08063 enoyl-(acyl carrier p 33.4 1.5E+02 0.0033 25.7 6.7 76 76-152 5-91 (250)
463 PF01008 IF-2B: Initiation fac 33.4 2.4E+02 0.0052 25.4 8.1 98 77-180 109-216 (282)
464 PRK12937 short chain dehydroge 33.3 2.4E+02 0.0052 24.2 8.0 76 76-151 6-91 (245)
465 PRK02261 methylaspartate mutas 33.1 1.7E+02 0.0037 23.2 6.2 59 112-172 21-81 (137)
466 PRK12743 oxidoreductase; Provi 33.1 2.4E+02 0.0052 24.6 8.0 73 77-150 4-87 (256)
467 PRK05638 threonine synthase; V 33.0 3.1E+02 0.0068 26.7 9.2 55 73-131 111-167 (442)
468 PRK10416 signal recognition pa 32.8 4E+02 0.0087 24.6 13.3 124 60-184 88-245 (318)
469 PRK11889 flhF flagellar biosyn 32.5 4.3E+02 0.0094 25.6 9.5 91 92-184 264-363 (436)
470 PRK13111 trpA tryptophan synth 32.5 2.9E+02 0.0063 24.7 8.2 55 114-174 109-167 (258)
471 cd01562 Thr-dehyd Threonine de 32.4 1.7E+02 0.0037 26.6 7.0 52 76-131 67-120 (304)
472 COG1748 LYS9 Saccharopine dehy 32.4 3.2E+02 0.007 26.1 8.8 104 76-185 3-127 (389)
473 PF04392 ABC_sub_bind: ABC tra 32.3 99 0.0021 28.0 5.4 78 98-179 132-216 (294)
474 PRK06194 hypothetical protein; 31.5 2.7E+02 0.0058 24.7 8.2 77 76-153 7-93 (287)
475 KOG2865|consensus 31.4 2.5E+02 0.0054 25.7 7.3 95 76-175 61-169 (391)
476 KOG0352|consensus 31.2 2.6E+02 0.0056 27.0 7.7 80 141-229 111-194 (641)
477 PRK03659 glutathione-regulated 31.1 3.3E+02 0.0071 27.8 9.3 94 76-179 402-496 (601)
478 COG0079 HisC Histidinol-phosph 30.8 28 0.0006 32.8 1.5 35 292-327 313-350 (356)
479 cd04736 MDH_FMN Mandelate dehy 30.8 2E+02 0.0043 27.2 7.1 70 114-184 228-299 (361)
480 PRK07666 fabG 3-ketoacyl-(acyl 30.6 3E+02 0.0065 23.6 8.1 79 76-155 8-96 (239)
481 PRK06721 threonine synthase; R 30.5 3.1E+02 0.0066 25.8 8.5 53 76-131 77-131 (352)
482 PRK13397 3-deoxy-7-phosphohept 30.4 2.6E+02 0.0056 24.9 7.3 70 116-186 116-196 (250)
483 CHL00194 ycf39 Ycf39; Provisio 30.3 3.5E+02 0.0075 24.7 8.8 91 78-175 3-102 (317)
484 cd06448 L-Ser-dehyd Serine deh 30.2 3.3E+02 0.0071 25.1 8.5 78 76-157 53-136 (316)
485 PF03435 Saccharop_dh: Sacchar 30.2 3.4E+02 0.0074 25.7 8.9 93 78-183 2-99 (386)
486 PRK05678 succinyl-CoA syntheta 30.1 1.7E+02 0.0038 26.6 6.4 75 102-184 49-126 (291)
487 COG1349 GlpR Transcriptional r 29.8 4E+02 0.0086 23.6 10.9 38 61-98 78-115 (253)
488 cd02070 corrinoid_protein_B12- 29.5 1.8E+02 0.0038 24.8 6.2 70 112-183 100-174 (201)
489 PRK06139 short chain dehydroge 29.4 2.6E+02 0.0056 25.9 7.7 64 76-140 8-75 (330)
490 PF07279 DUF1442: Protein of u 29.4 3.8E+02 0.0082 23.2 11.3 120 56-184 24-152 (218)
491 TIGR00511 ribulose_e2b2 ribose 29.4 4.5E+02 0.0097 24.1 10.1 97 76-179 117-222 (301)
492 TIGR00150 HI0065_YjeE ATPase, 29.2 2.9E+02 0.0063 21.8 7.2 89 60-156 7-108 (133)
493 PRK05601 DNA polymerase III su 28.7 60 0.0013 30.6 3.2 58 121-186 296-366 (377)
494 cd08071 MPN_DUF2466 Mov34/MPN/ 28.5 1E+02 0.0023 23.5 4.1 40 135-176 51-97 (113)
495 TIGR00223 panD L-aspartate-alp 28.4 46 0.001 25.8 2.0 37 89-130 74-110 (126)
496 COG0816 Predicted endonuclease 28.4 1.3E+02 0.0027 24.2 4.6 54 132-185 41-100 (141)
497 COG0108 RibB 3,4-dihydroxy-2-b 28.4 1.2E+02 0.0026 25.8 4.6 35 143-179 156-190 (203)
498 PF00926 DHBP_synthase: 3,4-di 28.2 1.2E+02 0.0026 25.8 4.7 35 143-179 152-186 (194)
499 PRK08535 translation initiatio 28.0 4.8E+02 0.01 24.0 9.1 98 76-180 122-228 (310)
500 PRK13551 agmatine deiminase; P 27.9 1.3E+02 0.0028 28.4 5.4 48 54-102 175-228 (362)
No 1
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=5.9e-60 Score=443.34 Aligned_cols=382 Identities=40% Similarity=0.644 Sum_probs=348.9
Q ss_pred CCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH
Q psy12791 8 TAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV 87 (393)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al 87 (393)
++++|.++|+|..+++.. ++..+|++.+++|....... ...+.|+|+++|....|+++||++.|.+..+++++|++++
T Consensus 4 ~~~~t~~~~~~~~~~~~~-~~~~~pi~~~st~~~~~~~~-~~~~~Y~R~~npt~~~Le~~lA~leg~e~ivvt~gg~~Ai 81 (388)
T PRK08861 4 RKPATIAVRTGIESDSQY-HAVVPPIYLSTNYGFPAFGE-VPKYDYTRSGNPNRGLLEQTLSELESGKGAVVTNCGTSAL 81 (388)
T ss_pred CCcccceeECCCCCCCCC-CCccCCcccCcceEeCCcCc-cCCccccCCCCchHHHHHHHHHHHhCCCeEEEECCHHHHH
Confidence 368899999997665433 57888999999997665433 2358899999999999999999999987777777777788
Q ss_pred -HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHH
Q psy12791 88 -TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAIS 166 (393)
Q Consensus 88 -~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~ 166 (393)
.++.+++++||+|+++.|+|++++..+.......|++++.++..|++++++++.+++++|++++|+||||.++|+++|.
T Consensus 82 ~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~ 161 (388)
T PRK08861 82 NLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALDAALAKKPKLILLETPSNPLVRVVDIAELC 161 (388)
T ss_pred HHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHH
Confidence 7777889999999999999998776666666778899999988899999999988999999999999999999999999
Q ss_pred HHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHH
Q psy12791 167 AVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCW 246 (393)
Q Consensus 167 ~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
++|+++ |+++|+|++|..+..+.|++.++|+++.|+||+++|+.++++|+++++++++.++++..+...|...+|++++
T Consensus 162 ~la~~~-gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~ 240 (388)
T PRK08861 162 QKAKAV-GALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSY 240 (388)
T ss_pred HHHHHc-CCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHH
Confidence 999999 9999999999988878888889999999999999989999999999876788888888888889999999999
Q ss_pred HHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcC
Q psy12791 247 LVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLL 326 (393)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 326 (393)
+++++++++..|++++.+++..+++||+.+|.|.+|.||+++++++|.++.+++.++|++++|.++++.+...+|+++|+
T Consensus 241 l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~ 320 (388)
T PRK08861 241 MTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALA 320 (388)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999766888999999999
Q ss_pred ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 327 IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 327 ~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
.+..+.++|+.+|+..+|..++|..++.+.+...|++++.||||+|.|+.|+++++|.+||+++++
T Consensus 321 l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 321 LFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLEDAQDLIADLDQAFAKAAE 386 (388)
T ss_pred cceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999899989999999999999999999999999999998875
No 2
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-59 Score=429.94 Aligned_cols=383 Identities=50% Similarity=0.801 Sum_probs=356.1
Q ss_pred CCCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCC-------CCCccccCCCCchHHHHHHHHHHHhCCCcE
Q psy12791 5 PQDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQP-------PQGFEYSRSNNPTRRNLERCIASLEEAKHG 77 (393)
Q Consensus 5 ~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-------~~~~~y~~~~~~~~~~lr~~la~~~~~~~~ 77 (393)
.+..++.|.++|+|..+++.. ++..+|++.+++|...-.+.. ...+.|+|+.+|....|++++|++.|.+++
T Consensus 3 ~~~~~~~T~~v~~g~~~~~~~-gav~~PI~~tStf~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~lE~~~a~LEg~~~~ 81 (396)
T COG0626 3 KAKLSLTTRLVHAGRRPDDLT-GAVNPPIYLTSTFVFDSAGEGLDAFAGEEGGYDYSRTGNPTRDALEEALAELEGGEDA 81 (396)
T ss_pred ccccccceeeEEcccccccCC-CcccCCeeeeeeecccChhhhhhhccccccCcccccCCCccHHHHHHHHHHhhCCCcE
Confidence 345678999999999886665 589999999999888654421 346889999999999999999999999999
Q ss_pred EEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcC-CCCcEEEEecCCCC
Q psy12791 78 LCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIK-PNTKMVWIENPTNP 155 (393)
Q Consensus 78 i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~-~~~~~v~l~~p~np 155 (393)
+.++||+.|| .+++.++++||+|++++..|++++..+....+++|+++.+++..+.+++.+++. ++|++||+++|.||
T Consensus 82 ~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP 161 (396)
T COG0626 82 FAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNP 161 (396)
T ss_pred EEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCc
Confidence 9999999999 778999999999999999999999999999999999999999888777777777 58999999999999
Q ss_pred cccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH-
Q psy12791 156 LMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN- 234 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~- 234 (393)
+..+.|+++|.++|+++ |+++|+|++++.++++.|+..|+||++.|.+|+++|...+.+|.++++++++.+.+.....
T Consensus 162 ~l~v~DI~~i~~~A~~~-g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~ 240 (396)
T COG0626 162 LLEVPDIPAIARLAKAY-GALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRA 240 (396)
T ss_pred ccccccHHHHHHHHHhc-CCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHh
Confidence 99999999999999999 9999999999999999999999999999999999999999999888777788888765555
Q ss_pred hcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC
Q psy12791 235 SMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG 314 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
.+|..++|+++++++++++++..|++++.+|++++++||+.+|.+++|.||+++++++|+++.|++.++|++++|.+++.
T Consensus 241 ~~G~~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~ 320 (396)
T COG0626 241 NTGAVLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE 320 (396)
T ss_pred hcCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh
Confidence 58999999999999999999999999999999999999999999999999999999999999999988999999999655
Q ss_pred HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 315 AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+.+.+|++.|+.+..+.|+|+++|++.+|+.++|..++.+.....|+.++.||||+|.|++++++++|.+||+++
T Consensus 321 -~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 321 -EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGLEDVEDLIADLEQALAKA 395 (396)
T ss_pred -HHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 889999999999999999999999999999999999999999999999999999999999999999999999875
No 3
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=3.9e-58 Score=432.56 Aligned_cols=382 Identities=39% Similarity=0.645 Sum_probs=346.6
Q ss_pred CCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH
Q psy12791 8 TAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV 87 (393)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al 87 (393)
+++.|.++|.|..++... ++..+|+..+++|.....+. ...+.|+||++|....|+++||+++|.++.+++++|++++
T Consensus 3 ~~~~t~~~~~~~~~~~~~-~~~~~pi~~~s~~~~~~~~~-~~~~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai 80 (386)
T PRK08045 3 RKQATIAVRSGLNDDEQY-GCVVPPIHLSSTYNFTGFNE-PRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAI 80 (386)
T ss_pred CCcccceeEcCCCCCCCC-CCccCCccCCcceecCCccc-cCCceeeCCCCccHHHHHHHHHHHhCCCeEEEECCHHHHH
Confidence 468899999996554333 57889999999998765443 2358899999999999999999999988888888888888
Q ss_pred -HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHH
Q psy12791 88 -TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAIS 166 (393)
Q Consensus 88 -~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~ 166 (393)
.++..++++||+|++++|+|++++..+...+...|+++..++..|++++++.+.+++++|++++|+||||.++|+++|.
T Consensus 81 ~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~ 160 (386)
T PRK08045 81 HLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKIC 160 (386)
T ss_pred HHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHH
Confidence 7777889999999999999998777777766677778888887789999999988999999999999999999999999
Q ss_pred HHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHH
Q psy12791 167 AVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCW 246 (393)
Q Consensus 167 ~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
++|+++ |+++|+|++|..+....++..++|+++.|++|+++|++++++|+++++++++.++++......+...++.+++
T Consensus 161 ~ia~~~-g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~ 239 (386)
T PRK08045 161 HLAREA-GAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSY 239 (386)
T ss_pred HHHHHc-CCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 999999 9999999999988777788889999999999999999999999999876889888887888889999999999
Q ss_pred HHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcC
Q psy12791 247 LVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLL 326 (393)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 326 (393)
++.++++++..|++++.+|+..+++||+.+|.+.+|.+|+++++++|.++.+.+.++|++++|.++++.+...+|+++|+
T Consensus 240 l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~ 319 (386)
T PRK08045 240 LLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLS 319 (386)
T ss_pred HHHhhhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999767788899999999
Q ss_pred ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 327 IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 327 ~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
.+..+.|+|+++|+..+|..++|..+..+.....|++++.||||+|.|+.|+++++|.+||+++.+
T Consensus 320 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~~~ 385 (386)
T PRK08045 320 LFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANK 385 (386)
T ss_pred ceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999888888999999999999999999999999999998754
No 4
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=5.4e-57 Score=424.69 Aligned_cols=379 Identities=42% Similarity=0.686 Sum_probs=340.4
Q ss_pred CCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH
Q psy12791 8 TAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV 87 (393)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al 87 (393)
..++|.++|.|..++... .+..+|+..++.+....... ...+.|+||++|...+|++++|++.|.++.+++++|++++
T Consensus 2 ~~~~t~~~~~~~~~~~~~-~~~~~pi~~ss~~~~~~~~~-~~~~~Y~R~~~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai 79 (382)
T TIGR02080 2 RKQATIAVRSGLNSDTQY-GCVVPPIYLSTTYNFTGFNE-PRAYDYSRSGNPTRDLLQQALAELEGGAGAVVTNTGMSAI 79 (382)
T ss_pred CCcccceeecCCCCCCCC-CCccCCeeCCceeEeCCcCc-cCCCcccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHH
Confidence 467899999996654322 47788999988886543222 2346799999999999999999999977777777777788
Q ss_pred -HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHH
Q psy12791 88 -TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAIS 166 (393)
Q Consensus 88 -~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~ 166 (393)
.++.+++++||+|+++.|+|++++..+...+...|+++..++..|++++++++++++++|++++|+||||.++|+++|.
T Consensus 80 ~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~ 159 (382)
T TIGR02080 80 HLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKIC 159 (382)
T ss_pred HHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHH
Confidence 7777889999999999999998877776666777889998887789999999988999999999999999999999999
Q ss_pred HHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHH
Q psy12791 167 AVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCW 246 (393)
Q Consensus 167 ~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
++|+++ |+++|+|++|..+....++..+.|++++|+||+++|++++++|+++++++++.++++..+...|...++++++
T Consensus 160 ~la~~~-g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~ 238 (382)
T TIGR02080 160 HLAKAV-GAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSY 238 (382)
T ss_pred HHHHHc-CCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHH
Confidence 999999 9999999999987766677778999999999999889999999998877889999988888889999999999
Q ss_pred HHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcC
Q psy12791 247 LVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLL 326 (393)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 326 (393)
+++++++++..|++++.+|+..+.+||+.+|.|.+|.+|+++++++|.++.+.+.|+|++++|.++++.+...+|+++|+
T Consensus 239 l~lr~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~ 318 (382)
T TIGR02080 239 LTLRGLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGLS 318 (382)
T ss_pred HHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999766788899999999
Q ss_pred ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 327 IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 327 ~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
.+..+.|+|+++|++++|..++|..++.+.+...|++++.||||+|.|+.|++++++.+||++
T Consensus 319 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~dl~~dl~~al~~ 381 (382)
T TIGR02080 319 LFTLAESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGLEDADDLIADLEQGLRA 381 (382)
T ss_pred cceEeccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999888889999999999999999999999999999975
No 5
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=1.6e-57 Score=424.08 Aligned_cols=376 Identities=49% Similarity=0.816 Sum_probs=328.2
Q ss_pred cceeeccCCCCCCCCCCCCCCCCccCCeeeeC-------CCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccH
Q psy12791 11 ATKAVHIGSEPDQWRSQCVIPPIILSTTFKQN-------TPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSG 83 (393)
Q Consensus 11 ~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~-------~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G 83 (393)
+|+++|+|..+++...++..+|++.+++|..+ .... ...+.|+|+++|....|+++||++.|.+++++++||
T Consensus 1 ~T~~vh~g~~~~~~~~~~v~~pi~~sstf~~~~~~~~~~~~~~-~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~SG 79 (386)
T PF01053_consen 1 ETLLVHAGRDPDEDQTGAVNPPIYQSSTFVFDSAEELDAFAGE-EKGYIYSRYGNPTVRALEQRLAALEGGEDALLFSSG 79 (386)
T ss_dssp HHHHHHTTTTGGTSTTTBSS--B---SBBBBSSHHHHHHHTTS-SSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEESSH
T ss_pred CcceEeCCCCCCCCCCCCeeCCccccccCcccchHHHHhhcCC-CCCcceeccccccHHHHHHHHHHhhcccceeeccch
Confidence 47889999998752226899999999999987 2222 446999999999999999999999999999999999
Q ss_pred HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCH
Q psy12791 84 LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDV 162 (393)
Q Consensus 84 ~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 162 (393)
+.|+ .++.+++++||+|+++...|++++..+...+...|+++.+++..|++++++++++++++||++.|.||+..+.|+
T Consensus 80 maAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl 159 (386)
T PF01053_consen 80 MAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRPNTKLVFLESPSNPTLEVPDL 159 (386)
T ss_dssp HHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCTTEEEEEEESSBTTTTB---H
T ss_pred HHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhccccceEEEEEcCCCcccccccH
Confidence 9999 888899999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCC-cEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecC-hHHHHHHHHHHHhcCCCC
Q psy12791 163 KAISAVVKQHPD-ILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTND-DSLQARLKFLQNSMGVVP 240 (393)
Q Consensus 163 ~~l~~l~~~~~~-~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (393)
++|.++|+++ | +++++|++++.++.+.|+..|+|+++.|.+|+++|...+.+|.+++++ +++.++++......|...
T Consensus 160 ~~i~~~a~~~-g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~ 238 (386)
T PF01053_consen 160 EAIAKLAKEH-GDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATL 238 (386)
T ss_dssp HHHHHHHHHT-TT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B-
T ss_pred HHHHHHHHHh-CCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccc
Confidence 9999999999 9 999999999999888999999999999999999999999999999886 688888988888999999
Q ss_pred CHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHH
Q psy12791 241 SPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRI 320 (393)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
++.+++++.++++++..|++++.+|++++++||+.+|.+++|.+|+++++++|.++.+.+.++|++++|.+++..+.+.+
T Consensus 239 ~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~ 318 (386)
T PF01053_consen 239 SPFDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARR 318 (386)
T ss_dssp -HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHH
T ss_pred hHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999654469999
Q ss_pred HHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 321 FLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 321 ~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
|+++|+.+..+.|+|+.+|++++|..++|..++.+.....|++++.||||+|.|+.++++++|.+||+
T Consensus 319 f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 319 FLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLEDPDDLIADLEQALE 386 (386)
T ss_dssp HHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHHH
T ss_pred HHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEeccCCHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999985
No 6
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=3.2e-56 Score=421.81 Aligned_cols=382 Identities=41% Similarity=0.665 Sum_probs=344.4
Q ss_pred CCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHH
Q psy12791 7 DTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGA 86 (393)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~a 86 (393)
+-++.|.++|+|..++... ++..+|+..++.+....... ...+.|+|+++|...+|++++|+++|.++++++++|+++
T Consensus 10 ~~~~~t~~~~~~~~~~~~~-~~~~~pi~~ss~~~~~~~~~-~~~~~y~R~~~p~~~~Le~~lA~l~g~~~~v~~~sG~~A 87 (405)
T PRK08776 10 PCSAATAAVRAGIDRDTAY-GAVTPPIVLSSNFSFDGFGN-KRQYDYTRSGNPTRDLLGEALAELEGGAGGVITATGMGA 87 (405)
T ss_pred CcCccchheeCCCCCCCCC-CCccCCEeccceEEeCCCCc-ccCCcccCCCChHHHHHHHHHHHHhCCCceEEEcCHHHH
Confidence 3458888999996654332 57788999998876544322 235789999999999999999999999999999999988
Q ss_pred H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHH
Q psy12791 87 V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAI 165 (393)
Q Consensus 87 l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l 165 (393)
+ .++.+++++||+|+++.|+|++++..+...++..|++++.++..|++++++.+++++++|++++|+||||.+.++++|
T Consensus 88 i~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I 167 (405)
T PRK08776 88 INLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADALAQSPKLVLIETPSNPLLRITDLRFV 167 (405)
T ss_pred HHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHH
Confidence 8 777788999999999999999887777777788899999999889999999998889999999999999999999999
Q ss_pred HHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHH
Q psy12791 166 SAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDC 245 (393)
Q Consensus 166 ~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (393)
.++|+++ |+++|+|++|..+....++..++|+++.|++|+++|+.++.+|+++++++++.+++.......+...+++++
T Consensus 168 ~~la~~~-gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a 246 (405)
T PRK08776 168 IEAAHKV-GALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDA 246 (405)
T ss_pred HHHHHHc-CCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHH
Confidence 9999999 999999999998766677778899999999999987888899999987788888887777777777899999
Q ss_pred HHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhc
Q psy12791 246 WLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESL 325 (393)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (393)
++..++++++..+++++.+|+..+.++|+.+|.+.+|.+|+++++++|.++.+++.++|++++|.++++.+.+.+|+++|
T Consensus 247 ~l~~~gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l 326 (405)
T PRK08776 247 FLTLRGLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGL 326 (405)
T ss_pred HHHHhhhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999976788889999999
Q ss_pred CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 326 LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 326 ~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.+..+.++|+.+|++++|..++|..++.+.+...|++++.||||+|.|+.|+++++|.+||+++.
T Consensus 327 ~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~~ 392 (405)
T PRK08776 327 RYFTLAESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLARAE 392 (405)
T ss_pred CcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999988888899999999999999999999999999998764
No 7
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=6e-56 Score=419.37 Aligned_cols=380 Identities=33% Similarity=0.580 Sum_probs=340.7
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEec
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYS 81 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~ 81 (393)
++.|.++|+|..+++.. .+..+|++.+++|.....+. -...+.|+|+++|...+|++++|+++|.+++++++
T Consensus 8 ~~~t~~~~~~~~~~~~~-~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~s 86 (398)
T PRK08249 8 GVGTKAVWAGEKEYLPY-GATQVPVVLSVAYGYDDIDEWYDVALGKKPGHIYSRNTNPTVQAFEEKVRILEGAEAATAFS 86 (398)
T ss_pred CcccceeeCCCCCCCCC-CCccCCccCCcceecCCHHHHHHhhcCCcCCccccCCCChHHHHHHHHHHHHhCCCeEEEeC
Confidence 57899999996554322 57789999999997654321 12357899999999999999999999999999999
Q ss_pred cHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccccc
Q psy12791 82 SGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 82 ~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 160 (393)
+|++++ .++.+++++||+|+++.++|+++...+...++..|+++++++..|+++++++++++|++|++++|+||||.++
T Consensus 87 sG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i~~~tklV~ie~p~NPtg~v~ 166 (398)
T PRK08249 87 TGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEIAKGCDLLYLETPTNPTLKIV 166 (398)
T ss_pred ChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhcCCCCeEEEEECCCCCCCccC
Confidence 999998 7777889999999999999998877777777889999999998899999999998999999999999999999
Q ss_pred CHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCC
Q psy12791 161 DVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVP 240 (393)
Q Consensus 161 ~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 240 (393)
|+++|.++|+++ |+++|+|++|+.+....+...++|++++|+||+++|+.+..+|+++++ ++++++++..+...+...
T Consensus 167 dl~~I~~la~~~-gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~-~~l~~~l~~~~~~~g~~~ 244 (398)
T PRK08249 167 DIERLAAAAKKV-GALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGS-KELMEQVYHYREINGATM 244 (398)
T ss_pred CHHHHHHHHHHc-CCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECC-HHHHHHHHHHHHhcCCCC
Confidence 999999999999 999999999998776666667899999999999964443345777765 889999888887788899
Q ss_pred CHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHH
Q psy12791 241 SPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRI 320 (393)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
++..++++.++++++..+++++.+++..+.++|+.+|.+.+|.||++++.++|.++.+.+.++|++++|.++++.+.+.+
T Consensus 245 s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~ 324 (398)
T PRK08249 245 DPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKR 324 (398)
T ss_pred CHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999767788999
Q ss_pred HHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 321 FLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 321 ~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
|+++|+.+..+.|+|+.+|++++|..++|..++.+.+...|++++.||||+|.|+.|+++++|.+||+.+.
T Consensus 325 f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~~ 395 (398)
T PRK08249 325 LLPKLRYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGIEDTEDLIADLEQAFAHLE 395 (398)
T ss_pred HHHhCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998753
No 8
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.4e-55 Score=414.68 Aligned_cols=376 Identities=50% Similarity=0.800 Sum_probs=341.8
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHHH
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAVT 88 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al~ 88 (393)
++.|.++|+|..++... +++.+|++++++|....... ...+.|+|+++|...+|++++|+++|.+.+++++||+.++.
T Consensus 2 ~~~t~~~~~~~~~~~~~-~~~~~pi~~~~~~~~~~~~~-~~~~~y~r~~~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~ 79 (377)
T PRK07671 2 RAKTKLIHGGIIGDPST-GAVSVPIYQVSTYKQEAVGK-HQGYEYSRTGNPTRAALEELIAVLEGGHAGFAFGSGMAAIT 79 (377)
T ss_pred CcccceeeCCCCCCCCC-CCccCCccCCcceecCCCCC-cCCCCcCCCCChHHHHHHHHHHHHhCCCceEEeCCHHHHHH
Confidence 45788999996654333 47788999999997655433 34578999999999999999999999999999999998874
Q ss_pred HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHH
Q psy12791 89 AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAV 168 (393)
Q Consensus 89 ~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l 168 (393)
++..++++||+|++++|+|++++..+...++..|++++.++..|+++++++++++|++|++++|+||||.+.|+++|.++
T Consensus 80 ~~~~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~l 159 (377)
T PRK07671 80 AVMMLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTI 159 (377)
T ss_pred HHHHHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHH
Confidence 45567899999999999999887777777788999999999889999999999999999999999999999999999999
Q ss_pred HHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHH
Q psy12791 169 VKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLV 248 (393)
Q Consensus 169 ~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (393)
|+++ |+++|+|++|..+....+...+.|+++.|+||+++|+.+...|+++++++++.++++..+...+...++.+++++
T Consensus 160 a~~~-g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~ 238 (377)
T PRK07671 160 AKEK-GLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLL 238 (377)
T ss_pred HHHc-CCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHH
Confidence 9999 999999999988766677778899999999999987877778988887788999998888888999999999999
Q ss_pred HhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc
Q psy12791 249 TRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF 328 (393)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (393)
+++++++..|++++.+|+..+.+||+.+|.+.++.+|++++.+.+.++.+++.++|++++|.+ ++.+.+.+|+++++.+
T Consensus 239 ~~~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~-~~~~~~~~f~~~l~l~ 317 (377)
T PRK07671 239 LRGLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV-GSEETANKVLERLQYF 317 (377)
T ss_pred HcCcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe-CCHHHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999 6888999999999999
Q ss_pred ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 329 RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 329 ~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
..+.|+|+.+|++++|..++|..++.+....+|++++.||||+|.|+.++++++|.+||+
T Consensus 318 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 377 (377)
T PRK07671 318 TLAESLGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGIEDGEDLIEDLAQALA 377 (377)
T ss_pred eEccCCCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 999999999999999999999999988888999999999999999999999999999984
No 9
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=1.1e-55 Score=420.98 Aligned_cols=379 Identities=34% Similarity=0.558 Sum_probs=334.1
Q ss_pred CCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-----------------CCCCccccCCCCchHHHHHHHHHH
Q psy12791 8 TAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-----------------PPQGFEYSRSNNPTRRNLERCIAS 70 (393)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-----------------~~~~~~y~~~~~~~~~~lr~~la~ 70 (393)
.++.|.++|.|..+.... ++..+|++.+++|.....+. ....+.|+||++|....|+++||+
T Consensus 16 ~~~~t~~~~~~~~~~~~~-~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~Pt~~~Le~~lA~ 94 (427)
T PRK07049 16 LHPETQMLNYGYDPELSE-GAVKPPVFLTSTFVFRSAEDGRDFFDYVSGRKEPPAGEGAGLVYSRFNHPNSEIVEDRLAV 94 (427)
T ss_pred CCcccceeeCCCCCCCCC-CCccCCccCccceecCChHHHHhhhhccccccccccccccCccccCCCCcCHHHHHHHHHH
Confidence 457889999996543322 47789999999997644221 022477999999999999999999
Q ss_pred HhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC-CCHHHHHhhcC-----CC
Q psy12791 71 LEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL-RKIENLIKYIK-----PN 143 (393)
Q Consensus 71 ~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~-~d~~~l~~~l~-----~~ 143 (393)
++|.++++++++|++|+ .++.+++++||+|+++.|.|+.+.......++..|++++.++. .|++++++.+. ++
T Consensus 95 leg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~ 174 (427)
T PRK07049 95 YEGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGR 174 (427)
T ss_pred HhCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCC
Confidence 99999999999999998 7788899999999999999998655555556778998666653 46777776553 46
Q ss_pred CcEEEEecCCCCcccccCHHHHHHHHHh------CCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEE
Q psy12791 144 TKMVWIENPTNPLMTVFDVKAISAVVKQ------HPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGA 217 (393)
Q Consensus 144 ~~~v~l~~p~nptG~~~~~~~l~~l~~~------~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~ 217 (393)
+++|++++|+||||.++|+++|.++++. + ++++|+||+|..+....++..++|+++.|+||+++|++|+|+||
T Consensus 175 tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~-~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~G~ 253 (427)
T PRK07049 175 VSLILIETPANPTNSLVDVAAVRRVADAIEARQGH-RPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGA 253 (427)
T ss_pred ceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccC-CCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEEEE
Confidence 9999999999999999999999999988 7 89999999998877667777789999999999997799999999
Q ss_pred EEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCC--CCCcchHH
Q psy12791 218 TVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGL--PSHPNHEL 295 (393)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l--~~~~~~~~ 295 (393)
++++ +++.+.++..+..++...++..++++.+.++++..|++++.+++..+.++|+.+|.+.+|.+|++ ++.+.+.+
T Consensus 254 vv~~-~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~ 332 (427)
T PRK07049 254 VLGR-KALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAV 332 (427)
T ss_pred EECC-HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHH
Confidence 9987 88999998888888999999999999999999999999999999999999999999999999985 89999999
Q ss_pred HhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCC
Q psy12791 296 AKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEG 375 (393)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~ 375 (393)
+.+.+.++|++++|.++++.+.+.+|+++++.+..+.|+|+++|++++|..++|..++.+.....|+.++.||||+|.|+
T Consensus 333 ~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~ 412 (427)
T PRK07049 333 YKRQCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGIEH 412 (427)
T ss_pred HHhhCCCCccEEEEEEcCCHHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCcCC
Confidence 99999999999999997677889999999999999999999999999999999999999888899999999999999999
Q ss_pred hHHHHHHHHHHHHH
Q psy12791 376 YTDLIADLDQALRK 389 (393)
Q Consensus 376 ~~~~i~~l~~al~~ 389 (393)
.|+++++|.+||++
T Consensus 413 ~~dl~~dl~~al~~ 426 (427)
T PRK07049 413 PDDLIADLAQALDA 426 (427)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999974
No 10
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.2e-55 Score=415.40 Aligned_cols=382 Identities=46% Similarity=0.751 Sum_probs=342.5
Q ss_pred CCCCCCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEec
Q psy12791 2 SFLPQDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYS 81 (393)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~ 81 (393)
+---++.++.|.++|+|..++... ++..+|+.++++|..+..+.....+.|+|+++|...+|++++|+++|.+.+++++
T Consensus 5 ~~~~~~~~~~t~~~~~~~~~~~~~-~~~~~pi~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~lA~~~g~~~~i~~~ 83 (388)
T PRK07811 5 SDHHANQGFATRAIHAGYEPDPAT-GAVNPPIYASSTFAQDGVGGLRGGYEYARTGNPTRTALEEQLAALEGGAYGRAFS 83 (388)
T ss_pred hcccCCCCcccceeeCCCCCCCCC-CCccCCccCCcceecCCcccccCCCcccCCCCccHHHHHHHHHHHhCCCceEEeC
Confidence 333455668899999997654433 4778899999999877655433457899999999999999999999999999999
Q ss_pred cHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccccc
Q psy12791 82 SGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 82 ~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 160 (393)
+|+.++ .++.+++++||+|++++|+|++++..+...++..|++++.++..|++++++.+.+++++|++++|+||||.+.
T Consensus 84 sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i~~~tklV~ie~p~NPtg~~~ 163 (388)
T PRK07811 84 SGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAITPRTKLIWVETPTNPLLSIT 163 (388)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhcCcCCeEEEEECCCCCcceec
Confidence 999888 7777889999999999999998877777777788999999998899999999998999999999999999999
Q ss_pred CHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCC
Q psy12791 161 DVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVP 240 (393)
Q Consensus 161 ~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 240 (393)
++++|.++|+++ |+++|+|++|+.+....++..+.|+++.|++|+++|+.+.++||++++++++.++++..+...+...
T Consensus 164 dl~~I~~la~~~-gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~ 242 (388)
T PRK07811 164 DIAALAELAHDA-GAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVP 242 (388)
T ss_pred CHHHHHHHHHHc-CCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCC
Confidence 999999999999 9999999999987766777778999999999999877778899999877888888887777778888
Q ss_pred CHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHH
Q psy12791 241 SPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRI 320 (393)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
++.+++++.++++++..|+++..+|+..+.++|+.+|.+..|.+|++++++.|.++.+.+.|+|++++|.++++.+.+.+
T Consensus 243 s~~~a~l~~~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~ 322 (388)
T PRK07811 243 GPFDAYLTLRGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARD 322 (388)
T ss_pred CHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999767888999
Q ss_pred HHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 321 FLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 321 ~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
|+++++.+..+.++|+++|++++|..+.|..++.+ ..|++++.||||+|.|+.++++++|.+||+
T Consensus 323 f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~gi~~~liR~svGlE~~~dl~~dl~~al~ 387 (388)
T PRK07811 323 FCARTKVFTLAESLGGVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLADLEQALG 387 (388)
T ss_pred HHHhCCcceeeccCCCCcceEeCCcccCcccCCHh---hcCCCCCEEEEEeCCCCHHHHHHHHHHHhh
Confidence 99999999999999999999999999998887744 358889999999999999999999999986
No 11
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=2.9e-55 Score=412.65 Aligned_cols=378 Identities=49% Similarity=0.801 Sum_probs=344.0
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHHH
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAVT 88 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al~ 88 (393)
+++|.++|+|..++... ++..+|++++++|....... ...+.|+|+++|....|++++|++.|.+.+++++||++++.
T Consensus 2 ~~~t~~~~~~~~~~~~~-~~~~~pi~~~~~~~~~~~~~-~~~~~y~r~~~p~~~~Le~~la~l~g~~~al~~~SG~~Al~ 79 (380)
T PRK06176 2 RMQTKLIHGGISEDTTT-GAVSVPIYQTSTYRQDAIGR-PKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIH 79 (380)
T ss_pred CccceeeECCCCCCCCC-CCccCCcccCCceecCCCCC-cCCCcccCCCChhHHHHHHHHHHHhCCCCEEEECCHHHHHH
Confidence 46788899996654433 57889999999997665433 34588999999999999999999999999999999999985
Q ss_pred HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHH
Q psy12791 89 AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAV 168 (393)
Q Consensus 89 ~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l 168 (393)
+++.++++||+|+++++.|++++..+...++..|+++++++..|++++++++++++++|++++|+||||.+.|+++|.++
T Consensus 80 ~~l~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~l 159 (380)
T PRK06176 80 AVFSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASV 159 (380)
T ss_pred HHHHHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHH
Confidence 55567899999999999999988888888889999999999989999999999899999999999999999999999999
Q ss_pred HHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHH
Q psy12791 169 VKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLV 248 (393)
Q Consensus 169 ~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (393)
|+++ |+++|+|++|+.++...+...+.|+++.|++|+++|+.+..+|+++++++++.++++..+...|...++.+++++
T Consensus 160 a~~~-gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~ 238 (380)
T PRK06176 160 AKDH-GLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLL 238 (380)
T ss_pred HHHc-CCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 9999 999999999998777778888999999999999987777789999987678888888888877888899999999
Q ss_pred HhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc
Q psy12791 249 TRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF 328 (393)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (393)
.++++++..|++++.+++.++.+||+.+|.+.++.+|++++.+.|.++.+.+.++|++++|.++ +.+.+.+|+++|+.+
T Consensus 239 ~~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~-~~~~~~~f~~~l~~~ 317 (380)
T PRK06176 239 QRGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLK-NDSEAVAFVESLKLF 317 (380)
T ss_pred HhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-CHHHHHHHHHcCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999995 578899999999999
Q ss_pred ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 329 RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 329 ~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..+.++|+++|++++|..++|..++.+.....|++++.||||+|.|+.|+++++|.+||+++
T Consensus 318 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~Al~~~ 379 (380)
T PRK06176 318 ILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKI 379 (380)
T ss_pred eEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999989899999999999999999999999999999865
No 12
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=4.4e-55 Score=411.63 Aligned_cols=374 Identities=36% Similarity=0.587 Sum_probs=336.8
Q ss_pred CCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH
Q psy12791 8 TAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV 87 (393)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al 87 (393)
+|++|.++|.|.+ +.. ++..+|++++++|..... ..+.|+|..+|...+|++++|+++|.+.++++++|++++
T Consensus 1 ~~~~t~~~~~~~~--~~~-~~~~~pi~~~~~~~~~~~----~~~~y~r~~~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai 73 (376)
T PRK06460 1 MKDATRTVREDID--EAT-GAITTPIYQTTAYHYPEG----EKYRYSREANPTVLELTKKIVELENAEMGVAFSSGMGAI 73 (376)
T ss_pred CCcceeeeecCCC--CCC-CCccCCccCCcceeeCCC----CCcceeCCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHH
Confidence 4678999999852 212 467899999999976553 258899999999999999999999999899999999888
Q ss_pred -HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHH
Q psy12791 88 -TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAIS 166 (393)
Q Consensus 88 -~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~ 166 (393)
.++.+++++||+|+++.+.|++++..+...++..|++++.++.++.+.+++.+.+++++|++++|+||||.++|+++|.
T Consensus 74 ~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~ 153 (376)
T PRK06460 74 STTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNIIEKAKSKRYDVVFVENITNPLLRVVDITELS 153 (376)
T ss_pred HHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHH
Confidence 6777889999999999999998888888888999999999988776666666677899999999999999999999999
Q ss_pred HHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHH
Q psy12791 167 AVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCW 246 (393)
Q Consensus 167 ~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
++|+++ |+++|+|++|+.+....++..++|++++|+||+++|+.|+|+||++++ +++++.++..+..++...++..++
T Consensus 154 ~la~~~-g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~-~~l~~~l~~~~~~~g~~~~~~~a~ 231 (376)
T PRK06460 154 KVCKEN-GSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGY-GKLLNVIDQMRRTLGTSLDPHAAY 231 (376)
T ss_pred HHHHHc-CCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecC-HHHHHHHHHHHHhcCCCCCHHHHH
Confidence 999999 999999999987655455556789999999999987778899999987 889999988887788888888888
Q ss_pred HHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcC
Q psy12791 247 LVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLL 326 (393)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 326 (393)
.++++++.+..+++++.+++..+.++|+++|.+.++.+|++++.++|.++.+.+.++|++++|.++++.+.+.+|+++++
T Consensus 232 ~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~ 311 (376)
T PRK06460 232 LTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLK 311 (376)
T ss_pred HHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCC
Confidence 88899999999999999999999999999999999999999999999999999999999999999767788999999999
Q ss_pred ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 327 IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 327 ~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.+..+.|+|+++|+..+|..++|..++.+.....|++++.||||+|.|+.|+++++|.+||+++
T Consensus 312 ~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 312 LIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGIEDVNDLIEDLDRALSTL 375 (376)
T ss_pred cceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999998999999999999999999999999999999999875
No 13
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=2.7e-55 Score=411.15 Aligned_cols=377 Identities=32% Similarity=0.514 Sum_probs=331.9
Q ss_pred CCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCC--------CCCCCccccCCCCchHHHHHHHHHHHhCCCcEEE
Q psy12791 8 TAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPG--------QPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLC 79 (393)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~--------~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~ 79 (393)
.++.|.++|.|..++... ++..+|++.+++|..+..+ .....+.|+|+.+|....||+++|++.+.++.++
T Consensus 3 ~~~~t~~~~~~~~~~~~~-~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~ 81 (394)
T PRK09028 3 EKKATKIVSAGRDKKWTK-GVINPPVFRASTVVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGGAGTAL 81 (394)
T ss_pred CCccceeEEcCCCCCCCC-CCccCCeeCCCCcccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCCCcEEE
Confidence 347789999995443322 4678899999998665432 1112477999999999999999999999888999
Q ss_pred eccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccc
Q psy12791 80 YSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMT 158 (393)
Q Consensus 80 ~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 158 (393)
+++|+.|+ .++.+++++||+|+++++.|++++..+...++..|+++..++..+.+++++.+.++||+|++++|+||||.
T Consensus 82 ~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l~~~TklV~lespsNPtg~ 161 (394)
T PRK09028 82 YPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELIRPNTKVLFLESPGSITME 161 (394)
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCc
Confidence 99999998 77788899999999999999988766666677899999999877888899999989999999999999999
Q ss_pred ccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCC
Q psy12791 159 VFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGV 238 (393)
Q Consensus 159 ~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 238 (393)
+.|+++|.++|+++ |+++++|++|+.+..+.|+..|+|+++.|.+||++|+.++.+|+++.+ +++.+.++......|.
T Consensus 162 v~dl~~I~~la~~~-g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~-~~~~~~l~~~~~~~G~ 239 (394)
T PRK09028 162 VQDVPTLSRIAHEH-DIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATAN-EKHWDQLREHSYLMGQ 239 (394)
T ss_pred HHHHHHHHHHHHHc-CCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECC-HHHHHHHHHHHHhcCC
Confidence 99999999999999 999999999999888889999999999999999999999999987765 7787888777777899
Q ss_pred CCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc-CCHHH
Q psy12791 239 VPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN-GGAEE 317 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 317 (393)
..+|.+++++.++++++..|++++.+|+..+++||+++|.|.+|.||++++.++|.++.++++++|++++|.++ ++.+.
T Consensus 240 ~~~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~ 319 (394)
T PRK09028 240 CTSPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKA 319 (394)
T ss_pred CCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996 36788
Q ss_pred HHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 318 TRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 318 ~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.+|+++++.+..+.|+|+++|++.+|..+.+... ....|..++.||||+|.|+.|+++++|.+||++..
T Consensus 320 ~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~~~~~----~~~~~~~~~liR~svGlEd~~dLi~Dl~~Al~~~~ 389 (394)
T PRK09028 320 VTALVEGMQHFKMGFSWGGFESLILGVFGINKLRT----ATNWDFSKPLIRLHIGLEDVDDLIADLEAGFERYN 389 (394)
T ss_pred HHHHHHhCCcceEecccCCCcceeECCCCcCccCc----hhhhcCCCCeEEEEeCcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988876654432 22256667899999999999999999999998654
No 14
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=7.7e-55 Score=411.90 Aligned_cols=383 Identities=43% Similarity=0.684 Sum_probs=346.7
Q ss_pred CCCCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccH
Q psy12791 4 LPQDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSG 83 (393)
Q Consensus 4 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G 83 (393)
|.+..++.|.++|.|..++... ++..+|+..+.++.....+. ...+.|+|..+|...+|++++|+++|.+++++++||
T Consensus 1 ~~~~~~~~t~~~~~~~~~~~~~-~~~~~pi~~~~~~~~~~~~~-~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~sG 78 (390)
T PRK08064 1 MAMSYSIDTLLLHNQYKHDKQT-GAVNVPIYHASTFHQFDFDT-FGKYDYSRSGNPTREALEDIIAELEGGTKGFAFASG 78 (390)
T ss_pred CCCCCCcccceeeCCCCCCCCC-CCccCCcccCcceecCcccc-cCCCcccCCCChhHHHHHHHHHHHhCCCCeEEECCH
Confidence 3456678899999996654333 57788999999987665444 235779999999999999999999999999999999
Q ss_pred HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCH
Q psy12791 84 LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDV 162 (393)
Q Consensus 84 ~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 162 (393)
+.++ .++ .++++||+|+++++.|++++..+...++..|++++.++..|++++++.+++++++|++++|+||||.+.|+
T Consensus 79 ~~ai~~~l-~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~tklV~l~~p~NptG~~~dl 157 (390)
T PRK08064 79 MAAISTAF-LLLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEVAQNIKPNTKLFYVETPSNPLLKVTDI 157 (390)
T ss_pred HHHHHHHH-HHhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCcEeccH
Confidence 9998 445 47899999999999999988888788888999999999989999999999899999999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCH
Q psy12791 163 KAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSP 242 (393)
Q Consensus 163 ~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (393)
++|.++|+++ |+++|+|++|+.+....+...++|+++.|+||+++|+.|+..|+++++++++.++++..+..++...++
T Consensus 158 ~~I~~la~~~-g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~ 236 (390)
T PRK08064 158 RGVVKLAKAI-GCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGV 236 (390)
T ss_pred HHHHHHHHHc-CCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCH
Confidence 9999999999 999999999998776667777899999999999988998889998887788999999888888999999
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHH
Q psy12791 243 FDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFL 322 (393)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
.+++++.++++++..|++++.+++..+.++|+.+|.+.++.+|++++.+.+.++.+++.++|++++|.+. +.+...+|+
T Consensus 237 ~~a~l~~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~-~~~~~~~f~ 315 (390)
T PRK08064 237 QDCWLVLRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ-SEEAVRQFV 315 (390)
T ss_pred HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC-CHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999995 678899999
Q ss_pred HhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 323 ESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 323 ~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
++++.+..+.++|+.+|++++|..+.|...+.+.....|.+++.||+|+|.|++++++++|.+||+++.
T Consensus 316 ~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~~ 384 (390)
T PRK08064 316 SHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYVE 384 (390)
T ss_pred HhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhcc
Confidence 999998899999999999999999999999888888889999999999999999999999999999764
No 15
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=6.8e-55 Score=412.05 Aligned_cols=378 Identities=40% Similarity=0.666 Sum_probs=337.4
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEec
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYS 81 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~ 81 (393)
++.|.++|+|..+++.. .+..+|++++++|.....+. -...+.|+||++|...+|++++|+++|.+.+++++
T Consensus 3 ~~~t~~~~~~~~~~~~~-~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~av~~~ 81 (391)
T TIGR01328 3 TFATRAIHAGYPPKDQF-GALTPPIYQTSTFVFDSCEQGGNRFAGQESGYIYSRLGNPTVSNLEGRIAFLEGTEAAVATS 81 (391)
T ss_pred CcccceeeCCccCCCCC-CCccCCcccCcceecCChHHHHHhhcCCcCCCceeCCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 46789999996654433 47788999999997654321 12357899999999999999999999999999999
Q ss_pred cHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccccc
Q psy12791 82 SGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 82 ~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 160 (393)
||++++ .++.+++++||+|+++.+.|++++..+...+...|+++++++.+|++++++.+++++++|++++|+||+|.+.
T Consensus 82 sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~~~i~~~tklV~le~p~Np~G~v~ 161 (391)
T TIGR01328 82 SGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVKAHIKDNTKIVYFETPANPTMKLI 161 (391)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhhccCCeEEEEECCCCCCCccc
Confidence 999998 7777888999999999999998888888888899999999999999999999998999999999999999999
Q ss_pred CHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCc-eEEEEEecChHHHHHHHHHH--HhcC
Q psy12791 161 DVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDV-VMGATVTNDDSLQARLKFLQ--NSMG 237 (393)
Q Consensus 161 ~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~-r~G~~~~~~~~~~~~~~~~~--~~~~ 237 (393)
|+++|.++|+++ |+++|+|++|+.+....+...++|+++.|++|+++ .+|. ++|+++++ ++++++++... ...|
T Consensus 162 dl~~I~~la~~~-gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lg-g~g~~~gG~v~~~-~~li~~l~~~~~~~~~g 238 (391)
T TIGR01328 162 DMERVCRDAHSQ-GVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIG-GHGDVVAGLICGK-AELLQQIRMVGIKDMTG 238 (391)
T ss_pred CHHHHHHHHHHc-CCEEEEECCCchhccCCchhcCCCEEEcccccccc-CCCCceEEEEEcC-HHHHHHHHHHHHHhCCC
Confidence 999999999999 99999999999877667777889999999999995 4554 46887775 88888887543 2346
Q ss_pred CCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHH
Q psy12791 238 VVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEE 317 (393)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (393)
...++..+++++++++++..+++++.++++.+.++|+.+|.+..+.+|+++++++|.++.+.++++|++++|.++++.+.
T Consensus 239 ~~l~~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~ 318 (391)
T TIGR01328 239 SVISPFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAG 318 (391)
T ss_pred CCCCcHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999767788
Q ss_pred HHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 318 TRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 318 ~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..+|+++++.+..+.++|+++|++++|..++|..++.+.....|++++.||||+|.|+.|+++++|.+||+++
T Consensus 319 ~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 391 (391)
T TIGR01328 319 AKKLLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGLEDADDLIADLKQALDAL 391 (391)
T ss_pred HHHHHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999998888899999999999999999999999999999864
No 16
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=9.5e-55 Score=412.68 Aligned_cols=388 Identities=39% Similarity=0.625 Sum_probs=346.5
Q ss_pred CCCCCCCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhC
Q psy12791 1 MSFLPQDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEE 73 (393)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~ 73 (393)
|.-+-|..+++|.++|+|..+++.. ++..+|+..+++|.....+. -...+.|+|+++|...+|++++|+++|
T Consensus 1 ~~~~~~~~~~~t~~~~~~~~~~~~~-~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g 79 (403)
T PRK07503 1 MRDSHNNTGFSTRAIHHGYDPLDHG-GALVPPVYLTATFAFPTAEYGAECFAGEEEGHFYSRISNPTLALLEQRMASLEG 79 (403)
T ss_pred CCcccCCCCccchheeCCCCCCCCC-CCccCCcccCcceecCChHHHHHhhccccCCceeeCCCCchHHHHHHHHHHHhC
Confidence 5667788889999999997655433 57889999999997654321 123578999999999999999999999
Q ss_pred CCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecC
Q psy12791 74 AKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENP 152 (393)
Q Consensus 74 ~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p 152 (393)
.+++++++||++++ .++..++++||+|+++.+.|+.++..+...++..|++++.++.+|++++++.++++|++|++++|
T Consensus 80 ~~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~le~p 159 (403)
T PRK07503 80 GEAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALKAAISDKTRMVYFETP 159 (403)
T ss_pred CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHHHhcCccCcEEEEeCC
Confidence 99999999999998 67777899999999999999888777777788899999999999999999999889999999999
Q ss_pred CCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH
Q psy12791 153 TNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL 232 (393)
Q Consensus 153 ~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~ 232 (393)
+||||.+.|+++|.++|+++ |+++|+|++|+.+....++..++|+++.|+||+++|+.++|+|+++.+ ++++++++..
T Consensus 160 ~NPtG~~~di~~I~~la~~~-gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~-~~l~~~l~~~ 237 (403)
T PRK07503 160 ANPNMRLVDIAAVAEIAHGA-GAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGG-KALADRIRLE 237 (403)
T ss_pred CCCCCeeeCHHHHHHHHHHc-CCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcC-HHHHHHHHhh
Confidence 99999999999999999999 999999999998776667777899999999999975556889999965 8888888733
Q ss_pred --HHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEE
Q psy12791 233 --QNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFY 310 (393)
Q Consensus 233 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
....+..+++.++++++++++++..+++++.+++..+.++|+.+|.+.++.+|+++.++.|.++.+++.++|++++|.
T Consensus 238 ~~~~~~g~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~ 317 (403)
T PRK07503 238 GLKDMTGAVMSPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFE 317 (403)
T ss_pred hHHhCcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEE
Confidence 445678889999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 311 VNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 311 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
++++.+...+|++.++.+..+.++|+.+|+.++|..+.|..++.+.....|++++.||||+|.|+.|+++++|.+||+++
T Consensus 318 ~~~~~~~~~~~~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~Al~~~ 397 (403)
T PRK07503 318 LKGGIAAGRRFMNALQLFARAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGLEDVADILADLAQALDAC 397 (403)
T ss_pred ECCCHHHHHHHHHhCCcceeecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHH
Confidence 97677888999999999889999999999999999999999998889999999999999999999999999999999876
Q ss_pred h
Q psy12791 391 C 391 (393)
Q Consensus 391 ~ 391 (393)
.
T Consensus 398 ~ 398 (403)
T PRK07503 398 A 398 (403)
T ss_pred H
Confidence 4
No 17
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.5e-54 Score=411.36 Aligned_cols=382 Identities=40% Similarity=0.631 Sum_probs=339.9
Q ss_pred CCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC------C-CCCccccCCCCchHHHHHHHHHHHhCCCcEEE
Q psy12791 7 DTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ------P-PQGFEYSRSNNPTRRNLERCIASLEEAKHGLC 79 (393)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~-~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~ 79 (393)
+.++.|.++|.|..+++.. ++..+|.++++++..+.... . ...+.|+||++|...+|++++|+++|.+++++
T Consensus 6 ~~~~~t~~~~~~~~~~~~~-~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~iA~~~g~~~~l~ 84 (400)
T PRK06234 6 KMGFATKAIHGGHIGDKQF-GSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGEAAVV 84 (400)
T ss_pred cCCccchheECCCCCCCCC-CCccCCcccccceecCChHHHHHhhccCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEE
Confidence 3457899999996544333 46788999999987654321 1 23467999999999999999999999989999
Q ss_pred eccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccc
Q psy12791 80 YSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMT 158 (393)
Q Consensus 80 ~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 158 (393)
+++|+.++ .++.+++++||+|+++.|.|+.++..+...++..|+++++++..|++++++++++++++|++++|+||||.
T Consensus 85 ~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~~i~~~tklI~iesP~NPtG~ 164 (400)
T PRK06234 85 AASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVRNALKANTKVVYLETPANPTLK 164 (400)
T ss_pred EcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHHHHhccCCeEEEEECCCCCCCC
Confidence 99999998 77778899999999999999988887877788899999999999999999999989999999999999999
Q ss_pred ccCHHHHHHHHHhC-CCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCc-eEEEEEecChHHHHHHHHH--HH
Q psy12791 159 VFDVKAISAVVKQH-PDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDV-VMGATVTNDDSLQARLKFL--QN 234 (393)
Q Consensus 159 ~~~~~~l~~l~~~~-~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~-r~G~~~~~~~~~~~~~~~~--~~ 234 (393)
+.|+++|.++|+++ +++++|+|++|+.+....++..++|+++.|+||+++ .+|. ++||++++ ++++++++.. ..
T Consensus 165 v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~-g~g~~~gG~v~~~-~~~~~~l~~~~~~~ 242 (400)
T PRK06234 165 VTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLN-GHGDVIAGFVVGK-EEFINQVKLFGIKD 242 (400)
T ss_pred cCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeecccccc-CCCCceeEEEEec-HHHHHHHHHHHHHH
Confidence 99999999999996 489999999999887777777789999999999995 5564 46999987 7788877643 34
Q ss_pred hcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC
Q psy12791 235 SMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG 314 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
..+...++..++++.++++++..+++++.++++++.++|+.+|.+.++.+|++++.+.+.++.+.+.++|++++|.++++
T Consensus 243 ~~g~~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~ 322 (400)
T PRK06234 243 MTGSVIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG 322 (400)
T ss_pred hcCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc
Confidence 56788899999999999999999999999999999999999999999999999999999999999999999999999766
Q ss_pred HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 315 AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+...+|+++|+.+.++.++|+++|++.+|..++|..++.+.....|++++.||||+|.|+.+++++++.+||+++.
T Consensus 323 ~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~~ 399 (400)
T PRK06234 323 VEEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALDLIV 399 (400)
T ss_pred HHHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHh
Confidence 78889999999999999999999999999999999999999888999999999999999999999999999999763
No 18
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=9.4e-55 Score=406.61 Aligned_cols=378 Identities=33% Similarity=0.556 Sum_probs=334.0
Q ss_pred CCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCC---CCCccccCCCCchHHHHHHHHHHHhCCCcEEEecc
Q psy12791 6 QDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQP---PQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSS 82 (393)
Q Consensus 6 ~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~ 82 (393)
|+.++.|.++|+|..+++.. ++..+|++++++|.....+.. ...+.|+|..+|..+.|++.++.+.+.+++++++|
T Consensus 9 ~~~~~~t~~~~~~~~~~~~~-~~~~~Pi~~sst~~~~~~~~~~~~~~~y~YsR~gnPt~~~Le~~la~le~~~~~v~~sS 87 (395)
T PRK05967 9 EKAGINTRLAHDGNDPGDYH-GFVNPPVVHASTVLFPDAETMATRGQKYTYGTRGTPTTDALCKAIDALEGSAGTILVPS 87 (395)
T ss_pred ccCCcccceeeCCCCCCCCC-CCccCCccCCcceecCChHHhhcccCCCccCCCCChHHHHHHHHHHHHhCCCCEEEECc
Confidence 45568899999996654433 578899999999976553321 23578999999999999999999998889999999
Q ss_pred HHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC
Q psy12791 83 GLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD 161 (393)
Q Consensus 83 G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 161 (393)
|+.|+ .++.+++++||+|+++++.|++++..+...++..|+++.+++..+.+.++++++++||+|++++|+||++.+.|
T Consensus 88 G~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al~~~TklV~lesPsNP~l~v~d 167 (395)
T PRK05967 88 GLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLMRPNTKVVHTEAPGSNTFEMQD 167 (395)
T ss_pred HHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCcHHH
Confidence 99998 77788999999999999999988766667788999999999887778899999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCC
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPS 241 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (393)
+++|.++|+++ |+++++|++|+.+..+.|+..|+|+++.|.+|+++|..++.+|+++.+ +++.+++.......|...+
T Consensus 168 l~~I~~la~~~-g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~-~~~~~~l~~~~~~~G~~~~ 245 (395)
T PRK05967 168 IPAIAEAAHRH-GAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSAN-EKCWPQLLEAHGTLGLCAG 245 (395)
T ss_pred HHHHHHHHHHh-CCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcC-HHHHHHHHHHHHHcCCCCC
Confidence 99999999999 999999999999888899999999999999999999999999988776 7777777766777899999
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC----CHHH
Q psy12791 242 PFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG----GAEE 317 (393)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 317 (393)
|.++++++++++++..|++++.+|+..+++||+.+|.|.+|.||+++++++|.++.+++.++|++++|.+++ +.+.
T Consensus 246 p~da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~ 325 (395)
T PRK05967 246 PDDTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAK 325 (395)
T ss_pred HHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999963 3788
Q ss_pred HHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 318 TRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 318 ~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
+.+|+++++.+..+.++|+.+|+.+++ .+.+ +.....|..++.||||+|.|+.|+++++|.+||+++..
T Consensus 326 ~~~f~~~l~l~~~~~slG~~~sLi~~~-~~~~-----~~~~~~~~~~~liRlSvGlEd~~dLi~Dl~~Al~~~~~ 394 (395)
T PRK05967 326 AHAFLDALEIFGLGYSWGGYESLALHV-KLGD-----RTVAKAPYAGPVIRLQIGLEDVPDLKADLERGFAAASA 394 (395)
T ss_pred HHHHHHhCCcceEccCCCCcceeeeeC-CCCh-----hHhhhccCCCCeEEEEeccCCHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999763 2222 22222466678999999999999999999999997653
No 19
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=7.8e-55 Score=414.65 Aligned_cols=380 Identities=36% Similarity=0.574 Sum_probs=335.5
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEec
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYS 81 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~ 81 (393)
++.|.++|.|..+++.. .+..+|++++++|..+..+. ....+.|+|+++|....|++.+|++.|.+++++++
T Consensus 8 ~~~t~~~~~~~~~~~~~-~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~leg~~~al~~~ 86 (431)
T PRK08248 8 RLETLAIHAGQEIDPTT-GSRAVPIYQTTSYGFRDSEHAANLFSLKEFGNIYTRIMNPTTDVFEKRIAALEGGIGALAVS 86 (431)
T ss_pred CcchhheeCCcCCCCCC-CCccCCeeCCCccccCCHHHHHhhhccccCCceeECCCCchHHHHHHHHHHHhCCCcEEEEC
Confidence 46799999996654433 46788999999997644321 12346799999999999999999999999999999
Q ss_pred cHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccccc
Q psy12791 82 SGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 82 ~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 160 (393)
||++|+ .++..++++||+|+++.+.|++++..+...++..|+++++++..|++++++++++++++|++++|+||||.++
T Consensus 87 sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai~~~tklV~l~sp~NPtG~v~ 166 (431)
T PRK08248 87 SGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAITDKTKALFAETIGNPKGDVL 166 (431)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCccc
Confidence 999998 7788889999999999999999888888888999999999999999999999998999999999999999999
Q ss_pred CHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChH-H--------------
Q psy12791 161 DVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDS-L-------------- 225 (393)
Q Consensus 161 ~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~-~-------------- 225 (393)
|+++|.++|+++ |+++|+|++|+.+....++..++|+++.|++|+++ .+|.++|+++..+.+ .
T Consensus 167 di~~I~~la~~~-gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lg-g~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~ 244 (431)
T PRK08248 167 DIEAVAAIAHEH-GIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIG-GHGTSIGGVIVDSGKFDWKGSGKFPGLTEPD 244 (431)
T ss_pred CHHHHHHHHHHc-CCEEEEeCCCCccccCChhHcCCCEEEEcCccccC-CCCCceEEEEEeCCccccccccccccccCCc
Confidence 999999999999 99999999998766667777899999999999994 677777776653221 1
Q ss_pred ------------------HHHHHHHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCC
Q psy12791 226 ------------------QARLKFLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGL 287 (393)
Q Consensus 226 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l 287 (393)
...........|...+|++++++.++++++..|++++.+++.+++++|+++|.+.++.+|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl 324 (431)
T PRK08248 245 PSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGL 324 (431)
T ss_pred cccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCC
Confidence 11122344567899999999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHhhhc-CCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCe
Q psy12791 288 PSHPNHELAKSQW-SGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNL 366 (393)
Q Consensus 288 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~ 366 (393)
++++.|.++.+.+ .++|++++|.++++.+...+|+++++.+..+.|+|+++|++++|..++|..++.++...+|++++.
T Consensus 325 ~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~l 404 (431)
T PRK08248 325 PSHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGL 404 (431)
T ss_pred CCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCe
Confidence 9999999999988 678999999997677889999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 367 VRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 367 iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
||||+|.|+.|+++++|.+||+++.
T Consensus 405 iRlsvGlEd~~dL~~Dl~~Al~~~~ 429 (431)
T PRK08248 405 VRLSVGTEAIDDILDDLRQAIRQSQ 429 (431)
T ss_pred EEEEeccCCHHHHHHHHHHHHHhhh
Confidence 9999999999999999999998764
No 20
>KOG0053|consensus
Probab=100.00 E-value=5.1e-55 Score=395.09 Aligned_cols=389 Identities=49% Similarity=0.772 Sum_probs=358.5
Q ss_pred CCCCCCCC---CccceeeccCCCCCCCCCCCCCCCCc--cCCeeeeC-CCCCCCC---CccccCCCCchHHHHHHHHHHH
Q psy12791 1 MSFLPQDT---AFATKAVHIGSEPDQWRSQCVIPPII--LSTTFKQN-TPGQPPQ---GFEYSRSNNPTRRNLERCIASL 71 (393)
Q Consensus 1 ~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~p~~--~~~~~~~~-~~~~~~~---~~~y~~~~~~~~~~lr~~la~~ 71 (393)
|+.+..+. +++|.++|.|..++++..++..+|+. .+.+|.+. ....... .+.|+|+++|....+++.++++
T Consensus 10 ~~~~~~~~~~~~~~t~~~~~g~~~~~~~~~~v~~pI~~~~s~tfk~~~~~~~~~~~~~~~~Ysr~~nPt~~~le~~iaal 89 (409)
T KOG0053|consen 10 MKSMESESRLSHLDTNLLHAGQDPEKAIHNAVAPPIYATLSTTFKQDLNEGEHGGNLDGYDYSRSGNPTRDVLESGIAAL 89 (409)
T ss_pred ccccccchhccccchhhhhcccccchhccccccCceecccceeecccCccccccccccccccccCCCCchHHHHHHHHHH
Confidence 34444444 59999999999988873378999998 77777775 2222111 3889999999999999999999
Q ss_pred hCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEe
Q psy12791 72 EEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIE 150 (393)
Q Consensus 72 ~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~ 150 (393)
.|++.+++++||+.|+ .++..++.+|++++.....|++|...+......+|++..+++.++++++++++++++++||++
T Consensus 90 ~ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~~~i~~~t~~V~~E 169 (409)
T KOG0053|consen 90 EGAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKILKAIKENTKAVFLE 169 (409)
T ss_pred hCCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHHHhhccCceEEEEE
Confidence 9999999999999998 888899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH
Q psy12791 151 NPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK 230 (393)
Q Consensus 151 ~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~ 230 (393)
+|.||++.+.|+++|.++|+++ |+++|||++++.++.+.|+.+|+|||+.|.+|+++|...+.+|.++.+.+++.++++
T Consensus 170 SPsNPll~v~DI~~l~~la~~~-g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~ 248 (409)
T KOG0053|consen 170 SPSNPLLKVPDIEKLARLAHKY-GFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLK 248 (409)
T ss_pred CCCCCccccccHHHHHHHHhhC-CCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHH
Confidence 9999999999999999999999 999999999999988999999999999999999999999999999998799999999
Q ss_pred HHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEE
Q psy12791 231 FLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFY 310 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
..+...|+..+|.++++..++++++..|++++.+++..++++|+.+|.++++.+|+++++++|..+.+...+..|.+.+.
T Consensus 249 ~~~~~lg~~~~p~~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~ 328 (409)
T KOG0053|consen 249 FLQEDLGWCEDPFDLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSV 328 (409)
T ss_pred HHHHHhcCCCCHHHHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888766666666
Q ss_pred EcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 311 VNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 311 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+.++.+...+|.++++.+..+.|+|+++|+.++|..++|.. +.++....|+.++.||+|+|.|+.|+++.+|.+||+++
T Consensus 329 ~~~~~~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~~mth~~-~~e~~~~~Gi~~~LVRvSVGiEd~~dL~~d~~~Al~~~ 407 (409)
T KOG0053|consen 329 IFGNEEHAKKFYDALKLFTKAPSLGGNESLAEPPAIMTHAS-ELEEREKFGIDPNLVRVSVGIEDIEDLIKDFQQALEKA 407 (409)
T ss_pred EcCCHHHHHHHHHhhhhhhcccCcCccchhhcchhhhccCC-CHHHHHhcCCCCCcEEEEeccCCHHHHHHHHHHHHHhh
Confidence 65799999999999999999999999999999999999999 99999999999999999999999999999999999876
Q ss_pred h
Q psy12791 391 C 391 (393)
Q Consensus 391 ~ 391 (393)
.
T Consensus 408 ~ 408 (409)
T KOG0053|consen 408 K 408 (409)
T ss_pred c
Confidence 3
No 21
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=8.4e-55 Score=406.39 Aligned_cols=378 Identities=31% Similarity=0.513 Sum_probs=332.1
Q ss_pred CCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCC--------CCCCCccccCCCCchHHHHHHHHHHHhCCCcEE
Q psy12791 7 DTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPG--------QPPQGFEYSRSNNPTRRNLERCIASLEEAKHGL 78 (393)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~--------~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i 78 (393)
++++.|.++|.|..++... .+..+|++.+++|..+..+ .....+.|+|..+|....|+++||++.|.+.++
T Consensus 3 ~~~~~t~~~~~~~~~~~~~-~~v~~pi~~sstf~f~~~~~~~~~~~~~~~~~~~YsR~~nPt~~~le~~la~LEg~~~a~ 81 (395)
T PRK08114 3 DKKLDTQLVNAGRSKKYTQ-GSVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQEAMCELEGGAGCA 81 (395)
T ss_pred CCCcchheEeCCCCCCCCC-CCccCCeeCCCceecCCHHHHHHhhccCcCCCccccCCCChhHHHHHHHHHHHhCCCeEE
Confidence 3558899999996432222 4788999999988654422 101247899999999999999999999999999
Q ss_pred EeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcc
Q psy12791 79 CYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLM 157 (393)
Q Consensus 79 ~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG 157 (393)
+++||+.|+ .++.+++++||+|++++..|++++..+...++.+|+++.+++..|.++++++++++|++|++++|.||+|
T Consensus 82 ~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l~~~l~~~TrlV~~EtpsNp~~ 161 (395)
T PRK08114 82 LYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADIAKLIQPNTKVVFLESPGSITM 161 (395)
T ss_pred EEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCC
Confidence 999999998 7788889999999999999999988887778889999999998899999999999999999999999999
Q ss_pred cccCHHHHHHHHHhC-CCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc
Q psy12791 158 TVFDVKAISAVVKQH-PDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM 236 (393)
Q Consensus 158 ~~~~~~~l~~l~~~~-~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~ 236 (393)
.+.|+++|.++|+++ +|+++++|++++.+..+.|+.+|+|+++.|.+||++|+.++.+|.++.+ +++.+.++......
T Consensus 162 ~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~-~~~~~~l~~~~~~~ 240 (395)
T PRK08114 162 EVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVAN-ARCWEQLRENSYLM 240 (395)
T ss_pred EeecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcC-HHHHHHHHHHHHhc
Confidence 999999999999998 2599999999999888889999999999999999999998989987766 77777777777788
Q ss_pred CCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC--C
Q psy12791 237 GVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG--G 314 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 314 (393)
|...+|++++++.++++++..|++++.+++..+++||+.+|.|.+|.+|+++++++|.++.+++.++|++++|.+++ +
T Consensus 241 G~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~ 320 (395)
T PRK08114 241 GQMVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLT 320 (395)
T ss_pred cCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999975 4
Q ss_pred HHHHHHHHHhcCccccccccCCccccccC--cccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 315 AEETRIFLESLLIFRCAESLGGIESLADL--PAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~g~~~s~~~~--~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.++..+|+++++.+..+.|+|+++|++++ +....+.. +.+ ..+..++.||||+|.|+.|+++++|.+||+++
T Consensus 321 ~~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~-~~~---~~~~~~~liRlSvGlEd~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 321 DEQLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIR-PAG---EVDFTGTLIRLHIGLEDVDDLIADLAAGFARI 394 (395)
T ss_pred HHHHHHHHHhCCcceeecccCCccceeccCCchhhhccC-Chh---HhcCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 78899999999999999999999999974 33333322 222 23455699999999999999999999999865
No 22
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.6e-54 Score=409.02 Aligned_cols=381 Identities=31% Similarity=0.536 Sum_probs=338.3
Q ss_pred CCCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcE
Q psy12791 5 PQDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHG 77 (393)
Q Consensus 5 ~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~ 77 (393)
-+..+++|.++|.|..++. . .+..+|++.+++|.....+. ....+.|+|..+|....|++.+|++.|.+.+
T Consensus 2 ~~~~~~~t~~~~~g~~~~~-~-~~~~~PI~~sst~~f~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~leg~~~a 79 (432)
T PRK06702 2 GESWGKGTICVQGGYTPKN-G-EPRVLPLYQSTTYKYDTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELEGGVGA 79 (432)
T ss_pred CCCCCcchHheeCCCCCCC-C-CCccCCccCCcceecCCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHhCCCcE
Confidence 3556789999999975433 2 47789999999997654321 1335679999899999999999999999999
Q ss_pred EEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-CHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 78 LCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-KIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 78 i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
++++||++|+ .++.+++++||+|+++.++|.+|+..+...+...|+++++++.. |+++++++++++||+|++++|+||
T Consensus 80 v~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~~Tk~I~~e~pgnP 159 (432)
T PRK06702 80 VATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALANDKTKLVYAESLGNP 159 (432)
T ss_pred EEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCcCCeEEEEEcCCCc
Confidence 9999999998 77788899999999999999999888777778899999999985 899999999999999999999999
Q ss_pred cccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecC---------hHHH
Q psy12791 156 LMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTND---------DSLQ 226 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~---------~~~~ 226 (393)
++.+.|+++|.++|+++ |+++|+|++++.+..+.|+..|+||++.|+|||++|..+.-+|.++... +++.
T Consensus 160 ~~~v~Di~~I~~iA~~~-gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~ 238 (432)
T PRK06702 160 AMNVLNFKEFSDAAKEL-EVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELV 238 (432)
T ss_pred cccccCHHHHHHHHHHc-CCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccc
Confidence 99999999999999999 9999999999988888999999999999999999988888787776321 1111
Q ss_pred ---------------------HHHH-HHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeC
Q psy12791 227 ---------------------ARLK-FLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLH 284 (393)
Q Consensus 227 ---------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~ 284 (393)
.+.+ .....+|..+++++++++.++++++..|++++.+|+.++++||+++|.+.++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~y 318 (432)
T PRK06702 239 EPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNY 318 (432)
T ss_pred cccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEEC
Confidence 1111 234456889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcchHHHhhhc-CCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCC
Q psy12791 285 PGLPSHPNHELAKSQW-SGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGIT 363 (393)
Q Consensus 285 ~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~ 363 (393)
|++++.+.|.++.+++ .|+|++++|.++++.+.+.+|+++|+.+..+.++|+++|++.+|..++|..++.+.+...|++
T Consensus 319 Pgl~~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~ 398 (432)
T PRK06702 319 PGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVT 398 (432)
T ss_pred CCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCC
Confidence 9999999999999999 679999999997678889999999999999999999999999999999999999999899999
Q ss_pred CCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 364 DNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 364 ~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
++.||||+|.|+.|+++++|.+||+
T Consensus 399 ~~liRlSvGlEd~eDLi~Dl~~Al~ 423 (432)
T PRK06702 399 SDLIRLSVGIEDVSDIIADLEAALV 423 (432)
T ss_pred CCeEEEEeccCCHHHHHHHHHHHHh
Confidence 9999999999999999999999997
No 23
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=3.5e-54 Score=408.16 Aligned_cols=384 Identities=34% Similarity=0.575 Sum_probs=337.6
Q ss_pred CCCCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCC-------CCCCCccccCCCCchHHHHHHHHHHHhCCCc
Q psy12791 4 LPQDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPG-------QPPQGFEYSRSNNPTRRNLERCIASLEEAKH 76 (393)
Q Consensus 4 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~-------~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~ 76 (393)
|-...++.|.++|.|..+... .+..+|++.+.++.....+ .-...+.|+||++|...+|++++|+++|.+.
T Consensus 5 ~~~~~~~~t~~~~~~~~~~~~--~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~ 82 (398)
T PRK07504 5 MARKWRPATRLVHSGTLRSQF--GETSEALFLTQGFVYDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAED 82 (398)
T ss_pred ccccCCcccceeeCCCCCCCC--CCCcCCeECCCCccCCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCe
Confidence 556677889999999644222 3567889888887654321 1123578999999999999999999999998
Q ss_pred EEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 77 GLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 77 ~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
.+++++|++++ .++..++++||+|+++++.|+++...+...++..|++++.++..|+++++++++++|++|++++|+||
T Consensus 83 ~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~ai~~~tklV~lesp~Np 162 (398)
T PRK07504 83 ARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWEKAVRPNTKVFFLESPTNP 162 (398)
T ss_pred eeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCC
Confidence 88999999998 66777889999999999999987776777777889999999877999999999999999999999999
Q ss_pred cccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceE-EEEEecChHHHHHHHHHHH
Q psy12791 156 LMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVM-GATVTNDDSLQARLKFLQN 234 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~-G~~~~~~~~~~~~~~~~~~ 234 (393)
||.+.|+++|.++|+++ |+++|+|++|+.+....+...++|+++.|+||+++ .+|.++ |+++++++.+.+.++....
T Consensus 163 tG~v~dl~~I~~la~~~-gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~-g~g~~~GG~vv~~~~~i~~~~~~~~~ 240 (398)
T PRK07504 163 TLEVIDIAAVAKIANQA-GAKLVVDNVFATPLFQKPLELGAHIVVYSATKHID-GQGRCLGGVVLSDKAWIEEHLQDYFR 240 (398)
T ss_pred CcEecCHHHHHHHHHHc-CCEEEEECCccccccCCchhhCCCEEEeecccccc-CCccceEEEEEeCcHHHHHHHHHHHH
Confidence 99999999999999999 99999999999877777777889999999999995 567676 5666663334445655555
Q ss_pred hcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC
Q psy12791 235 SMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG 314 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
..|..+++..+++++++++++..|++++.++++.+.++|+.+|.+.+|.||+++++++|.++.+.++++|++++|.++++
T Consensus 241 ~~g~~~s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~ 320 (398)
T PRK07504 241 HTGPSLSPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGG 320 (398)
T ss_pred HhCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCC
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999999767
Q ss_pred HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 315 AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+...+|++.++.+..+.|+|+.+|++.+|..++|..++.+.....|++++.||||+|.|+.|+++++|.+||+++.
T Consensus 321 ~~~~~~~~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~~ 397 (398)
T PRK07504 321 KEAAFRFLNALKIVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGLEDTDDLIEDLAAALKKVR 397 (398)
T ss_pred HHHHHHHHHhCCcceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhhh
Confidence 88899999999999999999999999999999999999999988999999999999999999999999999998764
No 24
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=6.8e-54 Score=403.85 Aligned_cols=376 Identities=40% Similarity=0.673 Sum_probs=339.3
Q ss_pred ccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHHHH
Q psy12791 10 FATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAVTA 89 (393)
Q Consensus 10 ~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al~~ 89 (393)
+.|.++|.|..+.. . .+..+|++.+++|....... ...+.|+|+++|..++|++.+|+++|.++.+++++|++++.+
T Consensus 1 ~~t~~~~~~~~~~~-~-~~~~~pi~~~~~~~~~~~~~-~~~~~Y~r~~~p~~~~le~~la~l~g~~~~l~~~sG~~al~~ 77 (378)
T TIGR01329 1 LSTLLVNTDNKNDP-Y-DASSMPIYQTATFKQPLAIE-NGPYDYTRSGNPTRTALESLLAKLDKADRAFAFSSGMAALDV 77 (378)
T ss_pred CCceeEeCCCCCCC-C-CCcCCCeecCcceecCCccc-cCCCccCCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHH
Confidence 35778899865433 3 46778999999997765433 345889999999999999999999999999999999988844
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHH
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVV 169 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~ 169 (393)
++.++++||+|+++++.|+++...+...++..|+++++++..|++++++++++++++|++++|+||+|.+.|+++|.++|
T Consensus 78 ~l~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la 157 (378)
T TIGR01329 78 ITRLLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMA 157 (378)
T ss_pred HHHHhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHH
Confidence 44578999999999999998776677777889999999999999999999998999999999999999999999999999
Q ss_pred HhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHH
Q psy12791 170 KQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVT 249 (393)
Q Consensus 170 ~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (393)
+++ |+++|+|++++.+....++..++|+++.|++|+++|+.++++|+++++++++.++++..+...|...++.+++++.
T Consensus 158 ~~~-g~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~ 236 (378)
T TIGR01329 158 HAQ-NALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLL 236 (378)
T ss_pred HHc-CCEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHH
Confidence 999 9999999999877766777789999999999999888889999999976778788877777678888999999999
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccc
Q psy12791 250 RGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFR 329 (393)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 329 (393)
++++++..|+++..+++..++++|+.+|.+.++.+|++++.+.+.++.+.+.+++++++|.+ ++.+...+|++.|+.++
T Consensus 237 ~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~~~~~~~~~~~L~~~~ 315 (378)
T TIGR01329 237 RGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GSVALSKRLVEATKLFS 315 (378)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEE-CCHHHHHHHHHhCcCcc
Confidence 99999999999999999999999999999999999999999999999998888999999999 67787999999999999
Q ss_pred cccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 330 CAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 330 ~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+++++|+++|++++|..++|..++.+.....|++++.||||+|.|+.|+++++|.+||+++
T Consensus 316 i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 376 (378)
T TIGR01329 316 ITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFVTA 376 (378)
T ss_pred cccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998888899999999999999999999999999999865
No 25
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=7.6e-54 Score=403.73 Aligned_cols=376 Identities=41% Similarity=0.629 Sum_probs=333.8
Q ss_pred ccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCC---CCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHH
Q psy12791 10 FATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQP---PQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGA 86 (393)
Q Consensus 10 ~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~a 86 (393)
-+|.++|+|..++. . .+..+|++.+++|.....+.. ...+.|+|+++|...+|++++|+++|.++++++++|++|
T Consensus 3 ~~t~~~~~~~~~~~-~-~~~~~pi~~~st~~~~~~~~~~~~~~~~~y~r~~np~~~~lE~~lA~l~g~~~~l~~~sG~~A 80 (385)
T PRK08574 3 RGTDAVRGYRGSDP-Y-GSLQPPIYLTALFRQEGEAYPSDRGFDLKYSREENPTLRPLEEALAKLEGGVDALAFNSGMAA 80 (385)
T ss_pred ccceeeecCCCCCC-C-CCccCCccCCcceecCcchhhcCCcCCceEECCCCccHHHHHHHHHHHhCCCcEEEeCCHHHH
Confidence 45778898855433 2 477899999999976543111 224779999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCC-CCcEEEEecCCCCcccccCHHH
Q psy12791 87 V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKA 164 (393)
Q Consensus 87 l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~ 164 (393)
+ .++.+++++||+|+++.+.|+++...+.. ++..|++++.++. |++++++++.+ ++++|++++|+||||.++|+++
T Consensus 81 i~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~-~~~~g~~v~~~~~-d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~ 158 (385)
T PRK08574 81 ISTLFFSLLKAGDRVVLPMEAYGTTLRLLKS-LEKFGVKVVLAYP-STEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPE 158 (385)
T ss_pred HHHHHHHHhCCCCEEEEcCCCchhHHHHHHH-hhccCcEEEEECC-CHHHHHHhcCccCceEEEEECCCCCCCEecCHHH
Confidence 8 77778899999999999999987665554 3778999988765 68899999987 8999999999999999999999
Q ss_pred HHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHH
Q psy12791 165 ISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFD 244 (393)
Q Consensus 165 l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (393)
|.++|+++ |+++|+|++|+.+....++..++|+++.|+||+++|+.+..+|+++++++++.++++..+...|...++.+
T Consensus 159 I~~la~~~-gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~ 237 (385)
T PRK08574 159 VAKAAKEL-GAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFE 237 (385)
T ss_pred HHHHHHHc-CCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHH
Confidence 99999999 99999999998877666777889999999999997666556787777668898988877777888899999
Q ss_pred HHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcC--CCcceEEEEEcCCHHHHHHHH
Q psy12791 245 CWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWS--GTSGMLSFYVNGGAEETRIFL 322 (393)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 322 (393)
+++++++++++..|++++.+++..+.++|+.+|.+.+|.+|++++.+.|.++.+++. ++|++++|+++++.+.+.+|+
T Consensus 238 a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~ 317 (385)
T PRK08574 238 AYLVLRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAVLKFL 317 (385)
T ss_pred HHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999885 689999999976788999999
Q ss_pred HhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 323 ESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 323 ~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
++|+.+..+.++|+.+|++++|..++|..++.+.....|++++.||||+|.|+.|+++++|.+||+++
T Consensus 318 ~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~ 385 (385)
T PRK08574 318 RSLKLIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGLEDVEDLIEDLDQALGSI 385 (385)
T ss_pred HcCCcceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999764
No 26
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=4.6e-54 Score=409.47 Aligned_cols=381 Identities=38% Similarity=0.698 Sum_probs=341.8
Q ss_pred CCCCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccH
Q psy12791 4 LPQDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSG 83 (393)
Q Consensus 4 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G 83 (393)
.++.+.++|.++|+|..++. . ++..+|++.+++|....... ...+.|+|+++|..+.+++.+|++.+.+.++++++|
T Consensus 81 ~~~~~~~~t~~~~~~~~~~~-~-~~~~~Pi~~sst~~~~~~~~-~~~~~Y~r~gnpt~~aLE~~lA~leg~e~ai~~~SG 157 (464)
T PLN02509 81 IKEEASVSTLLVNLDNKFDP-F-DAMSTPLYQTATFKQPSAIE-NGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSG 157 (464)
T ss_pred cccCCCcchHheeCCCCCCC-C-CCccCCccccceecCccccc-cCCCccCCCCCHHHHHHHHHHHHHhCCCEEEEeCcH
Confidence 34567789999999965532 2 47788999999986644322 235789999999999999999999998889999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHH
Q psy12791 84 LGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVK 163 (393)
Q Consensus 84 ~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 163 (393)
++++.++..++++||+|+++++.|+++...+...+...|++++.++..|++++++++.+++++|++++|+||+|.+.|++
T Consensus 158 ~aAi~~il~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~ 237 (464)
T PLN02509 158 MAALSAVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVAAAIGPQTKLVWLESPTNPRQQISDIR 237 (464)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHH
Confidence 98885555678999999999999998766666667788999999998899999999998999999999999999999999
Q ss_pred HHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHH
Q psy12791 164 AISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPF 243 (393)
Q Consensus 164 ~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (393)
+|.++|+++ |+++|+|++|+.+....+...++|+++.|++|+++|+.++.+|+++++++.+.++++..+...+...++.
T Consensus 238 ~I~~lAk~~-g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~ 316 (464)
T PLN02509 238 KIAEMAHAQ-GALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPF 316 (464)
T ss_pred HHHHHHHHc-CCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHH
Confidence 999999999 9999999999988777777789999999999999888888899999876777777776666667778999
Q ss_pred HHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHH
Q psy12791 244 DCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLE 323 (393)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
++++.+++++++..|++++.++++.++++|+++|.|++|.||+++++++|.++.+++.++|++++|.+ ++.+.+.+|++
T Consensus 317 ~A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~-~~~~~~~~f~~ 395 (464)
T PLN02509 317 DCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT-GSVALSKHLVE 395 (464)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe-CCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 67888999999
Q ss_pred hcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 324 SLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 324 ~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
+++.+..+.++|+++|++++|..++|..++.+.....|++++.||||+|.|+.|+++++|.+||+.
T Consensus 396 ~l~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGlE~~~DLi~Dl~~Al~~ 461 (464)
T PLN02509 396 TTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFRT 461 (464)
T ss_pred cCCcceEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999999999999999999999999999999974
No 27
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.5e-55 Score=381.89 Aligned_cols=382 Identities=38% Similarity=0.615 Sum_probs=344.0
Q ss_pred CCCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC------C-CCCccccCCCCchHHHHHHHHHHHhCCCcE
Q psy12791 5 PQDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ------P-PQGFEYSRSNNPTRRNLERCIASLEEAKHG 77 (393)
Q Consensus 5 ~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~-~~~~~y~~~~~~~~~~lr~~la~~~~~~~~ 77 (393)
.+..+|+|.++|+|.. +... ++...|++.+++|..+..+. + ..++.|+|..+|....|++++|.+.|.-..
T Consensus 3 ~~~~~f~T~~vHag~~-d~~t-~ara~PIyqtTsy~F~d~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa 80 (426)
T COG2873 3 SANWGFETLAVHAGQE-DPTT-GARAVPIYQTTSYVFDDTDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAA 80 (426)
T ss_pred ccccCcchhhhcCCCC-CCCC-CceecceeeeeeeecCCHHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcchhh
Confidence 4567899999999999 4443 68999999999998765432 2 237889999999999999999999998899
Q ss_pred EEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCc
Q psy12791 78 LCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPL 156 (393)
Q Consensus 78 i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt 156 (393)
+.+.||+.|+ .++..++++||+|+.++.-|++++..+...++++|+++++++.+|++.++++++++||+||++...||.
T Consensus 81 ~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~nTkavf~EtigNP~ 160 (426)
T COG2873 81 LAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDENTKAVFAETIGNPG 160 (426)
T ss_pred hhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCcccceEEEEeccCCC
Confidence 9999999998 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecC--------------
Q psy12791 157 MTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTND-------------- 222 (393)
Q Consensus 157 G~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~-------------- 222 (393)
+.+.|++.|.++|+++ |+++|||++++.+++..|++.|+|||+.|.+||.+|..--.+|.++-..
T Consensus 161 ~~v~Die~ia~iAh~~-gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~ 239 (426)
T COG2873 161 LDVLDIEAIAEIAHRH-GVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFT 239 (426)
T ss_pred ccccCHHHHHHHHHHc-CCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccC
Confidence 9999999999999999 9999999999999999999999999999999999765554555555210
Q ss_pred -----------------hHHHHHHH-HHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeC
Q psy12791 223 -----------------DSLQARLK-FLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLH 284 (393)
Q Consensus 223 -----------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~ 284 (393)
..++-+.+ ......|...+|+.+++.+.+++++..|++++.+|+.++++||+.+|.|.+|+|
T Consensus 240 ~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~Y 319 (426)
T COG2873 240 TPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNY 319 (426)
T ss_pred CCCccccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeec
Confidence 01111111 222357899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcchHHHhhhc-CCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCC
Q psy12791 285 PGLPSHPNHELAKSQW-SGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGIT 363 (393)
Q Consensus 285 ~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~ 363 (393)
|+|++++.|....+.. +++|++++|.+++..+...+|++.|+.+......|.+.|+..+|++++|..+..++..++|+.
T Consensus 320 pgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~ 399 (426)
T COG2873 320 PGLASHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVT 399 (426)
T ss_pred CCCCCCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCC
Confidence 9999999999998765 578999999998888999999999999988999999999999999999999999999999999
Q ss_pred CCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 364 DNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 364 ~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
++.||+|+|.|+.++++++|.+||++
T Consensus 400 ~~~IRlSVGIEd~~DiiaDl~qAl~~ 425 (426)
T COG2873 400 PDLIRLSVGIEDIDDIIADLEQALEA 425 (426)
T ss_pred CCcEEEEeccCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999975
No 28
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=9.9e-54 Score=404.92 Aligned_cols=381 Identities=33% Similarity=0.544 Sum_probs=337.7
Q ss_pred CCCCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCc
Q psy12791 4 LPQDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKH 76 (393)
Q Consensus 4 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~ 76 (393)
+..+.++.|.++|+|..++. . .+..+|+.++++|.....+. -...+.|+||++|...+|++++|++.|.++
T Consensus 10 ~~~~~~~~t~~~~~~~~~~~-~-~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~ 87 (403)
T PRK07810 10 LPDGVSQATIGVRGGLLRSG-F-EETAEALYLTSGYVYESAAAAEAAFTGELDRFVYSRYGNPTVSMFEERLRLIEGAEA 87 (403)
T ss_pred ccccCCcchhheeCCCCCCC-C-CCccCCccCCCccccCCHHHHHHHhccCcCCcceeCCCCchHHHHHHHHHHHhCCCc
Confidence 44556789999999965433 2 46678999999886543221 123467999999999999999999999999
Q ss_pred EEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 77 GLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 77 ~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
+++++||++|+ .++.+++++||+|+++...|++++..+...++..|+++++++..|++++++++++++++|++++|+||
T Consensus 88 al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~tklV~~esp~Np 167 (403)
T PRK07810 88 CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWEEALSVPTQAVFFETPSNP 167 (403)
T ss_pred EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCceEEEEECCCCC
Confidence 99999999998 77778899999999999999988888888888899999999999999999999999999999999999
Q ss_pred cccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh
Q psy12791 156 LMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS 235 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~ 235 (393)
+|.+.|+++|.++|+++ |+++|+|++|+.+..+.++..++|+++.|++|+++|..+..+|+++++++.+.++++.....
T Consensus 168 tg~v~dl~~I~~la~~~-g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~ 246 (403)
T PRK07810 168 MQSLVDIAAVSELAHAA-GAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRH 246 (403)
T ss_pred CCeecCHHHHHHHHHHc-CCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHH
Confidence 99999999999999999 99999999999887777877899999999999996543344588888744444566666566
Q ss_pred cCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC--
Q psy12791 236 MGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-- 313 (393)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-- 313 (393)
.|..+++.+++++.++++++..|++++.+++.++.++|+.+|.+.+|.+|+++++++|.++.+.+.++|++++|.+++
T Consensus 247 ~g~~~s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~ 326 (403)
T PRK07810 247 TGPALSAFNAWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPE 326 (403)
T ss_pred hCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCC
Confidence 788899999999999999999999999999999999999999999999999999999999999999999999999965
Q ss_pred --CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 314 --GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 314 --~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
+.+.+.+|+++++.+..+.++|+.+|+..+|..++|..++.+.....|++++.+|||+|.|+.++++++|.+||
T Consensus 327 ~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGlE~~~dli~dl~~Al 402 (403)
T PRK07810 327 DAAKKRAFEVLDKLRVIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGLEDTDDLIADLDRAL 402 (403)
T ss_pred CcCHHHHHHHHHhCCceEEeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHhh
Confidence 46888999999999999999999999999999999999998888899999999999999999999999999987
No 29
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=9.2e-54 Score=404.58 Aligned_cols=378 Identities=34% Similarity=0.585 Sum_probs=336.5
Q ss_pred CCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEE
Q psy12791 6 QDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGL 78 (393)
Q Consensus 6 ~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i 78 (393)
+.+++.|.++|+|..++. . .+..+|+++++++....... -...+.|+|+++|...++++.+|+++|.++.+
T Consensus 3 ~~~~~~t~~~~~~~~~~~-~-~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~v 80 (390)
T PRK08133 3 DSLGFDTLAVRAGQLRSP-F-GEHSEALFLTSSFVFESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALEGAEACV 80 (390)
T ss_pred ccCCcchhheeCCCCCCC-C-CCccCCccCCCCcccCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHhCCCcEE
Confidence 345678999999965433 2 46778899998886543211 01246799999999999999999999999999
Q ss_pred EeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcc
Q psy12791 79 CYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLM 157 (393)
Q Consensus 79 ~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG 157 (393)
++++|++|+ .++.+++++||+|+++++.|++++..+...++..|+++++++.+|++++++.+.++|++|++++|+||||
T Consensus 81 ~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~ie~p~NptG 160 (390)
T PRK08133 81 ATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRPNTKLFFLETPSNPLT 160 (390)
T ss_pred EECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCC
Confidence 999999998 7777889999999999999999888787778889999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceE-EEEEecChHHHHHHHHHHHhc
Q psy12791 158 TVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVM-GATVTNDDSLQARLKFLQNSM 236 (393)
Q Consensus 158 ~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~-G~~~~~~~~~~~~~~~~~~~~ 236 (393)
.+.|+++|.++|+++ |+++|+|++|+.+....++..++|+++.|+||+++ .+|.++ |+++++ +++++++.......
T Consensus 161 ~v~dl~~I~~la~~~-gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~-g~g~~~GG~vv~~-~~~~~~~~~~~~~~ 237 (390)
T PRK08133 161 ELADIAALAEIAHAA-GALLVVDNCFCTPALQQPLKLGADVVIHSATKYLD-GQGRVLGGAVVGS-KELMEEVFGFLRTA 237 (390)
T ss_pred CcCCHHHHHHHHHHc-CCEEEEECCCcccccCCchhhCCcEEEeecceeec-CCcceEeEEEEcC-HHHHHHHHHHHHHh
Confidence 999999999999999 99999999998877777777789999999999994 677665 667666 67777777666677
Q ss_pred CCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHH
Q psy12791 237 GVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAE 316 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
+...++..+++++++++++..|++++.+++..+.++|+++|.+.++.+|++++.++|.++.+.+.++|++++|.++++.+
T Consensus 238 g~~~~~~~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~ 317 (390)
T PRK08133 238 GPTLSPFNAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGRE 317 (390)
T ss_pred CCCCCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999976788
Q ss_pred HHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 317 ETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
...+|+++++.+..+.++|+.+|++++|..++|..++.+.....|++++.||||+|.|+.|+++++|.+||+
T Consensus 318 ~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 389 (390)
T PRK08133 318 AAWRVIDATRLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGLEDVADIKADLARGLA 389 (390)
T ss_pred HHHHHHHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHhh
Confidence 899999999999999999999999999999999999999898999999999999999999999999999986
No 30
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=3.3e-53 Score=400.97 Aligned_cols=374 Identities=37% Similarity=0.661 Sum_probs=328.6
Q ss_pred CCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEE
Q psy12791 7 DTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLC 79 (393)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~ 79 (393)
.+++.|.++|.|..+++.. ++..+|++.+++|.....+. -...+.|+||++|...+|++.+|+++|.+++++
T Consensus 3 ~~~~~t~~~~~~~~~~~~~-~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al~ 81 (386)
T PRK06767 3 KKHMETALIHHGYTSEEHK-GSLTPPLFQTSTFTFETAQQGEASFAGVDPSYIYSRLGNPTVKLFEERMAVLEGGEEALA 81 (386)
T ss_pred CCCcccceeeCCCCCCCCC-CCccCCccCccceecCCHHHHHHhhccCcCCccccCCCCcchHHHHHHHHHHhCCCcEEE
Confidence 3458899999996544322 47789999999997655321 123478999999999999999999999999999
Q ss_pred eccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccc
Q psy12791 80 YSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMT 158 (393)
Q Consensus 80 ~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 158 (393)
++||++++ .++.+++++||+|+++.+.|++++..+.......|+++..++..|++++++++.+++++|++++|+||||.
T Consensus 82 ~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~~~i~~~tklV~lesp~NptG~ 161 (386)
T PRK06767 82 FGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIENKIRPNTKLIFVETPINPTMK 161 (386)
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhhCcCceEEEEeCCCCCCce
Confidence 99999998 77778899999999999999988887877777889999988888999999999889999999999999999
Q ss_pred ccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCce-EEEEEecChHHHHHH-HHHHHhc
Q psy12791 159 VFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVV-MGATVTNDDSLQARL-KFLQNSM 236 (393)
Q Consensus 159 ~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r-~G~~~~~~~~~~~~~-~~~~~~~ 236 (393)
+.|+++|.++|+++ |+++|+|++|+.+..+.++..++|+++.|+||+++| +|.+ +|+++++ +++++.+ +......
T Consensus 162 v~dl~~I~~la~~~-g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g-~g~~~gG~v~~~-~~~i~~~~~~~~~~~ 238 (386)
T PRK06767 162 LIDLKQVIRVAKRN-GLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGG-HGDVVAGVTICK-TRALAEKIRPMRKDI 238 (386)
T ss_pred ecCHHHHHHHHHHc-CCEEEEECCCcccccCCchhcCCcEEEecCcceecC-CCCceeEEEEeC-hHHHHHHHHHHHHHh
Confidence 99999999999999 999999999988777777778899999999999964 4545 6999987 5555554 4555667
Q ss_pred CCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHH
Q psy12791 237 GVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAE 316 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
|...+++.++++.++++++..+++++.+++..++++|+++|.+..+.+| ++.++.+.+++.|++++|.++++.+
T Consensus 239 g~~~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~~~gg~vsf~l~~~~~ 312 (386)
T PRK06767 239 GGIMAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMKRGGGVISFSIKGGKE 312 (386)
T ss_pred CCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCCCCCceEEEEEcCCHH
Confidence 7778899999999999999999999999999999999999999999988 5678888888899999999976678
Q ss_pred HHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 317 ETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
...+|+++++.++++.++|+++|++.+|..++|..++.+.+...|++++.||||+|.|+.|+++++|.+||+++
T Consensus 313 ~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 386 (386)
T PRK06767 313 ETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQALKKI 386 (386)
T ss_pred HHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 89999999999999999999999999999999999998999899999999999999999999999999999854
No 31
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.4e-52 Score=398.42 Aligned_cols=383 Identities=36% Similarity=0.575 Sum_probs=334.3
Q ss_pred CCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCC-------CCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEe
Q psy12791 8 TAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPG-------QPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCY 80 (393)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~-------~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~ 80 (393)
.+++|.++|+|..++... .+..+|++.+++|.....+ .....+.|+|+.+|....|++.+|+++|.+.++++
T Consensus 12 ~~~~t~~~~~~~~~~~~~-~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Ysr~~~p~~~~Le~~lA~l~g~~~av~~ 90 (436)
T PRK07812 12 WSFETKQIHAGQTPDPAT-NARALPIYQTTSYTFDDTDHAAALFGLAEPGNIYTRIMNPTQDVVEQRIAALEGGVAALLL 90 (436)
T ss_pred CCcchhheeCCCCCCCCC-CCccCCCcCCCCcccCCHHHHHHhhcCCcCCccccCCCCchHHHHHHHHHHHhCCCeEEEE
Confidence 457899999996544433 4788999999999765422 11234679999999999999999999999999999
Q ss_pred ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC-CCCHHHHHhhcCCCCcEEEEecCCCCccc
Q psy12791 81 SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD-LRKIENLIKYIKPNTKMVWIENPTNPLMT 158 (393)
Q Consensus 81 ~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~-~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 158 (393)
+||+.|+ .++.+++++||+|+++...|++++..+...+...|++++.++ ..|++++++++++++++|++++|+||+|.
T Consensus 91 sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~l~~ai~~~tklV~ie~~sNp~G~ 170 (436)
T PRK07812 91 ASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDAWRAAVRPNTKAFFAETISNPQID 170 (436)
T ss_pred ccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHHHHHhCCCCCeEEEEECCCCCCCe
Confidence 9999998 788888999999999999999988777676778899999996 56899999999999999999999999999
Q ss_pred ccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecCh---------------
Q psy12791 159 VFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDD--------------- 223 (393)
Q Consensus 159 ~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~--------------- 223 (393)
+.|+++|.++|+++ |+++|+|++++.+....++..++|+++.|+||+++|+.+..+|.++.+..
T Consensus 171 v~Dl~~I~~la~~~-gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~ 249 (436)
T PRK07812 171 VLDIPGVAEVAHEA-GVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPD 249 (436)
T ss_pred ecCHHHHHHHHHHc-CCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCC
Confidence 99999999999999 99999999999877777888899999999999997766666666664311
Q ss_pred --------------HHHHHHH-HHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCC
Q psy12791 224 --------------SLQARLK-FLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLP 288 (393)
Q Consensus 224 --------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~ 288 (393)
.+..+++ ......|..+++.++++++++++++..|++++.+++.+++++|+.+|.++++.+|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~ 329 (436)
T PRK07812 250 PSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLP 329 (436)
T ss_pred cccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCC
Confidence 1111122 3344578999999999999999999999999999999999999999999999999999
Q ss_pred CCcchHHHhhhc-CCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeE
Q psy12791 289 SHPNHELAKSQW-SGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLV 367 (393)
Q Consensus 289 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~i 367 (393)
+.+.|.++.+.+ .++|++++|.++++.+.+.+|+++++.+..+.++|+.+|++++|..++|..++.+....+|++++.|
T Consensus 330 s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~li 409 (436)
T PRK07812 330 SSPWYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLV 409 (436)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeE
Confidence 999999999987 7799999999976778899999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 368 RLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 368 Rls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
|||+|.|+.|+++++|.+||+++.+
T Consensus 410 RlSvGlEd~~dli~dl~~Al~~~~~ 434 (436)
T PRK07812 410 RLAVGIEGIDDILADLEAGFAAAKA 434 (436)
T ss_pred EEEeccCCHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999997754
No 32
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.2e-52 Score=399.49 Aligned_cols=380 Identities=35% Similarity=0.570 Sum_probs=329.2
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEec
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYS 81 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~ 81 (393)
++.|.++|.|..+++.. .+..+|++++++|.....+. -...+.|+|+++|...+|+++||++.|.+.+++++
T Consensus 2 ~~~t~~~~~~~~~~~~~-~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~g~~~~l~~s 80 (425)
T PRK06084 2 KLETLAIHAGYSPDPTT-KAVAVPIYQTTSYAFDDTQHGADLFDLKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAVA 80 (425)
T ss_pred CcchhheeCCcCCCCCC-CCccCCEeCCCCcccCCHHHHHHhhccccCCccccCCCCchHHHHHHHHHHHhCCCceeEeh
Confidence 36688899986544332 47788999999997654321 02247899999999999999999999988999999
Q ss_pred cHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccccc
Q psy12791 82 SGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 82 ~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 160 (393)
||+.++ .++.+++++||+|+++.+.|++++..+...+...|+++.+++..|++++++++.+++++|++++|+||||.++
T Consensus 81 sG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~~tklV~lesp~NPtG~v~ 160 (425)
T PRK06084 81 SGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDERTKAVFCESIGNPAGNII 160 (425)
T ss_pred hHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhccCCcEEEEeCCCCCCCeec
Confidence 999998 7778889999999999999998877776666778999999998899999999998999999999999999999
Q ss_pred CHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecCh----HH-----------
Q psy12791 161 DVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDD----SL----------- 225 (393)
Q Consensus 161 ~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~----~~----------- 225 (393)
|+++|.++|+++ ++++|+|++|+.+....++..++|+++.|++|+++|+.+..+|+++.++. ..
T Consensus 161 dl~~I~~la~~~-~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~ 239 (425)
T PRK06084 161 DIQALADAAHRH-GVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPD 239 (425)
T ss_pred CHHHHHHHHHHc-CCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCC
Confidence 999999999999 99999999999887777777899999999999997554444454554321 00
Q ss_pred -----------------H-HHHHHHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCC
Q psy12791 226 -----------------Q-ARLKFLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGL 287 (393)
Q Consensus 226 -----------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l 287 (393)
. +........+|..+++.++++++++++++..|++++.+++..++++|+.+|.+.+|.+|++
T Consensus 240 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l 319 (425)
T PRK06084 240 PSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGL 319 (425)
T ss_pred cccccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 0 0011223457889999999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHhhhcCC-CcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCe
Q psy12791 288 PSHPNHELAKSQWSG-TSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNL 366 (393)
Q Consensus 288 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~ 366 (393)
++++.|.++.+.+.+ +|++++|.++++.+.+.+|+++|+.+..+.++|+++|++++|..++|..++.+.....|++++.
T Consensus 320 ~~~p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~l 399 (425)
T PRK06084 320 PDHPEHELARRYMGGKPASILSFGIKGGQAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDM 399 (425)
T ss_pred CCcccHHHHHHhCCCCcceEEEEEecCCHHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCe
Confidence 999999999999887 8999999997677788999999999999999999999999999999999998888899999999
Q ss_pred EEEEecCCChHHHHHHHHHHHHHh
Q psy12791 367 VRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 367 iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
||||+|.|+.|+++++|.+||++.
T Consensus 400 iR~svGlEd~~dLi~dl~~Al~~~ 423 (425)
T PRK06084 400 VRLSIGIEHIDDIIADLAQALDAS 423 (425)
T ss_pred EEEEeccCCHHHHHHHHHHHHHhh
Confidence 999999999999999999999865
No 33
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=1.2e-52 Score=400.60 Aligned_cols=376 Identities=38% Similarity=0.604 Sum_probs=330.3
Q ss_pred ccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEecc
Q psy12791 10 FATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSS 82 (393)
Q Consensus 10 ~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~ 82 (393)
+.|.++|+|..+++.. .+..+|+.++.+|.....+. ....+.|+|+++|...+|++++|+++|.++++++++
T Consensus 2 ~~t~~~~~~~~~~~~~-~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~ysr~~~p~~~~le~~lA~l~g~~~~v~~~s 80 (418)
T TIGR01326 2 FETLQLHAGQEPDPTT-GSRAVPIYQTTSYVFDSTEHAAALFGLQEAGNIYSRLMNPTTDVLEQRIAALEGGVAALAVAS 80 (418)
T ss_pred ccceeEECCCCCCCCC-CCccCCccCCCCeecCCHHHHHHhhccCcCCceeECCCChhHHHHHHHHHHHhCCCeEEEEcc
Confidence 5688999986554332 46788999998887654321 122367999999999999999999999999999999
Q ss_pred HHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC
Q psy12791 83 GLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD 161 (393)
Q Consensus 83 G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 161 (393)
|+.|+ .++.+++++||+|+++++.|++++..+...++..|++++.++.+|++++++.+.+++++|++++|+||||.+.|
T Consensus 81 G~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~t~~V~le~p~NPtg~v~d 160 (418)
T TIGR01326 81 GQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFEKAIDENTKAVFAETIGNPAINVPD 160 (418)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecC
Confidence 99998 77778899999999999999988888888888999999999988999999999989999999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHH---------------
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQ--------------- 226 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~--------------- 226 (393)
+++|.++|+++ |+++|+|++|+.+....++..++|+++.|+||++ |.+|.|+|+++.+++.+.
T Consensus 161 l~~I~~la~~~-~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l-~g~G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~ 238 (418)
T TIGR01326 161 IEAIAEVAHAH-GVPLIVDNTFATPYLCRPIDHGADIVVHSATKYI-GGHGTAIGGVIVDGGKFDWANGRFPLFTTPDPS 238 (418)
T ss_pred HHHHHHHHHHc-CCEEEEECCCchhhcCCchhcCCeEEEECccccc-cCCccceEEEEEecccccccccccccccCCCCc
Confidence 99999999999 9999999999877666677778999999999999 578999999888632211
Q ss_pred -----------------HHHHHHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCC
Q psy12791 227 -----------------ARLKFLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPS 289 (393)
Q Consensus 227 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~ 289 (393)
+.........|...+|.+++++.++++++..|++++.+++..++++|..+|.|..+.+|++++
T Consensus 239 q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~ 318 (418)
T TIGR01326 239 YHGLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLAS 318 (418)
T ss_pred cccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence 111122334577889999999999999999999999999999999999999999999999999
Q ss_pred CcchHHHhhhc-CCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEE
Q psy12791 290 HPNHELAKSQW-SGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVR 368 (393)
Q Consensus 290 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iR 368 (393)
++.|.++.+.+ .++|++++|.++++.+.+.+|+++++.+..+.|+|+++|++++|..++|..++.+.....|++++.||
T Consensus 319 ~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR 398 (418)
T TIGR01326 319 HPHHALAKKYLPKGFGAVLSFEIKGGREAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIR 398 (418)
T ss_pred CccHHHHHHhccCCCcceEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEE
Confidence 99999999988 68999999999767788899999999999999999999999999999999999888889999999999
Q ss_pred EEecCCChHHHHHHHHHHHH
Q psy12791 369 LSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 369 ls~~~~~~~~~i~~l~~al~ 388 (393)
||+|.|+.++++++|.+||+
T Consensus 399 ~svGlE~~~dl~~dl~~Al~ 418 (418)
T TIGR01326 399 LSVGIENIDDIIADLEQALE 418 (418)
T ss_pred EEecCCCHHHHHHHHHHhhC
Confidence 99999999999999999984
No 34
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.9e-52 Score=396.83 Aligned_cols=384 Identities=34% Similarity=0.562 Sum_probs=332.5
Q ss_pred CCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEE
Q psy12791 7 DTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLC 79 (393)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~ 79 (393)
.+++.|.++|.|..+++.. ++..+|++++++|.....+. -...+.|+|+.+|...++++.+|+++|.+.+++
T Consensus 6 ~~~~~t~~~~~~~~~~~~~-~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~y~R~~~p~~~~le~~lA~l~g~~~av~ 84 (433)
T PRK08134 6 PPGFDTLALHAGAAPDPAT-GARAVPIHLTTSFVFRDSDHAAALFNLERAGHVYSRISNPTVAVLEERVAALEGGVGAIA 84 (433)
T ss_pred CCCcchhheeCCCCCCCCC-CCccCCccCCCccccCCHHHHHHhhcccccCceeecCcChHHHHHHHHHHHHhCCCcEEE
Confidence 3458899999996554433 47788999999997654321 123578999999999999999999999999999
Q ss_pred eccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccc
Q psy12791 80 YSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMT 158 (393)
Q Consensus 80 ~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 158 (393)
++||++|+ .++.+++++||+|+++..+|+++...+...++..|+++++++.+|++++++.++++|++|++++|+||+|.
T Consensus 85 ~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~~~i~~~TklV~~e~~~np~g~ 164 (433)
T PRK08134 85 TASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWRAAIRPNTRLLFGETLGNPGLE 164 (433)
T ss_pred eCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCcccCc
Confidence 99999998 67777899999999999999988777766667899999999998999999999999999999999999999
Q ss_pred ccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecCh---------------
Q psy12791 159 VFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDD--------------- 223 (393)
Q Consensus 159 ~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~--------------- 223 (393)
+.|+++|.++|+++ |+++|+|++++.++.+.++..++|+++.|.+|+++|+.+..+|.++....
T Consensus 165 v~Di~~I~~la~~~-gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~ 243 (433)
T PRK08134 165 VLDIPTVAAIAHEA-GVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEP 243 (433)
T ss_pred ccCHHHHHHHHHHc-CCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCC
Confidence 99999999999999 99999999999888878888899999999999996544444454442210
Q ss_pred ----------------HHHHHHH-HHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCC
Q psy12791 224 ----------------SLQARLK-FLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPG 286 (393)
Q Consensus 224 ----------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~ 286 (393)
.+..+.+ ......|...++.+++++.++++++..|++++.+++.+++++|+.+|.+.++.+|+
T Consensus 244 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~ 323 (433)
T PRK08134 244 YAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPE 323 (433)
T ss_pred cccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCC
Confidence 0001111 12235678899999999999999999999999999999999999999999999999
Q ss_pred CCCCcchHHHhhhc-CCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCC
Q psy12791 287 LPSHPNHELAKSQW-SGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDN 365 (393)
Q Consensus 287 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~ 365 (393)
+++++.|.++.+.+ .++|++++|.++++.+.+.+|+++++.+..+.++|+++|++++|..++|..++.+.....|++++
T Consensus 324 l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~ 403 (433)
T PRK08134 324 LESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEG 403 (433)
T ss_pred CCCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCC
Confidence 99999999999888 68999999999766788999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 366 LVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 366 ~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
.||||+|.|+.|+++++|.+||+++.+
T Consensus 404 liRlsvGlE~~~dli~dl~~Al~~~~~ 430 (433)
T PRK08134 404 TIRLSIGLEDADDLIDDLKRALKAAEK 430 (433)
T ss_pred eEEEEeccCCHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999997653
No 35
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=3.3e-52 Score=393.26 Aligned_cols=371 Identities=36% Similarity=0.599 Sum_probs=330.8
Q ss_pred cceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCC-------CCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccH
Q psy12791 11 ATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPG-------QPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSG 83 (393)
Q Consensus 11 ~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~-------~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G 83 (393)
.|.++|.|..++. . .+..+|++++.++...... .-...+.|+||++|...+|++.+|+++|.++++++++|
T Consensus 1 ~t~~~~~~~~~~~-~-~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~~~~~sG 78 (380)
T TIGR01325 1 ATLAIRGGKERTE-F-REHAEALFLTSSFVYDSAAHAADRFAGEIPGFVYSRYANPTVAAFEERIAALEGAERAVATATG 78 (380)
T ss_pred CceeEECCCCCCC-C-CCccCCeeCCcceecCCHHHHHHhhccccCCcceecCCCchHHHHHHHHHHHhCCCcEEEECCH
Confidence 3667898864433 2 4567889999988654321 00234779999999999999999999999999999999
Q ss_pred HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCH
Q psy12791 84 LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDV 162 (393)
Q Consensus 84 ~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 162 (393)
++++ .++.+++++||+|+++.+.|++++..+...++..|++++.++.+|++++++.+++++++|++++|+||+|.+.|+
T Consensus 79 ~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~le~p~np~g~~~dl 158 (380)
T TIGR01325 79 MSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKPNTKLVFVETPSNPLGELVDI 158 (380)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCeeeCH
Confidence 9998 777788899999999999999988778878888999999999999999999998899999999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCce-EEEEEecChHHHHHHHHHHHhcCCCCC
Q psy12791 163 KAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVV-MGATVTNDDSLQARLKFLQNSMGVVPS 241 (393)
Q Consensus 163 ~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (393)
++|.++|+++ |+++|+|++|+.+....++..++|+++.|+||+++ .+|.+ +|+++++ +++++.++......|...+
T Consensus 159 ~~I~~la~~~-gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~-g~g~~~gG~vv~~-~~~~~~l~~~~~~~g~~~~ 235 (380)
T TIGR01325 159 AALAELAHAI-GALLVVDNVFATPVLQQPLKLGADVVVYSATKHID-GQGRVMGGVIAGS-EELMAEVAVYLRHTGPAMS 235 (380)
T ss_pred HHHHHHHHHc-CCEEEEECCCcccccCCchhhCCCEEEeeccceec-CCCCeEEEEEEeC-HHHHHHHHHHHHhhCCCCC
Confidence 9999999999 99999999999877777777889999999999995 45655 5788876 7788888777667788889
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHH
Q psy12791 242 PFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIF 321 (393)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
+..+++++++++.+..+++++.+++..+.++|+++|.+.+|.+|++++.++|.++.+.+.++|++++|.++ +.+.+.+|
T Consensus 236 p~~a~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~-~~~~~~~f 314 (380)
T TIGR01325 236 PFNAWVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA-DRAAAWKV 314 (380)
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC-CHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999996 78889999
Q ss_pred HHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 322 LESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 322 ~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
+++|+.+..+.++|+++|+..+|..++|..++.+.....|+.++.||||+|.|+.+++++++.+||
T Consensus 315 ~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al 380 (380)
T TIGR01325 315 LDAVELVSITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVGLEDVDDLIADLKRAL 380 (380)
T ss_pred HHcCCcceEcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHhhC
Confidence 999999999999999999999999999999998888899999999999999999999999999885
No 36
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=3.8e-52 Score=390.32 Aligned_cols=371 Identities=32% Similarity=0.530 Sum_probs=323.0
Q ss_pred ceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC---CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-
Q psy12791 12 TKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ---PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV- 87 (393)
Q Consensus 12 ~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~---~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al- 87 (393)
|.++|+|..+++.. ++..+|++++++|....... -...+.|+|.++|....|++++|+++|.+++++++||+.|+
T Consensus 1 t~~~~~~~~~~~~~-~~~~~pi~~~st~~~~~~~~~~~~~~~~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~ 79 (377)
T TIGR01324 1 TRLIHSGRQPRFSQ-GSVNPPLQRASTVLFDSHAAQRRAKGELTYGRRGTLTHFALQDAMCELEGGAGCYLYPSGLAAVT 79 (377)
T ss_pred CeeEECCCCCCCCC-CCccCCeeCCCceeeCChhhhcCCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEECcHHHHHH
Confidence 45788886554332 47789999999997654221 02357899999999999999999999999999999999998
Q ss_pred HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHH
Q psy12791 88 TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISA 167 (393)
Q Consensus 88 ~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~ 167 (393)
.++.+++++||+|+++++.|+++.......++..|+++..++..+.+++++.+.++||+|++++|+||+|.+.|+++|.+
T Consensus 80 ~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~ 159 (377)
T TIGR01324 80 NSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAK 159 (377)
T ss_pred HHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHH
Confidence 77888899999999999999887655555567789999998776668899999999999999999999999999999999
Q ss_pred HHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHH
Q psy12791 168 VVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWL 247 (393)
Q Consensus 168 l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (393)
+|+++ |+++|+|++|+.+....++..++|+++.|++|+++|++++.+|+++++ ++.+++++......|...++.+++.
T Consensus 160 la~~~-g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~-~~~~~~l~~~~~~~G~~l~p~~a~~ 237 (377)
T TIGR01324 160 AARNP-GIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVAN-ARTWDQLREHSYLMGQMVDADDAYT 237 (377)
T ss_pred HHHHc-CCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeC-HHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 99999 999999999999887788889999999999999999999999999887 6777777766667899999999999
Q ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhcC
Q psy12791 248 VTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESLL 326 (393)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 326 (393)
+.++++++..|++++.+++.++++||+.+|.+.++.+|++++.+.+.++.+++.+++++++|.+++ +.+...+|+++|+
T Consensus 238 ~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~ 317 (377)
T TIGR01324 238 TLRGLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQ 317 (377)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999999999999999999999975 6788999999999
Q ss_pred ccccccccCCccccccCcc-cccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 327 IFRCAESLGGIESLADLPA-EMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 327 ~~~~~~~~g~~~s~~~~~~-~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.++++.|+|+++|+..++. .++|.. ....|..++.||||+|.|+.|+++++|.+||+++
T Consensus 318 ~~~~~~slG~~~sl~~~~~~~~~~~~-----~~~~~~~~~liR~svGlE~~~dl~~dl~~al~~~ 377 (377)
T TIGR01324 318 LFGLGYSWGGYESLALCNQPELGHRP-----NIKRNLEGPLIRVHIGLENVDDLKADLKAGFEAI 377 (377)
T ss_pred cceEeccCCCccceeecCCCCCCHHH-----HHhccCCCCEEEEEeCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999986321 333332 2245666789999999999999999999999864
No 37
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=4.7e-52 Score=392.76 Aligned_cols=375 Identities=34% Similarity=0.521 Sum_probs=330.1
Q ss_pred CCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEe
Q psy12791 8 TAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCY 80 (393)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~ 80 (393)
+++.|.++|+|..+++.. ++..+|++++++|.....+. -...+.|+||++|..++|++++|+++|.++.+++
T Consensus 8 ~~~~t~~~~~~~~~~~~~-~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~~ 86 (394)
T PRK07050 8 RALQTRIVQPDDQIPPGF-RSFVTPVARASTVVFPDLATMRALDWRQDVQWRYGLHATPTSLALAQRLAEIEGGRHALLQ 86 (394)
T ss_pred CCccchheECCCCCCCCC-CCccCCeeCCcceecCCHHHHHhhcccccCCcccCCCCCHHHHHHHHHHHHHhCCCeEEEe
Confidence 678899999997654433 47789999999997654321 1235789999999999999999999998888888
Q ss_pred ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 81 SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 81 ~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
++|+.++ .++.+++++||+|++++++|++++..+...++..|++++.++..+.+++++.+.++|++|++++|+||+|.+
T Consensus 87 ~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~~~i~~~tklV~le~p~Np~~~~ 166 (394)
T PRK07050 87 PSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIADLIQPNTRLIWLEAPGSVTMEV 166 (394)
T ss_pred ccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCccH
Confidence 8889998 777788999999999999999887666667788999999998777788999999999999999999999999
Q ss_pred cCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCC
Q psy12791 160 FDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVV 239 (393)
Q Consensus 160 ~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 239 (393)
.++++|.++|+++ |+++|+|++|..+....++..|+|+++.|++|+++|..++++|+++++++++.++++..+...|..
T Consensus 167 ~di~~I~~ia~~~-gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~ 245 (394)
T PRK07050 167 PDVPAITAAARAR-GVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIG 245 (394)
T ss_pred hhHHHHHHHHHHc-CCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 9999999999999 999999999998887788888999999999999988889999999987789999998888878999
Q ss_pred CCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC--CHHH
Q psy12791 240 PSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG--GAEE 317 (393)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 317 (393)
.++.++++++++++++..|++++.+++.++++||+++|.+.++.+|++++.+.+..+.+.+.+++++++|.+++ +.+.
T Consensus 246 ~~~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~ 325 (394)
T PRK07050 246 VSADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQ 325 (394)
T ss_pred CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999998888888899999999965 4688
Q ss_pred HHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 318 TRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 318 ~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..+|++.++.+.++.|+|+++|+.. |..+++.... ..+..++.||||+|.|+.|+++++|.+||.+.
T Consensus 326 ~~~~~~~l~~~~~~~s~G~~~sl~~-~~~~~~~~~~-----~~~~~~~~iR~svGlE~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 326 VDAFVEALELFAIGWSWGGACSLAM-PYDVASMRTA-----KWPHRGTLVRLYIGLEDEADLIADLEQALEAA 392 (394)
T ss_pred HHHHHHcCCCCeeccccCCccceEe-eCcccccchh-----hcCCCCCEEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999987 5554444332 12245699999999999999999999999865
No 38
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=6.9e-52 Score=388.88 Aligned_cols=363 Identities=31% Similarity=0.489 Sum_probs=314.2
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV- 87 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al- 87 (393)
++.|.++|+|...++.. ++..+|+..+++|....... ...+.|+||++|...+|++++|+++ .++++++++|++++
T Consensus 3 ~~~t~~~~~~~~~~~~~-~~~~~pi~~~~~~~~~~~~~-~~~~~y~ry~~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~ 79 (366)
T PRK07582 3 GDGTRSVHAGGPEAVPG-EPVLPGPVFAAPYHLSPGEP-TGPDTYGRASNPTWRALEAALGELE-GAEALVFPSGMAAIT 79 (366)
T ss_pred CcccceeeCCCCCCCCC-CCccCCccccceEEccCccc-cCCceeECCCCccHHHHHHHHHHHc-CCCEEEECCHHHHHH
Confidence 57788999985543322 47788999999997664322 2357799999999999999999999 57899999999998
Q ss_pred HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHH
Q psy12791 88 TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISA 167 (393)
Q Consensus 88 ~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~ 167 (393)
.++.+++++||+|++++|+|+++.......++..|++++.++.++... .+.+++++|++++|+||||.+.|+++|.+
T Consensus 80 ~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~---~~~~~t~lV~le~p~NPtg~v~di~~I~~ 156 (366)
T PRK07582 80 AVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE---AALAGADLVLAETPSNPGLDVCDLAALAA 156 (366)
T ss_pred HHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH---HhccCceEEEEECCCCCCCCccCHHHHHH
Confidence 777788999999999999998765555455677899999999865432 33467999999999999999999999999
Q ss_pred HHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHH
Q psy12791 168 VVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWL 247 (393)
Q Consensus 168 l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (393)
+|+++ |+++|+|++|..+....+++.++|++++|+||+++|++|+|+||++++++++.++++..+...+..++++++++
T Consensus 157 ~a~~~-g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l 235 (366)
T PRK07582 157 AAHAA-GALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWL 235 (366)
T ss_pred HHHHc-CCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 99999 99999999998666667777789999999999999999999999998768899989888888888899999999
Q ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCc
Q psy12791 248 VTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLI 327 (393)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 327 (393)
+.++++++..|++++.+++..++++|+.+|.+..+.+|++++.+.|.++.+.+.++|++++|.++ +.++..+|+++++.
T Consensus 236 ~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~-~~~~~~~~~~~l~~ 314 (366)
T PRK07582 236 AHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA-DAAAAERFVAASRL 314 (366)
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC-CHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999995 78999999999999
Q ss_pred cccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 328 FRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 328 ~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+..+.++|+++|+...+... ..+.+++.||+|+|.|++++++++|.+||+++
T Consensus 315 ~~~~~s~G~~~sl~~~~~~~-----------~~~~~~~liR~svGlE~~~dli~dl~~al~~~ 366 (366)
T PRK07582 315 VVAATSFGGVHTSADRRARW-----------GDAVPEGFVRLSCGIEDTDDLVADLERALDAL 366 (366)
T ss_pred ceecccCCCccchhhhHHHc-----------CCCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 99999999999887543211 12255799999999999999999999999863
No 39
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=7.5e-52 Score=393.51 Aligned_cols=381 Identities=33% Similarity=0.507 Sum_probs=331.2
Q ss_pred CCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEe
Q psy12791 8 TAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCY 80 (393)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~ 80 (393)
.++.|+++|+|..+++.. ++..+|++.+++|..+..+. -...+.|+|..+|....+++.+|+++|.++++++
T Consensus 12 ~~~~t~~~~~~~~~~~~~-~~~~~Pi~~sstf~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~le~~la~l~g~~~~v~f 90 (437)
T PRK05613 12 WGFETRSIHAGQSVDSDT-SARNLPIYQTTSYVFDSAEHAKQRFALEDLGPIYSRLTNPTVEALENRIASLEGGVHAVAF 90 (437)
T ss_pred CCcchHheeCCCCCCCCC-CCccCCEeCCCCcccCCHHHHHHhhccccCCceeeCccChHHHHHHHHHHHHhCCCeEEEe
Confidence 347899999996654433 57889999999997654211 0234779999999999999999999999999999
Q ss_pred ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC-CCCHHHHHhhcCCCCcEEEEecCCCCccc
Q psy12791 81 SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD-LRKIENLIKYIKPNTKMVWIENPTNPLMT 158 (393)
Q Consensus 81 ~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~-~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 158 (393)
+||++|+ .++..++++||+|++++.+|+++...+...++..|+++++++ ..|+++++++++++|++|+++++.||+|.
T Consensus 91 sSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~~tk~V~~e~~~Np~~~ 170 (437)
T PRK05613 91 ASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQPNTKAFFGETFANPQAD 170 (437)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCccCeEEEEECCCCCCCc
Confidence 9999998 777788899999999999999987666677788999999997 45899999999999999999999999999
Q ss_pred ccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecCh---------------
Q psy12791 159 VFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDD--------------- 223 (393)
Q Consensus 159 ~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~--------------- 223 (393)
+.|+++|.++|+++ |+++|+|++++.+....+...|+|+++.|++|+++|.....+|.++.+.+
T Consensus 171 v~di~~I~~la~~~-gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~ 249 (437)
T PRK05613 171 VLDIPAVAEVAHRN-QVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPY 249 (437)
T ss_pred ccCHHHHHHHHHHc-CCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCC
Confidence 99999999999999 99999999998877677777899999999999996554445676664311
Q ss_pred -------------------HHH-HHHHHHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEe
Q psy12791 224 -------------------SLQ-ARLKFLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVL 283 (393)
Q Consensus 224 -------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~ 283 (393)
.+. +........+|...+|++++++.++++++..|++++.+|+.++++||+++|.|.+|.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~ 329 (437)
T PRK05613 250 FVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVN 329 (437)
T ss_pred CCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 001 111234456799999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcchHHHhhhc-CCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCC
Q psy12791 284 HPGLPSHPNHELAKSQW-SGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGI 362 (393)
Q Consensus 284 ~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~ 362 (393)
+|++++.+.|.++.+++ .++|++++|.++++.+.+.+|+++|+.+..+.++|+++|++++|..++|..++.+....+|+
T Consensus 330 yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi 409 (437)
T PRK05613 330 FAGLKDSPWYATKEKLGLKYTGSVLSFDIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGI 409 (437)
T ss_pred CCCCCCCccHHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCC
Confidence 99999999999999885 67899999999767888999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 363 TDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 363 ~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+++.||||+|.|+.|+++++|.+||+++
T Consensus 410 ~~~liRlsvGlE~~~dLi~Dl~~Al~~~ 437 (437)
T PRK05613 410 TQATVRLSVGIEDIDDIIADLEGGFAAI 437 (437)
T ss_pred CCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999853
No 40
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=9.9e-52 Score=389.40 Aligned_cols=360 Identities=51% Similarity=0.860 Sum_probs=327.7
Q ss_pred CCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCe
Q psy12791 28 CVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDH 99 (393)
Q Consensus 28 ~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~ 99 (393)
+..+|++.+++|.....+. -...+.|+|+++|...+|++++|+++|.+++++++||++|+ .++.+++++||+
T Consensus 2 ~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd~ 81 (369)
T cd00614 2 AVAPPIYQTSTFVFPSPAEAADLFALREGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGDH 81 (369)
T ss_pred CcCCCccCCCceecCCHHHHHHhhcCCcCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCCE
Confidence 4567888998887654321 12357899999999999999999999999999999999998 777788999999
Q ss_pred EEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEE
Q psy12791 100 IISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVL 179 (393)
Q Consensus 100 vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~liv 179 (393)
|+++.+.|++++..+...++..|+++..++.+|++++++.+++++++|++++|+||+|.+.|+++|.++|+++ |+++|+
T Consensus 82 Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~-g~~liv 160 (369)
T cd00614 82 VVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEH-GALLVV 160 (369)
T ss_pred EEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc-CCEEEE
Confidence 9999999999887777777889999999999999999999988899999999999999999999999999999 999999
Q ss_pred eCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHHHH
Q psy12791 180 DNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPCRL 259 (393)
Q Consensus 180 Dea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (393)
|++|+.+....++..++|+++.|++|+++|+.++++|++++++++++++++.....+|...++..++++.++++++..++
T Consensus 161 D~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~r~ 240 (369)
T cd00614 161 DNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPLRM 240 (369)
T ss_pred ECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHHHH
Confidence 99999887767777889999999999997666689999999855888988887777888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccc
Q psy12791 260 KEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIES 339 (393)
Q Consensus 260 ~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s 339 (393)
+++.++++.+.++|+.+|.+.++.+|++++.+.+.++.+.+.++++++.|.++++.+.+.+|+++++.+..+.|+|+.+|
T Consensus 241 ~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~s 320 (369)
T cd00614 241 ERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVES 320 (369)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCce
Confidence 99999999999999999999999999999999999999999999999999996578899999999999999999999999
Q ss_pred cccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 340 LADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
++++|..+.|..++.+.....|++++.||||+|.|+.++++++|.+||+
T Consensus 321 l~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGlE~~~dl~~dl~~al~ 369 (369)
T cd00614 321 LVEHPASMTHSQLPPEERAAAGITPGLVRLSVGIEDVEDLIADLEQALK 369 (369)
T ss_pred eeeCCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 9999999999999888888899999999999999999999999999873
No 41
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.8e-51 Score=391.10 Aligned_cols=380 Identities=34% Similarity=0.554 Sum_probs=332.1
Q ss_pred CCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEe
Q psy12791 8 TAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCY 80 (393)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~ 80 (393)
+++.|.++|.|..++... ++..+|+..+++|..+..+. -...+.|+|.++|....|++.+|++.|.+.++++
T Consensus 6 ~~~~t~~~~~~~~~~~~~-~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~al~~ 84 (427)
T PRK05994 6 PGFATLAVHAGAQPDPTT-GARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRITNPTNAVLEERVAALEGGTAALAV 84 (427)
T ss_pred CCcchhheECCcCCCCCC-CCccCCCcCCCCcccCCHHHHHHhhccccCCcceECCCCccHHHHHHHHHHHhCCCcEEEE
Confidence 458899999996554433 46778999999987554321 0123679999999999999999999999999999
Q ss_pred ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 81 SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 81 ~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
+||++|+ .++.+++++||+|+++.++|+++...+...++..|++++.++..|++++++++++++++|++++|+||+|.+
T Consensus 85 ~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~tklV~vesp~NptG~v 164 (427)
T PRK05994 85 ASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAITPRTKAIFIESIANPGGTV 164 (427)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCee
Confidence 9999998 777788999999999999999988777777788999999999989999999999899999999999999999
Q ss_pred cCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecCh----------------
Q psy12791 160 FDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDD---------------- 223 (393)
Q Consensus 160 ~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~---------------- 223 (393)
+|+++|.++|+++ |+++|+|++++.+....++..++|+++.|++|+++|+.|.-+|+++....
T Consensus 165 ~dl~~I~~la~~~-gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~ 243 (427)
T PRK05994 165 TDIAAIAEVAHRA-GLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPR 243 (427)
T ss_pred cCHHHHHHHHHHc-CCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCc
Confidence 9999999999999 99999999999887778888899999999999998777766676663211
Q ss_pred -H-----HHHHH----------HHHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCC
Q psy12791 224 -S-----LQARL----------KFLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGL 287 (393)
Q Consensus 224 -~-----~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l 287 (393)
. +.+.+ .......|..+++++++++.++++++..|++++.+++..+.++|+.+|.+..+.+|++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l 323 (427)
T PRK05994 244 PEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGL 323 (427)
T ss_pred chhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCC
Confidence 0 11111 1123356888999999999999999999999999999999999999999999999999
Q ss_pred CCCcchHHHhhhc-CCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCe
Q psy12791 288 PSHPNHELAKSQW-SGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNL 366 (393)
Q Consensus 288 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~ 366 (393)
+..+.|.++.+.+ .++|++++|.++++.+...+|++.++.+..+.|+|+++|++++|..++|..++.+.....|++++.
T Consensus 324 ~~~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~l 403 (427)
T PRK05994 324 PDDPYHALAQKYSPKGAGAVFTFGLKGGYEAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDV 403 (427)
T ss_pred CCCccHHHHHHhcCCCceEEEEEEecCCHHHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCc
Confidence 9999999999985 789999999997678889999999999999999999999999999999999999988899999999
Q ss_pred EEEEecCCChHHHHHHHHHHHHH
Q psy12791 367 VRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 367 iRls~~~~~~~~~i~~l~~al~~ 389 (393)
||||+|.|+.++++++|.+||++
T Consensus 404 iRlsvGlE~~~dli~dl~~Al~~ 426 (427)
T PRK05994 404 VRLSIGIEDVDDIIADLEQALAK 426 (427)
T ss_pred EEEEeccCCHHHHHHHHHHHHhh
Confidence 99999999999999999999975
No 42
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=1e-50 Score=379.38 Aligned_cols=362 Identities=40% Similarity=0.678 Sum_probs=317.5
Q ss_pred CCCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHH
Q psy12791 5 PQDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGL 84 (393)
Q Consensus 5 ~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~ 84 (393)
++..++.|.++|+|..++... ++..+|++.+++|....... ...+.|+|+++|...+|++++|+++|.++.+++++|+
T Consensus 2 ~~~~~~~t~~~~~~~~~~~~~-~~~~~pi~~~st~~~~~~~~-~~~~~Y~R~~~p~~~~le~~lA~leg~~~~v~~~sG~ 79 (364)
T PRK07269 2 SKDLHINTILAQAGIKSDEAT-GALVTPLHFSTTYQHPEFGQ-STGFDYTRTKNPTRAKLEETLAAIESADYALATSSGM 79 (364)
T ss_pred CccCCcccceeeCCCCCCCCC-CCccCCccCCcceecCCCCC-cCCcceeCCCCccHHHHHHHHHHHhCCCeEEEeCCHH
Confidence 445568899999997654433 46788999999997655332 3458899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHH
Q psy12791 85 GAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKA 164 (393)
Q Consensus 85 ~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~ 164 (393)
+|+.++..++++||+|+++.+.|+++...+.......+.++.+. .|+++++++++++|++|++++|+||||.+.|+++
T Consensus 80 aAi~~~l~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~--~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~ 157 (364)
T PRK07269 80 SAIVLAFSVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYA--NTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEK 157 (364)
T ss_pred HHHHHHHHHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEec--CCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHH
Confidence 99833335679999999999999988765555444445555543 3889999999999999999999999999999999
Q ss_pred HHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHH
Q psy12791 165 ISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFD 244 (393)
Q Consensus 165 l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (393)
|.++|+++ |+++|+|++|..+..+.++..++|+++.|++|+++|+.++-+|+++++++++.++++..+...|...++.+
T Consensus 158 I~~la~~~-gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~ 236 (364)
T PRK07269 158 VAKLAHAK-GAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFD 236 (364)
T ss_pred HHHHHHHc-CCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHH
Confidence 99999999 99999999998877778888899999999999998877777999998778898988877777788899999
Q ss_pred HHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHh
Q psy12791 245 CWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLES 324 (393)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (393)
++++.++++++..+++++.+++..+.+||+.+|.+.++.+|+ .|++++|.+. +.+...+|++.
T Consensus 237 a~l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg----------------~gg~~sf~~~-~~~~~~~f~~~ 299 (364)
T PRK07269 237 SYLLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG----------------KGGMISFKVA-DETRIPHILNS 299 (364)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC----------------cCcEEEEEEC-CHHHHHHHHHh
Confidence 999999999999999999999999999999999999999987 4799999995 67888999999
Q ss_pred cCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 325 LLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 325 l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
++.+..+.++|+.+|+..+|..++|..++.+.+...|+.++.||||+|.|+.++++++|.+||+
T Consensus 300 l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE~~~dli~dl~~al~ 363 (364)
T PRK07269 300 LKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIEDARDLIADLKQALE 363 (364)
T ss_pred CCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999888888899999999999999999999999999985
No 43
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=8.7e-51 Score=383.72 Aligned_cols=359 Identities=32% Similarity=0.521 Sum_probs=314.9
Q ss_pred CCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCC
Q psy12791 27 QCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGD 98 (393)
Q Consensus 27 ~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd 98 (393)
++..+|++++++|..+..+. -...+.|+|+++|...+|++++|++.|.+.++++++|+.|+ .++.+++++||
T Consensus 8 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~Gd 87 (397)
T PRK05939 8 GAVHKPIHTSVTYGYEDARDLIDVFQGKKPGFTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRAGD 87 (397)
T ss_pred CCccCCccCCCCeecCCHHHHHHhhcCCcCCCCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCCCC
Confidence 46778999999987654321 12247799999999999999999999999999999999998 77778899999
Q ss_pred eEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEE
Q psy12791 99 HIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLV 178 (393)
Q Consensus 99 ~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~li 178 (393)
+|+++++.|+++...+. .++..|++++.++..|++++++.+.++|++|++++|+||||.+.|+++|.++|+++ |+++|
T Consensus 88 ~Vv~~~~~y~~t~~~~~-~l~~~G~~v~~v~~~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~-gi~li 165 (397)
T PRK05939 88 HLVSSQFLFGNTNSLFG-TLRGLGVEVTMVDATDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRER-GLLYV 165 (397)
T ss_pred EEEECCCccccHHHHHH-HHHhcCCEEEEECCCCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHc-CCEEE
Confidence 99999999988765554 36778999999999999999999999999999999999999999999999999999 99999
Q ss_pred EeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChH--------H-------------HHHHH-HHHHhc
Q psy12791 179 LDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDS--------L-------------QARLK-FLQNSM 236 (393)
Q Consensus 179 vDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~--------~-------------~~~~~-~~~~~~ 236 (393)
+|++|+.+....+...++|+++.|+||+++| .|-++|+++..+.. + +..++ ......
T Consensus 166 vD~t~a~~~~~~~~~~gaDivv~S~sK~~~g-~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (397)
T PRK05939 166 VDNTMTSPWLFRPKDVGASLVINSLSKYIAG-HGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDM 244 (397)
T ss_pred EECCcccccccCccccCCEEEEecCeecccC-CCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhc
Confidence 9999987765567777999999999999965 56677776664221 1 11121 223457
Q ss_pred CCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHH
Q psy12791 237 GVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAE 316 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
|...++.+++++.++++++..|++++.+|+..+++||+.+|.|.+|.+|++++.++|.++.+.+.++|++++|.++ +.+
T Consensus 245 G~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~-~~~ 323 (397)
T PRK05939 245 GATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELA-DGI 323 (397)
T ss_pred CCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeC-CHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999996 456
Q ss_pred HHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 317 ETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
...+|++.++.+..+.++|+++|+.++|..++|..++.+.....|++++.||||+|.|+.++++++|.+||++
T Consensus 324 ~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGlEd~~dLi~dl~~Al~~ 396 (397)
T PRK05939 324 DCFDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGIEDEADLIADFEQALDA 396 (397)
T ss_pred HHHHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHhc
Confidence 7889999999999999999999999999999999988888888999999999999999999999999999974
No 44
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=3.8e-50 Score=377.66 Aligned_cols=361 Identities=44% Similarity=0.740 Sum_probs=321.3
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHHH
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAVT 88 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al~ 88 (393)
+++|.++|.|..++... ++..+|++.+++|....... ...+.|+||++|...+|++++|+++|.+.++++++|++++.
T Consensus 4 ~~~t~~~~~~~~~~~~~-~~~~~pi~~~~~~~~~~~~~-~~~~~y~r~~~pt~~~le~~la~l~g~~~~~~~~sG~~ai~ 81 (366)
T PRK08247 4 TIETKLAQIGNRSDERT-GTVNPPVYFSTAYRHEGIGE-STGFDYSRTGNPTRGVLEQAIADLEGGDQGFACSSGMAAIQ 81 (366)
T ss_pred CcchhheeCCCCCCCCC-CCccCCcccCcccccCCCCC-cCCccccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHH
Confidence 56788899986554332 57789999999997654332 23588999999999999999999999998999999999884
Q ss_pred HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHH
Q psy12791 89 AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAV 168 (393)
Q Consensus 89 ~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l 168 (393)
++..++++||+|++++|.|++++..+...++..|+++++++..|++++++++.+++++|++++|+||+|...++++|.++
T Consensus 82 ~~~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~l 161 (366)
T PRK08247 82 LVMSLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKI 161 (366)
T ss_pred HHHHHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHH
Confidence 45567899999999999999988888888888999999999999999999998899999999999999999999999999
Q ss_pred HHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHH
Q psy12791 169 VKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLV 248 (393)
Q Consensus 169 ~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (393)
|+++ |+++|+|++|..+....+...++|+++.|+||+++|++++++|+++++++++.++++..+...+...++..++++
T Consensus 162 a~~~-g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~ 240 (366)
T PRK08247 162 AKKH-GLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLL 240 (366)
T ss_pred HHHc-CCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHH
Confidence 9999 999999999987776677777899999999999988889999999987678888888777777778889999999
Q ss_pred HhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc
Q psy12791 249 TRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF 328 (393)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (393)
.++++++..+++++.+++..+.++|+.+|.+..+.+|+ .|+++.|.+. ..+...+|++.++.+
T Consensus 241 ~~~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~----------------~gg~~sf~~~-~~~~~~~~~~~l~~~ 303 (366)
T PRK08247 241 IRGMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPG----------------RGGMLSFRLQ-DEEWVNPFLKSLKLI 303 (366)
T ss_pred HhccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCC----------------cCcEEEEEEC-CHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999998888885 3789999995 577788999999999
Q ss_pred ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 329 RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 329 ~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
..+.++|+.+++...|..+.|..++.+.+...|++++.+|||+|.|+.++++++|.+||++
T Consensus 304 ~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGlE~~~dl~~dl~~al~~ 364 (366)
T PRK08247 304 TFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGIENVEDLIADLKQAFKQ 364 (366)
T ss_pred eEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 9999999999999999988888888888888999999999999999999999999999986
No 45
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=5e-50 Score=374.88 Aligned_cols=368 Identities=39% Similarity=0.650 Sum_probs=326.2
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEec
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYS 81 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~ 81 (393)
++.|.++|+|..++... .+..+|++.+++|.....+. ....+.|+|..+|...+|++.+|++.|.+.+++++
T Consensus 8 ~~~t~~~~~~~~~~~~~-~~~~~pI~~ss~~~~~~~~~~~~~~~~~~~~~~Y~r~~~P~~~~lE~~la~leg~~~av~~s 86 (384)
T PRK06434 8 GFNTRAVQSGELRDPRF-GNVTTPIFETSTFVYPNSEKEAYMDSTRGMPYIYTRWGNPTVQAFEEKYAVLENAEHALSFS 86 (384)
T ss_pred CcccceeECCCCCCCCC-CCccCCeeCCcceecCChHHhhhccccccCCcceeCCCChhHHHHHHHHHHHhCCCcEEEeC
Confidence 47788999996554333 46778999999987655321 02247899999999999999999999999999999
Q ss_pred cHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCC-CCcEEEEecCCCCcccc
Q psy12791 82 SGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKP-NTKMVWIENPTNPLMTV 159 (393)
Q Consensus 82 ~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~ 159 (393)
||+.|+ .++.+++++||+|+++...|++++..+...+..+|+++++++.++.+.+. +++ ++++|++++|.|||+.+
T Consensus 87 SG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~~v 164 (384)
T PRK06434 87 SGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTLKV 164 (384)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCcee
Confidence 999998 77888899999999999999999888878888999999999987655554 444 68999999999999999
Q ss_pred cCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCC
Q psy12791 160 FDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVV 239 (393)
Q Consensus 160 ~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 239 (393)
.|+++|.++|+++ + +++|++++.++.+.|+..++|+++.|.+|+++|+.+..+|.++++++++.++++..+...|..
T Consensus 165 ~Di~~I~~la~~~-~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~ 241 (384)
T PRK06434 165 PDIKNVSSFCHEN-D--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSN 241 (384)
T ss_pred ecHHHHHHHHHHc-C--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCC
Confidence 9999999999999 7 567999988877788888999999999999987777789999887788888887776677888
Q ss_pred CCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHH
Q psy12791 240 PSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETR 319 (393)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (393)
.++.++++..++++++..|++++.++++.++++|+.+|.|++|.||+++ ++.+.+.++|++++|.++ +.+++.
T Consensus 242 ~~~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~g~g~~~sf~l~-~~~~~~ 314 (384)
T PRK06434 242 PDPIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLRGFGGMLSFELR-SMEDVH 314 (384)
T ss_pred CCHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcCCCCceEEEEEC-CHHHHH
Confidence 8999999999999999999999999999999999999999999999985 677778899999999996 588899
Q ss_pred HHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 320 IFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 320 ~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
+|+++|+.+..+.|+|+++|++++|..++|..++.+.....|++++.||||+|.|+.++++++|.+||++
T Consensus 315 ~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGlEd~~dLi~dl~~Al~~ 384 (384)
T PRK06434 315 KFIRNLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGIEDIDDLIKDIENALSK 384 (384)
T ss_pred HHHHhCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999863
No 46
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=1.6e-49 Score=377.14 Aligned_cols=372 Identities=29% Similarity=0.432 Sum_probs=319.7
Q ss_pred ccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC------CC-----CCccccCCCCchHHHHHHHHHHHhCCCcEE
Q psy12791 10 FATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ------PP-----QGFEYSRSNNPTRRNLERCIASLEEAKHGL 78 (393)
Q Consensus 10 ~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~~-----~~~~y~~~~~~~~~~lr~~la~~~~~~~~i 78 (393)
-.+.++|+|..++.. . ...+|++.+.+|..+..+. .. ..+.|+|+++|..++|++.+|+++|.+.++
T Consensus 18 ~~~~~~~~~~~~~~~-~-~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~lA~l~g~~~~l 95 (418)
T PLN02242 18 PAAALASARHEFGEH-G-GVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQMAALEGTEAAY 95 (418)
T ss_pred hHHHHhcCCCCCCCC-C-CccCCcccCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHHHHHHhCCCeEE
Confidence 456788999887643 2 4488999999997654321 01 236799999999999999999999999999
Q ss_pred EeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHh-cccCCcEEEeeCCCCHHHHHhhcCC-CCcEEEEecCCCC
Q psy12791 79 CYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQV-APKIGLEVDFVDLRKIENLIKYIKP-NTKMVWIENPTNP 155 (393)
Q Consensus 79 ~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~-~~~~g~~v~~~~~~d~~~l~~~l~~-~~~~v~l~~p~np 155 (393)
++++|++++ .++.+++++||+|+++.|.|+++...+... .+..|++++.++..|++++++++++ ++++|++++|+||
T Consensus 96 ~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~NP 175 (418)
T PLN02242 96 CTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESISNP 175 (418)
T ss_pred EEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCCCC
Confidence 999999998 778888999999999999998765444333 3458999999998899999999988 4999999999999
Q ss_pred cccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCce-EEEEEecChHHHHHHHHHHH
Q psy12791 156 LMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVV-MGATVTNDDSLQARLKFLQN 234 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r-~G~~~~~~~~~~~~~~~~~~ 234 (393)
||.+.++++|.++|+++ |+++|+|++|..+. ..+...++|+++.|+||+++ .+|.+ +||++++ +++++.++....
T Consensus 176 tG~v~dl~~I~~la~~~-gi~livDea~~~~~-~~~~~~g~divv~S~SK~l~-g~g~~~gG~iv~~-~~li~~l~~~~~ 251 (418)
T PLN02242 176 TLTVADIPELARIAHEK-GVTVVVDNTFAPMV-LSPARLGADVVVHSISKFIS-GGADIIAGAVCGP-AELVNSMMDLHH 251 (418)
T ss_pred CCcccCHHHHHHHHHHh-CCEEEEECCCCccC-CCHHHcCCcEEEEeCccccC-CCCCceEEEEEcC-HHHHHHHHHHhh
Confidence 99999999999999999 99999999997543 34555689999999999995 45544 7999987 788888875533
Q ss_pred ----hcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhc---CCCcceE
Q psy12791 235 ----SMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQW---SGTSGML 307 (393)
Q Consensus 235 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~---~~~~~~~ 307 (393)
..|...++..++++.+.++++..+++++.+++..+.++|++++ ..+.+|++++++.+.++.+++ .++|+++
T Consensus 252 ~~~~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~--~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~ 329 (418)
T PLN02242 252 GALMLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG--LKVIYPGLEDHPQHALLKSMANKGYGFGGLL 329 (418)
T ss_pred hhhhccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC--CEEECCCCCCCccHHHHHHhcccCCCceeEE
Confidence 3566778899999999999999999999999999999999985 368999999999999999988 5899999
Q ss_pred EEEEcCCHHHHHHHHHhcCcc----ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCC-hHHHHHH
Q psy12791 308 SFYVNGGAEETRIFLESLLIF----RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEG-YTDLIAD 382 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~l~~~----~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~-~~~~i~~ 382 (393)
+|.+. +.+.+.+|+++++.+ ..+.++|+++|+..+|..++|..++.+.....|++++.||||+|.|+ .|++|++
T Consensus 330 sf~l~-~~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~~dli~d 408 (418)
T PLN02242 330 CLDMD-TEERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYTGTLEQRWSQ 408 (418)
T ss_pred EEEEC-CHHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCCCCHHHHHHH
Confidence 99994 788999999999976 67899999999999999999999999888889999999999999995 9999999
Q ss_pred HHHHHHHh
Q psy12791 383 LDQALRKA 390 (393)
Q Consensus 383 l~~al~~~ 390 (393)
|.+||+++
T Consensus 409 l~~al~~~ 416 (418)
T PLN02242 409 FEKALSAM 416 (418)
T ss_pred HHHHHHHh
Confidence 99999875
No 47
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-47 Score=362.87 Aligned_cols=366 Identities=36% Similarity=0.635 Sum_probs=317.9
Q ss_pred eeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCC-------CCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHH
Q psy12791 14 AVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQP-------PQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGA 86 (393)
Q Consensus 14 ~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-------~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~a 86 (393)
.+|++.+.+.. .+..+|++.+++|.....+.. ...+.|+|+++|...+|++++|+++|.+++++++||+.+
T Consensus 13 ~~~~~~~~~~~--~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~~A 90 (389)
T PRK05968 13 LITAHDEGNAF--DAVVPPIFQTSLFTFDSYDEMEDVYAGEKVRPIYSRGDNPTVRAFEEMLAKLEGAEDARGFASGMAA 90 (389)
T ss_pred eeecCCCccCC--CCccCCccCCcceecCCHHHHHHhhcCCCCCccccCCCChhHHHHHHHHHHHhCCCcEEEECCHHHH
Confidence 45776665433 467789999999976543211 234779999999999999999999999999999999999
Q ss_pred H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHH
Q psy12791 87 V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAI 165 (393)
Q Consensus 87 l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l 165 (393)
+ .++.+++++||+|+++.++|++++..+...++..|+++++++..|++++++++ +++++|++++|+|+++.+.|+++|
T Consensus 91 i~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i 169 (389)
T PRK05968 91 ISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKAL-PGAKLLYLESPTSWVFELQDVAAL 169 (389)
T ss_pred HHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHH
Confidence 8 77777899999999999999998888888888899999999998999999988 579999999999999999999999
Q ss_pred HHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH-hcCCCCCHHH
Q psy12791 166 SAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN-SMGVVPSPFD 244 (393)
Q Consensus 166 ~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 244 (393)
.++|+++ |+++|+|++|+.+....+...+.|+++.|+||+++|+.++++|+++++ ++++++++.... ..+...++.+
T Consensus 170 ~~la~~~-gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~-~~~~~~l~~~~~~~~g~~~~~~~ 247 (389)
T PRK05968 170 AALAKRH-GVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGS-KEHIARINAEAYPYLGAKLSPFE 247 (389)
T ss_pred HHHHHHc-CCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEEC-HHHHHHHHHHHHHhCCCCCChHH
Confidence 9999999 999999999998776667778899999999999987777889999976 788888775443 4677788999
Q ss_pred HHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHh
Q psy12791 245 CWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLES 324 (393)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (393)
++++.++++++..+++++.++++.+.++|+.+|.+..+.+|++++++. +.+.+++++++|.++ +.....+|+++
T Consensus 248 A~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~-----~~~~g~g~~~sf~~~-~~~~~~~f~~~ 321 (389)
T PRK05968 248 AWLLLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPP-----AGLSGTSGLFSFIFR-EGIDVRAFADA 321 (389)
T ss_pred HHHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChH-----HhCCCCceEEEEEEC-CHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999887763 345678899999995 35578999999
Q ss_pred cCccccccccCCccccccCcccccCCC-CChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 325 LLIFRCAESLGGIESLADLPAEMTHKS-IPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 325 l~~~~~~~~~g~~~s~~~~~~~~~~~~-~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
|+.++++.++|+.+|+++ |..++|.. .+.+.....|++++.||+|+|.|++++++++|.+||+++.
T Consensus 322 L~~~~~~~s~G~~~slv~-p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~~~ 388 (389)
T PRK05968 322 LKLFRLGVSWGGHESLVV-PAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAAAS 388 (389)
T ss_pred CCccEEecCCCCCCceee-eCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHhh
Confidence 999999999999999998 77777776 4466777789999999999999999999999999998764
No 48
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-39 Score=301.15 Aligned_cols=312 Identities=20% Similarity=0.240 Sum_probs=239.0
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhC-CC-cEEEeccHHHH-H-HHHHHhcCCC
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEE-AK-HGLCYSSGLGA-V-TAVTHLLSAG 97 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~-~~-~~i~~~~G~~a-l-~~~~~~~~~g 97 (393)
+++| ++|+||++||+.+...+... ...+.+||++...++++++|++++ .+ +.|++++|+++ | ..+..++.+|
T Consensus 23 ~~i~LssNenP~gp~~~~~~~~~~~---~~~~~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~g 99 (356)
T COG0079 23 GIIKLSSNENPYGPPPKVIEAIRAA---LDKLNRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPG 99 (356)
T ss_pred cceeecCCCCCCCCCHHHHHHHHHH---HHhhccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCC
Confidence 5778 99999999998887766554 235788899999999999999999 66 79999999999 5 6667889999
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC-
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH- 172 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~- 172 (393)
|.|+++.|+|+ +|...++..|++++.++.. |++.+.+.+.+++++|++||||||||..++.++|.+++...
T Consensus 100 d~vl~~~Ptf~----~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~ 175 (356)
T COG0079 100 DTVLIPEPTFS----MYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALP 175 (356)
T ss_pred CEEEEcCCChH----HHHHHHHhcCCeEEEecccccccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC
Confidence 99999999998 6888999999999999983 78888888888899999999999999999999999999975
Q ss_pred CCcEEEEeCccCcccccCCC----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHH
Q psy12791 173 PDILLVLDNTFLTAYYQKSL----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLV 248 (393)
Q Consensus 173 ~~~~livDea~~~~~~~~~~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (393)
.+.+||+||||.++...... ...+.++++||||.| |++|+|+||++++ +++++.+++.+..|..+ ...+.++
T Consensus 176 ~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~-gLAGlRlGy~ia~-~~~i~~l~~vr~p~~v~--~~a~~aa 251 (356)
T COG0079 176 EGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAF-GLAGLRVGYAIAN-PELIAALNKVRPPFNVS--SPALAAA 251 (356)
T ss_pred CCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhh-hcchhceeeccCC-HHHHHHHHHhcCCCCCC--HHHHHHH
Confidence 26799999999997763222 235589999999999 7999999999987 99999999988876543 3333333
Q ss_pred Hhcc---CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhc
Q psy12791 249 TRGL---KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESL 325 (393)
Q Consensus 249 ~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (393)
...+ +.+...+++..+.++++.+.|+.++ +..+ +|+ ..+++.+.++ +.+ ...+.+.|
T Consensus 252 ~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v-~pS----------------~aNFvlv~~~-~~~-~~~l~~~L 311 (356)
T COG0079 252 IAALRDADYLEESVERIREERERLYAALKALG-LFGV-FPS----------------QANFVLVRVP-DAE-AAALAEAL 311 (356)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCee-cCC----------------CCcEEEEECC-Ccc-HHHHHHHH
Confidence 3333 3355567777788899999998776 4322 333 2578888884 323 44555555
Q ss_pred CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 326 LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 326 ~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
...++.+...+. .+..++++|+|++..... +++.++|+++
T Consensus 312 ~~~giivR~~~~----------------------~~~~~~~lRitvgt~een---~~ll~AL~~~ 351 (356)
T COG0079 312 LKKGILVRDCSS----------------------VGLLPGYLRITVGTPEEN---DRLLAALREV 351 (356)
T ss_pred HHCCEEEEeCCC----------------------CCCCCCeEEEEeCCHHHH---HHHHHHHHHH
Confidence 444444433211 012368999999755332 5666666554
No 49
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.6e-36 Score=280.95 Aligned_cols=301 Identities=17% Similarity=0.220 Sum_probs=218.2
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCC-
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAG- 97 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~g- 97 (393)
..++ ++|+||+++++... ....++||++...+|++++|+++|.+ ++|++|+|+++ + .++.+++++|
T Consensus 29 ~~~~l~~Nenp~~~~~~~~---------~~~~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~ 99 (351)
T PRK01688 29 GDVWLNANEYPTAVEFQLT---------QQTLNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGK 99 (351)
T ss_pred CceEecCCCCCCCCChhhc---------ccccccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCC
Confidence 3466 89999999987531 12366788888899999999999987 79999999987 6 6666778887
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 172 (393)
|.|+++.|+|+ .|...++..|++++.++.+ |++++++.+ +++++|+++|||||||.+++.+++.++++..
T Consensus 100 ~~vli~~P~y~----~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~ 174 (351)
T PRK01688 100 DAILYCPPTYG----MYSVSAETIGVEIRTVPTLDNWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELT 174 (351)
T ss_pred CEEEEcCCCHH----HHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhC
Confidence 89999999998 5788888999999998874 678888887 5899999999999999999999888888754
Q ss_pred -CCcEEEEeCccCcccccCCC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHH
Q psy12791 173 -PDILLVLDNTFLTAYYQKSL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCW 246 (393)
Q Consensus 173 -~~~~livDea~~~~~~~~~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
++++||+||+|.++...... ..++.++++||||++ |++|+|+||++++ +++++.++.....+. .+...+.
T Consensus 175 ~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~-glaGlRiGy~i~~-~~~i~~l~~~~~~~~--v~~~~~~ 250 (351)
T PRK01688 175 RGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAF-ALAGLRCGFTLAN-EEVINLLLKVIAPYP--LSTPVAD 250 (351)
T ss_pred CCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhh-cCHHHHHhHHhCC-HHHHHHHHhccCCCC--CCHHHHH
Confidence 26799999999987532111 135779999999999 7999999999987 888888876554433 2333333
Q ss_pred HHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHH
Q psy12791 247 LVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIF 321 (393)
Q Consensus 247 ~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
.+...++ .+...++...++++.+.+.|+.++++..+ .|. .+.++++.+. +. +.+
T Consensus 251 ~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~ps----------------~~nfi~~~~~-~~---~~l 309 (351)
T PRK01688 251 IAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQV-FDS----------------ETNYILARFT-AS---SAV 309 (351)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE-CCC----------------CCcEEEEEcC-CH---HHH
Confidence 3333333 23344555667778888888877654322 232 2567888884 32 334
Q ss_pred HHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 322 LESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 322 ~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
.+.|...++.+..++.+ + |. ++++|+|++ +.++.+.+.++|
T Consensus 310 ~~~L~~~gi~vr~~~~~-----~----------------~~-~~~iRis~~---~~~e~~~l~~al 350 (351)
T PRK01688 310 FKSLWDQGIILRDQNKQ-----P----------------GL-SNCLRITIG---TREECQRVIDAL 350 (351)
T ss_pred HHHHHHCCeEEEECCCc-----C----------------CC-CCeEEEeCC---CHHHHHHHHHhh
Confidence 44444345544433211 0 11 579999999 456677877776
No 50
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-35 Score=280.88 Aligned_cols=314 Identities=17% Similarity=0.201 Sum_probs=226.9
Q ss_pred CCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHh
Q psy12791 18 GSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHL 93 (393)
Q Consensus 18 g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~ 93 (393)
|....++++ +.|+||+++++.+.+++... ....+|+++...+||+++|++++.+ ++|++|+|+++ + .++..+
T Consensus 48 ~~~~~~~i~l~~n~~p~~~~~~v~~a~~~~----~~~~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~ 123 (380)
T PLN03026 48 GRKPEDIVKLDANENPYGPPPEVLEALGNM----KFPYVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCV 123 (380)
T ss_pred CCCccceEEccCCCCCCCCCHHHHHHHHhh----HhhccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHh
Confidence 444567788 89999999998876655321 2234567788899999999999977 78999999887 6 556677
Q ss_pred cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhc-CCCCcEEEEecCCCCcccccCHHHHHH
Q psy12791 94 LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYI-KPNTKMVWIENPTNPLMTVFDVKAISA 167 (393)
Q Consensus 94 ~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~~~l~~ 167 (393)
+++||+|++++|+|+ .|...++..|++++.++.+ |++++++.+ .+++++|++++||||||.+++.+++.+
T Consensus 124 ~~~gd~Vlv~~P~y~----~y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~ 199 (380)
T PLN03026 124 LDPGDKIIDCPPTFG----MYVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLK 199 (380)
T ss_pred cCCCCEEEEcCCChH----HHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHH
Confidence 899999999999997 4777778899999998774 688998888 678999999999999999999999999
Q ss_pred HHHhCCCcEEEEeCccCcccccC-CC----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCH
Q psy12791 168 VVKQHPDILLVLDNTFLTAYYQK-SL----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSP 242 (393)
Q Consensus 168 l~~~~~~~~livDea~~~~~~~~-~~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (393)
+++. .+++|+||+|..+.... .. ..++.++++||||.+ |++|+|+||++++ +++++.+......+ ..+.
T Consensus 200 l~~~--~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~-glaGlRiGy~~~~-~~~i~~l~~~~~~~--~~~~ 273 (380)
T PLN03026 200 ILEL--PILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRA-GLAGLRVGYGAFP-LSIIEYLWRAKQPY--NVSV 273 (380)
T ss_pred HHhc--CCEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhh-cCccccceeeecC-HHHHHHHHHhcCCC--CCCH
Confidence 9975 48999999998765421 11 135679999999999 7999999999997 88888887665433 2344
Q ss_pred HHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHH
Q psy12791 243 FDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETR 319 (393)
Q Consensus 243 ~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (393)
..+..+...++. +...++...+++..+.+.|+.++.+. + .|. .+.++++.+++. ....
T Consensus 274 ~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~p~----------------~~~f~~~~~~~~-~~~~ 334 (380)
T PLN03026 274 AAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLE-P-YPS----------------DANFILCRVTSG-RDAK 334 (380)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCe-E-CCC----------------CCeEEEEECCCC-CCHH
Confidence 444444444433 33345555667777888888764432 2 232 256788888421 1233
Q ss_pred HHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 320 IFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 320 ~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.+.+.+...++.+..+.. + ..++++|||++ +.++.+.+.++|+++
T Consensus 335 ~~~~~l~~~gI~v~~~~~------~-----------------~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 335 KLKEDLAKMGVMVRHYNS------K-----------------ELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred HHHHHHHHCCeEEEECCC------C-----------------CCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 455544444555543311 0 01579999998 344567777777654
No 51
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=3.6e-35 Score=273.68 Aligned_cols=250 Identities=18% Similarity=0.174 Sum_probs=188.6
Q ss_pred CCCCCCCccceeeccCCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--cEEE
Q psy12791 3 FLPQDTAFATKAVHIGSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK--HGLC 79 (393)
Q Consensus 3 ~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~--~~i~ 79 (393)
.+.|+......+...|..+++++| |+|+||+++++.... ...+.+||++. .+|++++|+++|.+ ++|+
T Consensus 5 ~~~hg~~~~~~~~~~~~~~~~~i~ls~Nenp~~~~~~~~~--------~~~~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~ 75 (339)
T PRK06959 5 PIAHGGNLHEAARRYGIPYDAWLDLSTGINPHGYPVPPVP--------ADAWRRLPEDD-DGLAACAARYYGAPDAAHVL 75 (339)
T ss_pred CcCCCchHHHHHHHcCCChhhhceeccCCCCCCCCCCCCC--------HHHHHhCCCch-HHHHHHHHHHhCCCCcccEE
Confidence 456777766666667777788899 999999998832211 13466788887 99999999999985 6999
Q ss_pred eccHHHH-HHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccc
Q psy12791 80 YSSGLGA-VTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMT 158 (393)
Q Consensus 80 ~~~G~~a-l~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 158 (393)
+|+|+++ +.++..++++|| |++++|+|+ .|...++..|++++.++.++ + .+.+.+++++++|||||||.
T Consensus 76 i~~Gs~e~i~~l~~~~~~g~-v~v~~P~y~----~y~~~~~~~g~~~~~v~~~~-~----~~~~~~~~v~l~nPnNPTG~ 145 (339)
T PRK06959 76 PVAGSQAAIRALPALLPRGR-VGIAPLAYS----EYAPAFARHGHRVVPLDEAA-D----TLPAALTHLIVVNPNNPTAE 145 (339)
T ss_pred ECcCHHHHHHHHHHhcCCCe-EEEcCCCcH----HHHHHHHHCCCEEEeecccc-h----hccccCCEEEEeCCCCCCCC
Confidence 9999998 555556678876 888999998 58888899999999998754 2 23345689999999999999
Q ss_pred ccCHHHHHHHH---HhCCCcEEEEeCccCcccccCCC----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHH
Q psy12791 159 VFDVKAISAVV---KQHPDILLVLDNTFLTAYYQKSL----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKF 231 (393)
Q Consensus 159 ~~~~~~l~~l~---~~~~~~~livDea~~~~~~~~~~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~ 231 (393)
+++.+++.+++ +++ +.++|+||+|.++....++ ...+.++++||||.+ |+||+|+||++++ +++++.++.
T Consensus 146 ~~s~~~l~~l~~~~~~~-~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~-gl~GlRiGy~v~~-~~li~~l~~ 222 (339)
T PRK06959 146 RLPAARLLRWHAQLAAR-GGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFF-GLAGVRAGFVLAA-PALLAALRD 222 (339)
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEEECCCccCCCcccchhccCCCCEEEEecChhhc-CCcchheEEEecC-HHHHHHHHH
Confidence 99977777664 467 8999999999986532221 224569999999999 7999999999997 889998887
Q ss_pred HHHhcCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 232 LQNSMGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
....+. .+...+..+...++. ....++...+++..+.+.|+.+
T Consensus 223 ~~~~~~--vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 268 (339)
T PRK06959 223 ALGAWT--VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH 268 (339)
T ss_pred hcCCCC--CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 665433 344455555555543 2334555666777888888764
No 52
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-35 Score=277.18 Aligned_cols=309 Identities=19% Similarity=0.198 Sum_probs=224.2
Q ss_pred CCCCCCCCCCCCcc-CCeeeeCCCCCCCCCc-cccCCCCchHHHHHHHHHHHhC----C---C-cEEEeccHHHH-H-HH
Q psy12791 22 DQWRSQCVIPPIIL-STTFKQNTPGQPPQGF-EYSRSNNPTRRNLERCIASLEE----A---K-HGLCYSSGLGA-V-TA 89 (393)
Q Consensus 22 ~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~-~y~~~~~~~~~~lr~~la~~~~----~---~-~~i~~~~G~~a-l-~~ 89 (393)
.++++-+..+|-.+ |..+.++....+.... .|+ +..+..+||+++|+++. . + +.|++|+|+++ + .+
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~--~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~ 105 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYT--PSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLA 105 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCC--CCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHH
Confidence 45666445555444 4445555444333332 343 67889999999998753 1 1 45999999876 7 78
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC-----C---CHHHHHhhcCCCCcEEEEecCCCCcccccC
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL-----R---KIENLIKYIKPNTKMVWIENPTNPLMTVFD 161 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~-----~---d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 161 (393)
+.+++++||+|++++|.|+. |....+..|++++.+++ + |++++++++.++||+|++++||||||.+++
T Consensus 106 ~~a~~~pGDeVlip~P~Y~~----y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~ 181 (393)
T COG0436 106 FLALLNPGDEVLIPDPGYPS----YEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYS 181 (393)
T ss_pred HHHhcCCCCEEEEeCCCCcC----HHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCC
Confidence 88999999999999999995 78888999999999985 2 699999999999999999999999999998
Q ss_pred ---HHHHHHHHHhCCCcEEEEeCccCcccccC--CCC---C----cCcEEEEcccccccCCCCceEEEEEecChHHHHHH
Q psy12791 162 ---VKAISAVVKQHPDILLVLDNTFLTAYYQK--SLP---W----GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 162 ---~~~l~~l~~~~~~~~livDea~~~~~~~~--~~~---~----~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~ 229 (393)
+++|+++|++| +++||.||+|..+.++. +.. . ...|++.||||.+ +++|+|+||++++++++++.+
T Consensus 182 ~~~l~~i~~~a~~~-~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~-~mtGwRvG~~v~~~~~l~~~~ 259 (393)
T COG0436 182 KEELKAIVELAREH-DIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTY-GMTGWRIGWVVGPPEELIAAL 259 (393)
T ss_pred HHHHHHHHHHHHHc-CeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccc-cccccceeEeecChHHHHHHH
Confidence 77889999999 99999999999977653 111 1 2469999999999 699999999999877888888
Q ss_pred HHHHHhcCCCCCHHHHHHHHhccC------CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCC
Q psy12791 230 KFLQNSMGVVPSPFDCWLVTRGLK------TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGT 303 (393)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~ 303 (393)
...+.....+.+...+..+...++ .....++.+.+++..+.+.|.+.+++.....|. .
T Consensus 260 ~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~----------------G 323 (393)
T COG0436 260 RKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPE----------------G 323 (393)
T ss_pred HHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCC----------------e
Confidence 866666665555555554444443 233334567788889999999888776444343 1
Q ss_pred cceEEEEEcCCHHHHHHHHHh-cCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCC
Q psy12791 304 SGMLSFYVNGGAEETRIFLES-LLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEG 375 (393)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~ 375 (393)
+.++++.++.. .....|... |+..++++.+|..|... ..+++||+|+....
T Consensus 324 a~Y~~~~i~~~-~d~~~f~~~Ll~~~gV~v~PG~~Fg~~--------------------~g~~~vRis~~~~~ 375 (393)
T COG0436 324 AFYLFPKIPEL-LDSEEFAKKLLEEAGVAVVPGSGFGEP--------------------PGEGYVRLSLATSE 375 (393)
T ss_pred eEEEEeecCCC-CCHHHHHHHHHHhCCEEEecccccCCC--------------------CCCCeEEEEEecCH
Confidence 34577777532 222223222 33446777777665321 12689999998776
No 53
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=9.3e-35 Score=270.73 Aligned_cols=310 Identities=16% Similarity=0.180 Sum_probs=210.0
Q ss_pred CCCCCCccceeeccCCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEec
Q psy12791 4 LPQDTAFATKAVHIGSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYS 81 (393)
Q Consensus 4 ~~~~~~~~~~~~~~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~ 81 (393)
+.|+.+....+...| +++| ++|+||+.+ ...+.+||++.+.+||+++|+++|.+ ++|++|
T Consensus 2 ~~~~~~~~~~~~~~~----~~i~l~~Nenp~~~--------------~~~~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it 63 (332)
T PRK06425 2 RGHGGDVYEASSKYG----RIIDFSANINDFMD--------------IGDISIYPEISYTDIEDQIKIYTQGLKIKVLIG 63 (332)
T ss_pred CCCCCCHHHHHHhcC----CEEEeccccCCCcC--------------hhhcccCcCcCHHHHHHHHHHHhCCCcceEEEC
Confidence 345555444333322 5678 999999941 12356788999999999999999987 789999
Q ss_pred cHHHH-HHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----CHHHHHhhcCCCCcEEEEecCCCCc
Q psy12791 82 SGLGA-VTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----KIENLIKYIKPNTKMVWIENPTNPL 156 (393)
Q Consensus 82 ~G~~a-l~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----d~~~l~~~l~~~~~~v~l~~p~npt 156 (393)
+|+++ +..+..++++|+ |++++|+|+ .|...++..|++++.+|.+ |.+.++ ..++++|++++|||||
T Consensus 64 ~Gs~~~l~~~~~~~~~~~-vv~~~P~y~----~y~~~~~~~G~~v~~vp~~~~~~~~~~l~---~~~~k~v~l~nP~NPT 135 (332)
T PRK06425 64 PGLTHFIYRLLSYINVGN-IIIVEPNFN----EYKGYAFTHGIRISALPFNLINNNPEILN---NYNFDLIFIVSPDNPL 135 (332)
T ss_pred CCHHHHHHHHHHHhCCCc-EEEeCCChH----HHHHHHHHcCCeEEEEeCCcccCcHHHHh---hcCCCEEEEeCCCCCc
Confidence 99987 544444677764 777799998 5888899999999999875 333332 2378999999999999
Q ss_pred ccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC--CC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHH
Q psy12791 157 MTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK--SL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQ 226 (393)
Q Consensus 157 G~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~--~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~ 226 (393)
|.+++ +++|.++|+++ +++||+||+|.++.+.. +. ..++.++++||||.+ |+||+|+||++++ ++++
T Consensus 136 G~~~s~~~~~~l~~~a~~~-~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~l~GlRiGy~v~~-~~li 212 (332)
T PRK06425 136 GNLISRDSLLTISEICRKK-GALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKIL-GIPSLRIGYIATD-DYNM 212 (332)
T ss_pred CCccCHHHHHHHHHHHHHc-CCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhc-CCchhhheeeecC-HHHH
Confidence 99999 56677778889 99999999999876432 11 124679999999999 7999999999997 8888
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHh-ccCC-HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCc
Q psy12791 227 ARLKFLQNSMGVVPSPFDCWLVTR-GLKT-LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTS 304 (393)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~ 304 (393)
+.+......+. .+.....++.. ..+. ....++...+++..+.+.|+.+ ++. +..+. .+
T Consensus 213 ~~l~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~----------------~g 272 (332)
T PRK06425 213 KISRKITEPWS--VCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFR-AAGDP----------------SA 272 (332)
T ss_pred HHHHHcCCCCc--cCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ECCCC----------------Cc
Confidence 88876443322 22222222221 1112 2234555667777788888765 222 21111 25
Q ss_pred ceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHH
Q psy12791 305 GMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLD 384 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~ 384 (393)
+++|+.++ + ...+.+.+...++.+..|..+.. ..++++|||++.. ++.+.|.
T Consensus 273 ~f~~~~~~-~---~~~~~~~l~~~gi~v~~~~~f~~---------------------~~~~~iRis~~~~---~~~~~l~ 324 (332)
T PRK06425 273 NFITFMIP-D---AHDFYSYLLKNGILVRLLDDYEC---------------------LGEQYIRIAIRRR---SFNIKLV 324 (332)
T ss_pred eEEEEEcC-C---HHHHHHHHHHCCeEEEECCCCCC---------------------CCCCEEEEEeCCH---HHHHHHH
Confidence 78899884 2 23444444434666655543310 1157999999854 3345677
Q ss_pred HHHHHh
Q psy12791 385 QALRKA 390 (393)
Q Consensus 385 ~al~~~ 390 (393)
++|+++
T Consensus 325 ~al~~~ 330 (332)
T PRK06425 325 NALRNF 330 (332)
T ss_pred HHHHHH
Confidence 776654
No 54
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-34 Score=274.38 Aligned_cols=248 Identities=14% Similarity=0.101 Sum_probs=187.9
Q ss_pred CCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHh----C---CC-c-EEEeccHHHH-H-H
Q psy12791 21 PDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLE----E---AK-H-GLCYSSGLGA-V-T 88 (393)
Q Consensus 21 ~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~----~---~~-~-~i~~~~G~~a-l-~ 88 (393)
+.+.+| +.++||+.+++.+...+.+.+.. ....+|++.+..+||+++|+++ | .+ + +|++|+|+++ + .
T Consensus 43 ~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~-~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~ 121 (410)
T PRK06290 43 DMELIDMGVGEPDEMADESVVEVLCEEAKK-PENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAM 121 (410)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhC-CCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHH
Confidence 445678 88999998887766554332111 1133455678899999999985 3 32 4 7999999886 6 6
Q ss_pred HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC
Q psy12791 89 AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD 161 (393)
Q Consensus 89 ~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 161 (393)
++..++++||.|+++.|+|+. +...++..|++++.++.+ |++++++.+.+++++|++++||||||.+++
T Consensus 122 ~~~~~~~~gd~Vlv~~P~y~~----~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s 197 (410)
T PRK06290 122 LPSCFINPGDVTLMTVPGYPV----TGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVAT 197 (410)
T ss_pred HHHHhCCCCCEEEEeCCCCcc----HHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCCC
Confidence 667788999999999999984 677788899999999874 678888888778999999999999999999
Q ss_pred ---HHHHHHHHHhCCCcEEEEeCccCcccccC---CC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH
Q psy12791 162 ---VKAISAVVKQHPDILLVLDNTFLTAYYQK---SL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK 230 (393)
Q Consensus 162 ---~~~l~~l~~~~~~~~livDea~~~~~~~~---~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~ 230 (393)
+++|.++|+++ +++||+||+|..+.+.. +. ..+.+++++||||.+ |+||+|+||++++ +++++.+.
T Consensus 198 ~e~l~~l~~la~~~-~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~-g~~GlRiG~ii~~-~~l~~~l~ 274 (410)
T PRK06290 198 KEFYEEVVDFAKEN-NIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAY-NMTGWRLAFVVGN-ELIVKAFA 274 (410)
T ss_pred HHHHHHHHHHHHHc-CeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhc-CCchhheEeEEeC-HHHHHHHH
Confidence 57778889999 99999999999865431 11 124569999999999 6999999999997 88888887
Q ss_pred HHHHhcCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 231 FLQNSMGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
.....+....+...+..+...++. +...++++.+++..+.+.|+..
T Consensus 275 ~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (410)
T PRK06290 275 TVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV 323 (410)
T ss_pred HHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 776655544444444444444433 3344556667777888888765
No 55
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.1e-34 Score=273.18 Aligned_cols=278 Identities=18% Similarity=0.216 Sum_probs=204.2
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCC
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAG 97 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~g 97 (393)
.+.++ +.|+||+++++.+.+++.+.... ..+|++.+..+||++||++++.+ ++|++|+|+++ + .++.+++++|
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~~---~~~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~~g 105 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWLD---HALYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAG 105 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHHHh---cCcCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCC
Confidence 45677 89999999998887766543221 23567788899999999999987 79999999887 6 6667788999
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC-
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH- 172 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~- 172 (393)
|.|+++.|+|+ .|...++..|++++.++.+ |++++++.+.++++++++++||||||.+++.+++.++++..
T Consensus 106 d~vlv~~P~y~----~~~~~~~~~g~~v~~v~~~~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~ 181 (366)
T PRK01533 106 DNIVTAGATFP----QYRHHAIIEGCEVKEVALNNGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGIS 181 (366)
T ss_pred CEEEEcCCcHH----HHHHHHHHcCCEEEEeecCCCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCC
Confidence 99999999998 4778888999999999875 78999998888899999999999999999977777776642
Q ss_pred CCcEEEEeCccCcccccC----CC----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHH
Q psy12791 173 PDILLVLDNTFLTAYYQK----SL----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFD 244 (393)
Q Consensus 173 ~~~~livDea~~~~~~~~----~~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (393)
++.++|+||+|.++.... .+ ..++.++++||||.+ |+||+|+||++++ +++++.++.... ....+...
T Consensus 182 ~~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~l~GlRiG~~i~~-~~~~~~l~~~~~--~~~~~~~~ 257 (366)
T PRK01533 182 ENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAY-GLASFRVGYAVGH-EELIEKLNVVRL--PFNVSSLA 257 (366)
T ss_pred CCCEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHh-cChHHHHhHHhCC-HHHHHHHHHhcC--CCCcCHHH
Confidence 245788899998754321 11 124679999999999 7999999999997 889998876653 23456666
Q ss_pred HHHHHhccCCH---HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHH
Q psy12791 245 CWLVTRGLKTL---PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIF 321 (393)
Q Consensus 245 ~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
+.++...++.. ...++...++...+.++++.+ ++. +..+ .++++++.++ +. ..+
T Consensus 258 q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~-~~~~-----------------~~nf~~~~~~-~~---~~~ 314 (366)
T PRK01533 258 QKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIP-FYQS-----------------QTNFIFLPVE-NG---GEI 314 (366)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-cCCC-----------------cCcEEEEeCC-CH---HHH
Confidence 66666666542 223334445566666777654 221 1111 2678999884 32 344
Q ss_pred HHhcCccccccc
Q psy12791 322 LESLLIFRCAES 333 (393)
Q Consensus 322 ~~~l~~~~~~~~ 333 (393)
.+++...++.+.
T Consensus 315 ~~~l~~~GI~Vr 326 (366)
T PRK01533 315 YEACAHAGFIIR 326 (366)
T ss_pred HHHHHHCCcEEc
Confidence 555544454443
No 56
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.1e-34 Score=271.01 Aligned_cols=328 Identities=19% Similarity=0.222 Sum_probs=227.1
Q ss_pred CCCCccceeeccCCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccH
Q psy12791 6 QDTAFATKAVHIGSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSG 83 (393)
Q Consensus 6 ~~~~~~~~~~~~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G 83 (393)
|+.+....+...|....++++ +.|+||+++++.+.+++.+.+.. ..+|+++...+||+++|++++.+ ++|++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~---~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G 80 (356)
T PRK08056 4 HGGNIREAATVLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDC---AERYPDVEYRHLHQALARHHQVPASWILAGNG 80 (356)
T ss_pred CCccHHHHHHHhCCChhhEEEeccccCCCCCCHHHHHHHHHHHHh---cccCcCccHHHHHHHHHHHhCcChhhEEECCC
Confidence 455555555666777777888 89999999998887766543222 33566677899999999999986 78999999
Q ss_pred HHH-HHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CH-HHHHhhcCCCCcEEEEecCCCCc
Q psy12791 84 LGA-VTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KI-ENLIKYIKPNTKMVWIENPTNPL 156 (393)
Q Consensus 84 ~~a-l~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~-~~l~~~l~~~~~~v~l~~p~npt 156 (393)
+++ +..+...+.+|+ ++++.|+|. .|...++..|++++.++.+ ++ +++.+.+.+++++|++++|||||
T Consensus 81 a~~~l~~~~~~l~~g~-viv~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~k~v~l~~p~NPT 155 (356)
T PRK08056 81 ETESIFAVVSGLKPRR-AMIVTPGFA----EYRRALQQVGCEIRRYSLREADGWQLTDAILEALTPDLDCLFLCTPNNPT 155 (356)
T ss_pred HHHHHHHHHHHhCCCC-EEEeCCCcH----HHHHHHHHcCCeEEEEecccccCCCccHHHHHhccCCCCEEEEeCCcCCC
Confidence 887 544433447776 677889987 4777788999999999864 22 35556667789999999999999
Q ss_pred ccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC----C-C-CCcCcEEEEcccccccCCCCceEEEEEecChHHHH
Q psy12791 157 MTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK----S-L-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQA 227 (393)
Q Consensus 157 G~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~----~-~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~ 227 (393)
|.+++ +++|.++|+++ ++++|+||+|.++..+. + + ..+++++++||||++ |++|+|+||++++++++.+
T Consensus 156 G~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~v~~~~~~~~ 233 (356)
T PRK08056 156 GLLPERQLLQAIAERCKSL-NIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFY-AIPGLRLGYLVNSDDAAVA 233 (356)
T ss_pred CCCCCHHHHHHHHHHHHhc-CCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhc-cCcchhheeeecCCHHHHH
Confidence 99999 77788899999 99999999998765322 1 1 134679999999999 6999999999986567777
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCc
Q psy12791 228 RLKFLQNSMGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTS 304 (393)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~ 304 (393)
.++.... ....+...+..+...++. ....++...++++.+.+.|+.++++. +. +. .+
T Consensus 234 ~l~~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~-~~----------------~~ 293 (356)
T PRK08056 234 RMRRQQM--PWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLT-VW-PG----------------RA 293 (356)
T ss_pred HHHHhCC--CCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-Ec-CC----------------CC
Confidence 7764332 223344444444444432 22334556677778888887765543 22 21 25
Q ss_pred ceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHH
Q psy12791 305 GMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLD 384 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~ 384 (393)
.++|+.++.+ ...+.+.+...++.+..|..+. +..+++||+|++. .++-+.|.
T Consensus 294 ~~~~~~~~~~---~~~~~~~l~~~gI~v~~~~~f~---------------------~~~~~~iRis~~~---~~~~~~l~ 346 (356)
T PRK08056 294 NYLFLRCERP---DIDLQRALLTQRILIRSCANYP---------------------GLDSRYYRVAIRS---AAENERLL 346 (356)
T ss_pred cEEEEEcCCC---hHHHHHHHHHCCeEEEECCCCC---------------------CCCCCEEEEEEcC---HHHHHHHH
Confidence 6788888422 2344455444466665554321 1125799999985 23345666
Q ss_pred HHHHHh
Q psy12791 385 QALRKA 390 (393)
Q Consensus 385 ~al~~~ 390 (393)
++|+++
T Consensus 347 ~~l~~~ 352 (356)
T PRK08056 347 AALRNV 352 (356)
T ss_pred HHHHHH
Confidence 666554
No 57
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-34 Score=273.63 Aligned_cols=318 Identities=14% Similarity=0.132 Sum_probs=219.3
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhC------C-C-cEEEeccHHHH-H-HHH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEE------A-K-HGLCYSSGLGA-V-TAV 90 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~------~-~-~~i~~~~G~~a-l-~~~ 90 (393)
.+.+| +.+.+++.+++.+.+.+.........|+ |+..+..+||+++|++++ . + ++|++|+|+++ + .++
T Consensus 32 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~-y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~ 110 (399)
T PRK07681 32 HKMIDLSIGNPDMPPADFVREEMVHTANQKESYG-YTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLP 110 (399)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCC-CCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHH
Confidence 35667 7778887777666555433222122232 234678899999999874 2 2 68999999886 6 666
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC--
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD-- 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~-- 161 (393)
.+++++||.|++++|+|+. +...++..|++++.++.+ |++++++.+.+++++|++++||||||.+++
T Consensus 111 ~~~~~~Gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~ 186 (399)
T PRK07681 111 MVYANPGDIILVPDPGYTA----YETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHED 186 (399)
T ss_pred HHhCCCCCEEEECCCCccc----hHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHH
Confidence 7788999999999999984 777788999999999874 578888888778999999999999999999
Q ss_pred -HHHHHHHHHhCCCcEEEEeCccCcccccC----CC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHH
Q psy12791 162 -VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKF 231 (393)
Q Consensus 162 -~~~l~~l~~~~~~~~livDea~~~~~~~~----~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~ 231 (393)
+++|.++|+++ +++||+||+|.++.+.. ++ .....++++||||.+ |++|+|+||++++ +++++.+..
T Consensus 187 ~~~~i~~~a~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~GlRiG~~i~~-~~l~~~~~~ 263 (399)
T PRK07681 187 FFKEVIAFAKKH-NIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSY-SLAGSRIGYMIGN-EEIVRALTQ 263 (399)
T ss_pred HHHHHHHHHHHc-CeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeeccccc-CCccceeEEEecC-HHHHHHHHH
Confidence 77788889999 99999999999865432 11 113569999999999 6999999999987 889888877
Q ss_pred HHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceE
Q psy12791 232 LQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGML 307 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 307 (393)
.........+...+..+...++. +.+.++.+.++...+.+.|+.+ ++. +..|. .+.++
T Consensus 264 ~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~----------------~g~f~ 325 (399)
T PRK07681 264 FKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWN-VDKPA----------------GSMFV 325 (399)
T ss_pred HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCC----------------eeeEE
Confidence 66544444555555544444433 3334455566677778888765 332 22222 25678
Q ss_pred EEEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHH
Q psy12791 308 SFYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQA 386 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a 386 (393)
|+.+++. .....+.+.+ +..++.+.+|..+.. ..++++|+|++. +++.++...+.
T Consensus 326 ~~~l~~~-~~~~~~~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRis~~~--~~~~~~~~l~~ 381 (399)
T PRK07681 326 WAEIPKG-WTSLSFAYALMDRANVVVTPGHAFGP---------------------HGEGFVRIALVQ--DEEVLQQAVEN 381 (399)
T ss_pred EEECCCC-CCHHHHHHHHHHhCCEEEeCChhhCc---------------------CCCCeEEEEecC--CHHHHHHHHHH
Confidence 8888531 1223344443 224566666544310 014799999983 34444444455
Q ss_pred HHH
Q psy12791 387 LRK 389 (393)
Q Consensus 387 l~~ 389 (393)
|++
T Consensus 382 l~~ 384 (399)
T PRK07681 382 IRN 384 (399)
T ss_pred HHH
Confidence 544
No 58
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-34 Score=269.09 Aligned_cols=301 Identities=17% Similarity=0.182 Sum_probs=214.8
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCC-
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAG- 97 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~g- 97 (393)
+.++ +.|+||+++++.+ . ...+.+||++...+||+++|+++|++ ++|++|+|+++ + .++..++++|
T Consensus 32 ~~~~l~~ne~~~~~~~~~------~---~~~~~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~ 102 (354)
T PRK04635 32 GDIWINANESPFNNEYKL------D---LARLNRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQ 102 (354)
T ss_pred CcEEeeCCCCCCCCChhh------h---hHHhccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCC
Confidence 4466 8999999998543 1 12466778888899999999999987 79999999987 6 6666778888
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 172 (393)
|+|+++.|+|. .|...++..|++++.+|.+ |++.++ .+ +++++|+++|||||||.+++.+++.++++..
T Consensus 103 d~vlv~~P~y~----~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~-~~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~ 176 (354)
T PRK04635 103 DSIACFGPTYG----MYAISAETFNVGVKALPLTADYQLPLDYIE-QL-DGAKLVFICNPNNPTGTVIDRADIEQLIEMT 176 (354)
T ss_pred CeEEEcCCChH----HHHHHHHHcCCEEEEEecCCCCCCCHHHHH-hc-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhC
Confidence 89999999998 4777788899999999875 566665 33 5799999999999999999999999999885
Q ss_pred CCcEEEEeCccCcccccCCC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHH
Q psy12791 173 PDILLVLDNTFLTAYYQKSL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWL 247 (393)
Q Consensus 173 ~~~~livDea~~~~~~~~~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (393)
++++||+||+|.++...... ...+.++++||||++ |++|+|+||++++ +++++.+......++ .+...+..
T Consensus 177 ~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~-~l~GlRlG~~i~~-~~~~~~l~~~~~~~~--~~~~~~~~ 252 (354)
T PRK04635 177 PDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAF-ALAGARCGFTLAN-EELIEILMRVIAPYP--VPLPVSEI 252 (354)
T ss_pred CCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHh-hhhHHHHhhhhCC-HHHHHHHHhhcCCCC--CCHHHHHH
Confidence 47999999999876532111 124568999999999 7999999999997 888888765443322 23333333
Q ss_pred HHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHH
Q psy12791 248 VTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFL 322 (393)
Q Consensus 248 ~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
+...+. .+...++...++++.+.+.|+.++.+. + .+. .+.++++.++ +.++ +.
T Consensus 253 a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~----------------~g~f~~~~~~-~~~~---~~ 310 (354)
T PRK04635 253 ATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAK-V-LEG----------------NGNYVLAKFD-DVDA---VF 310 (354)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCC----------------CCcEEEEECC-CHHH---HH
Confidence 333332 233344556667778888888765432 2 222 1567888884 3333 33
Q ss_pred HhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 323 ESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 323 ~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+.+...++.+..++. + ..++++|+|++ +.++++++.++|++.
T Consensus 311 ~~l~~~gv~v~~~~~------~-----------------~~~~~lRis~~---~~e~~~~l~~al~~~ 352 (354)
T PRK04635 311 KALWDAGIVARAYKD------P-----------------RLANCIRFSFS---NRAETDKLIGLIRNQ 352 (354)
T ss_pred HHHHHCCEEEEECCC------C-----------------CCCCeEEEEeC---CHHHHHHHHHHHHHh
Confidence 333333444432110 0 01579999986 567788999888764
No 59
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=4.8e-34 Score=265.59 Aligned_cols=313 Identities=21% Similarity=0.187 Sum_probs=213.4
Q ss_pred CCCCCCccceeeccCCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEecc
Q psy12791 4 LPQDTAFATKAVHIGSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSS 82 (393)
Q Consensus 4 ~~~~~~~~~~~~~~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~ 82 (393)
|.|++.+...+...|..+.++++ ++|+||+++++.. +.. ....+||++. .+||++||++++. ++|++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~i~l~~ne~p~~~~~~~---~~~-----~~~~~yp~~~-~~Lr~~ia~~~~~-~~I~it~ 71 (330)
T PRK05664 2 LEHGGRLRRAAQRYGIPLADWLDLSTGIAPWPWPVPA---IPA-----DAWARLPETD-DGLEAAARAYYGA-PQLLPVA 71 (330)
T ss_pred CCCCchHHHHHHHcCCCHHHheeecCCcCCCCCCCcc---cCH-----HHHHhCCCCh-HHHHHHHHHHhCC-CCEEECc
Confidence 34566665555556776667788 9999999887431 111 2245566655 8999999999996 5799999
Q ss_pred HHHH-HHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC
Q psy12791 83 GLGA-VTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD 161 (393)
Q Consensus 83 G~~a-l~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 161 (393)
|+++ |..+. .+.+||+|++++|+|+ .+...++..|++++.++.++ +++.+ ++++++++++||||||.+++
T Consensus 72 Gs~~al~~~~-~~~~gd~v~v~~P~y~----~~~~~~~~~g~~~~~v~~~~---~~~~~-~~~~~v~l~nP~NPTG~~~s 142 (330)
T PRK05664 72 GSQAAIQALP-RLRAPGRVGVLSPCYA----EHAHAWRRAGHQVRELDEAE---VEAAL-DSLDVLVVVNPNNPTGRRFD 142 (330)
T ss_pred CHHHHHHHHH-HccCCCEEEEcCCChH----HHHHHHHHcCCeEEEechhh---Hhhhh-cCCCEEEEeCCcCCCCCccC
Confidence 9887 54333 4689999999999998 57888899999999998754 44444 36889999999999999999
Q ss_pred HH---HHHHHHHhCCCcEEEEeCccCcccccCC---CC-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH
Q psy12791 162 VK---AISAVVKQHPDILLVLDNTFLTAYYQKS---LP-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN 234 (393)
Q Consensus 162 ~~---~l~~l~~~~~~~~livDea~~~~~~~~~---~~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~ 234 (393)
.+ +|.++|+++ +++||+||+|.++....+ +. .++.++++||||.+ |+||+|+||++++ +++++.+.....
T Consensus 143 ~~~l~~l~~~~~~~-~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~-gl~GlRiG~~v~~-~~l~~~~~~~~~ 219 (330)
T PRK05664 143 PARLLAWHARLAAR-GGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFF-GLAGARLGFVLAE-PALLRALAELLG 219 (330)
T ss_pred HHHHHHHHHHHHhc-CCEEEEECCcccCCCcccccccccCCCEEEEeeccccc-cCCCcceEEEEeC-HHHHHHHHHhcC
Confidence 55 455556788 999999999986542111 11 23569999999999 7999999999997 888888876544
Q ss_pred hcCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEE
Q psy12791 235 SMGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYV 311 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
.+ ..+...+..+...++. ....++...++++.+.+.|+.+. + .+. .+...++|+.+
T Consensus 220 ~~--~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~----~~~--------------~~~~~f~~~~~ 278 (330)
T PRK05664 220 PW--TVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHG-L----TPA--------------GGCALFQWVRT 278 (330)
T ss_pred CC--CCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCC-C----ccc--------------CCcceEEEEec
Confidence 32 2334444444444433 23345555667777888887642 1 011 12235677777
Q ss_pred cCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 312 NGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 312 ~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+ +. +.+.+.+...++.+... . .++++|||++. +.+..+++.++|+++.
T Consensus 279 ~-~~---~~~~~~l~~~gi~v~~f---~-----------------------~~~~iRis~~~--~~~~~~~l~~al~~~~ 326 (330)
T PRK05664 279 E-DA---AALHEFLARRGILTRLF---E-----------------------QPASLRFGLPA--DEADWARLDQALLAYR 326 (330)
T ss_pred C-CH---HHHHHHHHHCCeEEEEC---C-----------------------CCCeEEEECCC--CHHHHHHHHHHHHHHH
Confidence 3 33 34444444434444210 0 14689999995 3445677777777664
No 60
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-34 Score=271.78 Aligned_cols=313 Identities=16% Similarity=0.195 Sum_probs=228.3
Q ss_pred CCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--cEEEeccHHHH-H-HHHHHhcC
Q psy12791 21 PDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK--HGLCYSSGLGA-V-TAVTHLLS 95 (393)
Q Consensus 21 ~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~--~~i~~~~G~~a-l-~~~~~~~~ 95 (393)
..++++ +.++||+++++.+.+.+.+.+.. ..+..|++++..+||+++|++++.+ ++|++++|+++ + .++..+++
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~ 103 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAE-VALNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAK 103 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhc-cccccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcC
Confidence 456777 89999999999988877654321 2244556677899999999999975 48999999987 5 55566789
Q ss_pred CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHH
Q psy12791 96 AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVV 169 (393)
Q Consensus 96 ~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~ 169 (393)
+||+|++++|+|. .+...++..|++++.++.+ |++++++.+. .++++|++++||||||.+++.+++.+++
T Consensus 104 ~gd~vlv~~P~y~----~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~ 179 (356)
T PRK04870 104 PGATVLAPEPGFV----MYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERII 179 (356)
T ss_pred CCCEEEECCCCHH----HHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 9999999999998 4777888999999999875 6889998885 4799999999999999999999999999
Q ss_pred HhCCCcEEEEeCccCcccccCC---C-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHH
Q psy12791 170 KQHPDILLVLDNTFLTAYYQKS---L-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDC 245 (393)
Q Consensus 170 ~~~~~~~livDea~~~~~~~~~---~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (393)
+.. ++++|+||+|..+..... + ..++.++++|||| + |++|+|+||++++ +++++.++.....+ ..+...+
T Consensus 180 ~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~-~~~GlRiG~~i~~-~~~i~~~~~~~~~~--~~~~~~q 253 (356)
T PRK04870 180 EAA-PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-L-GLAGLRLGYLAGH-PAWIAELDKVRPPY--NVNVLTQ 253 (356)
T ss_pred HHC-CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-h-hhHHHhhhhhhCC-HHHHHHHHHccCCC--cCCHHHH
Confidence 988 889999999987543211 1 1245799999999 7 7999999999997 88888877654322 3444444
Q ss_pred HHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHH
Q psy12791 246 WLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFL 322 (393)
Q Consensus 246 ~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
..+...++. +...+++..+++..+.+.|+.++++. + .|. .++++|+.++ +. ..+.
T Consensus 254 ~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~----------------~~~~~~~~~~-~~---~~~~ 311 (356)
T PRK04870 254 ATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVT-V-FPS----------------AANFILVRVP-DA---AAVF 311 (356)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCC----------------CCeEEEEECC-CH---HHHH
Confidence 433333332 34445566677777888888766542 2 222 2568899884 33 3444
Q ss_pred HhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 323 ESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 323 ~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+.+...++.+..|..+. +..++++|+|++ +.++.+.|.++|+++
T Consensus 312 ~~l~~~gI~v~~~~~f~---------------------~~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 312 DGLKTRGVLVKNLSGMH---------------------PLLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred HHHHHCCEEEEECCCCC---------------------CCCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 55555566655543321 012579999998 456677888888764
No 61
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-33 Score=265.74 Aligned_cols=304 Identities=18% Similarity=0.194 Sum_probs=216.3
Q ss_pred CCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCC-C
Q psy12791 24 WRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAG-D 98 (393)
Q Consensus 24 ~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~g-d 98 (393)
.++ ++|+||+++++.. .....+|+++...+||+++|++++.+ ++|++++|+++ + .++..++.+| |
T Consensus 33 ~~~~~~ne~~~~~~~~~----------~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~ 102 (364)
T PRK04781 33 DVWLNANESAWANPADP----------DASTRRYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRD 102 (364)
T ss_pred CEEeeCCCCCCCCChhh----------cchhccCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCC
Confidence 345 7999999887531 11245677777899999999999987 78999999886 6 6666777888 7
Q ss_pred eEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--------CHHHHHhh-cCCCCcEEEEecCCCCcccccCHHHHHHHH
Q psy12791 99 HIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--------KIENLIKY-IKPNTKMVWIENPTNPLMTVFDVKAISAVV 169 (393)
Q Consensus 99 ~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--------d~~~l~~~-l~~~~~~v~l~~p~nptG~~~~~~~l~~l~ 169 (393)
.|++++|+|+ .+...++..|++++.++.+ |++++.+. ..+++++|++++||||||.+++.+++.+++
T Consensus 103 ~vlv~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~ 178 (364)
T PRK04781 103 AVLVTPPVFG----MYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERAL 178 (364)
T ss_pred eEEEcCCChH----HHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHH
Confidence 9999999987 4666778889999999862 45666544 356799999999999999999998888888
Q ss_pred HhC-CCcEEEEeCccCcccccCC-C----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHH
Q psy12791 170 KQH-PDILLVLDNTFLTAYYQKS-L----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPF 243 (393)
Q Consensus 170 ~~~-~~~~livDea~~~~~~~~~-~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (393)
+.. ++++||+||+|.++..... . ..++.++++||||.+ |+||+|+||++++ +++++.++.....++ .+..
T Consensus 179 ~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~-gl~GlRvGy~v~~-~~l~~~l~~~~~~~~--~~~~ 254 (364)
T PRK04781 179 QALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAH-ALAAARIGSLIAN-AELIAVLRRCQAPYP--VPTP 254 (364)
T ss_pred HhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhc-ccccceeeeeeCC-HHHHHHHHhccCCCC--CCHH
Confidence 763 2789999999998754221 1 124679999999999 7999999999997 899998887665443 2333
Q ss_pred HHHHHHhccCC-----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHH
Q psy12791 244 DCWLVTRGLKT-----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEET 318 (393)
Q Consensus 244 ~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
.+..+...++. ..+.+++..++++.+.+.|+.++++..+ .|. .+.++|+.++ +.
T Consensus 255 ~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~p~----------------~g~f~~~~~~-~~--- 313 (364)
T PRK04781 255 CAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRV-YPS----------------QGNFLLVRFD-DA--- 313 (364)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE-CCC----------------CCcEEEEEcC-CH---
Confidence 33333333322 3344555667778888888877654323 232 2678899884 33
Q ss_pred HHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 319 RIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 319 ~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.+.+.+...++.+..|..+. + .++++||+++. .++-+++.++|+++.
T Consensus 314 ~~~~~~l~~~gI~v~~~~~~~---------------------~-~~~~~Ris~~~---~~~~~~l~~al~~~~ 361 (364)
T PRK04781 314 EAAFQALLAAGVVVRDQRAAP---------------------R-LSDALRITLGT---PEQNDRVLAALQRTQ 361 (364)
T ss_pred HHHHHHHHHCCeEEeeCCCCC---------------------C-CCCeEEEeCCC---HHHHHHHHHHHHHHH
Confidence 344555555566665543210 1 15799999985 344467777776553
No 62
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.7e-34 Score=270.59 Aligned_cols=307 Identities=16% Similarity=0.140 Sum_probs=212.8
Q ss_pred CCCCCC-C-CCCCCCccCCeeeeCCCCCCCCCccccCCC-CchHHHHHHHHHHHh----CC---C-cEEEeccHHHH-H-
Q psy12791 21 PDQWRS-Q-CVIPPIILSTTFKQNTPGQPPQGFEYSRSN-NPTRRNLERCIASLE----EA---K-HGLCYSSGLGA-V- 87 (393)
Q Consensus 21 ~~~~~~-~-~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~-~~~~~~lr~~la~~~----~~---~-~~i~~~~G~~a-l- 87 (393)
+.+.++ + .+.+|+.+++.+.+.+.+.+... ....|+ ..+..+||+++|+++ |. + ++|++|+|+++ +
T Consensus 38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~ 116 (405)
T PRK06207 38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERG-GVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF 116 (405)
T ss_pred CCCceecCCcCCCCCCCCHHHHHHHHHHHhcC-CCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 445555 3 45556666666665544332211 112333 346778888887765 64 2 67999999776 7
Q ss_pred HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----------CHHHHHhhcCCCCcEEEEecCCCCcc
Q psy12791 88 TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----------KIENLIKYIKPNTKMVWIENPTNPLM 157 (393)
Q Consensus 88 ~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----------d~~~l~~~l~~~~~~v~l~~p~nptG 157 (393)
.++..++++||+|++++|+|+. +...++..|++++.++.+ |++++++.+.+++++|++++||||||
T Consensus 117 ~~~~~l~~~Gd~Vlv~~P~y~~----~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG 192 (405)
T PRK06207 117 LAVAATVARGDKVAIVQPDYFA----NRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAG 192 (405)
T ss_pred HHHHHhcCCCCEEEEeCCCchh----HHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCC
Confidence 6777789999999999999984 667788899999888753 68899998888899999999999999
Q ss_pred cccC---HHHHHHHHHhCCCcEEEEeCccCcccccC----CC-----CCcCcEEEEcccccccCCCCceEEEEEecChHH
Q psy12791 158 TVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSL 225 (393)
Q Consensus 158 ~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~----~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~ 225 (393)
.+++ +++|.++|+++ +++||+||+|..+.+.. ++ ..++.++++||||.+ |+||+|+||++++ +++
T Consensus 193 ~~~s~e~l~~l~~~a~~~-~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~-~lpGlRiG~ii~~-~~l 269 (405)
T PRK06207 193 VVYSAEEIAQIAALARRY-GATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTE-SLSGYRLGVAFGS-PAI 269 (405)
T ss_pred cCCCHHHHHHHHHHHHHc-CCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhc-cCcccceEEEEcC-HHH
Confidence 9998 67788889999 99999999999865421 11 123559999999999 6999999999987 889
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcC
Q psy12791 226 QARLKFLQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWS 301 (393)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~ 301 (393)
++++......+....+...+..+...++. +..+++...+++..+.+.|+.++++. +..|.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~--------------- 333 (405)
T PRK06207 270 IDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVF-VRAPQ--------------- 333 (405)
T ss_pred HHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCC---------------
Confidence 99888776655555554444444444432 44456666666777778887654432 22222
Q ss_pred CCcceEEEEEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecC
Q psy12791 302 GTSGMLSFYVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV 373 (393)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 373 (393)
.+.++|+.++........+.+.+. ..++.+.+|..|.. ..++++|||++.
T Consensus 334 -gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~---------------------~~~~~~Ris~~~ 384 (405)
T PRK06207 334 -AGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSP---------------------HTADSIRLNFSQ 384 (405)
T ss_pred -eeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCC---------------------CCCCeEEEEecC
Confidence 245789988521112344555553 34666666654320 115799999996
No 63
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.8e-34 Score=267.20 Aligned_cols=309 Identities=18% Similarity=0.244 Sum_probs=223.3
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCCC
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAGD 98 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~gd 98 (393)
++++ ++|+||+++++.+.+++.+.+. .+..|++.+..++|+++|++++.+ ++|++|+|+++ + .++.+++++||
T Consensus 30 ~~i~l~~n~~~~~~~~~v~~a~~~~~~---~~~~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd 106 (359)
T PRK03158 30 KIVKLASNENPYGPSPKVKEAIAAHLD---ELALYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGT 106 (359)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHH---HhhcCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHhCCCC
Confidence 5677 8999999888877766544322 234456778999999999999976 78999999887 6 55667789999
Q ss_pred eEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC-C
Q psy12791 99 HIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH-P 173 (393)
Q Consensus 99 ~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~ 173 (393)
.|++++|+|+. +...+...|++++.++.+ |++++++.+.++++++++++||||||.+++.++|.++++.. .
T Consensus 107 ~v~~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~ 182 (359)
T PRK03158 107 NTVMAEPTFSQ----YRHNAIIEGAEVREVPLKDGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPS 182 (359)
T ss_pred EEEEcCCCHHH----HHHHHHHcCCeEEEEecCCCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCC
Confidence 99999999984 666777889999999875 78899888888899999999999999999999999998873 2
Q ss_pred CcEEEEeCccCcccccCC--C------CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHH
Q psy12791 174 DILLVLDNTFLTAYYQKS--L------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDC 245 (393)
Q Consensus 174 ~~~livDea~~~~~~~~~--~------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (393)
++++|+||+|.++.+... . ..++.++++||||.+ |++|+|+||++++ +++++.++.....+ ..+...+
T Consensus 183 ~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~~v~~-~~~~~~~~~~~~~~--~~~~~~q 258 (359)
T PRK03158 183 HVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAY-GLAALRVGYGIAS-EELIEKLNIARPPF--NTTRIAQ 258 (359)
T ss_pred CcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhh-cCcchhhehhcCC-HHHHHHHHHhcCCC--CCCHHHH
Confidence 899999999987654321 1 124679999999999 7999999999997 88888887655432 3456666
Q ss_pred HHHHhccCCH---HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHH
Q psy12791 246 WLVTRGLKTL---PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFL 322 (393)
Q Consensus 246 ~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
..+...++.. ....+...++...+.+.|+.. ++. + .|. .+.++++.+..+ ...+.
T Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~-~~~----------------~g~~i~~~~~~~---~~~~~ 316 (359)
T PRK03158 259 YAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLF-Y-YPS----------------QTNFIFVDTGRD---ANELF 316 (359)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-e-CCC----------------cCcEEEEECCCC---HHHHH
Confidence 6665555542 222333344555666666654 222 1 222 246788877322 23344
Q ss_pred HhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 323 ESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 323 ~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+.+...++.+..|..+. .++++||+++ +.++.+.+.++|+++
T Consensus 317 ~~l~~~gv~v~~g~~f~-----------------------~~~~iRi~~~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 317 EALLKKGYIVRSGAALG-----------------------FPTGVRITIG---LKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHHCCeEEeeCCCCC-----------------------CCCeEEEecC---CHHHHHHHHHHHHHh
Confidence 44443466666554321 1479999988 555667777777764
No 64
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.2e-34 Score=268.68 Aligned_cols=280 Identities=16% Similarity=0.208 Sum_probs=199.2
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhC--------CC-cEEEeccHHHH-H-HHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEE--------AK-HGLCYSSGLGA-V-TAV 90 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~--------~~-~~i~~~~G~~a-l-~~~ 90 (393)
..++ ++|+||+.+++.+.+.+.+.+.......+|++++..+||+++|++++ ++ ++|++|+|+++ + .++
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~ 108 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLL 108 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHH
Confidence 3556 89999999998888776543222212345667788999999999987 44 68999999887 6 556
Q ss_pred HHhcCCCC-eEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcC----CCCcEEEEecCCCCcccc
Q psy12791 91 THLLSAGD-HIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIK----PNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 91 ~~~~~~gd-~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~----~~~~~v~l~~p~nptG~~ 159 (393)
.+++.+|| .|++++|+|. .|...++..|++++.++.+ |++++++++. .++++|++++||||||.+
T Consensus 109 ~~~~~~g~~~Vlv~~P~y~----~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~ 184 (374)
T PRK02610 109 IATCLGGEGSILVAEPTFS----MYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNP 184 (374)
T ss_pred HHHcCCCCCeEEEcCCChH----HHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCC
Confidence 66777786 8999999998 4788889999999998864 6788888775 479999999999999999
Q ss_pred cCHHHHHHHHHh-CCCcEEEEeCccCcccccCCC----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH
Q psy12791 160 FDVKAISAVVKQ-HPDILLVLDNTFLTAYYQKSL----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN 234 (393)
Q Consensus 160 ~~~~~l~~l~~~-~~~~~livDea~~~~~~~~~~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~ 234 (393)
++.+++.++++. + +++||+||+|.++...... ...+.++++||||.+ |+||+|+||++++ +++++.+.....
T Consensus 185 ~s~~~l~~l~~~~~-~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~-g~~GlRiG~~v~~-~~l~~~l~~~~~ 261 (374)
T PRK02610 185 LTAAELEWLRSLPE-DILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAF-RLAAHRVGYAIGH-PELIAVLEKVRL 261 (374)
T ss_pred CCHHHHHHHHhccC-CcEEEEeccccccCccchHHHHhcCCCEEEEEecchhc-cCcccceeeeecC-HHHHHHHHHhcC
Confidence 998888777653 4 8999999999876432211 123568999999999 7999999999987 888888876653
Q ss_pred hcCCCCCHHHHHHHHhccCCH---HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEE
Q psy12791 235 SMGVVPSPFDCWLVTRGLKTL---PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYV 311 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
.+ ..+...+.++...++.. ...+++..+++..+.+.|+.++++. + .|. .+.++|+.+
T Consensus 262 ~~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~p~----------------~g~f~~~~l 321 (374)
T PRK02610 262 PY--NLPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLR-V-WPS----------------AANFLYLRL 321 (374)
T ss_pred CC--CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-e-CCC----------------cceEEEEeC
Confidence 33 23445555555555443 2233444455566777777665542 2 232 256789988
Q ss_pred cCCHHHHHHHHHhcCcccc
Q psy12791 312 NGGAEETRIFLESLLIFRC 330 (393)
Q Consensus 312 ~~~~~~~~~~~~~l~~~~~ 330 (393)
+. ......+.+.+...++
T Consensus 322 ~~-~~~~~~~~~~l~~~gi 339 (374)
T PRK02610 322 SQ-DAALAALHQALKAQGT 339 (374)
T ss_pred CC-CCCHHHHHHHHHHCCE
Confidence 52 2233445555443333
No 65
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=9.9e-34 Score=266.03 Aligned_cols=325 Identities=17% Similarity=0.228 Sum_probs=224.2
Q ss_pred CCCccceeeccCCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHH
Q psy12791 7 DTAFATKAVHIGSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGL 84 (393)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~ 84 (393)
++.+...+...|....+.+| +.++||+++++.+.+.+.+... ...+|+++...+||+++|++++.+ ++|++|+|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~---~~~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga 80 (354)
T PRK06358 4 GGNINEIAREKGLTKNMILDFSANINPLGVPESLKQAITENLD---KLVEYPDPDYLELRKRIASFEQLDLENVILGNGA 80 (354)
T ss_pred CccHHHHHHHhCCCccceEEecCCCCCCCCCHHHHHHHHHHHH---hhhcCCCccHHHHHHHHHHHhCCChhhEEECCCH
Confidence 33333333334544445678 8899999888777776654422 244566777889999999999987 799999999
Q ss_pred HH-HHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCc
Q psy12791 85 GA-VTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPL 156 (393)
Q Consensus 85 ~a-l~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~npt 156 (393)
++ +..+...+.+ +.|++++|+|+ .|...++..|++++.++.+ | +++.+.+.++++++++++|||||
T Consensus 81 ~~~l~~~~~~~~~-~~v~i~~P~y~----~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPt 154 (354)
T PRK06358 81 TELIFNIVKVTKP-KKVLILAPTFA----EYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPT 154 (354)
T ss_pred HHHHHHHHHHhCC-CcEEEecCChH----HHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCC
Confidence 87 5444333444 68999999998 4777788899999998764 3 34555566679999999999999
Q ss_pred ccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC---C----C-CCcCcEEEEcccccccCCCCceEEEEEecChHH
Q psy12791 157 MTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK---S----L-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSL 225 (393)
Q Consensus 157 G~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~---~----~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~ 225 (393)
|.+++ +++|.++|+++ ++++|+||+|..+.+.. + . ..++.++++||||.+ |+||+|+||++++++.+
T Consensus 155 G~~~~~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-gl~G~RiG~lv~~~~~~ 232 (354)
T PRK06358 155 GQLISKEEMKKILDKCEKR-NIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFF-AIPGLRLGYGLTSNKNL 232 (354)
T ss_pred CCccCHHHHHHHHHHHHhc-CCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhc-cCcchhheeeecCCHHH
Confidence 99998 77778888899 99999999998766432 1 1 124569999999999 79999999999865778
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCC
Q psy12791 226 QARLKFLQNSMGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSG 302 (393)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 302 (393)
.+.+...... ...+...+.++...++. +...++...++++.+.+.|+.++++. +..|.
T Consensus 233 ~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~~---------------- 293 (354)
T PRK06358 233 AEKLLQMREP--WSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIK-VYKPS---------------- 293 (354)
T ss_pred HHHHHHhCCC--CcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-EcCCc----------------
Confidence 8877665442 33345555555555543 24445566677778888887665532 22222
Q ss_pred CcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHH
Q psy12791 303 TSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIAD 382 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~ 382 (393)
++++|+.++. . ..+.+.+...++.+..|..+. +..+++|||+++.... -+.
T Consensus 294 -g~f~~~~~~~-~---~~~~~~l~~~gI~v~~~~~f~---------------------~~~~~~iRls~~~~~~---~~~ 344 (354)
T PRK06358 294 -VNFIFFKLEK-P---IDLRKELLKKGILIRSCSNYR---------------------GLDENYYRVAVKSRED---NKK 344 (354)
T ss_pred -ceEEEEEcCc-h---HHHHHHHHHCCeEEEECCCCC---------------------CCCCCEEEEEeCCHHH---HHH
Confidence 5688998852 2 345555444566666654431 1125899999976432 234
Q ss_pred HHHHHHHh
Q psy12791 383 LDQALRKA 390 (393)
Q Consensus 383 l~~al~~~ 390 (393)
|.++|+++
T Consensus 345 l~~~l~~~ 352 (354)
T PRK06358 345 LLKALEVI 352 (354)
T ss_pred HHHHHHHH
Confidence 55555443
No 66
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.7e-33 Score=268.14 Aligned_cols=303 Identities=14% Similarity=0.088 Sum_probs=207.5
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCC--CccccCCCCchHHHHHHHHHHHh----C--CC-c-EEEeccHHHH-H-HH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQ--GFEYSRSNNPTRRNLERCIASLE----E--AK-H-GLCYSSGLGA-V-TA 89 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~--~~~y~~~~~~~~~~lr~~la~~~----~--~~-~-~i~~~~G~~a-l-~~ 89 (393)
+.++ +.+++|+.+++.+.+.+.+.+.. ...|. +..+..+||+++|+++ | ++ + +|++|+|+++ + .+
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~ 108 (388)
T PRK07366 31 ELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYL--LFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHL 108 (388)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCC--CCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHH
Confidence 4567 78889988777666655433211 22232 3467889999999987 4 33 5 6999999886 6 66
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC-
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD- 161 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~- 161 (393)
+..++++||.|++++|+|+. +...++..|++++.++.+ |++++.+.+.++++++++++||||||.+++
T Consensus 109 ~~~l~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~ 184 (388)
T PRK07366 109 PLAVLNPGDFALLLDPGYPS----HAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPL 184 (388)
T ss_pred HHHhCCCCCEEEEcCCCCcc----hHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCH
Confidence 67788999999999999984 777788899999998874 466777777677999999999999999998
Q ss_pred --HHHHHHHHHhCCCcEEEEeCccCcccccCC-----C-CC----cCcEEEEcccccccCCCCceEEEEEecChHHHHHH
Q psy12791 162 --VKAISAVVKQHPDILLVLDNTFLTAYYQKS-----L-PW----GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 162 --~~~l~~l~~~~~~~~livDea~~~~~~~~~-----~-~~----~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~ 229 (393)
+++|.++|+++ +++||+||+|.++.+... + .. .+.++++||||.+ |+||+|+||++++ +++++.+
T Consensus 185 ~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-g~~GlRiG~~v~~-~~li~~l 261 (388)
T PRK07366 185 SFFQEAVAFCQQH-DLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSY-NMGGFRIGFAIGN-AQLIQAL 261 (388)
T ss_pred HHHHHHHHHHHHc-CeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeeccccc-CCcchhheehcCC-HHHHHHH
Confidence 55677788999 999999999998764321 1 11 2358899999999 7999999999987 8899988
Q ss_pred HHHHHhcCCCC-CHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcc
Q psy12791 230 KFLQNSMGVVP-SPFDCWLVTRGL---KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSG 305 (393)
Q Consensus 230 ~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~ 305 (393)
......+..+. +...+.....-. +.+...++.+.+++..+.+.|+.+ ++. +..|. .+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~----------------~g~ 323 (388)
T PRK07366 262 RQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GWP-VPLPE----------------ATM 323 (388)
T ss_pred HHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCC----------------eeE
Confidence 77666544333 222222211111 223444556667777788888765 221 22232 256
Q ss_pred eEEEEEcCCH-HHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecC
Q psy12791 306 MLSFYVNGGA-EETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV 373 (393)
Q Consensus 306 ~~~~~~~~~~-~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 373 (393)
++|+.+++.. .....+.+.+ +..++.+.+|..+.. ..++++||+++.
T Consensus 324 f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRi~~~~ 372 (388)
T PRK07366 324 YVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGK---------------------SGEGYVRFALVH 372 (388)
T ss_pred EEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCc---------------------CCCCeEEEEecC
Confidence 7899885310 1123344333 344566666544310 114799999984
No 67
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.7e-34 Score=268.26 Aligned_cols=319 Identities=15% Similarity=0.228 Sum_probs=220.1
Q ss_pred ccCCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEe-ccHHHH-H-HHH
Q psy12791 16 HIGSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCY-SSGLGA-V-TAV 90 (393)
Q Consensus 16 ~~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~-~~G~~a-l-~~~ 90 (393)
..|..+.++++ +.|.||+++++.+.+++.+... .+.+|+++...++|+++|++++.+ +.+++ ++|+++ + .++
T Consensus 28 ~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~---~~~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~ 104 (361)
T PRK00950 28 EYGIDPESIIKLGSNENPLGPSPKAVEAIEKELS---KIHRYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLM 104 (361)
T ss_pred HhCCCccceEEccCCCCCCCCCHHHHHHHHHHHH---hhcCCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHH
Confidence 33555557888 8899999988887666544322 234566677799999999999986 67777 899887 5 555
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHH
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAI 165 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l 165 (393)
..++++||+|++++|+|+ .+...++..|++++.++.+ |++++++.+.++++++++++|+||||.++|.+++
T Consensus 105 ~~~~~~gd~vlv~~p~y~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l 180 (361)
T PRK00950 105 RTFIDPGDEVIIPTPTFS----YYEISAKAHGAKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDI 180 (361)
T ss_pred HHhcCCCCEEEEcCCChH----HHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHH
Confidence 667789999999999997 4666678889999988753 6888998888789999999999999999999999
Q ss_pred HHHHHhCCCcEEEEeCccCcccccC--CC--CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCC
Q psy12791 166 SAVVKQHPDILLVLDNTFLTAYYQK--SL--PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPS 241 (393)
Q Consensus 166 ~~l~~~~~~~~livDea~~~~~~~~--~~--~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (393)
.++|+++ ++++|+||+|..+.... ++ ..++.++++||||.+ |++|+|+||++++ +++++.++.....++ .+
T Consensus 181 ~~l~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~~~~~-~~~~~~~~~~~~~~~--~~ 255 (361)
T PRK00950 181 RKILEST-DALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVF-GLAGLRIGYGFVP-EWLIDYYMRAKTPFS--LT 255 (361)
T ss_pred HHHHHHC-CcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhh-cCchhhcchhcCC-HHHHHHHHHhcCCCC--CC
Confidence 9999999 99999999998754211 11 124568999999999 6999999999997 888887776554433 34
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHH
Q psy12791 242 PFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIF 321 (393)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
...+..+...++... .+++..+..+...+.+.+.-.+. + .+. .+.++|+.+.+ .....+
T Consensus 256 ~~~~~~a~~~l~~~~-~~~~~~~~~~~~r~~l~~~l~~~-~-~~~----------------~~~~i~~~~~~--~~~~~~ 314 (361)
T PRK00950 256 RLSQAAAIAALSDKE-YIEKSIEHGIKSREYLYNELPFK-V-YPS----------------EANFVLVDVTP--MTAKEF 314 (361)
T ss_pred HHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhhcCee-E-CCC----------------cceEEEEECCC--CCHHHH
Confidence 445444444444321 23333333333333332211111 1 121 24678888832 223444
Q ss_pred HHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 322 LESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 322 ~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+.+...++.+.+|..+. +..+++||+|++ +.++++.+.++|+++.
T Consensus 315 ~~~l~~~gv~v~~~~~f~---------------------~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 315 CEELLKRGVIVRDCTSFR---------------------GLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred HHHHHHCCEEEeeCCccC---------------------CCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 444443455555443210 112579999998 4556788888887653
No 68
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-33 Score=263.32 Aligned_cols=313 Identities=17% Similarity=0.200 Sum_probs=220.4
Q ss_pred CCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCC
Q psy12791 21 PDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSA 96 (393)
Q Consensus 21 ~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~ 96 (393)
+++++| +.|+||+++++.+.+++.+... ...+|+++...+||+++|++++.+ ++|++|+|+++ + .++.+++++
T Consensus 35 ~~~~i~l~~~~~~~~~~~~~~~al~~~~~---~~~~Y~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~ 111 (371)
T PRK05166 35 VPRIAKLGSNENPLGPSPAVRRAFADIAE---LLRLYPDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRP 111 (371)
T ss_pred CcceEEcCCCCCCCCCCHHHHHHHHHHHH---HhhcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCC
Confidence 446778 8999999988877766543211 234566655568999999999976 78999999887 6 556677899
Q ss_pred CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHh
Q psy12791 97 GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQ 171 (393)
Q Consensus 97 gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~ 171 (393)
||.|+++.|+|+. +...++..|++++.++.+ |++++++.+.+++++|+++|||||||.+++.+++.++++.
T Consensus 112 gd~vli~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~ 187 (371)
T PRK05166 112 GDRVVTLYPSFPL----HEDYPTMMGARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDA 187 (371)
T ss_pred CCEEEEcCCChHH----HHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 9999999999983 666778899999999874 6889999888889999999999999999998888888775
Q ss_pred C-CCcEEEEeCccCcccccCC-------CC--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCC
Q psy12791 172 H-PDILLVLDNTFLTAYYQKS-------LP--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPS 241 (393)
Q Consensus 172 ~-~~~~livDea~~~~~~~~~-------~~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (393)
. +++++|+||+|.++..... .. ..+.++++||||.+ |++|+|+||++++++++.+.++.....+ ..+
T Consensus 188 ~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~-~l~GlRiG~~i~~~~~l~~~~~~~~~~~--~~~ 264 (371)
T PRK05166 188 TPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAY-GLAGLRVGYGLVSDPELVGLLDRVRTPF--NVN 264 (371)
T ss_pred CCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhh-hcchhheeeeecCCHHHHHHHHHhccCC--CCC
Confidence 3 3789999999997663211 11 12469999999999 6999999998876588888886655433 234
Q ss_pred HHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHH
Q psy12791 242 PFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEET 318 (393)
Q Consensus 242 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
...+..+...+.. ++..++...++++.+.+.|+.+ ++. + .|. .+.++|+.++.+ .
T Consensus 265 ~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~p~----------------~g~fl~~~~~~~---~ 322 (371)
T PRK05166 265 GAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYR-I-APS----------------RANFLFFDARRP---A 322 (371)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCe-e-CCC----------------cCCEEEEeCCCC---H
Confidence 4444444443332 3334555666777788888765 222 2 222 256788887422 2
Q ss_pred HHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 319 RIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 319 ~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.+.+.+...++.+..|.. + + .+++|||+++.. +..+.+.++|+.+.
T Consensus 323 ~~l~~~l~~~gi~v~p~~~------~----------------~-~~~~iRi~~~~~---~~~~~l~~~l~~i~ 369 (371)
T PRK05166 323 SAVAEALLRQGVIVKPWKQ------P----------------G-FETFIRVSIGSP---EENDHFVAALDKVL 369 (371)
T ss_pred HHHHHHHHHCCeEEecCCC------C----------------C-CCCeEEEEcCCH---HHHHHHHHHHHHHh
Confidence 3344444333555554421 0 0 158999999953 33456666666554
No 69
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-33 Score=261.73 Aligned_cols=309 Identities=18% Similarity=0.226 Sum_probs=219.2
Q ss_pred CC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCCCeE
Q psy12791 25 RS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAGDHI 100 (393)
Q Consensus 25 ~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~gd~v 100 (393)
++ +.++||+.+++.+.+++.+.+.. ..+.+|+++...+||+++|++++.+ ++|++++|+++ + .++..++++||+|
T Consensus 25 ~~l~~~~~~~~~p~~~~~a~~~~~~~-~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~V 103 (351)
T PRK14807 25 YKMDANETPFELPEEVIKNIQEIVKS-SQVNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDVV 103 (351)
T ss_pred eEccCCCCCCCCCHHHHHHHHHHhhc-CcccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCEE
Confidence 45 78899998888887776443221 2345566677889999999999986 78999999887 6 6666778999999
Q ss_pred EEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCC
Q psy12791 101 ISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPD 174 (393)
Q Consensus 101 l~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 174 (393)
++++|+|.. +...++..|++++.++.+ |++++++.+.+ ++++|++++|+||||.+++.+++.++++++ +
T Consensus 104 lv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~-~ 178 (351)
T PRK14807 104 IYPHPSFAM----YSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKS-R 178 (351)
T ss_pred EEeCCChHH----HHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhC-C
Confidence 999999983 666778899999998874 67889888865 799999999999999999999999999998 8
Q ss_pred cEEEEeCccCcccccCC---C-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHh
Q psy12791 175 ILLVLDNTFLTAYYQKS---L-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTR 250 (393)
Q Consensus 175 ~~livDea~~~~~~~~~---~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (393)
.++|+||+|..+..... . ...+.++++||||.+ |+||+|+||++++ +++++.++..... ...+...+..+..
T Consensus 179 ~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~~GlRiG~~v~~-~~~~~~~~~~~~~--~~~~~~~q~~~~~ 254 (351)
T PRK14807 179 GIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAF-GLAGLRVGYAVAN-ENILKYLNLVKSP--YNINSLSQVIALK 254 (351)
T ss_pred CEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhc-ccchhceeeeecC-HHHHHHHHHccCC--CCcCHHHHHHHHH
Confidence 88999999987542211 1 135679999999999 6999999999997 8888888754432 2234455554444
Q ss_pred ccCC--HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc
Q psy12791 251 GLKT--LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF 328 (393)
Q Consensus 251 ~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (393)
.++. +.+.++...+++..+.+.|+..+++. + .|. .++++|+.++ +.+ .+.+.+...
T Consensus 255 ~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~-~-~~~----------------~~~~~~i~~~-~~~---~~~~~l~~~ 312 (351)
T PRK14807 255 VLRTGVLKERVNYILNERERLIKELSKIPGIK-V-YPS----------------KTNFILVKFK-DAD---YVYQGLLER 312 (351)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CcC----------------CccEEEEEcC-CHH---HHHHHHHHC
Confidence 4432 33444555666677777777655543 2 222 2567888884 433 333333333
Q ss_pred ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 329 RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 329 ~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
++.+..++.. . ..++++|||++.. +..++|.++|+++
T Consensus 313 gV~v~~~~~~-----~-----------------~~~~~iRis~~~~---~~~~~l~~~l~~~ 349 (351)
T PRK14807 313 GILVRDFSKV-----E-----------------GLEGALRITVSSC---EANDYLINGLKEL 349 (351)
T ss_pred CEEEEECCCC-----C-----------------CCCCeEEEEcCCH---HHHHHHHHHHHHh
Confidence 4444321110 0 0157999999853 3345667776654
No 70
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.9e-33 Score=263.35 Aligned_cols=321 Identities=17% Similarity=0.156 Sum_probs=217.2
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCC--CCccccCCCCchHHHHHHH----HHHHhCC----CcEEEeccHHHH-H-HH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPP--QGFEYSRSNNPTRRNLERC----IASLEEA----KHGLCYSSGLGA-V-TA 89 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~--~~~~y~~~~~~~~~~lr~~----la~~~~~----~~~i~~~~G~~a-l-~~ 89 (393)
+.++ +.+.+|+.+++.+.+++.+.+. ....|.. ..+..++|++ +++++|. +++|++++|++. + .+
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~--~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~ 105 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQA--VQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNA 105 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHH
Confidence 4456 7777887777666555433211 1122332 2334445444 4555575 357899999875 6 66
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
+..++++||+|++++|+|.. +...++..|++++.++.+ |++++++.+++++++|++++||||||.+++
T Consensus 106 ~~~~~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~ 181 (389)
T PRK05957 106 ILAITDPGDEIILNTPYYFN----HEMAITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEAL 181 (389)
T ss_pred HHHhcCCCCEEEEeCCCCcC----HHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHH
Confidence 66778999999999999985 445567889999998775 689999999888999999999999999998
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC----CC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL 232 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~----~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~ 232 (393)
+++|.++|+++ |+++|+||+|.++.+.. +. .....++++||||.+ |++|+|+||++++ +++++++...
T Consensus 182 ~~~i~~~a~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~-~~~~~~~~~~ 258 (389)
T PRK05957 182 LRAVNQICAEH-GIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAY-GFASWRIGYMVIP-IHLLEAIKKI 258 (389)
T ss_pred HHHHHHHHHHc-CcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhc-cCccceeEEEecC-HHHHHHHHHH
Confidence 88899999999 99999999999765432 11 123569999999999 7999999999997 8899988877
Q ss_pred HHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEE
Q psy12791 233 QNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLS 308 (393)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 308 (393)
........+...+..+...++. +.+..+++.++++.+.+.|+.++.+..+..|. .+.++|
T Consensus 259 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~----------------gg~~~~ 322 (389)
T PRK05957 259 QDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPAN----------------GAFYCF 322 (389)
T ss_pred HhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCC----------------eeEEEE
Confidence 7655555555555554444432 34455566677777888887655432222121 134578
Q ss_pred EEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHH---HHHHHH
Q psy12791 309 FYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTD---LIADLD 384 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~---~i~~l~ 384 (393)
+.++. ......+.+.+ +..++.+.+|..+.. ..++++|||++..+.++ .++++.
T Consensus 323 ~~~~~-~~~~~~~~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRis~~~~~~~~l~~~~~~l~ 380 (389)
T PRK05957 323 LKVNT-DLNDFELVKQLIREYRVAVIPGTTFGM---------------------KNGCYLRIAYGALQKATAKEGIERLV 380 (389)
T ss_pred EeCCC-CCChHHHHHHHHHHCCEEEccchhhCC---------------------CCCCEEEEEEecCCHHHHHHHHHHHH
Confidence 88752 22234454554 234666666654321 01469999998766543 344455
Q ss_pred HHHHHh
Q psy12791 385 QALRKA 390 (393)
Q Consensus 385 ~al~~~ 390 (393)
+.++++
T Consensus 381 ~~~~~~ 386 (389)
T PRK05957 381 QGLKTI 386 (389)
T ss_pred HHHHhh
Confidence 555444
No 71
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.8e-33 Score=264.99 Aligned_cols=314 Identities=16% Similarity=0.216 Sum_probs=225.6
Q ss_pred CCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCC
Q psy12791 21 PDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSA 96 (393)
Q Consensus 21 ~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~ 96 (393)
..+++| ++|.||+++++.+.+++.+... .+.+|+++...+||+++|++++.+ ++|++|+|+++ + .++..++++
T Consensus 31 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~---~~~~y~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~ 107 (367)
T PRK02731 31 IADIIKLASNENPLGPSPKAIEAIRAAAD---ELHRYPDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAYLGP 107 (367)
T ss_pred CCceEEecCCCCCCCCCHHHHHHHHHHHH---hhcCCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCC
Confidence 346778 8899999988776665544322 245666666789999999999986 78999999887 6 555677889
Q ss_pred CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC
Q psy12791 97 GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 97 gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 172 (393)
||.|++++|+|. .+...++..|++++.++.+ |++++++.+++++++|++++||||||.+++.+++.++++.+
T Consensus 108 gd~vl~~~p~y~----~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 183 (367)
T PRK02731 108 GDEVIYSEHGFA----VYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGV 183 (367)
T ss_pred CCEEEEecCCHH----HHHHHHHHcCCeEEEecccCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhC
Confidence 999999999996 3566677889999999874 78999999888899999999999999999999999998874
Q ss_pred -CCcEEEEeCccCcccccC----CCC----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHH
Q psy12791 173 -PDILLVLDNTFLTAYYQK----SLP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPF 243 (393)
Q Consensus 173 -~~~~livDea~~~~~~~~----~~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (393)
.++++|+||+|..+.... ++. ....++++|+||.+ |++|+|+||++++ +++.+.++.....+. .+..
T Consensus 184 ~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~l~~~-~~~~~~l~~~~~~~~--~~~~ 259 (367)
T PRK02731 184 PPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAY-GLAGLRVGYGIAP-PEIIDALNRVRQPFN--VNSL 259 (367)
T ss_pred CCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhh-cCcccceeeeeCC-HHHHHHHHHccCCCC--CCHH
Confidence 289999999998755321 111 23569999999999 7999999999997 888888876544332 3445
Q ss_pred HHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHH
Q psy12791 244 DCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRI 320 (393)
Q Consensus 244 ~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
.+..+...++. +....+...++...+.+.|+.. ++. + .+. .+.++|+.++ +......
T Consensus 260 ~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~----------------~g~~~~i~~~-~~~~~~~ 319 (367)
T PRK02731 260 ALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLE-Y-IPS----------------VGNFILVDFD-DGKDAAE 319 (367)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCC----------------CceEEEEECC-CCCCHHH
Confidence 55555555543 2223334445556677777654 222 1 121 2578899883 2233445
Q ss_pred HHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 321 FLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 321 ~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.+.+...++.+..+..+ + .+++||+|++ +.++++.+.++|+++.
T Consensus 320 ~~~~L~~~gI~v~~~~~~----------------------~-~~~~iRis~~---~~~e~~~l~~aL~~~~ 364 (367)
T PRK02731 320 AYQALLKRGVIVRPVAGY----------------------G-LPNALRITIG---TEEENRRFLAALKEFL 364 (367)
T ss_pred HHHHHHHCCEEEEeCCCC----------------------C-CCCeEEEecC---CHHHHHHHHHHHHHHH
Confidence 555555445555544321 1 1478999997 4566788888887664
No 72
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=4.1e-33 Score=262.82 Aligned_cols=326 Identities=17% Similarity=0.170 Sum_probs=223.7
Q ss_pred CCCCccceeeccCCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccH
Q psy12791 6 QDTAFATKAVHIGSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSG 83 (393)
Q Consensus 6 ~~~~~~~~~~~~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G 83 (393)
|+......+..-|+.+.+++| +.|+||+++++.+.+++.+.... +..|+++...+||+++|++++++ ++|++|+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~a~~~~~~~---~~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G 82 (360)
T PRK07392 6 HGGNLAWAAAIAGCPPDAILDFSASINPLGPPESVIAAIQSALSA---LRHYPDPDYRELRLALAQHHQLPPEWILPGNG 82 (360)
T ss_pred CCccHHHHHHHcCCCcccEEEeCCcCCCCCCCHHHHHHHHHHHHH---hhcCCCcCHHHHHHHHHHHhCcChhhEEECCC
Confidence 344444334445677777888 89999999998887776544222 44556667789999999999876 78999999
Q ss_pred HHH-HHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----------CHHHHHhhcCCCCcEEEEecC
Q psy12791 84 LGA-VTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----------KIENLIKYIKPNTKMVWIENP 152 (393)
Q Consensus 84 ~~a-l~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----------d~~~l~~~l~~~~~~v~l~~p 152 (393)
+++ +..+...+.+||.|++++|+|. .+...++..|++++.++.+ +++++++.. .++++++++||
T Consensus 83 ~~~~i~~~~~~l~~g~~vlv~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP 157 (360)
T PRK07392 83 AAELLTWAGRELAQLRAVYLITPAFG----DYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNP 157 (360)
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCcH----HHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCC
Confidence 987 6434333457899999999998 4788888999999998874 244444433 46899999999
Q ss_pred CCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC---C-C---C-CcCcEEEEcccccccCCCCceEEEEEecChH
Q psy12791 153 TNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK---S-L---P-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDS 224 (393)
Q Consensus 153 ~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~---~-~---~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~ 224 (393)
|||||.+++.++|.++++++ ++ +|+||+|.++.+.. + . . ..+.++++||||.+ |+||+|+||++++ ++
T Consensus 158 ~NPTG~~~~~~~l~~l~~~~-~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~-~l~GlRiG~~v~~-~~ 233 (360)
T PRK07392 158 HNPTGKLWSREAILPLLEQF-AL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFY-SLPGLRLGYAIAH-PD 233 (360)
T ss_pred CCCCCCCcCHHHHHHHHHHC-CE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhh-cCCchheeeeeCC-HH
Confidence 99999999999999999999 85 66799999875422 1 1 1 23569999999999 6999999999997 77
Q ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHhccCCH---HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcC
Q psy12791 225 LQARLKFLQNSMGVVPSPFDCWLVTRGLKTL---PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWS 301 (393)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~ 301 (393)
+++.+..... ....+...+.++...++.. ....+...+++..+.+.|+.++++. + .++
T Consensus 234 ~~~~~~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~--------------- 294 (360)
T PRK07392 234 RLQRWQQWRD--PWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLT-P-LPS--------------- 294 (360)
T ss_pred HHHHHHhhCC--CCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCC---------------
Confidence 8777765442 2345666666665555542 1223445566777888887665543 1 222
Q ss_pred CCcceEEEEEcCCHHHHHHHHHh-cCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHH
Q psy12791 302 GTSGMLSFYVNGGAEETRIFLES-LLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLI 380 (393)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i 380 (393)
.+.++++.++. ....+... ++..++.+..|..+.. ..++++||+++.....
T Consensus 295 -~~~fl~~~~~~---~~~~l~~~ll~~~gv~v~pg~~f~~---------------------~~~~~iRi~~~~~~~~--- 346 (360)
T PRK07392 295 -AANFLLVQSQG---SALQLQEKLLQQHRILIRDCLSFPE---------------------LGDRYFRVAVRTEAEN--- 346 (360)
T ss_pred -CCCEEEEEcCC---CHHHHHHHHHhhCCEEEEeCCCCCC---------------------CCCCEEEEEeCCHHHH---
Confidence 25678887742 22334433 3444566656544310 1257999999875432
Q ss_pred HHHHHHHHHh
Q psy12791 381 ADLDQALRKA 390 (393)
Q Consensus 381 ~~l~~al~~~ 390 (393)
+.|.++|+++
T Consensus 347 ~~l~~al~~~ 356 (360)
T PRK07392 347 QRLLEALAAI 356 (360)
T ss_pred HHHHHHHHHH
Confidence 3445555443
No 73
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-33 Score=262.16 Aligned_cols=311 Identities=13% Similarity=0.170 Sum_probs=219.0
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCC
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAG 97 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~g 97 (393)
.++++ +.+.||+.+++.+.+++.+.... ...+|++++..+||+++|++++.+ ++|++|+|+++ + .++.+++++|
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~g 101 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGD--DLRLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHD 101 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhh--hhhcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCC
Confidence 46678 89999998887777666543221 234566777899999999999986 78999999887 6 6667788999
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 172 (393)
|+|++++|+|+ .+...++..|++++.++.+ |++++++ .+++|++++||||||.+++.+++.++++.+
T Consensus 102 d~vlv~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~ 173 (353)
T PRK05387 102 RPLLFPDITYS----FYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLAEIERILAAN 173 (353)
T ss_pred CEEEEeCCCHH----HHHHHHHHcCCEEEEeecCCCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhC
Confidence 99999999996 4666678889999998875 5666642 468899999999999999999999999875
Q ss_pred CCcEEEEeCccCcccccCCC----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc-CCCCCHHHHHH
Q psy12791 173 PDILLVLDNTFLTAYYQKSL----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM-GVVPSPFDCWL 247 (393)
Q Consensus 173 ~~~~livDea~~~~~~~~~~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 247 (393)
+++++|+||+|..+...... ...++++++||||.+ |++|+|+||++++ +++++.++...... ....+...+..
T Consensus 174 ~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~GlR~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~q~~ 251 (353)
T PRK05387 174 PDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSR-SLAGLRVGFAIGH-PELIEALNRVKNSFNSYPLDRLAQAG 251 (353)
T ss_pred CCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhh-cchhhhceeeecC-HHHHHHHHHhhccCCCCCcCHHHHHH
Confidence 48999999999764322111 135679999999999 6999999999987 88888887665433 22344555554
Q ss_pred HHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHh
Q psy12791 248 VTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLES 324 (393)
Q Consensus 248 ~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (393)
+...++. +.+.+++..++++.+.+.|+.+ ++. + .|. .+.++++.+++ ...+.+.+.
T Consensus 252 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~----------------~~~~~~~~~~~--~~~~~~~~~ 310 (353)
T PRK05387 252 AIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFE-V-LPS----------------KANFVFARHPS--HDAAELAAK 310 (353)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCC----------------cCcEEEEECCC--CCHHHHHHH
Confidence 4444433 3345556667777788888765 332 2 222 24678888742 123344444
Q ss_pred cCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 325 LLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 325 l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+...++.+...+ .+ ..++++|+|++ +++.++.+.++|+++.
T Consensus 311 l~~~gi~v~~~~------~~-----------------~~~~~iRis~~---~~~~~~~~~~~L~~~~ 351 (353)
T PRK05387 311 LRERGIIVRHFN------KP-----------------RIDQFLRITIG---TDEEMEALVDALKEIL 351 (353)
T ss_pred HHHCCEEEEECC------CC-----------------CCCCeEEEEeC---CHHHHHHHHHHHHHHh
Confidence 443344432110 00 01579999998 3466777777777653
No 74
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=5.6e-33 Score=262.04 Aligned_cols=308 Identities=19% Similarity=0.193 Sum_probs=213.6
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCC
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAG 97 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~g 97 (393)
.+.++ +.|+||+++++.+.+++.+... ...+|+++...+||+++|+++|.+ ++|++|+|+++ + .++..++++|
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~---~~~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~g 119 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAA---LSGRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPT 119 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHH---HhcCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCC
Confidence 35556 8899999999888776654321 234566677889999999999976 78999999886 6 6667788999
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 172 (393)
|+|++++|+|+ .+...++..|++++.++.+ |++++++. .+++++++++|||||||.+++.+++.++++.+
T Consensus 120 d~Vli~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~ 194 (370)
T PRK09105 120 AGLVTADPTYE----AGWRAADAQGAPVAKVPLRADGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEWLLANK 194 (370)
T ss_pred CEEEEeCCChH----HHHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhC
Confidence 99999999998 4677788999999999874 67788766 45789999999999999999999988887653
Q ss_pred -CCcEEEEeCccCcccccCC-CC----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHH
Q psy12791 173 -PDILLVLDNTFLTAYYQKS-LP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCW 246 (393)
Q Consensus 173 -~~~~livDea~~~~~~~~~-~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
.++++|+||+|..+..... .. ..+.++++||||.+ |++|+|+||++++ +++++.+... . ....+...+.
T Consensus 195 ~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~-g~~GlRiG~~v~~-~~~i~~l~~~-~--~~~~~~~~~~ 269 (370)
T PRK09105 195 PAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLY-GMAGMRLGLAAAR-PDLLAKLARF-G--HNPLPVPAAA 269 (370)
T ss_pred CCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhh-cCCccceeeeecC-HHHHHHHHhc-C--CCCcCHHHHH
Confidence 2899999999976432211 11 23569999999999 7999999999997 8888877655 2 2223343433
Q ss_pred HHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHH
Q psy12791 247 LVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLE 323 (393)
Q Consensus 247 ~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
.+...+.. +...++...++++.+.+.|+.+ ++. +..+ .++++.+.++.+. ..+.+
T Consensus 270 aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-----------------~~~f~~~~~~~~~---~~l~~ 327 (370)
T PRK09105 270 AGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYK-CTPS-----------------QANCFMVDVKRPA---KAVAD 327 (370)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCC-cCCC-----------------CCcEEEEeCCCCH---HHHHH
Confidence 34433332 2333455566677777888764 222 1111 2456666663222 33444
Q ss_pred hcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 324 SLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 324 ~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+...++.+ |..+ + ..++++|+|++. ++..+.+.++|+++.
T Consensus 328 ~L~~~gI~v--~~~~-----~-----------------~~~~~~Ris~~~---~~~~~~l~~al~~~~ 368 (370)
T PRK09105 328 AMAKQGVFI--GRSW-----P-----------------IWPNWVRVTVGS---EEEMAAFRSAFAKVM 368 (370)
T ss_pred HHHHCCcEE--ecCC-----C-----------------CCCCeEEEEcCC---HHHHHHHHHHHHHHh
Confidence 433324333 2111 0 015799999983 455778888887654
No 75
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.1e-32 Score=262.34 Aligned_cols=317 Identities=16% Similarity=0.114 Sum_probs=216.0
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHhC----C--C-c-EEEeccHHHH-H-HHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLEE----A--K-H-GLCYSSGLGA-V-TAV 90 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~~----~--~-~-~i~~~~G~~a-l-~~~ 90 (393)
+.++ +.+.+++.+++.+.+.+.+.+.. ..+.+|++ .+..+||+++|++++ . + + .|++|+|+++ + .++
T Consensus 30 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~ 108 (383)
T TIGR03540 30 DVISLGIGDPDLPTPKHIVEALCKAAEN-PENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIP 108 (383)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhC-CCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHH
Confidence 4566 77888877766555544332111 12334544 357889999999863 3 2 3 6888888775 7 666
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC--
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD-- 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~-- 161 (393)
..++++||.|++++|+|+. +...++..|++++.++.+ |++++++.+.+++++|++++||||||.+++
T Consensus 109 ~~~~~~gd~vlv~~P~y~~----~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~ 184 (383)
T TIGR03540 109 LAFVNPGDIVLVPDPGYPV----YRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLK 184 (383)
T ss_pred HHhCCCCCEEEEeCCCCcc----hHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHH
Confidence 7788999999999999985 666778899999988873 578888888888999999999999999999
Q ss_pred -HHHHHHHHHhCCCcEEEEeCccCcccccC--CC-----C--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHH
Q psy12791 162 -VKAISAVVKQHPDILLVLDNTFLTAYYQK--SL-----P--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKF 231 (393)
Q Consensus 162 -~~~l~~l~~~~~~~~livDea~~~~~~~~--~~-----~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~ 231 (393)
+++|.++|+++ ++++|+||+|.++.+.. +. + ....++++||||.+ |++|+|+||++++ +++++.+..
T Consensus 185 ~~~~i~~~a~~~-~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-g~~GlRiG~~i~~-~~l~~~~~~ 261 (383)
T TIGR03540 185 FFKELVEFAKEY-NIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTY-NMTGWRIGMAVGN-ADLIAGLGK 261 (383)
T ss_pred HHHHHHHHHHHc-CEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEeccccc-CCccceeeEEeCC-HHHHHHHHH
Confidence 68888899999 99999999998754421 11 1 13458899999999 7999999999987 888888876
Q ss_pred HHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceE
Q psy12791 232 LQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGML 307 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 307 (393)
.........+...+..+...++. ++..++.+.+++..+.+.|+++ ++. +..|. .+.++
T Consensus 262 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~----------------~~~~~ 323 (383)
T TIGR03540 262 VKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-GID-VEKPK----------------ATFYV 323 (383)
T ss_pred HHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCE-ecCCC----------------cceEE
Confidence 65544444444444444443432 3334555667777888888865 332 22222 13458
Q ss_pred EEEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHH
Q psy12791 308 SFYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQA 386 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a 386 (393)
|+.+++ ......+.+.+ +..++.+..|..+.. ..++++|+|++.. . +.+.++
T Consensus 324 ~~~l~~-~~~~~~~~~~ll~~~gi~v~~g~~f~~---------------------~~~~~~Ris~~~~-~----~~l~~~ 376 (383)
T TIGR03540 324 WVPVPE-GYTSAEFAARLLEETGVVVTPGVGFGE---------------------YGEGYIRISLTVP-D----ERLEEA 376 (383)
T ss_pred EEECCC-CCCHHHHHHHHHHHCCEEEecchhhCc---------------------cCCCeEEEEecCC-H----HHHHHH
Confidence 888852 22234444443 334566655544311 0147999999843 2 366666
Q ss_pred HHHhhc
Q psy12791 387 LRKACK 392 (393)
Q Consensus 387 l~~~~~ 392 (393)
++.+.+
T Consensus 377 l~~l~~ 382 (383)
T TIGR03540 377 VARIKK 382 (383)
T ss_pred HHHHhh
Confidence 665543
No 76
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-32 Score=260.41 Aligned_cols=310 Identities=16% Similarity=0.194 Sum_probs=219.3
Q ss_pred CCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCCCe
Q psy12791 24 WRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAGDH 99 (393)
Q Consensus 24 ~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~gd~ 99 (393)
.++ +.|+||+++++.+.+++.+... ....|+++...+||+++|++++.+ ++|++++|+++ + .++..++++||.
T Consensus 34 ~~~l~~~~~~~~~~~~~~~a~~~~~~---~~~~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~ 110 (369)
T PRK08153 34 RARIGANESGFGPSPSVIAAMREAAA---EIWKYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDP 110 (369)
T ss_pred eeEecCCCCCCCCCHHHHHHHHHHHH---HhhcCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence 346 7899999999888777654422 223455666889999999999986 79999999987 6 555667899999
Q ss_pred EEEcCCCccchHHHHHHhcccCCcEEEeeCCC----CHHHHHhhc-CCCCcEEEEecCCCCcccccCHHHHHHHHHhC-C
Q psy12791 100 IISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----KIENLIKYI-KPNTKMVWIENPTNPLMTVFDVKAISAVVKQH-P 173 (393)
Q Consensus 100 vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~ 173 (393)
|++++|+|+. +...++..|.+++.+|.+ |++++.+.+ .++++++++++||||||.+++.+++.++++.+ .
T Consensus 111 vlv~~p~y~~----~~~~~~~~g~~~~~vp~~~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~ 186 (369)
T PRK08153 111 VVTSLGAYPT----FNYHVAGFGGRLVTVPYRDDREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPE 186 (369)
T ss_pred EEECCCcchH----HHHHHHHcCCeEEEeeCCCCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC
Confidence 9999999984 555667789999988874 677776665 35789999999999999999988888887754 3
Q ss_pred CcEEEEeCccCcccccC---CCC--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHH
Q psy12791 174 DILLVLDNTFLTAYYQK---SLP--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLV 248 (393)
Q Consensus 174 ~~~livDea~~~~~~~~---~~~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (393)
+++||+||+|..+.... ++. ..+.++++||||.+ |++|+|+||++++ +++++.+......+ ..++..+.++
T Consensus 187 ~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-g~~GlRiG~~v~~-~~~~~~l~~~~~~~--~~s~~~q~~~ 262 (369)
T PRK08153 187 TTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAY-GLAGARVGYAIGA-PGTIKAFDKVRNHF--GMNRIAQAAA 262 (369)
T ss_pred CcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhc-cCcchheeeeecC-HHHHHHHHHhhcCC--CCCHHHHHHH
Confidence 78999999999765421 111 23569999999999 7999999999997 88888887666543 3456666655
Q ss_pred HhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhc
Q psy12791 249 TRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESL 325 (393)
Q Consensus 249 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (393)
...++. +...++...++++.+.+.|+..+ +. ..|. .+.++++.+..+.+....+++.+
T Consensus 263 ~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g-~~--~~p~----------------~~~f~~~~~~~~~~~a~~l~~~l 323 (369)
T PRK08153 263 LAALKDQAYLAEVVGKIAAARDRIAAIARANG-LT--PLPS----------------ATNFVAIDCGRDGAFARAVLDGL 323 (369)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-Cc--cCCC----------------cCcEEEEECCCCcccHHHHHHHH
Confidence 555543 22234444556666677776542 21 1122 24677777732334566777766
Q ss_pred Cccccccc-cCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 326 LIFRCAES-LGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 326 ~~~~~~~~-~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
...++.+. +|.. ..++++|+|++ ++++.+.+.++|+++
T Consensus 324 ~~~Gi~v~~p~~~------------------------~~~~~iRis~~---~~~~~~~~~~al~~~ 362 (369)
T PRK08153 324 IARDIFVRMPGVA------------------------PLDRCIRVSCG---PDEELDLFAEALPEA 362 (369)
T ss_pred HHCCeEEeeCCCC------------------------CCCCeEEEecC---CHHHHHHHHHHHHHH
Confidence 55555542 2110 01479999998 456667777777654
No 77
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-33 Score=261.81 Aligned_cols=245 Identities=11% Similarity=0.100 Sum_probs=186.5
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHh----C--CC-cEEEeccHHHH-H-HHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLE----E--AK-HGLCYSSGLGA-V-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~----~--~~-~~i~~~~G~~a-l-~~~~ 91 (393)
..++ +.|+||+.+++.+.+++.+.+.. ...+.+|++++..+||+++|+++ | .+ ++|++|+|+++ + .++.
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~ 106 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQ 106 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHH
Confidence 4467 89999999998888776544221 12345667778899999999998 3 33 78999999887 6 6667
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHH
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAI 165 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l 165 (393)
+++++||.|+++.|+|+ .|...++..|.+++.++.+ |++++++++. .++++|++++||||||.+++.+++
T Consensus 107 ~~~~~gd~v~v~~P~y~----~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l 182 (368)
T PRK03317 107 AFGGPGRTALGFVPSYS----MHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDV 182 (368)
T ss_pred HhcCCCCEEEEeCCChH----HHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHH
Confidence 78899999999999998 4777788899999888753 6888988886 468999999999999999999999
Q ss_pred HHHHHhCCCcEEEEeCccCcccccC-C--CC----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCC
Q psy12791 166 SAVVKQHPDILLVLDNTFLTAYYQK-S--LP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGV 238 (393)
Q Consensus 166 ~~l~~~~~~~~livDea~~~~~~~~-~--~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 238 (393)
.++++.+ ++++|+||+|..+.... + .. .+..++++||||.+ |.+|+|+||++++ +++++.++..... .
T Consensus 183 ~~l~~~~-~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-g~~GlRiG~~~~~-~~~~~~l~~~~~~--~ 257 (368)
T PRK03317 183 EAILDAA-PGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAF-AFAGGRLGYLAAA-PAVVDALRLVRLP--Y 257 (368)
T ss_pred HHHHHHC-CceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhh-ccchhhhhhhhCC-HHHHHHHHhcCCC--C
Confidence 9999999 99999999999764321 1 11 23468999999999 6999999999997 8888888755432 3
Q ss_pred CCCHHHHHHHHhccCCH---HHHHHHHHHHHHHHHHHHhhC
Q psy12791 239 VPSPFDCWLVTRGLKTL---PCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~ 276 (393)
..++..+..+...++.. ...+++..++...+.+.|+.+
T Consensus 258 ~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 298 (368)
T PRK03317 258 HLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL 298 (368)
T ss_pred CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 34556665555555443 223444455666677777654
No 78
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=3.5e-32 Score=259.71 Aligned_cols=305 Identities=14% Similarity=0.121 Sum_probs=209.4
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh----CCC----c-EEEeccHHHH-H-HH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE----EAK----H-GLCYSSGLGA-V-TA 89 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~----~~~----~-~i~~~~G~~a-l-~~ 89 (393)
+.++ +.+.+|+.+++.+.+.+.+.+.. ...|++ .+..+||+++|+++ |.+ + +|++|+|+++ + .+
T Consensus 30 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~ 106 (396)
T PRK09147 30 PPISLSIGEPKHPTPAFIKDALAANLDG---LASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAF 106 (396)
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHhhh---hcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHH
Confidence 4566 77888887776666665443222 334444 45788999999875 532 4 8999999876 7 66
Q ss_pred HHHhcCC---CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 90 VTHLLSA---GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 90 ~~~~~~~---gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
+..++++ ||.|++++|+|+. +...++..|++++.+|.+ |++++++.+.++++++++++||||||.+
T Consensus 107 ~~~l~~~~~~gd~vlv~~P~y~~----~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~ 182 (396)
T PRK09147 107 AQTVIDRDGPGPLVVCPNPFYQI----YEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAV 182 (396)
T ss_pred HHHHcCCCCCCCEEEEcCCCccc----hHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCcc
Confidence 7778899 8999999999984 777788899999999874 5788877776789999999999999999
Q ss_pred cC---HHHHHHHHHhCCCcEEEEeCccCcccccC---C---C---------CCcCcEEEEcccccccCCCCceEEEEEec
Q psy12791 160 FD---VKAISAVVKQHPDILLVLDNTFLTAYYQK---S---L---------PWGVDIVLYSLTKYMNGHSDVVMGATVTN 221 (393)
Q Consensus 160 ~~---~~~l~~l~~~~~~~~livDea~~~~~~~~---~---~---------~~~~di~~~S~sK~~~G~~G~r~G~~~~~ 221 (393)
++ +++|.++|+++ +++||+||+|..+.+.. + . ..++.++++||||.+ |++|+|+||++++
T Consensus 183 ~s~~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~~GlRiG~~~~~ 260 (396)
T PRK09147 183 LPLDDWKKLFALSDRY-GFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRS-NVPGLRSGFVAGD 260 (396)
T ss_pred CCHHHHHHHHHHHHHc-CeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEecccccc-CCccceeeeecCC
Confidence 98 66778888899 99999999999865432 1 0 123569999999999 6999999999997
Q ss_pred ChHHHHHHHHHHHhcCCCCCHHHHHHHHhccC---CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhh
Q psy12791 222 DDSLQARLKFLQNSMGVVPSPFDCWLVTRGLK---TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKS 298 (393)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~ 298 (393)
+++++.+.......+...+...+..+...+. .+...++.+.++++.+.+.|+.+ +. +..|.
T Consensus 261 -~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~p~------------ 324 (396)
T PRK09147 261 -AALLKKFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV--LD-VQLPD------------ 324 (396)
T ss_pred -HHHHHHHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--cC-CCCCC------------
Confidence 8888888766654444555544444333332 23344555666666777777643 11 11222
Q ss_pred hcCCCcceEEEEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC
Q psy12791 299 QWSGTSGMLSFYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE 374 (393)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~ 374 (393)
.+.++|+.++.+ ...+.+.+ +..++.+.+|..++...... ....+++||+++..
T Consensus 325 ----~g~f~~~~~~~~---~~~~~~~ll~~~gv~v~pg~~f~~~~~~~---------------~~~~~~iRi~~~~~ 379 (396)
T PRK09147 325 ----AGFYLWAKVPGD---DTEFARRLYADYNVTVLPGSYLAREAHGV---------------NPGAGRVRIALVAP 379 (396)
T ss_pred ----eeEEEEEECCCC---HHHHHHHHHHhCCEEEeCCccccccccCC---------------CCCCCeEEEEecCC
Confidence 256789988412 23343433 33456666665543210000 01257999999864
No 79
>PRK07324 transaminase; Validated
Probab=100.00 E-value=3.3e-32 Score=257.36 Aligned_cols=274 Identities=19% Similarity=0.262 Sum_probs=196.8
Q ss_pred ccccCCCCchHHHHHHHHHHHhC-CC-cEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEE
Q psy12791 51 FEYSRSNNPTRRNLERCIASLEE-AK-HGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVD 126 (393)
Q Consensus 51 ~~y~~~~~~~~~~lr~~la~~~~-~~-~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~ 126 (393)
..|+. ..+..+||+++|++++ .+ ++|++|+|+++ + .++.+++++||+|+++.|+|.. +...++..|++++
T Consensus 56 ~~Y~~--~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~----~~~~~~~~g~~v~ 129 (373)
T PRK07324 56 LTYGW--IEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQ----LYDIPESLGAEVD 129 (373)
T ss_pred ccCCC--CCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchh----HHHHHHHcCCEEE
Confidence 34543 3567899999999875 33 78888888765 7 7777889999999999999984 6677888999999
Q ss_pred eeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccCCC----
Q psy12791 127 FVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQKSL---- 192 (393)
Q Consensus 127 ~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~~~---- 192 (393)
.++.+ |++++++.+.+++|+|++++||||||.+++ +++|.++|+++ |+++|+||+|....+....
T Consensus 130 ~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~-~~~ii~De~y~~l~~~~~~~s~~ 208 (373)
T PRK07324 130 YWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSV-DAYVLSDEVYRPLDEDGSTPSIA 208 (373)
T ss_pred EEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEccccccccCCCCCChh
Confidence 98863 678898888889999999999999999999 88889999999 9999999999875543211
Q ss_pred C-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH----HHHHHHHHHHH
Q psy12791 193 P-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP----CRLKEHERGSI 267 (393)
Q Consensus 193 ~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 267 (393)
. .+..++++||||.+ |++|+|+||++++ +++++.++........+.+...+.++...++... ..++...++..
T Consensus 209 ~~~~~~I~~~s~SK~~-~~~G~RiG~i~~~-~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~ 286 (373)
T PRK07324 209 DLYEKGISTNSMSKTY-SLPGIRVGWIAAN-EEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLA 286 (373)
T ss_pred hccCCEEEEecchhhc-CCccceeEEEecC-HHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 1 23569999999999 6999999999996 8999988877765444455555555555554432 23344455666
Q ss_pred HHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhc-CccccccccCCccccccCccc
Q psy12791 268 EVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAE 346 (393)
Q Consensus 268 ~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~ 346 (393)
.+.++|+.++.+. +..|. .+..+++.++.. .....|.+++ +..++.+.+|..+.
T Consensus 287 ~l~~~l~~~~~~~-~~~p~----------------gg~~~~i~~~~~-~~~~~~~~~ll~~~gv~v~pg~~F~------- 341 (373)
T PRK07324 287 ILDEWVAKEPRVS-YVKPK----------------AVSTSFVKLDVD-MPSEDFCLKLLKETGVLLVPGNRFD------- 341 (373)
T ss_pred HHHHHHhcCCCce-EECCC----------------ceEEEEEEeCCC-CCHHHHHHHHHHhcCEEEECccccC-------
Confidence 7778887665543 23333 133455555311 2233444443 34456666665431
Q ss_pred ccCCCCChhhHhhcCCCCCeEEEEecCC
Q psy12791 347 MTHKSIPKETRDALGITDNLVRLSVGVE 374 (393)
Q Consensus 347 ~~~~~~~~~~~~~~g~~~~~iRls~~~~ 374 (393)
.++++|||++..
T Consensus 342 ----------------~~~~iRis~~~~ 353 (373)
T PRK07324 342 ----------------LEGHVRIGYCCD 353 (373)
T ss_pred ----------------CCCeEEEEecCC
Confidence 147999999863
No 80
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.5e-32 Score=261.68 Aligned_cols=315 Identities=16% Similarity=0.115 Sum_probs=208.9
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHHh----CC--C-c-EEEeccHHHH-H-HHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASLE----EA--K-H-GLCYSSGLGA-V-TAV 90 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~~----~~--~-~-~i~~~~G~~a-l-~~~ 90 (393)
+.++ +.+.+++.+++.+.+.+...+.. ..+.+| +.++..+||+++|+++ |. + + +|++|+|+++ + .++
T Consensus 33 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~ 111 (389)
T PRK08068 33 DVINLGQGNPDQPTPEHIVEALQEAAEN-PANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELP 111 (389)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhC-CCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHH
Confidence 4456 55544433333444433222111 123345 3567889999999987 42 2 4 7888888765 6 667
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccCH-
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFDV- 162 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~- 162 (393)
..++++||.|++++|+|+. |...++..|++++.++.+ |++++++.+.+++++|++++||||||.+++.
T Consensus 112 ~~~~~~gd~vlv~~P~y~~----~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~ 187 (389)
T PRK08068 112 QCLMNPGDTILVPDPGYPD----YLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKA 187 (389)
T ss_pred HHhCCCCCEEEEcCCCCcc----hHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHH
Confidence 7788999999999999984 677788899999999874 5678888887789999999999999999995
Q ss_pred --HHHHHHHHhCCCcEEEEeCccCcccccC--C---CC----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHH
Q psy12791 163 --KAISAVVKQHPDILLVLDNTFLTAYYQK--S---LP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKF 231 (393)
Q Consensus 163 --~~l~~l~~~~~~~~livDea~~~~~~~~--~---~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~ 231 (393)
++|.++|+++ ++++|+||+|.++.+.. + .. ....++++||||.+ |++|+|+||++++ +++++.+..
T Consensus 188 ~~~~l~~la~~~-~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~-~~l~~~l~~ 264 (389)
T PRK08068 188 FFEETVAFAKKH-NIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTF-NMAGWRVAFAVGN-ESVIEAINL 264 (389)
T ss_pred HHHHHHHHHHHc-CeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhcc-CCccceeEeEecC-HHHHHHHHH
Confidence 5777789999 99999999998754321 1 11 13569999999999 7999999999987 889998877
Q ss_pred HHHhcCCCCCHHHHHHHHhcc----CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcc-e
Q psy12791 232 LQNSMGVVPSPFDCWLVTRGL----KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSG-M 306 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~-~ 306 (393)
....+..+.++..+..+...+ +.+...++.+.++++.+.+.|+++ ++. +..|. ++ +
T Consensus 265 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~-~~~~~-----------------g~~~ 325 (389)
T PRK08068 265 LQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWE-VDAPK-----------------GSFF 325 (389)
T ss_pred HHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCC-----------------eeEE
Confidence 666554444433333333322 223445666667777788888765 222 22122 44 4
Q ss_pred EEEEEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHH
Q psy12791 307 LSFYVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQ 385 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~ 385 (393)
+|+.+++. ...+.+.+.+. ..++.+..|..+.. ..++++|++++.. . +.+.+
T Consensus 326 ~~v~~~~~-~~~~~~~~~l~~~~gi~v~pg~~f~~---------------------~~~~~iRi~~~~~-~----~~l~~ 378 (389)
T PRK08068 326 AWMPVPKG-YTSEQFADLLLEKAHVAVAPGNGFGE---------------------HGEGYVRVGLLTD-E----ERLRE 378 (389)
T ss_pred EEEECCCC-CCHHHHHHHHHHhCCEEEecchHhCc---------------------cCCCeEEEEEcCC-H----HHHHH
Confidence 79988531 12344444443 23555555543310 1157999999853 2 34555
Q ss_pred HHHHhh
Q psy12791 386 ALRKAC 391 (393)
Q Consensus 386 al~~~~ 391 (393)
+++++.
T Consensus 379 al~~l~ 384 (389)
T PRK08068 379 AVERIG 384 (389)
T ss_pred HHHHHH
Confidence 555443
No 81
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-32 Score=257.06 Aligned_cols=315 Identities=13% Similarity=0.160 Sum_probs=213.9
Q ss_pred ceeeccCCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-
Q psy12791 12 TKAVHIGSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V- 87 (393)
Q Consensus 12 ~~~~~~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l- 87 (393)
..+...|..+.++++ +.|+||+++++...+++.+.... ...|++++..+||+++|++++.+ ++|++|+|+++ +
T Consensus 20 ~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~ 96 (357)
T PRK14809 20 EVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAER---VHSYPKASHADLTAALADRWDVSPEQVWLANGGDGALD 96 (357)
T ss_pred HHHHHhCCCccceeEecCCCCCCCCCHHHHHHHHHHHhh---hhcCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHH
Confidence 334444556667888 89999999998776665443222 23455677889999999999976 79999999886 6
Q ss_pred HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCccccc
Q psy12791 88 TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 88 ~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 160 (393)
.++.+++++||.|++++|+|. .+...++..|.+++.++++ +.+++.+.. +++++|++++||||||.++
T Consensus 97 ~~~~~~~~~gd~V~v~~P~y~----~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~ 171 (357)
T PRK14809 97 YLARAMLDPGDTVLVPDPGFA----YYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEI 171 (357)
T ss_pred HHHHHhcCCCCEEEEeCCChH----HHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCC
Confidence 666778899999999999997 3556667788888877663 355555554 3689999999999999999
Q ss_pred CHHHHHHHHHhC-CCcEEEEeCccCcccccCC-C----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH
Q psy12791 161 DVKAISAVVKQH-PDILLVLDNTFLTAYYQKS-L----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN 234 (393)
Q Consensus 161 ~~~~l~~l~~~~-~~~~livDea~~~~~~~~~-~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~ 234 (393)
+.+++.++++.. .+++||+||+|..+..... . ..++.++++||||.+ |++|+|+||++++ +++++.+.....
T Consensus 172 s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~~~~~-~~~~~~~~~~~~ 249 (357)
T PRK14809 172 PLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAY-GLAGLRLGYAVVP-EEWADAYARVNT 249 (357)
T ss_pred CHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHh-cCcchhheeeecC-HHHHHHHHHhCC
Confidence 988888887764 2689999999998654221 1 124569999999999 6999999999997 788888876543
Q ss_pred hcCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEE
Q psy12791 235 SMGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYV 311 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
. ...+...+..+...++. +...++...++...+.+.|... ..|. .+.++++.+
T Consensus 250 ~--~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~------~~~~----------------~g~f~~~~~ 305 (357)
T PRK14809 250 P--FAASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP------TWES----------------AGNFVLAEV 305 (357)
T ss_pred C--CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc------cCCC----------------CCCEEEEEC
Confidence 2 23445555555555543 2222333333344444444321 1111 256788888
Q ss_pred cCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 312 NGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 312 ~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
. +. +.+.+.+...++.+..|..+. .+++|||+++. ++.++...++|+++
T Consensus 306 ~-~~---~~~~~~l~~~gv~v~~g~~f~-----------------------~~~~iRls~~~---~~~~~~~l~~L~~~ 354 (357)
T PRK14809 306 G-DA---SAVAEAAQERGVIVRDCTSFG-----------------------LPECIRITCGT---REETERAVEVLNEV 354 (357)
T ss_pred C-CH---HHHHHHHHHCCEEEEECccCC-----------------------CCCeEEEecCC---HHHHHHHHHHHHHH
Confidence 3 32 344455544466666554321 14799999873 34555555555544
No 82
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=5.4e-33 Score=260.95 Aligned_cols=312 Identities=19% Similarity=0.252 Sum_probs=227.1
Q ss_pred CCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhc
Q psy12791 19 SEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLL 94 (393)
Q Consensus 19 ~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~ 94 (393)
+.+++++| +.+.||+.+++.+.+++.+... ...+|+++...++|+.+|++++.+ ++|++++|+++ + .++..++
T Consensus 16 ~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~---~~~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~ 92 (346)
T TIGR01141 16 LGGKEVIKLNSNENPFGPPPKAKEALRAEAD---KLHRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFL 92 (346)
T ss_pred CCCCceEEccCCCCCCCCCHHHHHHHHHhHH---HhhcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhc
Confidence 44567888 8899999999888877665422 234566677799999999999975 77888888875 6 6666778
Q ss_pred CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHH
Q psy12791 95 SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVV 169 (393)
Q Consensus 95 ~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~ 169 (393)
++||+|++++|+|+ .+...++..|++++.++.+ |++++++.+.+++++|++++|+||||.++|.+++.+++
T Consensus 93 ~~gd~v~~~~p~y~----~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~ 168 (346)
T TIGR01141 93 EPGDAVLVPPPTYS----MYEISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVL 168 (346)
T ss_pred CCCCEEEEcCCCHH----HHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99999999999997 4666678899999999874 78999988888899999999999999999998888888
Q ss_pred HhC-CCcEEEEeCccCccccc-CCCC----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHH
Q psy12791 170 KQH-PDILLVLDNTFLTAYYQ-KSLP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPF 243 (393)
Q Consensus 170 ~~~-~~~~livDea~~~~~~~-~~~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (393)
+.+ .++++|+|++|..+... .+.. .+.+++++|+||++ |.+|+|+||++++ +++.+.++.....+ ..++.
T Consensus 169 ~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~~~-~~~~~~~~~~~~~~--~~~~~ 244 (346)
T TIGR01141 169 ERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAF-GLAGLRIGYAIAN-AEIIDALNKVRAPF--NLSRL 244 (346)
T ss_pred HhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhh-hchhhhceeeecC-HHHHHHHHhccCCC--CCCHH
Confidence 764 38999999999864432 1111 23468899999999 6899999999997 88888887654433 23444
Q ss_pred HHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHH
Q psy12791 244 DCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRI 320 (393)
Q Consensus 244 ~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
.+..+...++. ....+++..+++..+.+.|+.++++. + .|. .+.++++.+++ ..+.
T Consensus 245 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~-~~~----------------~g~~~~~~~~~---~~~~ 303 (346)
T TIGR01141 245 AQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLE-V-YPS----------------DANFVLIRFPR---DADA 303 (346)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCE-E-CCC----------------cCCEEEEecCC---CHHH
Confidence 44444444444 33445666677788888888766543 2 221 25688998853 3445
Q ss_pred HHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 321 FLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 321 ~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
+.+.|...++.+.+|..+. +. ++++|+|++ ++++++.+.++|
T Consensus 304 ~~~~L~~~gI~v~~g~~f~---------------------~~-~~~iRls~~---~~~~i~~~~~~l 345 (346)
T TIGR01141 304 LFEALLEKGIIVRDLNSYP---------------------GL-PNCLRITVG---TREENDRFLAAL 345 (346)
T ss_pred HHHHHHHCCeEEEeCCCcC---------------------CC-CCeEEEecC---CHHHHHHHHHHh
Confidence 5555555566665553321 11 589999987 566777777765
No 83
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-32 Score=259.14 Aligned_cols=314 Identities=16% Similarity=0.112 Sum_probs=212.4
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHhC------CC-cEEEeccHHHH-H-HHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLEE------AK-HGLCYSSGLGA-V-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~~------~~-~~i~~~~G~~a-l-~~~~ 91 (393)
+.++ +.+.+++.+++.+.+.+.+.+.. ...|. +..+..++|+++|++++ .+ ++|++|+|+++ + .++.
T Consensus 33 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~ 110 (387)
T PRK08960 33 DVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYT--AARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASS 110 (387)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccC--CCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHH
Confidence 4455 67777777776666655443221 12332 35678899999999873 33 78889998776 7 6667
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
.++++||+|++++|+|+. +...++..|.+++.++.+ |++++++.+.++++++++++||||||.+++
T Consensus 111 ~~~~~gd~vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~ 186 (387)
T PRK08960 111 LLVDPGKHWLLADPGYPC----NRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDE 186 (387)
T ss_pred HhcCCCCEEEEcCCCCcc----hHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHH
Confidence 788999999999999985 455667778888888763 578899888888999999999999999998
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccCC----CC-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQKS----LP-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM 236 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~~----~~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~ 236 (393)
+++|.++|+++ ++++|+||+|..+.+... .. ....++++||||.+ |++|+|+||++++ +++++.+.......
T Consensus 187 ~~~l~~~~~~~-~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~~~~~-~~~~~~~~~~~~~~ 263 (387)
T PRK08960 187 LAALSQALRAR-GGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYF-GMTGWRLGWLVAP-PAAVPELEKLAQNL 263 (387)
T ss_pred HHHHHHHHHHc-CCEEEEEccccccccCCCCCChhhccCCEEEEeeccccc-CCcccEEEEEEcC-HHHHHHHHHHHhhh
Confidence 55677778999 999999999987654321 11 13568999999999 6999999999998 78888887766555
Q ss_pred CCCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEE
Q psy12791 237 GVVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYV 311 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
....+...+.++...+. .+...++.+.++++.+.+.|+.++ +..+..|. .+.++|+.+
T Consensus 264 ~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~-~~~~~~p~----------------g~~f~~~~~ 326 (387)
T PRK08960 264 YISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELG-FGIAVEPQ----------------GAFYLYADI 326 (387)
T ss_pred ccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcC-CcCCcCCC----------------eeEEEEEec
Confidence 44455555444433332 133345555666777888887653 21111222 245678888
Q ss_pred cCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHH
Q psy12791 312 NGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADL 383 (393)
Q Consensus 312 ~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l 383 (393)
++.......+.+.+ +..++.+.+|..++.. ..++++|++++. +.+.+.+.+
T Consensus 327 ~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~--------------------~~~~~iRi~~~~-~~~~l~~al 378 (387)
T PRK08960 327 SAFGGDAFAFCRHFLETEHVAFTPGLDFGRH--------------------QAGQHVRFAYTQ-SLPRLQEAV 378 (387)
T ss_pred cccCCCHHHHHHHHHHhCCEEEcCchHhCCC--------------------CCCCeEEEEecC-CHHHHHHHH
Confidence 42111234455443 3446666666544210 114799999996 444333333
No 84
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=257.96 Aligned_cols=316 Identities=16% Similarity=0.141 Sum_probs=217.8
Q ss_pred ccceeeccCCCC-CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHhCCC-cEEEeccHHH
Q psy12791 10 FATKAVHIGSEP-DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLEEAK-HGLCYSSGLG 85 (393)
Q Consensus 10 ~~~~~~~~g~~~-~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~~~~-~~i~~~~G~~ 85 (393)
+.....|||++. .+.+| +.|.||+.+++.+.+.+.+.+.. +..|++ .+..++|+++|++++.+ ++|++|+|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~ 85 (349)
T PRK07908 9 LAALRHHGDQDAGPGLLDFAVNVRHDTPPEWLRERLAARLGD---LAAYPSTEDERRARAAVAARHGRTPDEVLLLAGAA 85 (349)
T ss_pred HHHHHhcccccCCCCeEEecCCCCCCCCCHHHHHHHHHHhhH---hhcCCCccchHHHHHHHHHHhCcChhhEEECCCHH
Confidence 455567999994 46778 89999999998877766554322 334544 47889999999999976 7999999988
Q ss_pred H-HHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 86 A-VTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 86 a-l~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
+ +..+.. ++++ .+++..|+|.. +...++..|++++.++.+ |++ .+.+++++++++|||||||.+
T Consensus 86 ~al~~~~~-l~~~-~viv~~P~y~~----~~~~~~~~G~~i~~v~~~~~~~~d~~----~l~~~~~~i~l~np~NPTG~~ 155 (349)
T PRK07908 86 EGFALLAR-LRPR-RAAVVHPSFTE----PEAALRAAGIPVHRVVLDPPFRLDPA----AVPDDADLVVIGNPTNPTSVL 155 (349)
T ss_pred HHHHHHHh-cCCC-eEEEeCCCChH----HHHHHHHcCCEEEeeccCcccCcChh----HhccCCCEEEEcCCCCCCCCC
Confidence 7 644444 5675 56778999984 566778899999999875 233 345578999999999999999
Q ss_pred cCHHHHHHHHHhCCCcEEEEeCccCcccccCC--C---CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH
Q psy12791 160 FDVKAISAVVKQHPDILLVLDNTFLTAYYQKS--L---PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN 234 (393)
Q Consensus 160 ~~~~~l~~l~~~~~~~~livDea~~~~~~~~~--~---~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~ 234 (393)
++.++|.++++ + +.++|+||+|.++....+ + ..++.++++||||.+ |++|+|+||++++ +++++.+.....
T Consensus 156 ~~~~~l~~l~~-~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~-~l~GlRiG~~~~~-~~~~~~~~~~~~ 231 (349)
T PRK07908 156 HPAEQLLALRR-P-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTW-SLAGLRVGYALGA-PDVLARLTRGRA 231 (349)
T ss_pred cCHHHHHHHHh-c-CCEEEEECcchhhccCCccccccccCCCEEEEeeccccc-CCccceeeeeecC-HHHHHHHHhcCC
Confidence 99999999996 4 678889999987543211 1 224568999999999 6999999999987 888888765443
Q ss_pred hcCCCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEE
Q psy12791 235 SMGVVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSF 309 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
.+ ..+...+..+...++ .+...++...++++.+.+.|+.+ ++. +..|. .+.++|+
T Consensus 232 ~~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~----------------~g~~~~~ 291 (349)
T PRK07908 232 HW--PVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GAR-VVDPA----------------AAPFVLV 291 (349)
T ss_pred CC--CccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcE-eccCC----------------CceEEEE
Confidence 32 233333333332222 23344555666777778888765 332 22222 2678999
Q ss_pred EEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 310 YVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
.++ +. +.+.+.++..++.+..|..+. +..+++||+|++. +++++++.++|++
T Consensus 292 ~~~-~~---~~~~~~l~~~gI~v~~g~~f~---------------------~~~~~~vRis~~~---~~~~~~l~~al~~ 343 (349)
T PRK07908 292 RVP-DA---ELLRKRLRERGIAVRRGDTFP---------------------GLDPDYLRLAVRP---RAEVPVLVQALAE 343 (349)
T ss_pred ECC-cH---HHHHHHHHhCCEEEEECCCCC---------------------CCCCCeEEEEeCC---CccHHHHHHHHHH
Confidence 985 32 344445544466666554431 1125899999963 4445566666665
Q ss_pred h
Q psy12791 390 A 390 (393)
Q Consensus 390 ~ 390 (393)
+
T Consensus 344 ~ 344 (349)
T PRK07908 344 I 344 (349)
T ss_pred H
Confidence 4
No 85
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-32 Score=259.67 Aligned_cols=317 Identities=16% Similarity=0.119 Sum_probs=212.2
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh----CC--C-c-EEEeccHHHH-H-HHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE----EA--K-H-GLCYSSGLGA-V-TAV 90 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~----~~--~-~-~i~~~~G~~a-l-~~~ 90 (393)
+.++ +.+.+++.+++.+.+.+.+.+.. ....+|++ .+..+||+++|+++ |. + + .|++|+|+++ + .++
T Consensus 32 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~ 110 (385)
T PRK09276 32 DVISLGIGDPDLPTPDHIIEAMCKAVED-PENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIP 110 (385)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhC-CCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHH
Confidence 4566 77788887766655544332211 11234444 35788999999987 33 2 3 5888899876 7 666
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC--
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD-- 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~-- 161 (393)
..++++||.|++++|+|+. +...++..|++++.++.+ |++++++.+.+++++|++++||||||.+++
T Consensus 111 ~~~~~~gd~Vl~~~P~y~~----~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~ 186 (385)
T PRK09276 111 LAFVNPGDVVLVPDPGYPV----YKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLE 186 (385)
T ss_pred HHhCCCCCEEEEcCCCCcC----hHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHH
Confidence 6788999999999999984 677788899999988763 577888888778999999999999999999
Q ss_pred -HHHHHHHHHhCCCcEEEEeCccCcccccC----CC---C--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHH
Q psy12791 162 -VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL---P--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKF 231 (393)
Q Consensus 162 -~~~l~~l~~~~~~~~livDea~~~~~~~~----~~---~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~ 231 (393)
+++|.++|+++ +++||+||+|..+.+.. ++ + .+..++++||||.+ |++|+|+||++++ +++++.+..
T Consensus 187 ~~~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~i~~-~~l~~~~~~ 263 (385)
T PRK09276 187 FFEEVVDFAKKY-DIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTY-NMTGWRIGFAVGN-ADLIAGLGK 263 (385)
T ss_pred HHHHHHHHHHHC-CcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhc-CCcchhheeeeCC-HHHHHHHHH
Confidence 57888888999 99999999999765421 11 1 23468999999999 7999999999987 888888877
Q ss_pred HHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceE
Q psy12791 232 LQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGML 307 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 307 (393)
.........+...+..+...++. ++..++.+.+++..+.+.|++. ++. +..|. .+.++
T Consensus 264 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~----------------~~~~~ 325 (385)
T PRK09276 264 VKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLE-VEPPK----------------ATFYV 325 (385)
T ss_pred HHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCC----------------cceEE
Confidence 66544444444444444444432 2334455566677778888764 222 21121 13347
Q ss_pred EEEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHH
Q psy12791 308 SFYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQA 386 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a 386 (393)
|+.+++. .....+.+.+ +..++.+..|..+.. ..++++|||++. +. +.+.++
T Consensus 326 ~v~~~~~-~~~~~l~~~ll~~~gi~v~~g~~f~~---------------------~~~~~~Ris~~~-~~----~~l~~~ 378 (385)
T PRK09276 326 WAPVPKG-YTSAEFATLLLDKAGVVVTPGNGFGE---------------------YGEGYFRIALTV-PD----ERIEEA 378 (385)
T ss_pred EEECCCC-CCHHHHHHHHHHhCCEEECCchhhCC---------------------CCCCeEEEEeCC-CH----HHHHHH
Confidence 8888531 1223333333 223555555443210 114799999984 33 255666
Q ss_pred HHHhhc
Q psy12791 387 LRKACK 392 (393)
Q Consensus 387 l~~~~~ 392 (393)
++.+.+
T Consensus 379 l~~l~~ 384 (385)
T PRK09276 379 VERIKK 384 (385)
T ss_pred HHHHhh
Confidence 665543
No 86
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=5.7e-32 Score=258.02 Aligned_cols=304 Identities=12% Similarity=0.089 Sum_probs=212.0
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh--------CCC--cEEEeccHHHH-H-H
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE--------EAK--HGLCYSSGLGA-V-T 88 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~--------~~~--~~i~~~~G~~a-l-~ 88 (393)
+.++ +.+++|+.+++.+.+++.+...... .|++ .+..+||+++|+++ +.+ ++|++|+|+++ + .
T Consensus 29 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~---~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~ 105 (393)
T TIGR03538 29 PPIALSIGEPKHPTPAFVLEALRENLHGLS---TYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFA 105 (393)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHhhccC---CCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHH
Confidence 4556 7889999888777776654432223 3443 45789999999987 233 37999999886 6 6
Q ss_pred HHHHhcCCCCe--EEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 89 AVTHLLSAGDH--IISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 89 ~~~~~~~~gd~--vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
++..++++||. |++++|+|.. |...++..|++++.++.+ |++++++.+.+++++|++++||||||.+
T Consensus 106 ~~~~l~~~gd~~~vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPtG~~ 181 (393)
T TIGR03538 106 FAQAVINPGQAPLVVMPNPFYQI----YEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAV 181 (393)
T ss_pred HHHHHcCCCCcceEEecCCCCcc----hHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCcCcc
Confidence 66778899986 9999999984 677788899999999873 5788888877789999999999999999
Q ss_pred cC---HHHHHHHHHhCCCcEEEEeCccCcccccC---CC------------CCcCcEEEEcccccccCCCCceEEEEEec
Q psy12791 160 FD---VKAISAVVKQHPDILLVLDNTFLTAYYQK---SL------------PWGVDIVLYSLTKYMNGHSDVVMGATVTN 221 (393)
Q Consensus 160 ~~---~~~l~~l~~~~~~~~livDea~~~~~~~~---~~------------~~~~di~~~S~sK~~~G~~G~r~G~~~~~ 221 (393)
++ +++|.++|+++ +++||+||+|..+.+.. +. ...+.++++||||.+ |.+|+|+||++++
T Consensus 182 ~s~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~-~~~GlRvG~~i~~ 259 (393)
T TIGR03538 182 LSLDTLKKLIELADQY-GFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRS-NLPGLRSGFVAGD 259 (393)
T ss_pred cCHHHHHHHHHHHHHC-CEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhc-CCcccceEEEecC
Confidence 99 77888888999 99999999999765431 11 123469999999998 6999999999997
Q ss_pred ChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhh
Q psy12791 222 DDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKS 298 (393)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~ 298 (393)
+++++++.......+...+...+..+...+.. +...++.+.++...+.+.|+.+ +. +..|.
T Consensus 260 -~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~p~------------ 323 (393)
T TIGR03538 260 -AEILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV--LD-LELPD------------ 323 (393)
T ss_pred -HHHHHHHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh--Cc-ccCCC------------
Confidence 88888887666544444455444443333322 3344555666777777777653 11 11222
Q ss_pred hcCCCcceEEEEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecC
Q psy12791 299 QWSGTSGMLSFYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV 373 (393)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 373 (393)
.|.++|+.++.+ ...+.+.+ +..++.+.+|..+...... .....+++|||++.
T Consensus 324 ----gg~f~~~~~~~~---~~~~~~~l~~~~gV~v~pg~~f~~~~~~---------------~~~~~~~~Ris~~~ 377 (393)
T TIGR03538 324 ----AGFYLWPKVPGD---DEAFARALYEEENVTVLPGRFLAREAEG---------------VNPGEGRVRIALVA 377 (393)
T ss_pred ----eeEEEEEECCCC---HHHHHHHHHHHCCEEEeCCccccccccC---------------CCCCCCEEEEEecC
Confidence 256789998512 23455444 3456777777654321000 00125799999986
No 87
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-32 Score=257.78 Aligned_cols=304 Identities=16% Similarity=0.185 Sum_probs=208.1
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCc-hHHHHHHHHHHHhC------CC-cEEEeccHHHH-H-HHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNP-TRRNLERCIASLEE------AK-HGLCYSSGLGA-V-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~lr~~la~~~~------~~-~~i~~~~G~~a-l-~~~~ 91 (393)
+.+| +.+.+++.+++.+.++..+.... ....|+++ +..+||+++|++++ .+ ++|++|+|+++ + .++.
T Consensus 30 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~ 107 (384)
T PRK06348 30 DIIDLSLGDPDLITDESIINAAFEDAKK--GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQ 107 (384)
T ss_pred CcEEcCCCCCCCCCCHHHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHH
Confidence 4567 67777776655544432221111 12334443 56789999999872 33 78999999876 7 6677
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
+++++||+|++++|+|.. +...++..|.+++.++.. |++++++.+.+++++|++++||||||.+++
T Consensus 108 ~~~~~gd~vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~ 183 (384)
T PRK06348 108 SILDPGDEVIIHEPYFTP----YKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKET 183 (384)
T ss_pred HhcCCCCEEEEeCCCCcc----hHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHH
Confidence 789999999999999985 677778889998888752 678999988888999999999999999998
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC---C---CC--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK---S---LP--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ 233 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~---~---~~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~ 233 (393)
+++|.++|+++ +++||+||+|.++.+.. + +. .++.++++||||.+ |+||+|+||++++ +++.+.+....
T Consensus 184 ~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~l~GlRiG~~v~~-~~~~~~~~~~~ 260 (384)
T PRK06348 184 LEEIAKIAIEY-DLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDF-AMTGWRIGYVIAP-DYIIETAKIIN 260 (384)
T ss_pred HHHHHHHHHHC-CeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhcc-CCccccceeeecC-HHHHHHHHHHH
Confidence 67788889999 99999999999875432 1 11 24579999999999 6999999999997 88888887766
Q ss_pred HhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEE
Q psy12791 234 NSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSF 309 (393)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
.......+...+..+...++. +...++.+.++++.+.+.|+.++++. +..|. .+.++|+
T Consensus 261 ~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~-~~~p~----------------gg~~~~~ 323 (384)
T PRK06348 261 EGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLS-LHPPK----------------GSIYAFI 323 (384)
T ss_pred HhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCce-eccCC----------------eeEEEEE
Confidence 654445555555554444433 22334455566677788887655432 22222 1335788
Q ss_pred EEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecC
Q psy12791 310 YVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV 373 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 373 (393)
.++........+.+.+ +..++.+.+|..+.. ..+++||+|++.
T Consensus 324 ~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRi~~~~ 367 (384)
T PRK06348 324 NIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGE---------------------SGEGYIRLACTV 367 (384)
T ss_pred ecccCCCCHHHHHHHHHHhCCEEEcCchhhcc---------------------CCCCeEEEEecC
Confidence 8852111223344333 334566666654321 115799999974
No 88
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=3.9e-32 Score=252.86 Aligned_cols=315 Identities=19% Similarity=0.220 Sum_probs=228.2
Q ss_pred CCCCccceeeccCCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccH
Q psy12791 6 QDTAFATKAVHIGSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSG 83 (393)
Q Consensus 6 ~~~~~~~~~~~~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G 83 (393)
||+.+..++...|.+..+.++ +.+.||+.++ . ... ....+.+|+++...++|+.+|++++.+ +.|++|+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~---~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G 72 (330)
T TIGR01140 1 HGGNLRRAAARYGIPPEDWLDFSTGINPLGPP--V---PPI---PASAWARYPDPEYDELRAAAAAYYGLPAASVLPVNG 72 (330)
T ss_pred CCccHHHHHHHcCCChhheeEccccCCCCCCC--h---hhc---chHHHhhCCCccHHHHHHHHHHHhCCChhhEEECCC
Confidence 577788888889988888888 8888998775 1 111 234577787777899999999999986 89999999
Q ss_pred HHH-HHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC-
Q psy12791 84 LGA-VTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD- 161 (393)
Q Consensus 84 ~~a-l~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~- 161 (393)
+++ +.++..++.+| .|++++|+|.. +...++..|++++.++ |++++++.+ .++++|++++|+||||.+++
T Consensus 73 ~~~~i~~~~~~l~~g-~vl~~~p~y~~----~~~~~~~~g~~~~~~~--d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~ 144 (330)
T TIGR01140 73 AQEAIYLLPRLLAPG-RVLVLAPTYSE----YARAWRAAGHEVVELP--DLDRLPAAL-EELDVLVLCNPNNPTGRLIPP 144 (330)
T ss_pred HHHHHHHHHHHhCCC-eEEEeCCCcHH----HHHHHHHcCCEEEEeC--CHHHHHhhc-ccCCEEEEeCCCCCCCCCCCH
Confidence 887 55555667778 69999999984 6777888999999998 899999888 46889999999999999999
Q ss_pred --HHHHHHHHHhCCCcEEEEeCccCcccccCCC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH
Q psy12791 162 --VKAISAVVKQHPDILLVLDNTFLTAYYQKSL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN 234 (393)
Q Consensus 162 --~~~l~~l~~~~~~~~livDea~~~~~~~~~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~ 234 (393)
+++|.++|+++ |+++|+||+|..+....+. ..+++++++|+||++ |++|+|+||++++ +++++.+.....
T Consensus 145 ~~~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~R~G~i~~~-~~~~~~l~~~~~ 221 (330)
T TIGR01140 145 ETLLALAARLRAR-GGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFF-GLAGLRLGFVVAH-PALLARLREALG 221 (330)
T ss_pred HHHHHHHHHhHhc-CCEEEEECcccccCCccchhhHhccCCCEEEEEecchhh-cCchhhhhheeCC-HHHHHHHHhcCC
Confidence 66677888899 9999999999876543221 125679999999999 6999999999997 778888775543
Q ss_pred hcCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEE
Q psy12791 235 SMGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYV 311 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
.+ ..+...+..+...++. ....+++..++.+.+.+.|+.++.+. + .+. .+.++|+.+
T Consensus 222 ~~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~----------------~~~f~~~~~ 281 (330)
T TIGR01140 222 PW--TVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLE-V-VGG----------------TALFLLVRT 281 (330)
T ss_pred CC--CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCC----------------CCeEEEEEc
Confidence 32 3344455554444443 23345566677778888888765432 1 122 256788888
Q ss_pred cCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 312 NGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 312 ~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
+ +. ..+.+.+...++.+..|..+. +...++||++++..+ +. +.+..+|
T Consensus 282 ~-~~---~~l~~~l~~~gi~v~pg~~f~---------------------~~~~~~iRi~~~~~~--~~-~~~~~~l 329 (330)
T TIGR01140 282 P-DA---AALHEALARRGILIRDFDNFP---------------------GLDPRYLRFALPTDE--EN-DRLEEAL 329 (330)
T ss_pred C-CH---HHHHHHHHHCCEEEEECCCCC---------------------CCCCCEEEEEecCHH--HH-HHHHHhh
Confidence 4 32 234444444456555554431 112579999997544 33 6666655
No 89
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=3.5e-32 Score=255.46 Aligned_cols=296 Identities=19% Similarity=0.203 Sum_probs=206.2
Q ss_pred CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh----CC--C-c-EEEeccHHHH-H-HHHHHhcC
Q psy12791 27 QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE----EA--K-H-GLCYSSGLGA-V-TAVTHLLS 95 (393)
Q Consensus 27 ~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~----~~--~-~-~i~~~~G~~a-l-~~~~~~~~ 95 (393)
+...+++.+++.+.+.+.+.... ...|++ .+..+||+++++++ |. + + +|++|+|+++ + .++..+++
T Consensus 6 ~~g~p~~~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~ 82 (350)
T TIGR03537 6 GTGDPKEPTPPFIRKALIDAVPE---VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFID 82 (350)
T ss_pred cCCCCCCCCCHHHHHHHHHHHhc---cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcC
Confidence 34445555566566555433222 334544 45789999999986 53 2 4 8999999886 6 66667788
Q ss_pred CC---CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---H
Q psy12791 96 AG---DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---V 162 (393)
Q Consensus 96 ~g---d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~ 162 (393)
+| |.|++++|+|.. +...++..|++++.++.+ |++++++++.++++++++++||||||.+++ +
T Consensus 83 ~g~~~d~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~ 158 (350)
T TIGR03537 83 PEEDRRRVIFGTPGYPV----YERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYL 158 (350)
T ss_pred CCCCCceEEEcCCCCcc----hHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHH
Confidence 77 699999999984 777788999999999873 678899888888999999999999999999 7
Q ss_pred HHHHHHHHhCCCcEEEEeCccCcccccCCC------CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc
Q psy12791 163 KAISAVVKQHPDILLVLDNTFLTAYYQKSL------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM 236 (393)
Q Consensus 163 ~~l~~l~~~~~~~~livDea~~~~~~~~~~------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~ 236 (393)
++|.++|+++ ++++|+||+|..+.+..+. ..++.++++|+||.+ |++|+|+||++++ +++.+.++.....+
T Consensus 159 ~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-g~~GlRiG~~~~~-~~~~~~~~~~~~~~ 235 (350)
T TIGR03537 159 KETIAMCREH-GIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRS-GMTGYRSGFVAGD-EKLISFLRKLRANF 235 (350)
T ss_pred HHHHHHHHHc-CcEEEEeccccccccCCCCCchhhcCcCCEEEEeeccccc-CCccccceeeecC-HHHHHHHHHHHHhh
Confidence 8888889999 9999999999875433211 234569999999999 7999999999986 88888888766655
Q ss_pred CCCCCHHHHHHHHhccC---CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC
Q psy12791 237 GVVPSPFDCWLVTRGLK---TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG 313 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
+...+...+..+...+. .+...++.+.++...+.+.|+.. ++. +..|. .+.++|+.+++
T Consensus 236 ~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~-~~~~~----------------g~~~~~~~~~~ 297 (350)
T TIGR03537 236 GVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLE-YLYPD----------------ATFYLWVKVPS 297 (350)
T ss_pred ccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCC----------------eEEEEEEECCC
Confidence 55555444333333332 23445556666777777777754 221 22222 13457888853
Q ss_pred CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEec
Q psy12791 314 GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVG 372 (393)
Q Consensus 314 ~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~ 372 (393)
......+.+.|...++.+..|..+... .++++|++++
T Consensus 298 -~~~~~~l~~~L~~~gv~v~~g~~f~~~---------------------~~~~~Ri~~~ 334 (350)
T TIGR03537 298 -GIDAKDYALRLLENGIVVAPGENFGSG---------------------EEGYVRVALV 334 (350)
T ss_pred -CCCHHHHHHHHHHCCEEEcCchhhCCC---------------------CCCEEEEEec
Confidence 223345555554456666665443110 1579999996
No 90
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=4.4e-32 Score=261.66 Aligned_cols=286 Identities=16% Similarity=0.162 Sum_probs=204.1
Q ss_pred CCC-chHHHHHHHHHHHhCC----CcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee
Q psy12791 56 SNN-PTRRNLERCIASLEEA----KHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV 128 (393)
Q Consensus 56 ~~~-~~~~~lr~~la~~~~~----~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~ 128 (393)
|++ .+..+||++++++++. +++|++|+|+++ + .++.+++++||.|++++|+|+ .+...++..|++++.+
T Consensus 117 Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~----~~~~~~~~~g~~~~~v 192 (431)
T PRK15481 117 YGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFL----SSINMLRYAGFSASPV 192 (431)
T ss_pred cCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcH----HHHHHHHHcCCeEEee
Confidence 444 3467899999999762 358999999886 6 677788999999999999998 4788889999999999
Q ss_pred CCC----CHHHHHhhcCCCCcEEEEe-cCCCCcccccCHH---HHHHHHHhCCCcEEEEeCccCcccccC---CC--CCc
Q psy12791 129 DLR----KIENLIKYIKPNTKMVWIE-NPTNPLMTVFDVK---AISAVVKQHPDILLVLDNTFLTAYYQK---SL--PWG 195 (393)
Q Consensus 129 ~~~----d~~~l~~~l~~~~~~v~l~-~p~nptG~~~~~~---~l~~l~~~~~~~~livDea~~~~~~~~---~~--~~~ 195 (393)
+.+ |++++++++++++++++++ +||||||.+++.+ +|.++|+++++++||+||+|.++.+.. .+ ...
T Consensus 193 ~~~~~g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~ 272 (431)
T PRK15481 193 SVDAEGMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQ 272 (431)
T ss_pred ccCCCCCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCC
Confidence 885 6889998887789999986 9999999999965 889999887689999999999765321 11 224
Q ss_pred CcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC------HHHHHHHHHHHHHHH
Q psy12791 196 VDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT------LPCRLKEHERGSIEV 269 (393)
Q Consensus 196 ~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l 269 (393)
+.++++||||.+ | ||+|+||++++ +++.+.+...........+...+.++...++. +...++.+.++++.+
T Consensus 273 ~vi~~~SfSK~~-~-~GlRiG~~i~~-~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~ 349 (431)
T PRK15481 273 RWALIRSVSKAL-G-PDLRLAFVASD-SATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKL 349 (431)
T ss_pred CEEEEeeecccc-C-CCceeEEEeCC-HHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHH
Confidence 679999999999 7 89999999997 88888886555443334555555555444432 233455666777788
Q ss_pred HHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccC
Q psy12791 270 AKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTH 349 (393)
Q Consensus 270 ~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~ 349 (393)
.+.|+.. ++. +..|. .|.++|+.++.+ ...+.+.+...++.+.+|..|...
T Consensus 350 ~~~L~~~-~~~-~~~p~----------------gg~f~~~~l~~~---~~~~~~~l~~~gV~v~pg~~f~~~-------- 400 (431)
T PRK15481 350 ARALQQY-GIA-IPSPG----------------DGLNLWLPLDTD---SQATALTLAKSGWLVREGEAFGVS-------- 400 (431)
T ss_pred HHHHHHc-CCc-cccCC----------------CeEEEEEECCCC---HHHHHHHHHHCCcEEecCCccccC--------
Confidence 8888764 221 21232 256789998532 234444444456777666554211
Q ss_pred CCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 350 KSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 350 ~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
...+++|||++..+. ++++...+.|.++
T Consensus 401 ------------~~~~~iRis~~~~~~-~~i~~~~~~l~~~ 428 (431)
T PRK15481 401 ------------APSHGLRITLSTLND-AEINRLAADLHQA 428 (431)
T ss_pred ------------CCCCeEEEEcCCCCh-HHHHHHHHHHHHH
Confidence 014689999998664 3344444444443
No 91
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5e-32 Score=257.87 Aligned_cols=318 Identities=17% Similarity=0.192 Sum_probs=215.6
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCC-ccccCCCCchHHHHHHHHHHHh----C--CC-cEEEeccHHHH-H-HHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQG-FEYSRSNNPTRRNLERCIASLE----E--AK-HGLCYSSGLGA-V-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~-~~y~~~~~~~~~~lr~~la~~~----~--~~-~~i~~~~G~~a-l-~~~~ 91 (393)
++++ +.+.+|+.+++.+.+.+.+.+... ..|. +..+..+||+++|+++ | .+ +.|++++|+++ + .++.
T Consensus 25 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~ 102 (382)
T PRK06108 25 GVLPLWFGESDLPTPDFIRDAAAAALADGETFYT--HNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQ 102 (382)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHH
Confidence 5566 788888877777666554432221 2233 2357788999999875 5 33 67888888765 7 6667
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--------CHHHHHhhcCCCCcEEEEecCCCCcccccC--
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--------KIENLIKYIKPNTKMVWIENPTNPLMTVFD-- 161 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~-- 161 (393)
.++++||.|++++|+|+. +...++..|++++.++.+ |++++++.+.+++++|++++||||||.+++
T Consensus 103 ~l~~~gd~vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~ 178 (382)
T PRK06108 103 ALVGPGDEVVAVTPLWPN----LVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRD 178 (382)
T ss_pred HhcCCCCEEEEeCCCccc----hHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHH
Confidence 788999999999999984 566778889999988773 578899888888999999999999999997
Q ss_pred -HHHHHHHHHhCCCcEEEEeCccCccccc-C-C----CC----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH
Q psy12791 162 -VKAISAVVKQHPDILLVLDNTFLTAYYQ-K-S----LP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK 230 (393)
Q Consensus 162 -~~~l~~l~~~~~~~~livDea~~~~~~~-~-~----~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~ 230 (393)
+++|.++|+++ ++++|+||+|..+.+. . . .. ..+.++++||||.+ |++|+|+||++++ +++++.+.
T Consensus 179 ~~~~l~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~~~~~-~~~~~~~~ 255 (382)
T PRK06108 179 DLRAILAHCRRH-GLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNW-AMTGWRLGWLVAP-PALGQVLE 255 (382)
T ss_pred HHHHHHHHHHHC-CcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhc-cCcccceeeeeCC-HHHHHHHH
Confidence 67788889999 9999999999987543 1 1 11 13569999999999 6999999999997 88888887
Q ss_pred HHHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcce
Q psy12791 231 FLQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGM 306 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~ 306 (393)
..........+...+.++...++. +...+++..++.+.+.+.|+.++++. +..|. .+.+
T Consensus 256 ~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~----------------~g~~ 318 (382)
T PRK06108 256 KLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVE-VAKPD----------------GAMY 318 (382)
T ss_pred HHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCC----------------eeEE
Confidence 655443344455554444444332 33445556666777788887665433 11121 1345
Q ss_pred EEEEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHH
Q psy12791 307 LSFYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQ 385 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~ 385 (393)
+++.+++ ......+.+.+ +..++.+.+|..+. . ..++++|+|++. + ++.++...+
T Consensus 319 ~~~~l~~-~~~~~~~~~~ll~~~gV~v~pg~~f~---~------------------~~~~~~Ris~~~-~-~~~l~~~l~ 374 (382)
T PRK06108 319 AFFRIPG-VTDSLALAKRLVDEAGLGLAPGTAFG---P------------------GGEGFLRWCFAR-D-PARLDEAVE 374 (382)
T ss_pred EEEeCCC-CCCHHHHHHHHHHhCCEEEeCchhhC---C------------------CCCCEEEEEecC-C-HHHHHHHHH
Confidence 7888842 11233444443 33355555554331 0 125899999998 4 443444444
Q ss_pred HHHHh
Q psy12791 386 ALRKA 390 (393)
Q Consensus 386 al~~~ 390 (393)
.|+++
T Consensus 375 ~l~~~ 379 (382)
T PRK06108 375 RLRRF 379 (382)
T ss_pred HHHHH
Confidence 44443
No 92
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=2.7e-32 Score=256.65 Aligned_cols=249 Identities=16% Similarity=0.169 Sum_probs=188.8
Q ss_pred cCCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHH
Q psy12791 17 IGSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTH 92 (393)
Q Consensus 17 ~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~ 92 (393)
.+..++++++ +.|.+++++++.+.+++.+... .+..|++++..++|+++|++++.+ ++|++++|+++ + .++..
T Consensus 17 ~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~---~~~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~ 93 (352)
T PRK03321 17 PGKTVPGAIKLSSNETPFGPLPSVRAAIARAAA---GVNRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQA 93 (352)
T ss_pred CCCCcccceeccCCCCCCCCCHHHHHHHHHHHH---hcCcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHH
Confidence 3333456778 8899999888877776654322 234566788999999999999976 68999999998 5 55566
Q ss_pred hcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHH
Q psy12791 93 LLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISA 167 (393)
Q Consensus 93 ~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~ 167 (393)
++++||+|+++.|+|. .+...++..|.+++.++.+ |++++++.+.+++++|++++|+||||.++|.+++.+
T Consensus 94 ~~~~gd~Vli~~p~y~----~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~ 169 (352)
T PRK03321 94 TAGPGDEVIFAWRSFE----AYPILVQVAGATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELAR 169 (352)
T ss_pred hcCCCCEEEeCCCCHH----HHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHH
Confidence 7899999999999997 3566678889999999875 688999988888999999999999999999999999
Q ss_pred HHHhC-CCcEEEEeCccCcccccCC----C----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCC
Q psy12791 168 VVKQH-PDILLVLDNTFLTAYYQKS----L----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGV 238 (393)
Q Consensus 168 l~~~~-~~~~livDea~~~~~~~~~----~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 238 (393)
+++.+ .++++|+||+|.++.+... + ..+..++++||||.+ |++|+|+||++++ +++++.+..... ..
T Consensus 170 l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~~v~~-~~~~~~~~~~~~--~~ 245 (352)
T PRK03321 170 FLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAY-GLAGLRVGYAVGH-PEVIAALRKVAV--PF 245 (352)
T ss_pred HHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHh-hhHHHhhhhhcCC-HHHHHHHHHhcC--CC
Confidence 99873 2899999999987654321 1 124569999999999 6999999999997 889888876532 33
Q ss_pred CCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 239 VPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
..+...+..+...+.. +.+++++..+++..+.+.|+..
T Consensus 246 ~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~ 286 (352)
T PRK03321 246 SVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA 286 (352)
T ss_pred CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4455555544444433 3334444455556667777653
No 93
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=8.2e-32 Score=255.93 Aligned_cols=319 Identities=16% Similarity=0.179 Sum_probs=212.6
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHH----hCCC----cEEEeccHHHH-H-HHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASL----EEAK----HGLCYSSGLGA-V-TAV 90 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~----~~~~----~~i~~~~G~~a-l-~~~ 90 (393)
+.++ +.+.+++.+++.+.+.+.+..... ..+| +..+..+||++++++ +|.+ +.+++|+|+++ + .++
T Consensus 30 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~ 107 (384)
T PRK12414 30 DALNLSQGAPNFAPDPALVEGVARAMRDG--HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAI 107 (384)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHHhC--CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHH
Confidence 4566 677778776666655543322111 2234 345677888888875 4653 46777777665 7 777
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
.+++.+||+|++++|+|.. +...++..|.+++.++.+ |++.+++.+.+++++|++++||||||.+++
T Consensus 108 ~~l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~ 183 (384)
T PRK12414 108 SALVHPGDEVIYFEPSFDS----YAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAAD 183 (384)
T ss_pred HHhcCCCCEEEEeCCCccc----hHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHH
Confidence 7889999999999999985 566677789999888764 678899988888999999999999999997
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC----CCC-----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK----SLP-----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL 232 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~----~~~-----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~ 232 (393)
+++|.++|+++ ++++|+||+|..+.+.. ++. .++.++++||||.+ |+||+|+||++++ +++++.+...
T Consensus 184 ~~~i~~~a~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-~~pGlRiG~~v~~-~~l~~~l~~~ 260 (384)
T PRK12414 184 LARLAQLTRNT-DIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSY-HVTGWRVGYCLAP-AELMDEIRKV 260 (384)
T ss_pred HHHHHHHHHHC-CeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccc-cCccceEEEEecC-HHHHHHHHHH
Confidence 77788888999 99999999999765431 111 13569999999999 7999999999997 7888888776
Q ss_pred HHhcCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEE
Q psy12791 233 QNSMGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSF 309 (393)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
........+...+.++...++. ....++.+.++++.+.+.|+.+. +. +..+. .+.++|+
T Consensus 261 ~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~-~~~~~----------------gg~~~~~ 322 (384)
T PRK12414 261 HQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSR-FE-LLPSE----------------GSFFMLA 322 (384)
T ss_pred HhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCC-Ce-ecCCC----------------cceEEEE
Confidence 6544444444444444444432 22344556677777888887652 22 22221 1345676
Q ss_pred EEcC--CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 310 YVNG--GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 310 ~~~~--~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
.+++ .....+.+...+...++.+.+|..+... +...+++|||++. .. +.+.+++
T Consensus 323 ~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~-------------------~~~~~~iRis~~~-~~----~~~~~~~ 378 (384)
T PRK12414 323 RFRHFSDESDSDFVLRLIRDARVATIPLSAFYTD-------------------GTDTGLIRLSFSK-DD----ATLVEGA 378 (384)
T ss_pred cccccCCCCHHHHHHHHHHhCCEEEecchhhcCC-------------------CCCCCEEEEEecC-CH----HHHHHHH
Confidence 7632 1112233334444456666666544211 1125799999996 32 3555555
Q ss_pred HHhhc
Q psy12791 388 RKACK 392 (393)
Q Consensus 388 ~~~~~ 392 (393)
+.+.+
T Consensus 379 ~rl~~ 383 (384)
T PRK12414 379 RRLCS 383 (384)
T ss_pred HHHhh
Confidence 55543
No 94
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.1e-31 Score=259.81 Aligned_cols=308 Identities=16% Similarity=0.175 Sum_probs=205.2
Q ss_pred CCCCCCC-CCCCCCCccCCeeeeCCCCCC-C----------CCccccCCCCc-hHHHHHHHHHHHhC--------CC-cE
Q psy12791 20 EPDQWRS-QCVIPPIILSTTFKQNTPGQP-P----------QGFEYSRSNNP-TRRNLERCIASLEE--------AK-HG 77 (393)
Q Consensus 20 ~~~~~~~-~~~~~p~~~~~~~~~~~~~~~-~----------~~~~y~~~~~~-~~~~lr~~la~~~~--------~~-~~ 77 (393)
.|..+|+ +.++||+.. ....+..... . ......+|+++ +..+||+++|++++ .+ ++
T Consensus 36 ~p~g~i~L~~~En~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~ 113 (468)
T PLN02450 36 NPSGIIQMGLAENQLSF--DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNK 113 (468)
T ss_pred CCCeeEEeehhHhHhhH--HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHH
Confidence 3556777 888888765 2222221110 0 01223445544 67789999999874 23 68
Q ss_pred EEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcc-cCCcEEEeeCCC-------CHHHHHhhcCC-----
Q psy12791 78 LCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAP-KIGLEVDFVDLR-------KIENLIKYIKP----- 142 (393)
Q Consensus 78 i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~-~~g~~v~~~~~~-------d~~~l~~~l~~----- 142 (393)
|++|+|+++ + .++.+++++||.|++++|+|+. +...+. ..|++++.++.+ |++++++.+.+
T Consensus 114 Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~----~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~ 189 (468)
T PLN02450 114 LVLTAGATSANETLMFCLAEPGDAFLLPTPYYPG----FDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLN 189 (468)
T ss_pred eEEccChHHHHHHHHHHhCCCCCEEEECCCCCCc----hHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcC
Confidence 999999887 6 6677788999999999999985 555555 589999998863 56777777643
Q ss_pred -CCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC-C----C------------CCcCcEEEE
Q psy12791 143 -NTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK-S----L------------PWGVDIVLY 201 (393)
Q Consensus 143 -~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~-~----~------------~~~~di~~~ 201 (393)
++++|+++|||||||.+++ +++|.++|+++ +++||+||+|+.+.+.. + + .....++++
T Consensus 190 ~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~-~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~ 268 (468)
T PLN02450 190 LKVKGVLITNPSNPLGTTTTRTELNLLVDFITAK-NIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVY 268 (468)
T ss_pred CCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHC-CcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEE
Confidence 6899999999999999998 66778888899 99999999999754321 1 0 124569999
Q ss_pred cccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC-------HHHHHHHHHHHHHHHHHHHh
Q psy12791 202 SLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT-------LPCRLKEHERGSIEVAKFLE 274 (393)
Q Consensus 202 S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~l~ 274 (393)
||||.+ |++|+|+||++++++.+.+.+..... .+ ..+...+.++...++. +...++++.++++.+.+.|+
T Consensus 269 S~SK~~-~l~GlRiG~li~~~~~l~~~~~~~~~-~~-~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~ 345 (468)
T PLN02450 269 SLSKDL-GLPGFRVGAIYSNDEMVVSAATKMSS-FG-LVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLE 345 (468)
T ss_pred eccccC-CCCCccEEEEEECCHHHHHHHHHHhh-cC-CCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 69999999999985666666655433 22 2344455555444433 23345666677777888887
Q ss_pred hCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC---C--HHHHHHHHHhc-CccccccccCCccccccCccccc
Q psy12791 275 SHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG---G--AEETRIFLESL-LIFRCAESLGGIESLADLPAEMT 348 (393)
Q Consensus 275 ~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~ 348 (393)
.+ ++. +..|. .|.++|+.++. + .+....+.+.+ ...++.+.+|..+..
T Consensus 346 ~~-gi~-~~~~~----------------~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~-------- 399 (468)
T PLN02450 346 AA-GIK-CLKSN----------------AGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHC-------- 399 (468)
T ss_pred Hc-CCc-ccCCC----------------ceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCC--------
Confidence 65 332 21121 13478888841 1 11222333333 345677777755421
Q ss_pred CCCCChhhHhhcCCCCCeEEEEecCCCh
Q psy12791 349 HKSIPKETRDALGITDNLVRLSVGVEGY 376 (393)
Q Consensus 349 ~~~~~~~~~~~~g~~~~~iRls~~~~~~ 376 (393)
..++++||+++..+.
T Consensus 400 -------------~~~g~~Rl~f~~~~~ 414 (468)
T PLN02450 400 -------------TEPGWFRVCFANMSE 414 (468)
T ss_pred -------------CCCCEEEEEecCCCH
Confidence 125899999996443
No 95
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=3.2e-32 Score=258.62 Aligned_cols=303 Identities=14% Similarity=0.167 Sum_probs=208.9
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHHhC----C---C-cEEEeccHHHH-H-HHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASLEE----A---K-HGLCYSSGLGA-V-TAV 90 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~~~----~---~-~~i~~~~G~~a-l-~~~ 90 (393)
+.++ +.+.+++.++..+.+.+.+.+.. .+..| +.++..++|+++|++++ . + +.|++|+|+++ + .++
T Consensus 21 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~ 98 (378)
T PRK07682 21 GVISLGVGEPDFVTPWNVREASIRSLEQ--GYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAM 98 (378)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHH
Confidence 4566 77888876554444433222211 12334 34788999999999874 2 2 37888898765 7 667
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC--
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD-- 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~-- 161 (393)
..++++||.|++++|+|+. +...++..|.+++.++.+ |++++++++.+++++|++++||||||.+++
T Consensus 99 ~~l~~~gd~vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~ 174 (378)
T PRK07682 99 RAIINPGDEVLIVEPSFVS----YAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKS 174 (378)
T ss_pred HHhCCCCCEEEEeCCCchh----hHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHH
Confidence 7788999999999999984 666777789998888752 689999998888999999999999999997
Q ss_pred -HHHHHHHHHhCCCcEEEEeCccCcccccCC------CC--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH
Q psy12791 162 -VKAISAVVKQHPDILLVLDNTFLTAYYQKS------LP--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL 232 (393)
Q Consensus 162 -~~~l~~l~~~~~~~~livDea~~~~~~~~~------~~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~ 232 (393)
+++|.++|+++ ++++|+||+|..+.+..+ +. ....++++||||.+ |+||+|+||++++ +++++.+...
T Consensus 175 ~~~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~GlR~G~~~~~-~~~i~~l~~~ 251 (378)
T PRK07682 175 ELEEIAVIVEKH-DLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGF-AMTGWRLGFIAAP-VYFSEAMLKI 251 (378)
T ss_pred HHHHHHHHHHHc-CcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccc-cChhhhhhhhhcC-HHHHHHHHHH
Confidence 77888999999 999999999998764321 11 14579999999999 6999999999997 8898988766
Q ss_pred HHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEE
Q psy12791 233 QNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLS 308 (393)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 308 (393)
........+...+..+...++. +...++.+.+++..+.+.|+++ ++. +..|. .+.++|
T Consensus 252 ~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~----------------g~~~~~ 313 (378)
T PRK07682 252 HQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLT-CHVPG----------------GAFYAF 313 (378)
T ss_pred HHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCc-cCCCC----------------eeEEEE
Confidence 5543344445554444444432 3444555667777888888765 222 22222 134567
Q ss_pred EEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecC
Q psy12791 309 FYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV 373 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 373 (393)
+.+.........+.+.+ +..++.+..|..+.. ..++++|||++.
T Consensus 314 ~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~---------------------~~~~~iRis~~~ 358 (378)
T PRK07682 314 PSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGE---------------------SGEGFIRCSYAT 358 (378)
T ss_pred EeccCCCCCHHHHHHHHHHhCCEEEcCchhhCc---------------------CCCCeEEEEeCC
Confidence 77632111234455443 344666666654310 115899999996
No 96
>PLN02187 rooty/superroot1
Probab=100.00 E-value=1.1e-31 Score=259.51 Aligned_cols=287 Identities=17% Similarity=0.196 Sum_probs=197.1
Q ss_pred CCchHHHHHHHHHHHhC------C-CcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 57 NNPTRRNLERCIASLEE------A-KHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~------~-~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
+..+..+||+++|++++ . +++|++|+|+++ + .++..++++||.|++++|+|+. |...++..|++++.
T Consensus 106 ~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~----y~~~~~~~g~~~~~ 181 (462)
T PLN02187 106 PGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPH----YDARAAYSGLEVRK 181 (462)
T ss_pred CCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcc----HHHHHHHcCCEEEE
Confidence 45678899999999874 2 378999999876 7 6777888999999999999984 66677889999998
Q ss_pred eCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC-C---CC
Q psy12791 128 VDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK-S---LP 193 (393)
Q Consensus 128 ~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~-~---~~ 193 (393)
+++. |++++++++.+++++++++|||||||.+++ +++|.++|+++ +++||+||+|.++.+.. + +.
T Consensus 182 ~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~-~i~iI~DE~Y~~l~f~~~~~~s~~ 260 (462)
T PLN02187 182 FDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKL-GIMVISDEVYDRTIFGDNPFVSMG 260 (462)
T ss_pred EeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHC-CCEEEEeccccccccCCCCceeHH
Confidence 8762 689999998888999999999999999998 77888889999 99999999999865431 1 11
Q ss_pred -C---cCcEEEEcccccccCCCCceEEEEEecChH-H---HHHHHHHHHhcCC--CCCHHHHHHHHhccC-----CHHHH
Q psy12791 194 -W---GVDIVLYSLTKYMNGHSDVVMGATVTNDDS-L---QARLKFLQNSMGV--VPSPFDCWLVTRGLK-----TLPCR 258 (393)
Q Consensus 194 -~---~~di~~~S~sK~~~G~~G~r~G~~~~~~~~-~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~ 258 (393)
. ...++++||||.| ++||+|+||+++++++ + ++.+......+.. .++...+.++...++ .+...
T Consensus 261 ~~~~~~~vi~l~SfSK~f-~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~ 339 (462)
T PLN02187 261 KFASIVPVLTLAGISKGW-VVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKK 339 (462)
T ss_pred HhccCCcEEEEecchhhc-CCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHH
Confidence 1 2469999999999 6999999999985443 3 3455554444333 234444444444442 23445
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC----H-HHHHHHHHhcCccccccc
Q psy12791 259 LKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG----A-EETRIFLESLLIFRCAES 333 (393)
Q Consensus 259 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~l~~~~~~~~ 333 (393)
++.+.++++.+.+.|+.++.+..+..|. .+.++++.+... . ...+.+...+...++.+.
T Consensus 340 ~~~l~~~r~~l~~~L~~~~~~~~~~~P~----------------gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~ 403 (462)
T PLN02187 340 NKILKHNVDLVCDRLKDIPCVVCPKKPE----------------SCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFL 403 (462)
T ss_pred HHHHHHHHHHHHHHHhhCCCCcCCCCCC----------------EeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEE
Confidence 5666677788888888765432122232 245677776310 0 122222333344566666
Q ss_pred cCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCC--hHHHHHHHHHHHH
Q psy12791 334 LGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEG--YTDLIADLDQALR 388 (393)
Q Consensus 334 ~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~--~~~~i~~l~~al~ 388 (393)
+|..+. .+++|||+++... .++-++++.+.++
T Consensus 404 pG~~fg-----------------------~~~~iRis~~~~~e~l~~al~rL~~~l~ 437 (462)
T PLN02187 404 PGDALG-----------------------LKNWMRITIGVEAHMLEDALERLKGFCT 437 (462)
T ss_pred CccccC-----------------------CCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 665431 1589999998641 2333344444443
No 97
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-31 Score=255.27 Aligned_cols=321 Identities=17% Similarity=0.179 Sum_probs=214.6
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCc-hHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCC
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNP-TRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSA 96 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~ 96 (393)
.+.++ +.+.|++++++.+.+.+.+.+.. ..+..|+++ +..++|+++|+++|.+ +++++++|+++ + .++..++.+
T Consensus 28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~ 106 (380)
T PRK06225 28 KEMIWMGQNTNHLGPHEEVREAMIRCIEE-GEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSP 106 (380)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCC
Confidence 45666 78899998888887765443221 123345443 5789999999999986 57777777665 7 666677889
Q ss_pred CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHH
Q psy12791 97 GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAI 165 (393)
Q Consensus 97 gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l 165 (393)
||+|++++|+|.. +...++..|++++.++.+ |++++++.+.+++++|++++|+||||.+++ +++|
T Consensus 107 gd~vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i 182 (380)
T PRK06225 107 GDNAVTPDPGYLI----IDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEF 182 (380)
T ss_pred CCEEEEcCCCCcc----hHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHH
Confidence 9999999999984 566678889999988752 678899988888999999999999999997 7788
Q ss_pred HHHHHhCCCcEEEEeCccCcccccCC----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCC
Q psy12791 166 SAVVKQHPDILLVLDNTFLTAYYQKS----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPS 241 (393)
Q Consensus 166 ~~l~~~~~~~~livDea~~~~~~~~~----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (393)
.++|+++ |+++|+||+|..+....+ ......+++.||||++ |++|+|+||++++ +++++.++...... ...+
T Consensus 183 ~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~-g~~G~RiG~i~~~-~~l~~~~~~~~~~~-~~~~ 258 (380)
T PRK06225 183 AEIARDN-DAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIF-GMAGLRIGAVVAT-PDLIEVVKSIVIND-LGTN 258 (380)
T ss_pred HHHHHHC-CcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhc-CCccceeEEEecC-HHHHHHHHHHHhcc-cCCC
Confidence 8889999 999999999976433221 1224678999999999 7999999999997 78888877654322 2233
Q ss_pred HHHHHHHHhccCC---HHHH-HHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHH
Q psy12791 242 PFDCWLVTRGLKT---LPCR-LKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEE 317 (393)
Q Consensus 242 ~~~~~~~~~~~~~---~~~~-~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (393)
...+..+...++. +..+ .+...++...+.+.|++++++.....|. .++++++.+......
T Consensus 259 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~g~~~~~~~~~~~~~ 322 (380)
T PRK06225 259 VIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPS----------------HGNMMVIDISEAGID 322 (380)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCC----------------CCeEEEEEcccccCC
Confidence 4444333333322 2222 2233344556677777655432111121 256788887421123
Q ss_pred HHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 318 TRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 318 ~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
...+.+.+...++.+..|..++ . +..++++|+|++. ++++++.+.++|++
T Consensus 323 ~~~l~~~l~~~gi~v~~g~~~~---~-----------------~~~~~~iR~s~~~--~~e~l~~~~~~l~~ 372 (380)
T PRK06225 323 PEDLVEYLLERKIFVRQGTYTS---K-----------------RFGDRYIRVSFSI--PREQVEVFCEEFPD 372 (380)
T ss_pred HHHHHHHHHHCCEEEcCCcccC---c-----------------CCCCceEEEEeCC--CHHHHHHHHHHHHH
Confidence 3445555544456655543221 0 0125799999986 34445555544443
No 98
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.1e-31 Score=256.79 Aligned_cols=286 Identities=17% Similarity=0.219 Sum_probs=199.5
Q ss_pred chHHHHHHHHHHHhC----C--C-c-EEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee
Q psy12791 59 PTRRNLERCIASLEE----A--K-H-GLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV 128 (393)
Q Consensus 59 ~~~~~lr~~la~~~~----~--~-~-~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~ 128 (393)
.+..+||+++|++++ . + + +|++|+|+++ + .++..++++||+|++++|+|.. +...++..|++++.+
T Consensus 91 ~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v 166 (413)
T PLN00175 91 FGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDS----YEATLSMAGAKIKTV 166 (413)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchh----HHHHHHHcCCEEEEE
Confidence 468899999998763 2 2 3 6888998765 7 6777888999999999999984 677788899999998
Q ss_pred CCC------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC---C---CC
Q psy12791 129 DLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK---S---LP 193 (393)
Q Consensus 129 ~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~---~---~~ 193 (393)
+.+ |++++++.+.+++++|++++||||||.+++ +++|.++|+++ ++++|+||+|..+.+.. + +.
T Consensus 167 ~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~-~~~ii~De~Y~~l~~~~~~~s~~~~~ 245 (413)
T PLN00175 167 TLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKEN-DVLAFTDEVYDKLAFEGDHISMASLP 245 (413)
T ss_pred ECCcccCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHc-CcEEEEecccCccccCCcccChhhCC
Confidence 764 578899998888999999999999999997 66788899999 99999999999865431 1 11
Q ss_pred --CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHH
Q psy12791 194 --WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSI 267 (393)
Q Consensus 194 --~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 267 (393)
.++.++++||||.+ |++|+|+||++++ +++++.+.........+.+...+..+...++. +...++.+.++++
T Consensus 246 ~~~~~vi~i~SfSK~~-~~~G~RiG~~v~~-~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~ 323 (413)
T PLN00175 246 GMYERTVTMNSLGKTF-SLTGWKIGWAIAP-PHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKD 323 (413)
T ss_pred CCcCcEEEEecchhhc-cCcchheeeeEeC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 24579999999999 6999999999997 88888887766544445555555555555432 3445566677778
Q ss_pred HHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhc-CccccccccCCccccccCcc
Q psy12791 268 EVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESL-LIFRCAESLGGIESLADLPA 345 (393)
Q Consensus 268 ~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~ 345 (393)
.+.+.|+.+ ++. +..|. .+.++|+.+.+ .......|.+.+ +..++.+.+|..|....
T Consensus 324 ~l~~~L~~~-g~~-~~~p~----------------g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~--- 382 (413)
T PLN00175 324 ILVEGLKEV-GFK-VYPSS----------------GTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNP--- 382 (413)
T ss_pred HHHHHHHHC-CCe-ecCCC----------------eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCC---
Confidence 888888765 232 22222 13457887631 111223444443 33355555554432110
Q ss_pred cccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 346 EMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
+..+++|||+++. + ++.++...+.|.+
T Consensus 383 ---------------~~~~~~iRls~~~-~-~e~l~~~~~rL~~ 409 (413)
T PLN00175 383 ---------------EDGKNLVRFAFCK-D-EETLRAAVERMKT 409 (413)
T ss_pred ---------------CCCCCEEEEEEcC-C-HHHHHHHHHHHHH
Confidence 0125799999985 3 4433333344443
No 99
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-31 Score=256.19 Aligned_cols=304 Identities=19% Similarity=0.189 Sum_probs=209.0
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHh----C--CC-cEEEeccHHHH-H-HHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLE----E--AK-HGLCYSSGLGA-V-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~----~--~~-~~i~~~~G~~a-l-~~~~ 91 (393)
+.++ +.+.+++.+++.+.+.+.+.... ...|. +.++..+||+++|+++ | .+ +.|++|+|+++ + .++.
T Consensus 34 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~ 111 (391)
T PRK08361 34 NVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYT--PNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFE 111 (391)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCC--CCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHH
Confidence 4566 67777776655554443322111 12232 4577889999999986 3 32 67888888775 6 6667
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
.++++||.|++++|+|.+ +...++..|++++.++.+ |++++++.+.+++++|++++||||||.++|
T Consensus 112 ~l~~~g~~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~ 187 (391)
T PRK08361 112 SLLEEGDEVIIPDPAFVC----YVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEV 187 (391)
T ss_pred HhcCCCCEEEEcCCCCcc----cHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHH
Confidence 788999999999999986 556677889999988763 688999999888999999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC----C---CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK----S---LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN 234 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~----~---~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~ 234 (393)
+++|.++|+++ ++++|+||+|..+.+.. + ....++++++|+||.+ |++|+|+||++++ +++++.+.....
T Consensus 188 ~~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-~~~GlRiG~~~~~-~~~~~~~~~~~~ 264 (391)
T PRK08361 188 AKAIADIAEDY-NIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTF-AMTGWRLGFVIAP-EQVIKDMIKLHA 264 (391)
T ss_pred HHHHHHHHHHc-CeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhc-CCcHhhhhhhccC-HHHHHHHHHHHh
Confidence 78889999999 99999999998765421 1 1124679999999999 6999999999997 788887766554
Q ss_pred hcCCCCCHHHHHHHHhccCC------HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEE
Q psy12791 235 SMGVVPSPFDCWLVTRGLKT------LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLS 308 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 308 (393)
......+...+..+...++. +...++...++...+.+.|+.++++. +..|. .+.++|
T Consensus 265 ~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~-~~~p~----------------g~~~~~ 327 (391)
T PRK08361 265 YIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIK-VFEPK----------------GAFYVF 327 (391)
T ss_pred hhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCe-ecCCC----------------EEEEEE
Confidence 43334444444444333322 34445556667777888888765543 32232 133578
Q ss_pred EEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecC
Q psy12791 309 FYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV 373 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 373 (393)
+.+++..-....+.+.+ +..++.+..|..+.. ..++++||+++.
T Consensus 328 ~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRi~~~~ 372 (391)
T PRK08361 328 ANIDETGMSSEDFAEWLLEKARVVVIPGTAFGK---------------------AGEGYIRISYAT 372 (391)
T ss_pred EECCCCCCCHHHHHHHHHHhCCEEEcCchhhCC---------------------CCCCEEEEEecC
Confidence 88852111223344433 334555655544310 115899999995
No 100
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-32 Score=252.78 Aligned_cols=299 Identities=14% Similarity=0.151 Sum_probs=207.5
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhC---CC-cEEEeccHHHH-HHHHHHhcC
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEE---AK-HGLCYSSGLGA-VTAVTHLLS 95 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~---~~-~~i~~~~G~~a-l~~~~~~~~ 95 (393)
.+.++ +.|+||+++++...+++.+.+. ...+++|++++..+||+++|++++ .+ ++|++|+|+++ +..+...+
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~-~~~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~- 96 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLN-SDTLRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF- 96 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhh-hhhhhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh-
Confidence 46677 8999999999888776654422 123555677789999999999998 44 79999999887 64333333
Q ss_pred CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCC---HHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC
Q psy12791 96 AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRK---IENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 96 ~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d---~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 172 (393)
|.|++++|+|. .|...++..|++++.++.++ ++.. .+ .++++++++|||||||.+++.+++.+++ ++
T Consensus 97 --d~v~v~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~~~~~--~~-~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~ 166 (335)
T PRK14808 97 --DRSVFFPPTYS----CYRIFAKAVGAKFLEVPLTKDLRIPEV--NV-GEGDVVFIPNPNNPTGHVFEREEIERIL-KT 166 (335)
T ss_pred --CcEEECCCCHH----HHHHHHHHcCCeEEEecCCCcCCCChh--Hc-cCCCEEEEeCCCCCCCCCcCHHHHHHHH-hc
Confidence 67999999998 58888999999999998852 1111 12 3579999999999999999999999998 47
Q ss_pred CCcEEEEeCccCcccccCCC----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHH
Q psy12791 173 PDILLVLDNTFLTAYYQKSL----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLV 248 (393)
Q Consensus 173 ~~~~livDea~~~~~~~~~~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (393)
+++||+||+|.++...... ...+.++++||||.+ |++|+|+||++++ +++++.+......++ .+...+.++
T Consensus 167 -~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~-~l~GlRvG~~v~~-~~~~~~l~~~~~~~~--~~~~~q~a~ 241 (335)
T PRK14808 167 -GAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAF-SLAAQRIGYVVSS-EKFIDAYNRVRLPFN--VSYVSQMFA 241 (335)
T ss_pred -CCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhc-cCcccceEEEEeC-HHHHHHHHHhcCCCC--CCHHHHHHH
Confidence 8999999999976422111 134679999999999 6999999999997 788888876553332 334444444
Q ss_pred HhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhc
Q psy12791 249 TRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESL 325 (393)
Q Consensus 249 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (393)
...++. .....+...++++.+.+.|+... +. +..+ .++++|+.+++ . ....+.+.+
T Consensus 242 ~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~-~~~~-----------------~g~f~~~~l~~-~-~~~~~~~~l 300 (335)
T PRK14808 242 KVALDHREIFEERTKFIVEERERMKSALREMG-YR-ITDS-----------------RGNFVFIFMEK-E-EKERLLEHL 300 (335)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CE-ECCC-----------------CCeEEEEeCCC-c-cHHHHHHHH
Confidence 443333 23344455566677778887652 22 2112 26789998852 2 224455555
Q ss_pred CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 326 LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 326 ~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
...++.+.. + .+++|+|++... +-+.+.++|+.
T Consensus 301 ~~~Gi~V~~---~-------------------------~~~~Risi~~~~---~~~~~~~~l~~ 333 (335)
T PRK14808 301 RAKNIAVRS---F-------------------------REGVRITIGKRE---ENDMILKELEV 333 (335)
T ss_pred HHCCeEEEE---C-------------------------CCCeEEecCCHH---HHHHHHHHHHh
Confidence 544544431 0 257999998753 33566666653
No 101
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-31 Score=253.34 Aligned_cols=211 Identities=14% Similarity=0.153 Sum_probs=159.5
Q ss_pred chHHHHHHHHHHHh----CC---Cc-EEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee
Q psy12791 59 PTRRNLERCIASLE----EA---KH-GLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV 128 (393)
Q Consensus 59 ~~~~~lr~~la~~~----~~---~~-~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~ 128 (393)
.+..+||+++|+++ |. ++ .+++|+|+++ + .++..++++||+|++++|+|+. +...+...|++++.+
T Consensus 73 ~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v 148 (394)
T PRK05942 73 EGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPA----HFRGPLIAGAQIYPI 148 (394)
T ss_pred CCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcc----hHHHHHHcCCEEEEe
Confidence 46789999999987 43 24 5888888776 7 6667788999999999999985 455566789999988
Q ss_pred CCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC----CC--
Q psy12791 129 DLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL-- 192 (393)
Q Consensus 129 ~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~----~~-- 192 (393)
+.+ |++++++.+.+++++|++++||||||.+++ +++|.++|+++ ++++|+||+|..+.+.. ++
T Consensus 149 ~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~-~~~iI~De~y~~~~~~~~~~~~~~~ 227 (394)
T PRK05942 149 ILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKY-EIMLVHDLCYAELAFDGYQPTSLLE 227 (394)
T ss_pred ecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHc-CeEEEEeccchhhccCCCCCCChhh
Confidence 763 678898888888999999999999999998 77888899999 99999999998765421 11
Q ss_pred -C--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHH
Q psy12791 193 -P--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERG 265 (393)
Q Consensus 193 -~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 265 (393)
. ....++++||||.+ |++|+|+||++++ +++++.++..........+...+..+...++. +...++.+.++
T Consensus 228 ~~~~~~~~i~~~SfSK~~-~~~GlRiG~i~~~-~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 305 (394)
T PRK05942 228 IPGAKDIGVEFHTLSKTY-NMAGWRVGFVVGN-RHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTR 305 (394)
T ss_pred CCCccccEEEEecchhcc-CChhhheeeeecC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 1 12458899999999 7999999999987 88999888766543334444444444444432 23334455566
Q ss_pred HHHHHHHHhhC
Q psy12791 266 SIEVAKFLESH 276 (393)
Q Consensus 266 ~~~l~~~l~~~ 276 (393)
...+.+.|+..
T Consensus 306 ~~~~~~~L~~~ 316 (394)
T PRK05942 306 RDFLIQGLGEL 316 (394)
T ss_pred HHHHHHHHHHC
Confidence 66677777654
No 102
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=8.9e-31 Score=254.31 Aligned_cols=312 Identities=15% Similarity=0.146 Sum_probs=201.7
Q ss_pred CCCCCCCC-CCCCCCC--cc-CCeeeeCCCC---------CCCCCccccCCCCchHHHHHHHHHHHhC--------CC-c
Q psy12791 19 SEPDQWRS-QCVIPPI--IL-STTFKQNTPG---------QPPQGFEYSRSNNPTRRNLERCIASLEE--------AK-H 76 (393)
Q Consensus 19 ~~~~~~~~-~~~~~p~--~~-~~~~~~~~~~---------~~~~~~~y~~~~~~~~~~lr~~la~~~~--------~~-~ 76 (393)
..|..+|. +.++||+ .+ .+.+.+.... .......|.. ..+..+||+++|++++ .+ +
T Consensus 43 ~np~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~--~~G~~~LR~aiA~~l~~~~g~~v~v~pe 120 (496)
T PLN02376 43 RNPHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQD--YHGLKKFRQAIAHFMGKARGGKVTFDPE 120 (496)
T ss_pred cCCCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCC--CCCcHHHHHHHHHHHHHHhCCCCcCChh
Confidence 34455666 7788887 44 3333332211 1111222332 3567889999999875 33 7
Q ss_pred EEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcc-cCCcEEEeeCCC-------CHHHHHhhc------
Q psy12791 77 GLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAP-KIGLEVDFVDLR-------KIENLIKYI------ 140 (393)
Q Consensus 77 ~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~-~~g~~v~~~~~~-------d~~~l~~~l------ 140 (393)
.|++|+|+++ + .++.++++|||.|++++|+|+. +...++ ..|++++.++++ |++.++.++
T Consensus 121 ~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~----~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~ 196 (496)
T PLN02376 121 RVVMSGGATGANETIMFCLADPGDVFLIPSPYYAA----FDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQES 196 (496)
T ss_pred hEEEccchHHHHHHHHHHhCCCCCEEEECCCCccc----hHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhc
Confidence 8999999886 7 7778889999999999999995 555555 589999999873 467665442
Q ss_pred CCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC--CCC---C-----------cCcEEEE
Q psy12791 141 KPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK--SLP---W-----------GVDIVLY 201 (393)
Q Consensus 141 ~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~--~~~---~-----------~~di~~~ 201 (393)
..++|+|+++|||||||.+++ +++|+++|+++ +++||+||+|....+.. ... . ...++++
T Consensus 197 ~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~-~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~ 275 (496)
T PLN02376 197 NKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRK-NIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVY 275 (496)
T ss_pred CCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEE
Confidence 246899999999999999999 66678888899 99999999999865421 100 0 1235689
Q ss_pred cccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC--H-HH----HHHHHHHHHHHHHHHHh
Q psy12791 202 SLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT--L-PC----RLKEHERGSIEVAKFLE 274 (393)
Q Consensus 202 S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~----~~~~~~~~~~~l~~~l~ 274 (393)
||||.+ |+||+|+||++++++.+.+.++..... + ..+...+.++...++. + .. .++++.++.+.+.+.|+
T Consensus 276 S~SK~~-glpGlRvG~li~~~~~l~~~~~~~~~~-~-~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~ 352 (496)
T PLN02376 276 SLSKDM-GLPGFRVGIVYSFNDSVVSCARKMSSF-G-LVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIK 352 (496)
T ss_pred eccccC-CCCcceEEEEEECCHHHHHHHHHHhhc-C-CCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 799999999999767777766544432 2 2445555555444433 1 22 23444555666677776
Q ss_pred hCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC------HHHHHHHHHhc-CccccccccCCccccccCcccc
Q psy12791 275 SHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG------AEETRIFLESL-LIFRCAESLGGIESLADLPAEM 347 (393)
Q Consensus 275 ~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~ 347 (393)
+. ++..+ .+. .|.++|+.++.. .+....+.+.+ +..++.+.+|..|..
T Consensus 353 ~~-gi~~~-~~~----------------aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~------- 407 (496)
T PLN02376 353 KA-DIACL-TSN----------------AGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRC------- 407 (496)
T ss_pred HC-CCccc-CCC----------------ceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCC-------
Confidence 53 22211 111 246789988421 11223444443 334777777765421
Q ss_pred cCCCCChhhHhhcCCCCCeEEEEecCCChHHH
Q psy12791 348 THKSIPKETRDALGITDNLVRLSVGVEGYTDL 379 (393)
Q Consensus 348 ~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~ 379 (393)
..++++||+++..+.+.+
T Consensus 408 --------------~~~g~~Ri~fa~~~~~~l 425 (496)
T PLN02376 408 --------------TEPGWFRICFANMDDDTL 425 (496)
T ss_pred --------------CCCCEEEEEeeCCCHHHH
Confidence 015899999996444433
No 103
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=4.7e-31 Score=252.23 Aligned_cols=308 Identities=16% Similarity=0.093 Sum_probs=203.7
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh----CC---Cc-EEEeccHHHH-H-HHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE----EA---KH-GLCYSSGLGA-V-TAV 90 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~----~~---~~-~i~~~~G~~a-l-~~~ 90 (393)
+.++ +.+++++.+++.....+.+.+.. ..+.+|++ .+..+||+++|+++ |. ++ +|++|+|+++ + .++
T Consensus 31 ~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~ 109 (405)
T PRK09148 31 DIIDLGMGNPDLPTPQHIVDKLCETAQD-PRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMA 109 (405)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHcC-cccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHH
Confidence 4566 66777776666555544332111 12344544 46789999999987 43 24 7999999886 7 666
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----CHHHHHhh---cCCCCcEEEEecCCCCcccccCH-
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----KIENLIKY---IKPNTKMVWIENPTNPLMTVFDV- 162 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----d~~~l~~~---l~~~~~~v~l~~p~nptG~~~~~- 162 (393)
..++++||.|++++|+|+. +...++..|++++.++.+ .++++++. ..++++++++++||||||.+++.
T Consensus 110 ~~l~~~gd~Vl~~~P~y~~----~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~ 185 (405)
T PRK09148 110 QAITAPGDVILCPNPSYPI----HAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLD 185 (405)
T ss_pred HHhcCCCCEEEEcCCCCcc----cHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHH
Confidence 7788999999999999985 556667889999998874 22333333 34578999999999999999994
Q ss_pred --HHHHHHHHhCCCcEEEEeCccCcccccC-C---C-C----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHH
Q psy12791 163 --KAISAVVKQHPDILLVLDNTFLTAYYQK-S---L-P----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKF 231 (393)
Q Consensus 163 --~~l~~l~~~~~~~~livDea~~~~~~~~-~---~-~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~ 231 (393)
++|.++|+++ +++||+||+|..+.+.. + + . .+..++++||||.+ |+||+|+||++++ +++++.+..
T Consensus 186 ~l~~l~~~a~~~-~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~-~~pGlR~G~~v~~-~~~i~~l~~ 262 (405)
T PRK09148 186 FYKDVVAFAKKH-DIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTF-SMAGWRMGFAVGN-ERLIAALTR 262 (405)
T ss_pred HHHHHHHHHHHc-CeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEecccccc-CCcchheeeeeCC-HHHHHHHHH
Confidence 6788889999 99999999999865421 1 1 1 12347799999999 6999999999987 889998887
Q ss_pred HHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceE
Q psy12791 232 LQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGML 307 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 307 (393)
.........+...+..+...++. +...++.+.+++..+.+.|+.+. +. +..|. .|.++
T Consensus 263 ~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~-~~~p~----------------~g~f~ 324 (405)
T PRK09148 263 VKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRAG-WD-IPPPA----------------ASMFA 324 (405)
T ss_pred HHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHcC-Cc-cCCCC----------------eeEEE
Confidence 76654444444444444444432 33345555667777778887542 21 11122 24568
Q ss_pred EEEEcCCH--HHHHHHHHh-cCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHH
Q psy12791 308 SFYVNGGA--EETRIFLES-LLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTD 378 (393)
Q Consensus 308 ~~~~~~~~--~~~~~~~~~-l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~ 378 (393)
|+.+++.. .....+.+. ++..++.+.+|..+.. ..++++||+++ .+.+.
T Consensus 325 ~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~---------------------~~~~~~Ri~~~-~~~~~ 376 (405)
T PRK09148 325 WAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGE---------------------HGDGYVRIALV-ENEQR 376 (405)
T ss_pred EEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCC---------------------CCCCeEEEEec-CCHHH
Confidence 88885311 112334333 3344666666654310 01579999998 44433
No 104
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=7.7e-31 Score=251.45 Aligned_cols=294 Identities=17% Similarity=0.205 Sum_probs=199.2
Q ss_pred CccCCeeeeCCCCCCCCCccccCCCCc-hHHHHHHHHHHHhC------------CC-cEEEeccHHHH-H-HHHHHhcCC
Q psy12791 33 IILSTTFKQNTPGQPPQGFEYSRSNNP-TRRNLERCIASLEE------------AK-HGLCYSSGLGA-V-TAVTHLLSA 96 (393)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~lr~~la~~~~------------~~-~~i~~~~G~~a-l-~~~~~~~~~ 96 (393)
+.+++.+.+.+.+.+.. .....|+++ +..+||+++|++++ .+ ++|++|+|+++ + .++..++++
T Consensus 49 ~~p~~~~~~a~~~~~~~-~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~ 127 (412)
T PTZ00433 49 LLTPAIQTKALVEAVDS-QECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDE 127 (412)
T ss_pred CCCCHHHHHHHHHHhhc-CCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCC
Confidence 34555555554332221 123345554 68899999999875 22 68999999876 7 667778899
Q ss_pred CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHH
Q psy12791 97 GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAIS 166 (393)
Q Consensus 97 gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~ 166 (393)
||+|+++.|+|.. +...++..|++++.++.+ |++++++.+.+++++|+++|||||||.+++ +++|.
T Consensus 128 gd~vlv~~P~y~~----~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~ 203 (412)
T PTZ00433 128 GDNILVPAPGFPH----YETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDII 203 (412)
T ss_pred CCEEEEccCCccc----HHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHH
Confidence 9999999999984 677788899999988763 578898888888999999999999999998 66778
Q ss_pred HHHHhCCCcEEEEeCccCcccccC-C---C-CC---cCcEEEEcccccccCCCCceEEEEEecC-----hHHHHHHHHHH
Q psy12791 167 AVVKQHPDILLVLDNTFLTAYYQK-S---L-PW---GVDIVLYSLTKYMNGHSDVVMGATVTND-----DSLQARLKFLQ 233 (393)
Q Consensus 167 ~l~~~~~~~~livDea~~~~~~~~-~---~-~~---~~di~~~S~sK~~~G~~G~r~G~~~~~~-----~~~~~~~~~~~ 233 (393)
++|+++ |++||+||+|.++.+.. + + .. ...++++||||.+ |.||+|+||+++.+ +++++.++...
T Consensus 204 ~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~-~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~ 281 (412)
T PTZ00433 204 RLCEEL-RLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNL-VVPGWRLGWLLLVDPHGNGGDFLDGMKRLG 281 (412)
T ss_pred HHHHHc-CCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhc-CCCCeeEEEEEEeCCcccHHHHHHHHHHHh
Confidence 889999 99999999999865431 1 1 11 2358999999999 69999999999721 35666665544
Q ss_pred HhcCCCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEE
Q psy12791 234 NSMGVVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLS 308 (393)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 308 (393)
... ...+...+.++...+. .+...++...++++.+.+.|+.+.++. +..|. .+.++|
T Consensus 282 ~~~-~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~----------------gg~f~~ 343 (412)
T PTZ00433 282 MLV-CGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLS-PTMPR----------------GSMFLM 343 (412)
T ss_pred hcc-CCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCC----------------eeEEEE
Confidence 322 2344444443333332 133344556667777888887654332 22222 245688
Q ss_pred EEEcCC----HHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC
Q psy12791 309 FYVNGG----AEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE 374 (393)
Q Consensus 309 ~~~~~~----~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~ 374 (393)
+.++.. ......+.+.+. ..++.+..|..+. .++++|++++..
T Consensus 344 ~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-----------------------~~~~iRis~~~~ 391 (412)
T PTZ00433 344 SRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFH-----------------------MPGFTRLTISRP 391 (412)
T ss_pred EEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccC-----------------------CCCeEEEEecCC
Confidence 888421 012344555543 3466666654431 047999999864
No 105
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.9e-31 Score=246.20 Aligned_cols=189 Identities=19% Similarity=0.204 Sum_probs=150.7
Q ss_pred ccCCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHH-HHHHHHh
Q psy12791 16 HIGSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGA-VTAVTHL 93 (393)
Q Consensus 16 ~~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~a-l~~~~~~ 93 (393)
|||.++.+++| +.|+||+.| +.+.+++.+... ...+|| ....+|+++|++++ ++|++|+|+++ +..+..+
T Consensus 2 ~~~~~~~~~i~l~~~~np~~p-~~~~~a~~~~~~---~~~~yp--~~~~l~~~ia~~~~--~~I~vt~G~~~al~~~~~~ 73 (311)
T PRK08354 2 HGGIREEGLIDFSASVNPYPP-EWLDEMFERAKE---ISGRYT--YYEWLEEEFSKLFG--EPIVITAGITEALYLIGIL 73 (311)
T ss_pred CCCCCccceeEecCCCCCCCC-HHHHHHHHHHHH---HhhcCC--ChHHHHHHHHHHHC--CCEEECCCHHHHHHHHHHh
Confidence 88999999999 999999964 555555543322 233444 45789999999998 46999999887 6444455
Q ss_pred cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHH
Q psy12791 94 LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVK 170 (393)
Q Consensus 94 ~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~ 170 (393)
+.+||.|++++|+|+ .|...++..|++++.++. |++.+++.+. +++++++++||||||.+++ +++|.++|+
T Consensus 74 ~~~gd~vlv~~P~y~----~~~~~~~~~g~~~~~~~~-d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~ 147 (311)
T PRK08354 74 ALRDRKVIIPRHTYG----EYERVARFFAARIIKGPN-DPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLLDAVE 147 (311)
T ss_pred hCCCCeEEEeCCCcH----HHHHHHHHcCCEEeecCC-CHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHHHHhh
Confidence 568999999999998 478888999999988865 6888888776 5789999999999999998 556666778
Q ss_pred hCCCcEEEEeCccCcccccC-CCCCcCcEEEEcccccccCCCCceEEEEEe
Q psy12791 171 QHPDILLVLDNTFLTAYYQK-SLPWGVDIVLYSLTKYMNGHSDVVMGATVT 220 (393)
Q Consensus 171 ~~~~~~livDea~~~~~~~~-~~~~~~di~~~S~sK~~~G~~G~r~G~~~~ 220 (393)
++ ++++|+||+|.++.+.. .......++++||||.+ |+||+|+||+++
T Consensus 148 ~~-~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~-~l~GlRiG~~v~ 196 (311)
T PRK08354 148 DR-NALLILDEAFIDFVKKPESPEGENIIKLRTFTKSY-GLPGIRVGYVKG 196 (311)
T ss_pred hc-CcEEEEeCcchhccccccccCCCcEEEEeccHhhc-CCccceeeeeee
Confidence 88 99999999998876532 22345679999999999 699999999998
No 106
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=5.1e-31 Score=259.13 Aligned_cols=248 Identities=15% Similarity=0.176 Sum_probs=171.2
Q ss_pred CCCC-CC-CCCCCcc--CCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHh------CCC-cEEEeccHHHH-H-HH
Q psy12791 23 QWRS-QC-VIPPIIL--STTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLE------EAK-HGLCYSSGLGA-V-TA 89 (393)
Q Consensus 23 ~~~~-~~-~~~p~~~--~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~------~~~-~~i~~~~G~~a-l-~~ 89 (393)
++++ +. +.+|++. ++...+++.+.+.....|+ +..+..+||+++|+++ +.+ ++|++|+|+++ + .+
T Consensus 147 ~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~--~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~ 224 (517)
T PRK13355 147 HILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYS--DSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLS 224 (517)
T ss_pred CeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCC--CCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHH
Confidence 4555 33 6666654 5555554443322223343 2346899999999998 444 78999999887 6 66
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC-
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD- 161 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~- 161 (393)
+.+++++||+|++++|+|+. |...++..|++++.++++ |++++++++.+++++|+++|||||||.+++
T Consensus 225 ~~~l~~~Gd~Vli~~P~y~~----y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~ 300 (517)
T PRK13355 225 MSALLDDGDEVLIPSPDYPL----WTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPR 300 (517)
T ss_pred HHHhCCCCCEEEEcCCCCcC----HHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCH
Confidence 77889999999999999984 677788899999888763 689999999889999999999999999999
Q ss_pred --HHHHHHHHHhCCCcEEEEeCccCcccccC-C-CC---C-c--CcEEEEcccccccCCCCceEEEEEec-ChHH----H
Q psy12791 162 --VKAISAVVKQHPDILLVLDNTFLTAYYQK-S-LP---W-G--VDIVLYSLTKYMNGHSDVVMGATVTN-DDSL----Q 226 (393)
Q Consensus 162 --~~~l~~l~~~~~~~~livDea~~~~~~~~-~-~~---~-~--~di~~~S~sK~~~G~~G~r~G~~~~~-~~~~----~ 226 (393)
+++|.++|+++ +++||+||+|..+.++. + .. . . ..++++||||.+ |++|+|+||++++ ++++ +
T Consensus 301 ~~l~~i~~~a~~~-~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~-~~~G~RiG~~i~~~~~~~~~~~~ 378 (517)
T PRK13355 301 EVLQQIVDIAREH-QLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSH-MIAGYRIGWMILSGNKRIAKDYI 378 (517)
T ss_pred HHHHHHHHHHHHc-CcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhc-cCcccceEEEEeeCchhhHHHHH
Confidence 77888899999 99999999999866532 1 11 1 1 135569999999 6999999999953 2433 3
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHhccCC---HHHH---HHHHHHHHHHHHHHHhhCCCc
Q psy12791 227 ARLKFLQNSMGVVPSPFDCWLVTRGLKT---LPCR---LKEHERGSIEVAKFLESHPCV 279 (393)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~l~~~l~~~~~~ 279 (393)
+.+..... ...+.+...+.++...+.. .... ..+..+++..+.+.|+.++++
T Consensus 379 ~~l~~~~~-~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 436 (517)
T PRK13355 379 EGLNMLAN-MRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGI 436 (517)
T ss_pred HHHHHHhc-CcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 33332222 2222333333333333321 2222 223445567777888766554
No 107
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=7.3e-31 Score=248.45 Aligned_cols=294 Identities=13% Similarity=0.096 Sum_probs=191.9
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCc-hHHHHHHHHHHHh----CC---CcEEEeccHHHH-H-HHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNP-TRRNLERCIASLE----EA---KHGLCYSSGLGA-V-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~lr~~la~~~----~~---~~~i~~~~G~~a-l-~~~~ 91 (393)
+.++ +.+.||+.+++...+.+.+... ....|+++ +..+||+++|+++ |. +++|++|+|+++ + .++.
T Consensus 25 ~~i~l~~~~p~~~~~~~~~~a~~~~~~---~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~ 101 (374)
T PRK05839 25 KGLDLTIGEPQFETPKFIQDALKNNAH---LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQ 101 (374)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHhh---ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHH
Confidence 5667 7888888776555555433222 23445444 5678999998765 53 378999999886 6 4445
Q ss_pred Hhc--CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 92 HLL--SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 92 ~~~--~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
.++ ++||.|+++.|+|+. |...++..|++++.++.+ +++.....+ +++++|+++|||||||.+++
T Consensus 102 ~~~~~~~gd~vlv~~P~y~~----~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~~-~~~k~v~i~nP~NPTG~~~s~~~ 176 (374)
T PRK05839 102 FVLFDKQNPTIAYPNPFYQI----YEGAAIASRAKVLLMPLTKENDFTPSLNEKEL-QEVDLVILNSPNNPTGRTLSLEE 176 (374)
T ss_pred HHhcCCCCCEEEECCCCchh----hHHHHHhcCCEEEEeecccccCCcCCcchhhh-ccccEEEEeCCCCCcCcccCHHH
Confidence 443 579999999999984 777788999999999874 111111222 46899999999999999998
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccCCC-------------CCcCcEEEEcccccccCCCCceEEEEEecChHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQKSL-------------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQAR 228 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~~~-------------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~ 228 (393)
+++|+++|+++ |++||+||+|.++....+. ..++.++++||||.| |.||+|+||++++ +++.+.
T Consensus 177 l~~i~~~~~~~-~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~ii~~-~~~~~~ 253 (374)
T PRK05839 177 LIEWVKLALKH-DFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRS-SAPGLRSGFIAGD-ASILKK 253 (374)
T ss_pred HHHHHHHHHHc-CCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEecccccc-CCccceeEEEecC-HHHHHH
Confidence 66677778889 9999999999985432111 114669999999999 7999999999997 888888
Q ss_pred HHHHHHhcCCCCCHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcc
Q psy12791 229 LKFLQNSMGVVPSPFDCWLVTRGL---KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSG 305 (393)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~ 305 (393)
+.......+...+...+..+...+ +.+...++...++++.+.+.|. + ..|. .+.
T Consensus 254 ~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~----~---~~p~----------------gg~ 310 (374)
T PRK05839 254 YKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREILG----I---TIPP----------------ATF 310 (374)
T ss_pred HHHHHhhcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhcC----C---CCCC----------------eeE
Confidence 876655444444444333333222 2233334444445444444331 1 1221 256
Q ss_pred eEEEEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecC
Q psy12791 306 MLSFYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV 373 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 373 (393)
++|+.++++ ..+.+++ +..++.+.+|..+... +..++++|||++.
T Consensus 311 fi~~~~~~~----~~~~~~l~~~~gi~v~pg~~f~~~-------------------~~~~~~iRis~~~ 356 (374)
T PRK05839 311 YVWLPVDND----EEFTKKLYQNEGIKVLPGSFLGRN-------------------GIGKGYVRIALVY 356 (374)
T ss_pred EEEEeCCCh----HHHHHHHHHHCCEEEeCchhhCCC-------------------CCCCCeEEEEecC
Confidence 789998532 2344443 2245565555433110 1125899999975
No 108
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=5.7e-31 Score=250.63 Aligned_cols=319 Identities=16% Similarity=0.135 Sum_probs=216.8
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHHhC------C-CcEEEeccHHHH-H-HHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASLEE------A-KHGLCYSSGLGA-V-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~~~------~-~~~i~~~~G~~a-l-~~~~ 91 (393)
+.+| +.+.+|+.++..+.+.+.+.... ..+..| +..+..+||+++|++++ . +++|++|+|+++ + .++.
T Consensus 30 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~ 108 (386)
T PRK07550 30 PLIDLSQAVPGYPPPPELLRALAEAAAD-PAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMV 108 (386)
T ss_pred CeEEeCCCCCCCCCCHHHHHHHHHHHhC-cCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHH
Confidence 4567 77888876666655544332111 122334 34678899999998864 2 278999999765 7 6666
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
.++++||+|++++|+|.. +...++..|++++.++.+ |++++++.+.+++++|++++||||||.+++
T Consensus 109 ~l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~ 184 (386)
T PRK07550 109 TLAGAGDEVILPLPWYFN----HKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPEL 184 (386)
T ss_pred HhcCCCCEEEEcCCCCcc----hHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHH
Confidence 778999999999999985 566678899999998874 578899988888999999999999999998
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC--C--C-C----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK--S--L-P----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL 232 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~--~--~-~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~ 232 (393)
+++|.++|+++ ++++|+|++|..+.... + . . ....+++.||||.+ |++|+|+||++++ +++++.+...
T Consensus 185 ~~~i~~~~~~~-~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~i~~~-~~~~~~~~~~ 261 (386)
T PRK07550 185 LHELYDLARRH-GIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSY-ALTGHRVGAVVAS-PARIAEIEKF 261 (386)
T ss_pred HHHHHHHHHHc-CeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhc-cCcccceEeeecC-HHHHHHHHHH
Confidence 78899999999 99999999998754321 1 1 1 12468899999999 6999999999997 7888888776
Q ss_pred HHhcCCCCCHHHHHHHHhccCCHHH----HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEE
Q psy12791 233 QNSMGVVPSPFDCWLVTRGLKTLPC----RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLS 308 (393)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 308 (393)
....+...+...+..+...++.+.. .++.+.++.+.+.+.|..++.+. + .+. .+.++|
T Consensus 262 ~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~----------------g~~~~~ 323 (386)
T PRK07550 262 MDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWE-L-LAS----------------GAYFAY 323 (386)
T ss_pred HhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCce-e-CCC----------------ceEEEE
Confidence 6655555556565555555554332 23444556667777887653321 1 111 245678
Q ss_pred EEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 309 FYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
+.++........+.+.+ +..++.+..|..+.. ..++++||+++..+ +++++...+.|
T Consensus 324 ~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~---------------------~~~~~iRis~~~~~-~~~~~~~~~~l 381 (386)
T PRK07550 324 VRHPFPDRPSREVARRLAKEAGILCLPGTMFGP---------------------GQEGYLRLAFANAD-VAGIGELVERL 381 (386)
T ss_pred ecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCC---------------------CCCCEEEEEeecCC-HHHHHHHHHHH
Confidence 88742112234444443 334566655544310 11579999998765 44344444444
Q ss_pred HH
Q psy12791 388 RK 389 (393)
Q Consensus 388 ~~ 389 (393)
.+
T Consensus 382 ~~ 383 (386)
T PRK07550 382 RA 383 (386)
T ss_pred Hh
Confidence 43
No 109
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=7.3e-31 Score=250.07 Aligned_cols=305 Identities=16% Similarity=0.133 Sum_probs=205.8
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCC-CCccccCCCCchHHHHHHHHHHHh----CC--C-cEEEeccHHHH-H-HHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPP-QGFEYSRSNNPTRRNLERCIASLE----EA--K-HGLCYSSGLGA-V-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~lr~~la~~~----~~--~-~~i~~~~G~~a-l-~~~~ 91 (393)
+.++ +.+.+++.+++.+.+.+.+.+. ....|. +..+..+||+++|+++ |. + ++|++|+|+++ + .++.
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~ 108 (388)
T PRK07337 31 DIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYT--SALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACL 108 (388)
T ss_pred CEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHH
Confidence 4456 6667776666555554433221 122233 2346789999999986 32 2 67888888775 7 6667
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
.++++||+|++++|+|+. +...++..|++++.++.+ |++++++.+.+++++|++++||||||.+++
T Consensus 109 ~l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~ 184 (388)
T PRK07337 109 ALVERGDEVLMPDPSYPC----NRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDE 184 (388)
T ss_pred HhcCCCCEEEEeCCCchh----hHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHH
Confidence 788999999999999985 455567779899888763 678999999888999999999999999998
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC-CC---CC-cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK-SL---PW-GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM 236 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~-~~---~~-~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~ 236 (393)
+++|.++|+++ ++++|+||+|..+.+.. +. .. ...++++||||.+ |++|+|+||++++ +++++.+......+
T Consensus 185 ~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~~G~RiG~~~~~-~~l~~~l~~~~~~~ 261 (388)
T PRK07337 185 LRRIVEAVRAR-GGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYF-NMTGWRLGWLVVP-EALVGTFEKLAQNL 261 (388)
T ss_pred HHHHHHHHHHC-CCEEEEeccccccccCCCCcChhhccCCEEEEEechhhc-CCchhheeeeecC-HHHHHHHHHHHHHh
Confidence 67788888999 99999999998755422 11 11 2347899999999 6999999999997 78888887776555
Q ss_pred CCCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEE
Q psy12791 237 GVVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYV 311 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
+...+...+.++...+. .+.+.++.+.++++.+.+.|+.+ ++.....|. .|.++|+.+
T Consensus 262 ~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p~----------------~g~f~~~~~ 324 (388)
T PRK07337 262 FICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMPD----------------GAFYVYADC 324 (388)
T ss_pred ccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCC----------------eeEEEEEec
Confidence 54455545444433332 23334455566677778888764 222111222 245789988
Q ss_pred cCC----HHHHHHHHHh-cCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecC
Q psy12791 312 NGG----AEETRIFLES-LLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV 373 (393)
Q Consensus 312 ~~~----~~~~~~~~~~-l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 373 (393)
+.. ......|... ++..++.+.+|..+... ..++++|++++.
T Consensus 325 ~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~--------------------~~~~~~Ri~~~~ 371 (388)
T PRK07337 325 RGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPH--------------------APRDYIRLSYAT 371 (388)
T ss_pred ccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCC--------------------CCCCEEEEEecC
Confidence 420 0122334433 34446666666543210 015899999996
No 110
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-31 Score=248.65 Aligned_cols=240 Identities=18% Similarity=0.215 Sum_probs=178.8
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-HHHHHHhcCCCCe
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-VTAVTHLLSAGDH 99 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l~~~~~~~~~gd~ 99 (393)
+.+| +.|.||+.+++.+.+++.+.+.. ..+.+|++++..+||+++|++++.+ ++|++|+|+++ +..+...+ +||+
T Consensus 19 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~-~gd~ 96 (337)
T PRK03967 19 YRIWLDKNENPFDLPEELKEEIFEELKR-VPFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF-EGKH 96 (337)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHhhc-CccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh-CCCe
Confidence 4567 88999998877776665443221 2356677778899999999999976 79999999887 54444444 7999
Q ss_pred EEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCC
Q psy12791 100 IISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPD 174 (393)
Q Consensus 100 vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 174 (393)
|+++.|+|+ .+...++..|++++.++.+ |++++++.+ ++++++++++||||||.+++.++|.++++ + +
T Consensus 97 V~v~~P~y~----~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~-~ 169 (337)
T PRK03967 97 IVITPPTFG----MYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEILKVLE-T-G 169 (337)
T ss_pred EEEeCCChH----HHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHHHh-c-C
Confidence 999999997 4666778899999998874 567777765 57899999999999999999999999995 7 8
Q ss_pred cEEEEeCccCcccccCCC----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHh
Q psy12791 175 ILLVLDNTFLTAYYQKSL----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTR 250 (393)
Q Consensus 175 ~~livDea~~~~~~~~~~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (393)
+++|+||+|.++...... .....++++||||.+ |++|+|+||++++ +++++.+......+ ..+...+.++..
T Consensus 170 ~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~-~l~GlRiG~iv~~-~~~i~~~~~~~~~~--~~~~~~q~~~~~ 245 (337)
T PRK03967 170 KPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAF-GLAGIRAGYAIAN-EEIIDALYRIKPPF--SLNILTMKIVRL 245 (337)
T ss_pred CEEEEECchhhhcccchHHHHhhCCCEEEEecchHhh-cchhhhheeeecC-HHHHHHHHhhcCCC--CCCHHHHHHHHH
Confidence 999999999875432111 124569999999999 6999999999997 88888887665433 334555555554
Q ss_pred ccCCH---HHHHHHHHHHHHHHHHHHhh
Q psy12791 251 GLKTL---PCRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 251 ~~~~~---~~~~~~~~~~~~~l~~~l~~ 275 (393)
.++.. .+.++...+++..+.+.|..
T Consensus 246 ~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 273 (337)
T PRK03967 246 ALDHYDLIEERIDYIIKERERVRRELGE 273 (337)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44432 22334444555566666653
No 111
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.98 E-value=2.6e-30 Score=247.25 Aligned_cols=272 Identities=18% Similarity=0.129 Sum_probs=186.3
Q ss_pred CCchHHHHHHHHHHHhC------CC-cEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 57 NNPTRRNLERCIASLEE------AK-HGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~------~~-~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
+..+..+||+++|++++ .+ ++|++|+|+++ + .++.+++++||.|++++|+|+. |...++..|++++.
T Consensus 72 ~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~----~~~~~~~~g~~~~~ 147 (409)
T PLN00143 72 PTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPD----VETYAIFHHLEIRH 147 (409)
T ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcC----HHHHHHHcCCEEEE
Confidence 45678889999999873 23 68999999886 6 6677888999999999999985 66778889999998
Q ss_pred eCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC----CCC
Q psy12791 128 VDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK----SLP 193 (393)
Q Consensus 128 ~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~----~~~ 193 (393)
++.+ |++++++++.+++++++++|||||||.+++ +++|.++|+++ +++||+||+|..+.+.. ++.
T Consensus 148 ~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~l~~~~~~~~~~~ 226 (409)
T PLN00143 148 FDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKL-GILVIADEVYGHIVFGSKPFVPMG 226 (409)
T ss_pred EeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHc-CCeEEEEccccccccCCCCCcchh
Confidence 8752 689999888888999999999999999999 67788889999 99999999999865431 111
Q ss_pred ----CcCcEEEEcccccccCCCCceEEEEEecC-hHHHH------HHHHHHHhcCCCCCHHHHHHHHhccC-----CHHH
Q psy12791 194 ----WGVDIVLYSLTKYMNGHSDVVMGATVTND-DSLQA------RLKFLQNSMGVVPSPFDCWLVTRGLK-----TLPC 257 (393)
Q Consensus 194 ----~~~di~~~S~sK~~~G~~G~r~G~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 257 (393)
..+.++++||||.| |+||+|+||+++++ +.+.+ .+........ ..+...+.++...++ .+..
T Consensus 227 ~~~~~~~vi~~~SfSK~f-~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~q~a~~~~l~~~~~~~~~~ 304 (409)
T PLN00143 227 LFASIVPVITLGSISKRW-MIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAP-FPPTFIQAAIPEILEKTTEDFFSK 304 (409)
T ss_pred hhcccCcEEEEccchhhc-CCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccC-CCCchHHHHHHHHHhcChHHHHHH
Confidence 13569999999999 69999999999843 33432 2322222212 223334444443332 2344
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC----CHHHHHHHH-HhcCcccccc
Q psy12791 258 RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG----GAEETRIFL-ESLLIFRCAE 332 (393)
Q Consensus 258 ~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~l~~~~~~~ 332 (393)
.++...++.+.+.+.|++++.......|. .+.++|+.++. +......++ ..+...++.+
T Consensus 305 ~~~~~~~~~~~~~~~L~~~~~~~~~~~p~----------------gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v 368 (409)
T PLN00143 305 TINILRAALAFCYDKLKEIPCIMCPQKAE----------------GAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLII 368 (409)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCCCC----------------eeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEE
Confidence 55556666677777777654321111121 24578998841 001122333 3334456666
Q ss_pred ccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC
Q psy12791 333 SLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE 374 (393)
Q Consensus 333 ~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~ 374 (393)
.+|..+. .++++||+++..
T Consensus 369 ~pg~~f~-----------------------~~~~iRi~~~~~ 387 (409)
T PLN00143 369 LPGVTVG-----------------------LKNWLRITFAVE 387 (409)
T ss_pred eCccccC-----------------------CCCeEEEEEcCC
Confidence 6664431 157999999953
No 112
>PLN02656 tyrosine transaminase
Probab=99.98 E-value=2e-30 Score=248.29 Aligned_cols=238 Identities=20% Similarity=0.218 Sum_probs=172.1
Q ss_pred CccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHHhC------C-CcEEEeccHHHH-H-HHHHHhcCCCCeEEE
Q psy12791 33 IILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASLEE------A-KHGLCYSSGLGA-V-TAVTHLLSAGDHIIS 102 (393)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~~~------~-~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~ 102 (393)
+.+++.+.+++.+.+... ....| +..+..++|+++|++++ . +++|++|+|+++ + .++.+++++||+|++
T Consensus 47 ~~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv 125 (409)
T PLN02656 47 FHTTHVAQEAVVDALQSN-KFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILL 125 (409)
T ss_pred CCCCHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEE
Confidence 445555555443322221 12233 34678899999999874 2 268888888776 7 667777899999999
Q ss_pred cCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhC
Q psy12791 103 GDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQH 172 (393)
Q Consensus 103 ~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~ 172 (393)
++|+|+. +...++..|++++.++.+ |++++++.++++++++++++||||||.+++ +++|.++|+++
T Consensus 126 ~~p~y~~----~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~ 201 (409)
T PLN02656 126 PRPGFPI----YELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKL 201 (409)
T ss_pred eCCCCCc----HHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHc
Confidence 9999984 556667789999888762 678898888888999999999999999996 77888899999
Q ss_pred CCcEEEEeCccCcccccC----CC----CCcCcEEEEcccccccCCCCceEEEEEecC-------hHHHHHHHHHHHhcC
Q psy12791 173 PDILLVLDNTFLTAYYQK----SL----PWGVDIVLYSLTKYMNGHSDVVMGATVTND-------DSLQARLKFLQNSMG 237 (393)
Q Consensus 173 ~~~~livDea~~~~~~~~----~~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~-------~~~~~~~~~~~~~~~ 237 (393)
+++||+||+|..+.+.. ++ ...+.++++||||.| ++||+|+||+++++ +++++++.......+
T Consensus 202 -~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f-~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (409)
T PLN02656 202 -KILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRW-IVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILG 279 (409)
T ss_pred -CCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhc-cCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhc
Confidence 99999999999765432 11 123569999999999 69999999999852 578887776554432
Q ss_pred CCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCC
Q psy12791 238 VVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPC 278 (393)
Q Consensus 238 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (393)
..+...+.++...++ .+...++...+++..+.+.|+.++.
T Consensus 280 -~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~ 324 (409)
T PLN02656 280 -GPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPC 324 (409)
T ss_pred -CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 334445544444443 2444455666777778888876543
No 113
>PRK07683 aminotransferase A; Validated
Probab=99.98 E-value=2.5e-30 Score=246.07 Aligned_cols=245 Identities=18% Similarity=0.236 Sum_probs=174.3
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHHh----CC---Cc-EEEeccHHHH-H-HHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASLE----EA---KH-GLCYSSGLGA-V-TAV 90 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~~----~~---~~-~i~~~~G~~a-l-~~~ 90 (393)
+.+| +.+.+.+.+++.+.+.+.+.... .+..| +..+..+||+++|+++ |. ++ +|++|+|++. + .++
T Consensus 29 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~ 106 (387)
T PRK07683 29 NLISLTIGQPDFPTPSHVKEAAKRAITE--NYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAF 106 (387)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHH
Confidence 4456 44444444444444443332211 12334 3467889999999987 32 24 7888888665 7 666
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
..++++||.|+++.|+|+. +...++..|++++.++.+ |.+++++.+.++++++++++||||||.+++
T Consensus 107 ~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~ 182 (387)
T PRK07683 107 RTILEPGTEVILPAPIYPG----YEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEE 182 (387)
T ss_pred HHhCCCCCEEEEcCCCccc----hHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHH
Confidence 6778999999999999985 566677889999999874 567898888888999999999999999998
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC---CC-C----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK---SL-P----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ 233 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~---~~-~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~ 233 (393)
+++|.++|+++ ++++|+||+|.++.+.. ++ . .++.++++||||.+ |+||+|+||++++ +++++.+....
T Consensus 183 ~~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~-~~pGlRiG~i~~~-~~l~~~~~~~~ 259 (387)
T PRK07683 183 LQDIADVLKDK-NIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSH-SMTGWRIGFLFAP-SYLAKHILKVH 259 (387)
T ss_pred HHHHHHHHHHc-CeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccc-cCccceeEEEEcC-HHHHHHHHHHH
Confidence 77888999999 99999999999865432 11 1 23579999999999 6999999999997 78888887654
Q ss_pred HhcCCCCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHhhC
Q psy12791 234 NSMGVVPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
.......+...+..+...++ .++..++.+.+++..+.+.|...
T Consensus 260 ~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 306 (387)
T PRK07683 260 QYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM 306 (387)
T ss_pred HhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 43333344444444433332 23334555566777777777754
No 114
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.98 E-value=9.9e-31 Score=250.02 Aligned_cols=248 Identities=16% Similarity=0.150 Sum_probs=168.3
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCC---ccccCC-CCchHHHHHHHHHHHh---CCC-cEEEeccHHHH-HHHHH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQG---FEYSRS-NNPTRRNLERCIASLE---EAK-HGLCYSSGLGA-VTAVT 91 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~---~~y~~~-~~~~~~~lr~~la~~~---~~~-~~i~~~~G~~a-l~~~~ 91 (393)
.+.++ +.+++++.+++.+.+.+...+... ..+..| +.++..+||+++|+++ +.+ ++|++|+|+++ +..+.
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l~ 112 (402)
T TIGR03542 33 ADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRLQ 112 (402)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHHH
Confidence 35667 788888877765555433221111 112233 4678899999999975 444 79999999887 55556
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCc-----------EEEeeCCCCHHHHHhhc--CCCCcEEEEecCCCCccc
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL-----------EVDFVDLRKIENLIKYI--KPNTKMVWIENPTNPLMT 158 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~-----------~v~~~~~~d~~~l~~~l--~~~~~~v~l~~p~nptG~ 158 (393)
.++.+||.|++++|+|.. +...++..|+ +++.++.+..+.+...+ .+++++|++++||||||.
T Consensus 113 ~l~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~ 188 (402)
T TIGR03542 113 SLFGSDNTVAVQDPVYPA----YVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGT 188 (402)
T ss_pred HhcCCCCEEEEeCCCCcc----hHHHHHHcCCccccccccccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCc
Confidence 677899999999999984 7777888898 88888764211121111 146899999999999999
Q ss_pred ccC---HHHHHHHHHhCCCcEEEEeCccCcccccC--CCC-------CcCcEEEEcccccccCCCCceEEEEEecChHHH
Q psy12791 159 VFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK--SLP-------WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQ 226 (393)
Q Consensus 159 ~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~--~~~-------~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~ 226 (393)
+++ +++|.++|+++ +++||+||+|.++.... +.. .+..++++||||.+ |+||+|+||++++ ++++
T Consensus 189 ~~s~~~~~~l~~~a~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-g~pGlRiG~~i~~-~~l~ 265 (402)
T TIGR03542 189 VLTKEQLKELVDYANEH-GSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTA-GFTGVRLGWTVVP-KELT 265 (402)
T ss_pred cCCHHHHHHHHHHHHHc-CeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCcccc-CCCCcceEEEEec-HHHh
Confidence 999 77888899999 99999999999865432 111 12458899999999 7999999999997 6665
Q ss_pred --------HHHHHHHHhcCCCCCHHHHHHHHhccCC-----HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 227 --------ARLKFLQNSMGVVPSPFDCWLVTRGLKT-----LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 227 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
+.+...........+...+.++...+.. ....++...++.+.+.+.|+..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 328 (402)
T TIGR03542 266 YADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA 328 (402)
T ss_pred hcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2221112122223444444433333321 2233444556667778888764
No 115
>PRK08912 hypothetical protein; Provisional
Probab=99.98 E-value=2.1e-30 Score=246.91 Aligned_cols=277 Identities=18% Similarity=0.181 Sum_probs=192.9
Q ss_pred cCCCC-chHHHHHHHHHHHh----CC---Cc-EEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCC
Q psy12791 54 SRSNN-PTRRNLERCIASLE----EA---KH-GLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG 122 (393)
Q Consensus 54 ~~~~~-~~~~~lr~~la~~~----~~---~~-~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g 122 (393)
.+|++ .+..+||+++|+++ |. ++ +|++|+|+++ + .++..++++||+|++++|+|+. +...++..|
T Consensus 57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~----~~~~~~~~g 132 (387)
T PRK08912 57 NQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDA----YLPLIRRAG 132 (387)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchh----hHHHHHHcC
Confidence 34544 46789999999875 32 24 7888888775 7 6677788999999999999984 677788899
Q ss_pred cEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC---
Q psy12791 123 LEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK--- 190 (393)
Q Consensus 123 ~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~--- 190 (393)
++++.++.+ |++++++.+.++++++++++||||||.+++ +++|.++|+++ ++++|+||+|..+.+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~-~~~ii~De~y~~~~~~~~~~ 211 (387)
T PRK08912 133 GVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRH-DAVAICDEVWEHVVFDGRRH 211 (387)
T ss_pred CEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CeEEEEhhhhhhcccCCCCC
Confidence 999888763 678999988888999999999999999998 66788899999 99999999998754421
Q ss_pred -CC----C-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccC----CHHHHHH
Q psy12791 191 -SL----P-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLK----TLPCRLK 260 (393)
Q Consensus 191 -~~----~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 260 (393)
++ . .+++++++|+||.+ |++|+|+||++++ +++++.+...........++..+..+...+. .+...++
T Consensus 212 ~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~-~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 289 (387)
T PRK08912 212 IPLMTLPGMRERTVKIGSAGKIF-SLTGWKVGFVCAA-PPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRA 289 (387)
T ss_pred cChhhCCCccCceEEEeechhhc-cCcCceeEEEecC-HHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHH
Confidence 11 1 24679999999999 7999999999997 8888888766554333333333333322221 2333455
Q ss_pred HHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-C-HHHHHHHHHhc-CccccccccCCc
Q psy12791 261 EHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-G-AEETRIFLESL-LIFRCAESLGGI 337 (393)
Q Consensus 261 ~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~l-~~~~~~~~~g~~ 337 (393)
.+.++++.+.+.|+.+ ++. +..+. .+.++|+.++. . ......+.+.+ +..++.+.+|..
T Consensus 290 ~~~~~~~~l~~~L~~~-g~~-~~~~~----------------g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 351 (387)
T PRK08912 290 DLARSRDRLAAGLRRI-GFP-VLPSQ----------------GTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSA 351 (387)
T ss_pred HHHHHHHHHHHHHHhC-CCc-ccCCC----------------cceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchh
Confidence 5667777788888765 222 21111 13467888742 1 12344455543 444666666544
Q ss_pred cccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC
Q psy12791 338 ESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE 374 (393)
Q Consensus 338 ~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~ 374 (393)
+.... ...+++||+++..
T Consensus 352 f~~~~-------------------~~~~~iRl~~~~~ 369 (387)
T PRK08912 352 FYEED-------------------PVTSVVRFCFAKR 369 (387)
T ss_pred hCCCC-------------------CCCCEEEEEEeCC
Confidence 32110 1258999999963
No 116
>PRK09265 aminotransferase AlaT; Validated
Probab=99.98 E-value=2.9e-30 Score=247.11 Aligned_cols=297 Identities=15% Similarity=0.177 Sum_probs=193.0
Q ss_pred CCCCCc--cCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHh------CCC-cEEEeccHHHH-H-HHHHHhcCCC
Q psy12791 29 VIPPII--LSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLE------EAK-HGLCYSSGLGA-V-TAVTHLLSAG 97 (393)
Q Consensus 29 ~~~p~~--~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~------~~~-~~i~~~~G~~a-l-~~~~~~~~~g 97 (393)
+.+|+. +++.+.+++.+.......|+. ..+..+||+++|+++ +.+ ++|++++|+++ + .++.+++++|
T Consensus 42 ~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~--~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~g 119 (404)
T PRK09265 42 NPAPFGFEAPDEILRDVIRNLPTAQGYSD--SKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNG 119 (404)
T ss_pred CCCcCCCCCCHHHHHHHHHHhhcCCCCCC--CCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCC
Confidence 444433 444444444332222233432 245689999999997 444 68999999887 6 6667788999
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHH
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISA 167 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~ 167 (393)
|+|++++|+|.. +...++..|.+++.++.+ |++++++.+.+++++|++++||||||.+++ +++|.+
T Consensus 120 d~Vlv~~p~y~~----~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~ 195 (404)
T PRK09265 120 DEVLVPAPDYPL----WTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVE 195 (404)
T ss_pred CEEEEeCCCCcC----hHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHH
Confidence 999999999985 666677788888877542 578899888888999999999999999999 888899
Q ss_pred HHHhCCCcEEEEeCccCcccccC----CC---CC-cCcEEEEcccccccCCCCceEEEEEec-ChH----HHHHHHHHHH
Q psy12791 168 VVKQHPDILLVLDNTFLTAYYQK----SL---PW-GVDIVLYSLTKYMNGHSDVVMGATVTN-DDS----LQARLKFLQN 234 (393)
Q Consensus 168 l~~~~~~~~livDea~~~~~~~~----~~---~~-~~di~~~S~sK~~~G~~G~r~G~~~~~-~~~----~~~~~~~~~~ 234 (393)
+|+++ |+++|+||+|.++.+.. ++ .. ...++++||||.+ |+||+|+||++++ ++. +++.+.....
T Consensus 196 ~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~ 273 (404)
T PRK09265 196 IARQH-NLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAY-RVAGFRVGWMVLSGPKKHAKGYIEGLDMLAS 273 (404)
T ss_pred HHHHC-CCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhc-cCcccceEEEEEeCchHHHHHHHHHHHHHhc
Confidence 99999 99999999998765421 11 11 1347899999999 6999999999963 343 3333322211
Q ss_pred hcCCCCCHHHHHHHHhccCC---HHHH---HHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEE
Q psy12791 235 SMGVVPSPFDCWLVTRGLKT---LPCR---LKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLS 308 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 308 (393)
.....+...+.++...+.. .... .++..+++..+.+.|+.++++. +..|. .+.++|
T Consensus 274 -~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~-~~~p~----------------~g~~l~ 335 (404)
T PRK09265 274 -MRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVS-CVKPK----------------GALYAF 335 (404)
T ss_pred -cccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCC----------------cceEEE
Confidence 2223333444444443332 2211 2344566667778887665532 22222 245688
Q ss_pred EEEcCCH----HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEec
Q psy12791 309 FYVNGGA----EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVG 372 (393)
Q Consensus 309 ~~~~~~~----~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~ 372 (393)
+.+++.. ...+.+.+.+...++.+..|..+.. ..++++|++++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~---------------------~~~~~~Ri~~~ 382 (404)
T PRK09265 336 PKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNW---------------------PEPDHFRIVTL 382 (404)
T ss_pred EEecccccCCCCHHHHHHHHHHhCCEEEECchhhCC---------------------CCCCeEEEEeC
Confidence 8884211 2333444555555666666544311 11579999996
No 117
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.98 E-value=2.2e-30 Score=246.78 Aligned_cols=246 Identities=17% Similarity=0.202 Sum_probs=178.3
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHHhC----C----CcEEEeccHHHH-H-HH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASLEE----A----KHGLCYSSGLGA-V-TA 89 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~~~----~----~~~i~~~~G~~a-l-~~ 89 (393)
.+.++ +.+.+|+.+++.+.+...+.... .+..| +..+..+||+++|++++ . +++|++++|+++ + .+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~ 107 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDA--NQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSAS 107 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH
Confidence 35677 78888887766555544332211 12234 34567899999999864 2 257888888765 7 66
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCC---CCcEEEEecCCCCccccc
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKP---NTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~---~~~~v~l~~p~nptG~~~ 160 (393)
+..++++||.|++++|+|.. +...++..|.+++.++.+ |++.+++++.. ++++|++++||||||.++
T Consensus 108 ~~~~~~~gd~vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~ 183 (391)
T PRK07309 108 LTAILEPGDKVLLPAPAYPG----YEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTY 183 (391)
T ss_pred HHHhcCCCCEEEEeCCCCcc----hHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCc
Confidence 77788999999999999995 566778889999988763 67888888753 589999999999999999
Q ss_pred C---HHHHHHHHHhCCCcEEEEeCccCcccccC----CC---CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH
Q psy12791 161 D---VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL---PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK 230 (393)
Q Consensus 161 ~---~~~l~~l~~~~~~~~livDea~~~~~~~~----~~---~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~ 230 (393)
+ +++|.++|+++ ++++|+|++|.++.+.. ++ ...+.++++||||.+ |++|+|+||++++ +++++.+.
T Consensus 184 s~~~~~~l~~~~~~~-~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRvG~~v~~-~~~~~~~~ 260 (391)
T PRK07309 184 SREQIKALADVLKKY-DIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSH-AMTGWRIGLIFAP-AEFTAQLI 260 (391)
T ss_pred CHHHHHHHHHHHHHc-CcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhc-cCccceeEEEEeC-HHHHHHHH
Confidence 8 78888899999 99999999999866521 11 124569999999999 7999999999997 88888887
Q ss_pred HHHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 231 FLQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
..........+...+..+...++. ....++.+.+++..+.+.|+.+
T Consensus 261 ~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 310 (391)
T PRK07309 261 KSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL 310 (391)
T ss_pred HHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC
Confidence 655433334444444444444433 2223444556666777777754
No 118
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.98 E-value=4.3e-30 Score=245.79 Aligned_cols=295 Identities=17% Similarity=0.185 Sum_probs=198.3
Q ss_pred CCccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHHhC-----CC-cEEEeccHHHH-H-HHHHHhcCCCCeEEE
Q psy12791 32 PIILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASLEE-----AK-HGLCYSSGLGA-V-TAVTHLLSAGDHIIS 102 (393)
Q Consensus 32 p~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~~~-----~~-~~i~~~~G~~a-l-~~~~~~~~~gd~vl~ 102 (393)
++.+++.+.+.+.+.+... .+..| +..+..+||+++|++++ .+ ++|++++|+++ + .++..++++||+|++
T Consensus 46 ~~~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i 124 (401)
T TIGR01264 46 NLPTDPEVMQAMKDSLDSG-KYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILV 124 (401)
T ss_pred CCCCCHHHHHHHHHHHhcc-CCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEE
Confidence 4666666665543322221 22334 45778899999999987 33 67888888775 7 667778899999999
Q ss_pred cCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhC
Q psy12791 103 GDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQH 172 (393)
Q Consensus 103 ~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~ 172 (393)
++|+|. .+...++..|++++.++.+ |++.+++.+.+++++|++++||||||.+++ +++|.++|+++
T Consensus 125 ~~P~y~----~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~ 200 (401)
T TIGR01264 125 PRPGFP----LYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQ 200 (401)
T ss_pred eCCCCh----hHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHC
Confidence 999998 4677788899999888652 688898888878999999999999999997 77888888999
Q ss_pred CCcEEEEeCccCcccccC----CC-CC---cCcEEEEcccccccCCCCceEEEEEecCh-----HHHHHHHHHHHhcCCC
Q psy12791 173 PDILLVLDNTFLTAYYQK----SL-PW---GVDIVLYSLTKYMNGHSDVVMGATVTNDD-----SLQARLKFLQNSMGVV 239 (393)
Q Consensus 173 ~~~~livDea~~~~~~~~----~~-~~---~~di~~~S~sK~~~G~~G~r~G~~~~~~~-----~~~~~~~~~~~~~~~~ 239 (393)
++++|+||+|.++.+.. ++ .. ...++++||||.| |+||+|+||++++++ ++++.++..... ...
T Consensus 201 -~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~-~~~ 277 (401)
T TIGR01264 201 -CLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRW-LVPGWRLGWIIIHDRRGILRDIRDGLVKLSQR-ILG 277 (401)
T ss_pred -CCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccC-CCccceEEEEEecCcchhHHHHHHHHHHHhhc-cCC
Confidence 99999999999865432 11 11 1358999999999 699999999998742 344444333221 122
Q ss_pred CCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-
Q psy12791 240 PSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG- 313 (393)
Q Consensus 240 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~- 313 (393)
.+...+.++...++ .+...++.+.++++.+.+.|+.++++. +..|. .|.++|+.++.
T Consensus 278 ~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~----------------~g~f~~~~~~~~ 340 (401)
T TIGR01264 278 PCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLR-PVMPS----------------GAMYMMVGIEME 340 (401)
T ss_pred CCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCC----------------eeeEEEEEeccc
Confidence 23333333333332 234445566677778888888765432 22232 25678888731
Q ss_pred ---CHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC
Q psy12791 314 ---GAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE 374 (393)
Q Consensus 314 ---~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~ 374 (393)
+......+.+.+ +..++.+..|+.+. .++++|+|++..
T Consensus 341 ~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~-----------------------~~~~iRis~~~~ 382 (401)
T TIGR01264 341 HFPEFKNDVEFTERLVAEQSVFCLPGSCFE-----------------------YPGFFRVVLTVP 382 (401)
T ss_pred ccCCCCCHHHHHHHHHHhCCEEEeCchhcC-----------------------CCCeEEEEEcCC
Confidence 001123344443 34456665554431 147999999864
No 119
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.98 E-value=3.1e-30 Score=242.70 Aligned_cols=298 Identities=20% Similarity=0.261 Sum_probs=218.4
Q ss_pred CchHHHHHHHHHHHhCCC--cEEEeccHHHH-H-HHHHHh---cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 58 NPTRRNLERCIASLEEAK--HGLCYSSGLGA-V-TAVTHL---LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~--~~i~~~~G~~a-l-~~~~~~---~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
...+++.|+++|+++|++ +.|++|.|+++ + .....+ +++||+|++++.+|+++...|...++..|++++++|.
T Consensus 65 t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~ 144 (405)
T COG0520 65 TDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPL 144 (405)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEec
Confidence 346788999999999987 68999999886 7 444555 6899999999999999999999999999999999997
Q ss_pred C-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCC-CcCcEEEEccc
Q psy12791 131 R-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLP-WGVDIVLYSLT 204 (393)
Q Consensus 131 ~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~-~~~di~~~S~s 204 (393)
+ +.++++..++++||+|.+++.+|.||.+.|+++|.++||++ |+++++|.+|+.++....+. .++|+++.|.|
T Consensus 145 ~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~~la~~~-ga~v~VDaaq~~~h~~idv~~l~~Df~afsgH 223 (405)
T COG0520 145 DDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAELAHEH-GALVLVDAAQAAGHLPIDVQELGCDFLAFSGH 223 (405)
T ss_pred CCCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHHHHHHHc-CCEEEEECccccCccCCCchhcCCCEEEEccc
Confidence 5 68999999999999999999999999999999999999999 99999999999887654443 68999999999
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHHHHh----------------------cCCCCCHHHHHHHHhccCC-----HHH
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKFLQNS----------------------MGVVPSPFDCWLVTRGLKT-----LPC 257 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~-----~~~ 257 (393)
||+.||.| +|.++++ +++.+.+...... -.+.+.......+..+++. +..
T Consensus 224 Kwl~gP~G--iGvLy~r-~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~ 300 (405)
T COG0520 224 KWLLGPTG--IGVLYVR-KELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEA 300 (405)
T ss_pred ccccCCCc--eEEEEEc-hHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHH
Confidence 98878889 9999998 7877776321110 0111111111111222221 122
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhcCccccccccCC
Q psy12791 258 RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESLLIFRCAESLGG 336 (393)
Q Consensus 258 ~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~g~ 336 (393)
..+...+...++.+.|+++|++.....+. ....++++|.+++ ...+...+++. .++++..|.
T Consensus 301 i~~~e~~L~~~~~~~L~~~~~v~i~g~~~--------------~~r~~~vsF~v~~~~~~dv~~~L~~---~gI~vr~g~ 363 (405)
T COG0520 301 IEAHERELTEYLLEGLSELPGVEIYGPPD--------------ADRGGIVSFNVKGIHPHDVATLLDE---KGIAVRAGH 363 (405)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEecCCc--------------ccCceEEEEEeCCCCHHHHHHHHHh---CCeEEEecc
Confidence 22333455667778888888866332221 1236899999965 34555555554 346666665
Q ss_pred ccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 337 IESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 337 ~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.|... . +. ..++ .+.+|+|++++||+++|++|.++|+++.
T Consensus 364 ~ca~p---~-~~----------~~~~-~~~iR~S~~~YNt~edid~l~~aL~~~~ 403 (405)
T COG0520 364 HCAQP---L-HR----------LLGV-DATIRASLHLYNTEEDVDRLLEALKKAL 403 (405)
T ss_pred ccccH---H-HH----------hcCC-CCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence 44221 1 11 1122 4559999999999999999999999865
No 120
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.98 E-value=3.2e-30 Score=246.32 Aligned_cols=317 Identities=19% Similarity=0.181 Sum_probs=214.7
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHh----C--CC-cEEEeccHHH-HH-HHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLE----E--AK-HGLCYSSGLG-AV-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~----~--~~-~~i~~~~G~~-al-~~~~ 91 (393)
+.++ +.+.+++.+++.+.+...+.+.. ...|. +..+..+||+++|+++ | .+ +++++++|++ ++ .++.
T Consensus 32 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~ 109 (393)
T PRK05764 32 DVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYT--PAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFM 109 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcC--CCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHH
Confidence 4556 56666665555554443322211 12233 2456789999999987 3 22 6788888866 57 6667
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
.++++||.|++++|+|.. +..+++..|++++.++.+ |++++++.+.+++++|++++|+||||.+++
T Consensus 110 ~~~~~gd~vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~ 185 (393)
T PRK05764 110 ALLDPGDEVIIPAPYWVS----YPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEE 185 (393)
T ss_pred HhcCCCCEEEecCCCCcc----hHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHH
Confidence 788999999999999985 667778889999998874 578999998888999999999999999997
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC----C---C---CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK----S---L---PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKF 231 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~----~---~---~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~ 231 (393)
+++|.++|+++ ++++++|++|..+.+.. + + ..+++++++||||.+ |++|+|+||++++ +++++.++.
T Consensus 186 ~~~l~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-~~~G~RiG~i~~~-~~~~~~~~~ 262 (393)
T PRK05764 186 LEAIADVAVEH-DIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAY-AMTGWRLGYAAGP-KELIKAMSK 262 (393)
T ss_pred HHHHHHHHHHC-CcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccc-cCccceeEEEecC-HHHHHHHHH
Confidence 77888999999 99999999998765421 1 1 124689999999999 6999999999987 889888877
Q ss_pred HHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceE
Q psy12791 232 LQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGML 307 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 307 (393)
.........++..+..+...++. +...++...++...+.+.|++++++. +..|. .+.++
T Consensus 263 ~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~----------------g~~~~ 325 (393)
T PRK05764 263 LQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLE-CPKPE----------------GAFYV 325 (393)
T ss_pred HHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCc-ccCCC----------------cceEE
Confidence 66655555566665555555431 23344455566677788887765543 21121 13457
Q ss_pred EEEEcCCHHH----HHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHH
Q psy12791 308 SFYVNGGAEE----TRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIAD 382 (393)
Q Consensus 308 ~~~~~~~~~~----~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~ 382 (393)
|+.+++.... ...+.+.+ +..++.+..|..+. . ++++|+|++. ++++++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~----------------------~-~~~vRis~~~--~~~~~~~ 380 (393)
T PRK05764 326 FPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFG----------------------A-PGYVRLSYAT--SLEDLEE 380 (393)
T ss_pred EEecccccccccCCHHHHHHHHHHhCCEEEccccccC----------------------C-CCEEEEEecC--CHHHHHH
Confidence 7777421111 13343332 33455555554321 0 4899999985 4555555
Q ss_pred HHHHHHHh
Q psy12791 383 LDQALRKA 390 (393)
Q Consensus 383 l~~al~~~ 390 (393)
..+.|.++
T Consensus 381 ~i~~l~~~ 388 (393)
T PRK05764 381 GLERIERF 388 (393)
T ss_pred HHHHHHHH
Confidence 55555544
No 121
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.97 E-value=5.6e-30 Score=245.90 Aligned_cols=216 Identities=18% Similarity=0.214 Sum_probs=159.8
Q ss_pred CchHHHHHHHHHHHhCC------C-cEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee
Q psy12791 58 NPTRRNLERCIASLEEA------K-HGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV 128 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~------~-~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~ 128 (393)
..+..++|+++|++++. + +.|++|+|+++ + .++..++++||+|++++|+|+. |...+...|++++.+
T Consensus 93 ~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~----y~~~~~~~g~~~~~~ 168 (430)
T PLN00145 93 CVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPL----YEARAVFSGLEVRHF 168 (430)
T ss_pred CccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcc----HHHHHHHcCCEEEEe
Confidence 35788999999999752 2 67888888775 7 6677788999999999999985 666677889999888
Q ss_pred CCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC----CC--
Q psy12791 129 DLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL-- 192 (393)
Q Consensus 129 ~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~----~~-- 192 (393)
++. |++++++.+++++++++++|||||||.+++ +++|.++|+++ |++||+||+|..+.+.. ++
T Consensus 169 ~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~-~i~ii~De~Y~~~~~~~~~~~~~~~ 247 (430)
T PLN00145 169 DLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKL-GILVIADEVYDHLTFGSKPFVPMGV 247 (430)
T ss_pred eCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEeccchhhccCCCCccchhh
Confidence 752 789999988889999999999999999999 77788889999 99999999999865432 11
Q ss_pred -C-CcCcEEEEcccccccCCCCceEEEEEecC-hHHHH------HHHHHHHhcCCCCCHHHHHHHHhccCC-----HHHH
Q psy12791 193 -P-WGVDIVLYSLTKYMNGHSDVVMGATVTND-DSLQA------RLKFLQNSMGVVPSPFDCWLVTRGLKT-----LPCR 258 (393)
Q Consensus 193 -~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 258 (393)
. ....++++||||.| ++||+|+||+++++ +.+++ .++.... .....+...+.++...++. +...
T Consensus 248 ~~~~~~vi~~~S~SK~~-~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~ 325 (430)
T PLN00145 248 FGEVAPVLTLGSISKRW-VVPGWRLGWIATCDPNGILKETKVVDSIRNYLN-ISTDPATFVQGAIPQIIANTKEEFFTKT 325 (430)
T ss_pred hcccCcEEEEecccccc-CCCCeeEEEEEEecchhhhhhhHHHHHHHHHhc-ccCCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence 1 23569999999999 69999999999742 33433 2322222 2223334444444333332 3445
Q ss_pred HHHHHHHHHHHHHHHhhCCCcc
Q psy12791 259 LKEHERGSIEVAKFLESHPCVK 280 (393)
Q Consensus 259 ~~~~~~~~~~l~~~l~~~~~~~ 280 (393)
++.+.++++.+.+.|+.++++.
T Consensus 326 ~~~~~~~~~~~~~~L~~~~g~~ 347 (430)
T PLN00145 326 LGLLKETADICYEKIKEIKCIT 347 (430)
T ss_pred HHHHHHHHHHHHHHHhcCCCCC
Confidence 5666677777888887766543
No 122
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.97 E-value=2.4e-30 Score=247.93 Aligned_cols=246 Identities=15% Similarity=0.108 Sum_probs=168.1
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCC------CCccccCCCCchHHHHHHHHHHHh------CCC-cEEEeccHHHH-
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPP------QGFEYSRSNNPTRRNLERCIASLE------EAK-HGLCYSSGLGA- 86 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~------~~~~y~~~~~~~~~~lr~~la~~~------~~~-~~i~~~~G~~a- 86 (393)
.+.++ +.+++|+.+++.+.+.+.+.+. ....|+ +.++..+||+++|+++ +.+ ++|++|+|+++
T Consensus 34 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~--~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~a 111 (409)
T PRK07590 34 AKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYG--PEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCD 111 (409)
T ss_pred CceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCC--CCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHH
Confidence 35667 8888888777655443322211 122343 5678889999999985 344 79999999887
Q ss_pred HHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE-----------EEeeCCCCHHHHHhhc-CCCCcEEEEecCCC
Q psy12791 87 VTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE-----------VDFVDLRKIENLIKYI-KPNTKMVWIENPTN 154 (393)
Q Consensus 87 l~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~-----------v~~~~~~d~~~l~~~l-~~~~~~v~l~~p~n 154 (393)
+.++..++.+||+|++++|+|+. +...++..|.+ ++.++.+.-+.+...+ .+++++|++++|||
T Consensus 112 l~~l~~~~~~gd~V~v~~P~Y~~----~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~N 187 (409)
T PRK07590 112 TGNILDIFGPDNTIAVTDPVYPV----YVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPNN 187 (409)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcc----hHHHHHHcCCcccccccccccceeEeecccccCCcccCcccCceEEEEeCCCC
Confidence 65556677899999999999985 66777888876 8888774211222222 25789999999999
Q ss_pred CcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccCC----CC-C----cCcEEEEcccccccCCCCceEEEEEecC
Q psy12791 155 PLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQKS----LP-W----GVDIVLYSLTKYMNGHSDVVMGATVTND 222 (393)
Q Consensus 155 ptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~~----~~-~----~~di~~~S~sK~~~G~~G~r~G~~~~~~ 222 (393)
|||.+++ +++|.++|+++ +++||+||+|..+.+... +. . +..++++||||.+ |+||+|+||++++
T Consensus 188 PTG~~~s~~~~~~l~~~a~~~-~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~~pGlRiG~~i~~- 264 (409)
T PRK07590 188 PTGTVLTKEQLKAWVDYAKEN-GSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTA-GFTGTRCAYTVVP- 264 (409)
T ss_pred CcCCcCCHHHHHHHHHHHHHc-CeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCcccc-CCcCceeEEEEcC-
Confidence 9999998 66777888999 999999999998654321 11 1 2458899999999 7999999999997
Q ss_pred hHHHHHH------------HHHHHhcCCCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhC
Q psy12791 223 DSLQARL------------KFLQNSMGVVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 223 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
+++++.+ ...........+...+.++...+. .+...++...++++.+.+.|+.+
T Consensus 265 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 335 (409)
T PRK07590 265 KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA 335 (409)
T ss_pred HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7777621 111111112334444444433332 23334555566777788888765
No 123
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.97 E-value=1.2e-29 Score=244.33 Aligned_cols=287 Identities=20% Similarity=0.189 Sum_probs=211.8
Q ss_pred CchHHHHHHHHHHHhC----C---CcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee
Q psy12791 58 NPTRRNLERCIASLEE----A---KHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV 128 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~----~---~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~ 128 (393)
..+..+||+.+++++. . +++|++|+|++. + .++..+++|||.|++.+|+|.+ ..++++..|++++.+
T Consensus 131 ~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~----~~~~~~~~g~~~~~v 206 (459)
T COG1167 131 TAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPG----ALQALEALGARVIPV 206 (459)
T ss_pred CCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHH----HHHHHHHcCCcEEec
Confidence 3788899999999864 2 268999999886 7 6677788999999999999995 667788999999999
Q ss_pred CCC----CHHHHHhhcCC-CCcEEEE-ecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC-CC------
Q psy12791 129 DLR----KIENLIKYIKP-NTKMVWI-ENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK-SL------ 192 (393)
Q Consensus 129 ~~~----d~~~l~~~l~~-~~~~v~l-~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~-~~------ 192 (393)
|.+ |++.+++.+.. ++|++|+ .+.+||||.+++ +++|.++|++| +++||+|+.|+.+.+.. +.
T Consensus 207 p~d~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~-~~~IIEDD~y~el~~~~~p~~~l~~l 285 (459)
T COG1167 207 PVDEDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKY-DVLIIEDDYYGELRYDGPPPPPLKAL 285 (459)
T ss_pred CCCCCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHc-CCeEEeeCcchhhhcCCCCCCChHhh
Confidence 997 79999999875 5899888 588999999998 77999999999 99999999999977652 22
Q ss_pred C-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhcc------CCHHHHHHHHHHH
Q psy12791 193 P-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGL------KTLPCRLKEHERG 265 (393)
Q Consensus 193 ~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 265 (393)
+ .+..++++||||.+ .||+|+||++++ +++++.+...........+...+..+..-+ +.+...+..+.++
T Consensus 286 d~~~rViy~gSFSK~l--~PglRlG~vv~p-~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~r 362 (459)
T COG1167 286 DAPGRVIYLGSFSKTL--APGLRLGYVVAP-PELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARR 362 (459)
T ss_pred CCCCCEEEEeeehhhc--ccccceeeeeCC-HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 1 25779999999999 599999999998 899998887777666666666544333222 1233344555666
Q ss_pred HHHHHHHHhhCC-CcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcccccccc-CCccccccC
Q psy12791 266 SIEVAKFLESHP-CVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESL-GGIESLADL 343 (393)
Q Consensus 266 ~~~l~~~l~~~~-~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~~~s~~~~ 343 (393)
...+.+.|.++. ....+..|. .|.++|+++++ ..+...+.......++.+.+ |..+.....
T Consensus 363 r~~l~~~L~~~~~~~~~~~~p~----------------gG~flwl~l~~-~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~ 425 (459)
T COG1167 363 RDALLEALAEYLPELATWTRPE----------------GGLFLWLELPE-GIDARELLAAALEKGVVVTPLGSAFSADGD 425 (459)
T ss_pred HHHHHHHHHHhCCCCeeeecCC----------------ceEEEEEEcCC-CCCHHHHHHHHHHCCCEEEcCCccccCCCC
Confidence 777788887653 244444444 24568999963 33344455554444555555 544432211
Q ss_pred cccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 344 PAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
..+++||+++..+.+++.+.+....+
T Consensus 426 -------------------~~~~~Rl~~s~~~~e~i~~gi~~l~~ 451 (459)
T COG1167 426 -------------------PRNGLRLSFSSPSEEEIEEGIKRLAA 451 (459)
T ss_pred -------------------CCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 25799999999997777666554433
No 124
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.97 E-value=1.3e-30 Score=236.28 Aligned_cols=317 Identities=21% Similarity=0.229 Sum_probs=232.9
Q ss_pred CCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHH--hc----CCCCeEEEcCCCccchHHHHHH
Q psy12791 46 QPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTH--LL----SAGDHIISGDDVYGGTYRYFAQ 116 (393)
Q Consensus 46 ~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~--~~----~~gd~vl~~~~~y~~~~~~~~~ 116 (393)
++...|.|++-.....++.|+.+|+++|++ +.|++|||.++ . .++.. .. +.|.+|+++..+|+++.+....
T Consensus 31 NPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~ 110 (386)
T COG1104 31 NPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRY 110 (386)
T ss_pred CccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHH
Confidence 334567777766677889999999999987 68999999776 5 56654 21 2578999999999998777766
Q ss_pred hcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC
Q psy12791 117 VAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS 191 (393)
Q Consensus 117 ~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~ 191 (393)
. +..|.+|.+++++ |+++|+++++++|.+|.+.+.||.||+++|+++|.++|+++ ++++++|.+++.+.....
T Consensus 111 L-e~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~-~i~fHvDAvQa~Gkipi~ 188 (386)
T COG1104 111 L-ERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKER-GILFHVDAVQAVGKIPID 188 (386)
T ss_pred H-HhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHc-CCeEEEehhhhcCceecc
Confidence 5 7789999999997 89999999999999999999999999999999999999999 999999999997765433
Q ss_pred CC-CcCcEEEEcccccccCCCCceEEEEEecChHHHHH-HHHHHH----hcCCCCCHHHHHHH---HhccCCHHHHHHHH
Q psy12791 192 LP-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQAR-LKFLQN----SMGVVPSPFDCWLV---TRGLKTLPCRLKEH 262 (393)
Q Consensus 192 ~~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 262 (393)
+. .+.|+...|.||.+ ||.| +|+++.++..-.+. +..-.+ ..|....+....+. ....+.+.....+.
T Consensus 189 ~~~~~vD~ls~SaHK~~-GpkG--iGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~ 265 (386)
T COG1104 189 LEELGVDLLSFSAHKFG-GPKG--IGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARL 265 (386)
T ss_pred ccccCcceEEeehhhcc-CCCc--eEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 37899999999999 7999 99999863222221 110000 01222222222221 12223444455555
Q ss_pred HHHHHHHHHHHhhC-CCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccc
Q psy12791 263 ERGSIEVAKFLESH-PCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLA 341 (393)
Q Consensus 263 ~~~~~~l~~~l~~~-~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~ 341 (393)
...+.++.+.|... |.+. ..+-. ....++.+.|.+++ -+.+.++-.|+..++++|.|+.|+..
T Consensus 266 ~~lr~~l~~~l~~~~p~~~---~~g~~-----------~~rlP~~~~~~f~g--v~gE~ll~~L~~~gI~vStGSACsS~ 329 (386)
T COG1104 266 RKLRDRLEDGLLEIIPDVY---LNGDD-----------EPRLPNILNFSFPG--VEGESLLLALDLAGIAVSTGSACSSG 329 (386)
T ss_pred HHHHHHHHHHHHhcCCcEE---EcCCc-----------ccCCCCeEEEEeCC--CcHHHHHHhccccCeEEeccccccCC
Confidence 56666777777654 5432 11100 02246789999965 67788888899889999999987655
Q ss_pred cCcccccCCCCChhhHhhcCCC----CCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 342 DLPAEMTHKSIPKETRDALGIT----DNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~g~~----~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
... +.+...++|.+ .+.||||+|..+++++++.+.++++++.
T Consensus 330 ~~~--------pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i 375 (386)
T COG1104 330 SLE--------PSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEII 375 (386)
T ss_pred CCC--------ccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 332 44566666764 5899999999999999999999998765
No 125
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.97 E-value=1.8e-29 Score=246.25 Aligned_cols=217 Identities=13% Similarity=0.114 Sum_probs=161.2
Q ss_pred CchHHHHHHHHHHHhC------C-CcEEEeccHHHH-H-HHHHHhc-CCCCeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 58 NPTRRNLERCIASLEE------A-KHGLCYSSGLGA-V-TAVTHLL-SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~------~-~~~i~~~~G~~a-l-~~~~~~~-~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
..+..+||+++|++++ . +++|++|+|+++ + .++..++ ++||.|+++.|+|+. |...++..|.+++.
T Consensus 114 ~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~----y~~~~~~~g~~~v~ 189 (481)
T PTZ00377 114 SAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPL----YSAAITLLGGKQVP 189 (481)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchh----HHHHHHHcCCEEEE
Confidence 3478899999999864 2 278999999886 7 6666777 799999999999984 77778889999998
Q ss_pred eCCC-------CHHHHHhhcCC------CCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC-
Q psy12791 128 VDLR-------KIENLIKYIKP------NTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK- 190 (393)
Q Consensus 128 ~~~~-------d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~- 190 (393)
++++ |++++++.+.+ +++++++++||||||.+++ +++|+++|+++ +++||+||+|..+.+..
T Consensus 190 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~-~~~iI~De~Y~~l~~~~~ 268 (481)
T PTZ00377 190 YYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEK-GIVLMADEVYQENIYDGE 268 (481)
T ss_pred EEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHC-CCEEEEehhhHhhccCCC
Confidence 8764 57888888764 7899999999999999999 78889999999 99999999999865421
Q ss_pred -CC--------CC-------cCcEEEEcccccccCCCCceEEEEEe--cChHHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Q psy12791 191 -SL--------PW-------GVDIVLYSLTKYMNGHSDVVMGATVT--NDDSLQARLKFLQNSMGVVPSPFDCWLVTRGL 252 (393)
Q Consensus 191 -~~--------~~-------~~di~~~S~sK~~~G~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (393)
+. .. ...++++||||.+.|++|+|+||+++ .++++++.+....... .+.+...+.++...+
T Consensus 269 ~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~-~~~~~~~Q~a~~~~l 347 (481)
T PTZ00377 269 KPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASIN-LCSNVVGQLMTGLMC 347 (481)
T ss_pred CCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhhee-cCCChHHHHHHHHHh
Confidence 11 01 13588999999744799999999997 2388888887765432 234444444444433
Q ss_pred CC----------HHHHHH----HHHHHHHHHHHHHhhCCCcc
Q psy12791 253 KT----------LPCRLK----EHERGSIEVAKFLESHPCVK 280 (393)
Q Consensus 253 ~~----------~~~~~~----~~~~~~~~l~~~l~~~~~~~ 280 (393)
+. +...++ .+.+++..+.+.|+.++++.
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~ 389 (481)
T PTZ00377 348 NPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS 389 (481)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 21 222222 23566677788888766544
No 126
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.1e-29 Score=242.85 Aligned_cols=248 Identities=20% Similarity=0.284 Sum_probs=176.0
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhC-----CC-cEEEeccHHHH-H-HHHHHh
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEE-----AK-HGLCYSSGLGA-V-TAVTHL 93 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~-----~~-~~i~~~~G~~a-l-~~~~~~ 93 (393)
+.++ +.+.+|+.+++.+.+.+.+.......|. +..+..++|+++|++++ .+ +.|++|+|+++ + .++..+
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l 108 (397)
T PRK07568 31 KVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAYS--HSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAI 108 (397)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHhcCCcCcC--CCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHh
Confidence 3555 6667777666555554433212222233 23578899999999873 33 67888888775 7 666677
Q ss_pred cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--------CHHHHHhhcCCCCcEEEEecCCCCcccccC---H
Q psy12791 94 LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---V 162 (393)
Q Consensus 94 ~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~ 162 (393)
+++||+|++++|+|.. +...++..|++++.++.+ +++++++.+++++++|++++|+||||.+++ +
T Consensus 109 ~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~ 184 (397)
T PRK07568 109 CDPGDEILVPEPFYAN----YNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEEL 184 (397)
T ss_pred cCCCCEEEEecCCCcc----HHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHH
Confidence 8999999999999984 555567889999888763 358888888888999999999999999997 7
Q ss_pred HHHHHHHHhCCCcEEEEeCccCcccccC----C-CC----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH
Q psy12791 163 KAISAVVKQHPDILLVLDNTFLTAYYQK----S-LP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ 233 (393)
Q Consensus 163 ~~l~~l~~~~~~~~livDea~~~~~~~~----~-~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~ 233 (393)
++|.++|+++ ++++|+|++|..+.+.. + .. ....++++||||.+ |++|+|+||++++++++++.+....
T Consensus 185 ~~i~~~~~~~-~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~-~~~G~R~G~~~~~~~~~~~~~~~~~ 262 (397)
T PRK07568 185 EMLAEIAKKH-DLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRY-SACGARIGCLISKNKELIAAAMKLC 262 (397)
T ss_pred HHHHHHHHHC-CcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhc-cCCCcceEEEecCCHHHHHHHHHHh
Confidence 7889999999 99999999999765321 1 11 23569999999999 6999999999986577887765443
Q ss_pred HhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCc
Q psy12791 234 NSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCV 279 (393)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~ 279 (393)
.. ....+...+..+...++. +...++...+++..+.+.|+.++++
T Consensus 263 ~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 311 (397)
T PRK07568 263 QA-RLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGV 311 (397)
T ss_pred hc-cCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 32 223344444444443332 3334455667777888888766543
No 127
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.1e-29 Score=243.00 Aligned_cols=273 Identities=18% Similarity=0.143 Sum_probs=183.1
Q ss_pred CchHHHHHHHHHHHh----CCC---c-EEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 58 NPTRRNLERCIASLE----EAK---H-GLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 58 ~~~~~~lr~~la~~~----~~~---~-~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
..+..+||+++|+++ |.+ + +|++|+|+++ + .++.+++++||.|++++|+|+. +...++..|++++.
T Consensus 70 ~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~ 145 (403)
T PRK08636 70 SKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPI----HSQAFILAGGNVHK 145 (403)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcc----hHHHHHhcCCEEEE
Confidence 357788999999986 532 4 7999999876 7 6777889999999999999985 67778889999998
Q ss_pred eCCC-------CHH----HHHhhcC---CCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC
Q psy12791 128 VDLR-------KIE----NLIKYIK---PNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK 190 (393)
Q Consensus 128 ~~~~-------d~~----~l~~~l~---~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~ 190 (393)
++.+ |++ .+++++. ++++++++++||||||.+++ +++|.++|+++ +++||+||+|..+.+..
T Consensus 146 v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~-~~~II~De~Y~~l~~~~ 224 (403)
T PRK08636 146 MPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKE-RFYIISDIAYADITFDG 224 (403)
T ss_pred EeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc-CcEEEEeccchhhccCC
Confidence 8752 344 3455553 46899999999999999998 67788889999 99999999999865431
Q ss_pred ----C---CCC--cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccC---C-HHH
Q psy12791 191 ----S---LPW--GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLK---T-LPC 257 (393)
Q Consensus 191 ----~---~~~--~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~ 257 (393)
+ ++. +..++++||||.+ |.||+|+||++++ +++++.+...........+...+..+...++ . +..
T Consensus 225 ~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~GlRiG~iv~~-~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~ 302 (403)
T PRK08636 225 YKTPSILEVEGAKDVAVESYTLSKSY-NMAGWRVGFVVGN-KKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEE 302 (403)
T ss_pred CCCCChhcCCCccccEEEEEeccccc-CCccceeeeeeCC-HHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHH
Confidence 1 111 2346689999999 7999999999987 8888888766553322222222222222222 1 223
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH--HHHHHHHHh-cCcccccccc
Q psy12791 258 RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA--EETRIFLES-LLIFRCAESL 334 (393)
Q Consensus 258 ~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-l~~~~~~~~~ 334 (393)
.++.+.+++..+.+.|+.. ++. +..|. .|.++|+.+++.. .....+.+. ++..++.+.+
T Consensus 303 ~~~~~~~~~~~l~~~L~~~-~~~-~~~p~----------------~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~p 364 (403)
T PRK08636 303 IRETYRKRRDVLIESFANA-GWE-LQKPR----------------ASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSP 364 (403)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCc-ccCCC----------------cceEEEEECCCccCCCCHHHHHHHHHHhCCEEEec
Confidence 3444556667777888764 222 22222 2467899885311 112334433 3334555655
Q ss_pred CCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChH
Q psy12791 335 GGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYT 377 (393)
Q Consensus 335 g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~ 377 (393)
|..+.. ..++++||+++ .+.+
T Consensus 365 g~~f~~---------------------~~~~~iRi~~~-~~~~ 385 (403)
T PRK08636 365 GIGFGE---------------------YGDEYVRIALI-ENEN 385 (403)
T ss_pred chhhCc---------------------CCCCeEEEEec-CCHH
Confidence 544310 11479999998 3443
No 128
>PRK08363 alanine aminotransferase; Validated
Probab=99.97 E-value=7.2e-30 Score=243.98 Aligned_cols=249 Identities=17% Similarity=0.186 Sum_probs=174.0
Q ss_pred CCCC-CCCCC---CCccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHHh----C--CC-cEEEeccHHHH-H-H
Q psy12791 23 QWRS-QCVIP---PIILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASLE----E--AK-HGLCYSSGLGA-V-T 88 (393)
Q Consensus 23 ~~~~-~~~~~---p~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~~----~--~~-~~i~~~~G~~a-l-~ 88 (393)
+.++ +...+ ++.+++.+.+.+.+.+... ...| +.++..+||+++|+++ | .+ ++|++|+|+++ + .
T Consensus 31 ~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~ 108 (398)
T PRK08363 31 KVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG--HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQL 108 (398)
T ss_pred CeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC--CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence 4556 44444 4666666655544332111 1234 3577899999999987 3 22 67888888765 7 6
Q ss_pred HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee-CCC------CHHHHHhhcCCCCcEEEEecCCCCcccccC
Q psy12791 89 AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV-DLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFD 161 (393)
Q Consensus 89 ~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~-~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 161 (393)
++.+++++||.|++++|+|.. +...++..|.+++.+ +.+ |++++++.+.+++++|++++||||||.+++
T Consensus 109 ~~~~~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 184 (398)
T PRK08363 109 IFGALLDPGDEILIPGPSYPP----YTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYE 184 (398)
T ss_pred HHHHhCCCCCEEEEcCCCCcc----hHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcC
Confidence 667788999999999999985 566677888888777 332 678888888888999999999999999998
Q ss_pred ---HHHHHHHHHhCCCcEEEEeCccCcccccCC------CC-CcCcEEEEcccccccCCCCceEEEEEe-cChHHHHHHH
Q psy12791 162 ---VKAISAVVKQHPDILLVLDNTFLTAYYQKS------LP-WGVDIVLYSLTKYMNGHSDVVMGATVT-NDDSLQARLK 230 (393)
Q Consensus 162 ---~~~l~~l~~~~~~~~livDea~~~~~~~~~------~~-~~~di~~~S~sK~~~G~~G~r~G~~~~-~~~~~~~~~~ 230 (393)
+++|.++|+++ ++++|+||+|..+.+... +. ..+.++++||||.+ +.||+|+||+++ +++++++.+.
T Consensus 185 ~~~~~~l~~~a~~~-~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~~~~~~~~~~~~~l~ 262 (398)
T PRK08363 185 KKTLKEILDIAGEH-DLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVY-FATGWRLGYIYFVDPEGKLAEVR 262 (398)
T ss_pred HHHHHHHHHHHHHc-CeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhcc-CCccceEEEEEEeCcHHHHHHHH
Confidence 88889999999 999999999987544321 11 13468899999999 699999999998 3366666665
Q ss_pred HHHHhc---CCCCCHHHHHHHHhcc----CCHHHHHHHHHHHHHHHHHHHhhCCCc
Q psy12791 231 FLQNSM---GVVPSPFDCWLVTRGL----KTLPCRLKEHERGSIEVAKFLESHPCV 279 (393)
Q Consensus 231 ~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~ 279 (393)
...... ....+...+..+...+ +.+...++++.++...+.+.|+.++++
T Consensus 263 ~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~ 318 (398)
T PRK08363 263 EAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGI 318 (398)
T ss_pred HHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 433211 1223444433333333 224445566677777788888776553
No 129
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.97 E-value=6.6e-30 Score=241.43 Aligned_cols=210 Identities=17% Similarity=0.182 Sum_probs=157.2
Q ss_pred CCCC-chHHHHHHHHHHHh----C---CC-cEEEeccHHHH-H-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCC
Q psy12791 55 RSNN-PTRRNLERCIASLE----E---AK-HGLCYSSGLGA-V-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIG 122 (393)
Q Consensus 55 ~~~~-~~~~~lr~~la~~~----~---~~-~~i~~~~G~~a-l-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g 122 (393)
+|++ .+..++|+++|+++ | .+ ++|++|+|+++ + .++..+ +++||.|++++|+|+. +...++..|
T Consensus 57 ~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~----~~~~~~~~g 132 (364)
T PRK07865 57 GYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPT----YEVGARLAG 132 (364)
T ss_pred CCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCccc----HHHHHHhcC
Confidence 4443 46678999999987 3 43 78999999887 6 444555 6899999999999984 667778889
Q ss_pred cEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccCC-C------
Q psy12791 123 LEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQKS-L------ 192 (393)
Q Consensus 123 ~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~~-~------ 192 (393)
++++.++ +++++.. +++++|++++||||||.+++ +++|.++|+++ +++||+||+|..+.+..+ .
T Consensus 133 ~~~~~~~--~~~~l~~---~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~ 206 (364)
T PRK07865 133 ATVVRAD--SLTELGP---QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARER-GAVVASDECYLELGWDAEPVSILDPR 206 (364)
T ss_pred CEEEecC--ChhhCCc---ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEecchhhhccCCCCCcccccc
Confidence 9998875 4444432 57899999999999999998 56788888999 999999999997554321 1
Q ss_pred ----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC---HHHHHHHHHHH
Q psy12791 193 ----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT---LPCRLKEHERG 265 (393)
Q Consensus 193 ----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 265 (393)
...+.++++||||.+ |.+|+|+||++++ +++++.++......+...+...+..+...++. +...++...++
T Consensus 207 ~~~~~~~~~i~~~S~SK~~-~~~GlRiG~i~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 284 (364)
T PRK07865 207 VCGGDHTGLLAVHSLSKQS-NLAGYRAGFVAGD-PALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARR 284 (364)
T ss_pred ccCCccceEEEEeechhcc-CCCceeeEEEecC-HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 113569999999999 6999999999987 88888887766555555556555555555543 33344455566
Q ss_pred HHHHHHHHhhC
Q psy12791 266 SIEVAKFLESH 276 (393)
Q Consensus 266 ~~~l~~~l~~~ 276 (393)
...+.+.|+..
T Consensus 285 ~~~l~~~L~~~ 295 (364)
T PRK07865 285 RAVLRPALEAA 295 (364)
T ss_pred HHHHHHHHHHc
Confidence 67777777754
No 130
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=2.1e-29 Score=241.16 Aligned_cols=294 Identities=16% Similarity=0.173 Sum_probs=205.4
Q ss_pred chHHHHHHHHHHHhCC-C-cEEEeccHHHH-H-HHHHHh----cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 59 PTRRNLERCIASLEEA-K-HGLCYSSGLGA-V-TAVTHL----LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~-~-~~i~~~~G~~a-l-~~~~~~----~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
...+++|+.+|+++|+ + ++|++++|+++ + .++..+ +++||+|++++++|++.+..+...++..|++++.++.
T Consensus 63 ~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 142 (401)
T PRK10874 63 ARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPL 142 (401)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEec
Confidence 3467899999999998 4 68888888776 6 555554 4789999999999998777788888889999999886
Q ss_pred C-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEccc
Q psy12791 131 R-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLT 204 (393)
Q Consensus 131 ~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~s 204 (393)
+ |++++++.+.++|++|++++|+||||.++|+++|.++|+++ |+++++|++|+.+.....+ ..+.|+++.|+|
T Consensus 143 ~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~-g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~ 221 (401)
T PRK10874 143 GADRLPDVDLLPELITPRTRILALGQMSNVTGGCPDLARAITLAHQA-GMVVMVDGAQGAVHFPADVQALDIDFYAFSGH 221 (401)
T ss_pred CCCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCCHHHHHHHHHHc-CCEEEEECCcccccccCCchhcCCCEEEEecc
Confidence 4 68999999998999999999999999999999999999999 9999999999865442222 246899999999
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHHHH---------------------hcCCCCCHHHHHHHHhccCC-----HHHH
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKFLQN---------------------SMGVVPSPFDCWLVTRGLKT-----LPCR 258 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~-----~~~~ 258 (393)
|++ |++| +||++.+ +++++.+..... ...++.+......+..+++. ....
T Consensus 222 K~~-gp~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~ 297 (401)
T PRK10874 222 KLY-GPTG--IGVLYGK-SELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQA 297 (401)
T ss_pred ccc-CCCc--cEEEEEc-hHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHH
Confidence 987 7998 7999987 777776532210 00011221222222222222 2223
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCcc
Q psy12791 259 LKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIE 338 (393)
Q Consensus 259 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~ 338 (393)
.++..+....+.+.|+.++++..+..+ .++++.|.+++ . ..+.+.+.|...++.++.|..+
T Consensus 298 ~~~~~~l~~~l~~~l~~~~g~~~~~~~-----------------~~~i~~~~~~~-~-~~~~~~~~L~~~gI~v~~g~~~ 358 (401)
T PRK10874 298 ESWSRSLATLAEDALAKLPGFRSFRCQ-----------------DSSLLAFDFAG-V-HHSDLVTLLAEYGIALRAGQHC 358 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEeCCC-----------------CCcEEEEEECC-c-CHHHHHHHHHHCCcEEeccccc
Confidence 344445566677777766665422111 14678888743 1 1234444444456666665543
Q ss_pred ccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 339 SLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 339 s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.. ....+|. .++||+|++.++++++++.+.++|+++.
T Consensus 359 ~~~--------------~~~~~g~-~~~iRiS~~~~nt~edid~ll~al~~~~ 396 (401)
T PRK10874 359 AQP--------------LLAALGV-TGTLRASFAPYNTQSDVDALVNAVDRAL 396 (401)
T ss_pred hHH--------------HHHHhCC-CCEEEEEecccCCHHHHHHHHHHHHHHH
Confidence 210 0111222 4799999999999999999999998764
No 131
>PRK08175 aminotransferase; Validated
Probab=99.97 E-value=1e-29 Score=242.59 Aligned_cols=268 Identities=19% Similarity=0.159 Sum_probs=185.9
Q ss_pred chHHHHHHHHHHHh----CC--C-c-EEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee
Q psy12791 59 PTRRNLERCIASLE----EA--K-H-GLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV 128 (393)
Q Consensus 59 ~~~~~lr~~la~~~----~~--~-~-~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~ 128 (393)
.+..+||+++|+++ |. + + ++++|+|+++ + .++..++++||+|++++|+|+. +...++..|++++.+
T Consensus 67 ~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v 142 (395)
T PRK08175 67 RGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPI----HIYGAVIAGAQVRSV 142 (395)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcc----hHHHHHHcCCeEEEE
Confidence 46789999999975 33 2 4 7999999876 6 6666788999999999999985 455567789999988
Q ss_pred CCC----CHHHHHhhcC---CCCcEEEEecCCCCcccccCH---HHHHHHHHhCCCcEEEEeCccCcccccC----CC--
Q psy12791 129 DLR----KIENLIKYIK---PNTKMVWIENPTNPLMTVFDV---KAISAVVKQHPDILLVLDNTFLTAYYQK----SL-- 192 (393)
Q Consensus 129 ~~~----d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~---~~l~~l~~~~~~~~livDea~~~~~~~~----~~-- 192 (393)
+.+ +.+++++.+. +++++|++++||||||.+++. ++|.++|+++ |+++|+||+|.++.+.. ++
T Consensus 143 ~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~-~i~ii~De~y~~l~~~~~~~~~~~~ 221 (395)
T PRK08175 143 PLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRY-DVLVVHDLAYADIVYDGWKAPSIMQ 221 (395)
T ss_pred ecccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc-CcEEEEecchHhhccCCCCCcchhc
Confidence 875 3677777665 368999999999999999996 7888899999 99999999998765421 11
Q ss_pred -C--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHH
Q psy12791 193 -P--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERG 265 (393)
Q Consensus 193 -~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 265 (393)
. .+..++++||||.+ |.||+|+||++++ +++++.+...........+...+..+...++. +...++.+.++
T Consensus 222 ~~~~~~~~i~~~S~SK~~-g~pGlRiG~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 299 (395)
T PRK08175 222 VPGAKDVAVEFFTLSKSY-NMAGWRIGFMVGN-PELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRR 299 (395)
T ss_pred CCCcccCEEEEeeccccc-cCcchhheeeeCC-HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 1 13457899999999 7999999999987 88999887766543333333333333333322 33345556677
Q ss_pred HHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHH--HHHHHHHh-cCccccccccCCcccccc
Q psy12791 266 SIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAE--ETRIFLES-LLIFRCAESLGGIESLAD 342 (393)
Q Consensus 266 ~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-l~~~~~~~~~g~~~s~~~ 342 (393)
+..+.+.|+.. ++. +..|. .+.++|+.++.... ....+..+ ++..++.+..|..+..
T Consensus 300 ~~~~~~~L~~~-~~~-~~~p~----------------~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~-- 359 (395)
T PRK08175 300 RDVLVKGLHEA-GWM-VEMPK----------------ASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGD-- 359 (395)
T ss_pred HHHHHHHHHHc-CCc-ccCCC----------------EEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCc--
Confidence 77788888765 222 22221 25678999853211 23444443 3344666666544310
Q ss_pred CcccccCCCCChhhHhhcCCCCCeEEEEec
Q psy12791 343 LPAEMTHKSIPKETRDALGITDNLVRLSVG 372 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~g~~~~~iRls~~ 372 (393)
..++++||+++
T Consensus 360 -------------------~~~~~lRis~~ 370 (395)
T PRK08175 360 -------------------YGDTHVRFALI 370 (395)
T ss_pred -------------------CCCCeEEEEeC
Confidence 11478999997
No 132
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.97 E-value=1.7e-29 Score=237.82 Aligned_cols=295 Identities=15% Similarity=0.128 Sum_probs=193.7
Q ss_pred CCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh----C---CC-cEEEeccHHHH-H-H
Q psy12791 21 PDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE----E---AK-HGLCYSSGLGA-V-T 88 (393)
Q Consensus 21 ~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~----~---~~-~~i~~~~G~~a-l-~ 88 (393)
+.+.++ +.+.+...+++.+.+.+.+. . ....|++ .+..+||+++++++ | .+ ++|++|+|+++ + .
T Consensus 20 ~~~~i~l~~~~p~~~~~~~~~~~~~~~-~---~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~ 95 (357)
T TIGR03539 20 PDGIVDLSVGTPVDPVPPLIRAALAAA-A---DAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAW 95 (357)
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHH-H---hhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHH
Confidence 345566 55433333344444443222 1 2334544 45778999999987 3 43 79999999876 6 4
Q ss_pred HHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC---HHH
Q psy12791 89 AVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKA 164 (393)
Q Consensus 89 ~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~ 164 (393)
++..+ +++||.|++++|+|+. +...++..|++++.++ +++.+. .+++++|++++|+||||.+++ +++
T Consensus 96 ~~~~l~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~--~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~ 166 (357)
T TIGR03539 96 LPTLLGLGPGDTVVIPELAYPT----YEVGALLAGATPVAAD--DPTELD---PVGPDLIWLNSPGNPTGRVLSVDELRA 166 (357)
T ss_pred HHHHHcCCCCCEEEECCCCcHH----HHHHHHhcCCEEeccC--ChhhcC---ccCccEEEEeCCCCCcCccCCHHHHHH
Confidence 44455 6899999999999974 5666778899988875 444332 357899999999999999998 667
Q ss_pred HHHHHHhCCCcEEEEeCccCcccccC-CC----------CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH
Q psy12791 165 ISAVVKQHPDILLVLDNTFLTAYYQK-SL----------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ 233 (393)
Q Consensus 165 l~~l~~~~~~~~livDea~~~~~~~~-~~----------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~ 233 (393)
|.++|+++ |+++|+||+|.++.+.. +. .....++++||||.+ |++|+|+||++++ +++++.++...
T Consensus 167 i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~~G~R~G~~i~~-~~~~~~~~~~~ 243 (357)
T TIGR03539 167 IVAWARER-GAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRS-NLAGYRAGFVAGD-PALVAELLTVR 243 (357)
T ss_pred HHHHHHHc-CeEEEEecchhhhccCCCCccceecccCCCccccEEEEecccccc-CCCceeEEEEecC-HHHHHHHHHHH
Confidence 88889999 99999999998644321 11 123469999999999 6999999999987 88888887766
Q ss_pred HhcCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEE
Q psy12791 234 NSMGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFY 310 (393)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
...+...+...+..+...++. +...+..+.+++..+.+.|+.. ++. +..|. .+.++|+.
T Consensus 244 ~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~-~~~p~----------------~~~~~~~~ 305 (357)
T TIGR03539 244 KHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFR-IDHSE----------------AGLYLWAT 305 (357)
T ss_pred hhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCC-CcCCC----------------ccEEEEEE
Confidence 554555555555555555544 2233444556666777777654 222 11121 13457777
Q ss_pred EcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecC
Q psy12791 311 VNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV 373 (393)
Q Consensus 311 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 373 (393)
++.+ ...+.+.+...++.+.+|..+. . ..++++|+|++.
T Consensus 306 ~~~~---~~~~~~~l~~~gV~v~pg~~f~---~------------------~~~~~iRis~~~ 344 (357)
T TIGR03539 306 RGED---AWDTVDRLAELGILVAPGDFYG---P------------------AGSQHVRVALTA 344 (357)
T ss_pred CCCC---HHHHHHHHHhCCEEECCccccC---C------------------CCCCeEEEEecC
Confidence 7322 2334444544466665554321 0 015799999986
No 133
>PRK06855 aminotransferase; Validated
Probab=99.97 E-value=3.3e-29 Score=241.19 Aligned_cols=216 Identities=19% Similarity=0.284 Sum_probs=151.3
Q ss_pred CCchHHHHHHHHHHHh----CC--C-cEEEeccHHHH-HHHHHHhcCCCCeEEEcCCCccchHHHHHHh-cccCCcEEEe
Q psy12791 57 NNPTRRNLERCIASLE----EA--K-HGLCYSSGLGA-VTAVTHLLSAGDHIISGDDVYGGTYRYFAQV-APKIGLEVDF 127 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~----~~--~-~~i~~~~G~~a-l~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~-~~~~g~~v~~ 127 (393)
+..+..+||+++|+++ |. + ++|++|+|+++ +..+..++.+||.|++++|+|+. +... ....|++++.
T Consensus 71 ~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~l~~~Gd~Vlv~~P~Y~~----~~~~~~~~~g~~~v~ 146 (433)
T PRK06855 71 PTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYGLLRREARVIGPSPAYST----HSSAEAAHAGYPPVT 146 (433)
T ss_pred CCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHHhcCCCCeEEEeCCCCch----HHHHHHHhcCCeEEE
Confidence 3567889999999987 33 2 68999999876 63334578999999999999985 3322 2345778777
Q ss_pred eCCC-------CHHHHHhhcC--CCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC-C-CC
Q psy12791 128 VDLR-------KIENLIKYIK--PNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK-S-LP 193 (393)
Q Consensus 128 ~~~~-------d~~~l~~~l~--~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~-~-~~ 193 (393)
++.+ |++++++.+. ++++++++++||||||.+++ +++|.++|+++ +++||+||+|..+.+.. + ..
T Consensus 147 v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~-~~~II~De~Y~~l~~~~~~~~s 225 (433)
T PRK06855 147 YRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREY-DLFIICDEIYNNIVYNGKKTVP 225 (433)
T ss_pred EecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccccccCCCCCCC
Confidence 7643 6899998886 35799999999999999999 66778888999 99999999999875532 1 11
Q ss_pred -----C-cCcEEEEcccccccCCCCceEEEEEecC----hHHHHHHHHHHHh--cCCCCCHHHHHHHHhccCC------H
Q psy12791 194 -----W-GVDIVLYSLTKYMNGHSDVVMGATVTND----DSLQARLKFLQNS--MGVVPSPFDCWLVTRGLKT------L 255 (393)
Q Consensus 194 -----~-~~di~~~S~sK~~~G~~G~r~G~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------~ 255 (393)
. ...++++||||.+ ++||+|+||+++++ +.+.+.++..... .....+...+.++...++. +
T Consensus 226 l~~~~~~~~~I~~~S~SK~~-~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~ 304 (433)
T PRK06855 226 LSEVIGDVPGIALKGISKEL-PWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYL 304 (433)
T ss_pred HHHHcCcCCeEEEecCcccc-CCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHH
Confidence 1 2359999999999 69999999999832 3223333222211 1223344555555554432 3
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCC
Q psy12791 256 PCRLKEHERGSIEVAKFLESHPC 278 (393)
Q Consensus 256 ~~~~~~~~~~~~~l~~~l~~~~~ 278 (393)
...++.+.++++.+.+.|+.+++
T Consensus 305 ~~~~~~~~~r~~~~~~~L~~~~~ 327 (433)
T PRK06855 305 KERNKRYEKRSNIAYEKLKDVPG 327 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC
Confidence 33455556677777888876544
No 134
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.97 E-value=3.2e-29 Score=239.68 Aligned_cols=271 Identities=17% Similarity=0.169 Sum_probs=188.8
Q ss_pred CCchHHHHHHHHHHHhCC-------CcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 57 NNPTRRNLERCIASLEEA-------KHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~-------~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
+..+..++|+++|++++. ++.+++|+|+++ + .++.++..+||+|++++|+|.. +...++..|++++.
T Consensus 71 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~ 146 (403)
T TIGR01265 71 PSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPL----YDTRAAFSGLEVRL 146 (403)
T ss_pred CCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchh----HHHHHHHcCCEEEE
Confidence 456788899999999874 257778888665 7 6677778999999999999984 66677888999988
Q ss_pred eCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC-C---C-
Q psy12791 128 VDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK-S---L- 192 (393)
Q Consensus 128 ~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~-~---~- 192 (393)
++.+ |++++++.+.++++++++++||||||.+++ +++|.++|+++ |+++|+|++|.++.+.. + +
T Consensus 147 ~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~-~~~ii~De~y~~~~~~~~~~~~~~ 225 (403)
T TIGR01265 147 YDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKL-GIPIIADEIYGHMVFGDAPFIPMA 225 (403)
T ss_pred ecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEccccccccCCCCccchh
Confidence 8652 688999888888999999999999999997 78899999999 99999999999875432 1 1
Q ss_pred --C-CcCcEEEEcccccccCCCCceEEEEEecCh-H-----HHHHHHHHHHhcCCCCCHHHHHHHHhccC-----CHHHH
Q psy12791 193 --P-WGVDIVLYSLTKYMNGHSDVVMGATVTNDD-S-----LQARLKFLQNSMGVVPSPFDCWLVTRGLK-----TLPCR 258 (393)
Q Consensus 193 --~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 258 (393)
. ....++++||||.+ +.||+|+||++++++ . +.+.+...... ....+...+..+...++ .+...
T Consensus 226 ~~~~~~~vi~~~S~SK~~-~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~ 303 (403)
T TIGR01265 226 SFASIVPVLSLGGISKRW-VVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQR-ILGPATIVQGALPDILENTPQEFFDGK 303 (403)
T ss_pred hhccCCcEEEEeeccccc-CCCcceEEEEEEeCchhhhHHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHhChHHHHHHH
Confidence 1 12468999999999 699999999998533 2 33333333221 22334444444433332 23445
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH----HHHHHHHHh-cCccccccc
Q psy12791 259 LKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA----EETRIFLES-LLIFRCAES 333 (393)
Q Consensus 259 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-l~~~~~~~~ 333 (393)
++++.+++..+.+.|+.++++. +..|. .+.++|+.++... .....+.+. ++..++.+.
T Consensus 304 ~~~~~~~~~~l~~~L~~~~~~~-~~~p~----------------~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~ 366 (403)
T TIGR01265 304 ISVLKSNAELCYEELKDIPGLV-CPKPE----------------GAMYLMVKLELELFPEIKDDVDFCEKLVREESVICL 366 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCce-ecCCC----------------ceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEe
Confidence 5666677778888888765542 22332 2567888884210 123344444 344466666
Q ss_pred cCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC
Q psy12791 334 LGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE 374 (393)
Q Consensus 334 ~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~ 374 (393)
+|..+. .+++||+|++..
T Consensus 367 pg~~f~-----------------------~~~~iRis~~~~ 384 (403)
T TIGR01265 367 PGSAFG-----------------------LPNWVRITITVP 384 (403)
T ss_pred CccccC-----------------------CCCeEEEEecCC
Confidence 654431 157999999964
No 135
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.97 E-value=5.7e-29 Score=239.12 Aligned_cols=282 Identities=16% Similarity=0.180 Sum_probs=190.8
Q ss_pred chHHHHHHHHHHHhC--------CC-cEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcc-cCCcEEE
Q psy12791 59 PTRRNLERCIASLEE--------AK-HGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAP-KIGLEVD 126 (393)
Q Consensus 59 ~~~~~lr~~la~~~~--------~~-~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~-~~g~~v~ 126 (393)
.+..+||+++|++++ .+ ++|++|+|+++ + .++..++.+||.|+++.|+|++ +...+. ..|++++
T Consensus 95 ~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~----f~~~~~~~~g~~vv 170 (447)
T PLN02607 95 HGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPG----FDRDLRWRTGVKIV 170 (447)
T ss_pred cchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcc----hHHHHHhcCCcEEE
Confidence 477899999999874 22 68999999886 6 6666788999999999999985 444444 5789998
Q ss_pred eeCCC-------CHHHHHhhcCC------CCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC
Q psy12791 127 FVDLR-------KIENLIKYIKP------NTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK 190 (393)
Q Consensus 127 ~~~~~-------d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~ 190 (393)
.++.+ |++.+++++.+ ++|+++++|||||||.+++ +++|.++|+++ ++++|+||+|+...+..
T Consensus 171 ~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~-~i~lI~DEiYa~~~f~~ 249 (447)
T PLN02607 171 PIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRK-NIHLVSDEIYSGSVFSA 249 (447)
T ss_pred EEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CCEEEEeccccccccCC
Confidence 88764 57788877753 6899999999999999998 67788889999 99999999999754421
Q ss_pred C-C-------------C-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC-
Q psy12791 191 S-L-------------P-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT- 254 (393)
Q Consensus 191 ~-~-------------~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 254 (393)
+ . + ....+++.|+||.| |.+|+|+||+++.++.+.+.++..... . ..+...+.++...++.
T Consensus 250 ~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~f-g~~GlRvG~ivs~n~~l~~~~~~~~~~-~-~~s~~~q~~~~~~L~d~ 326 (447)
T PLN02607 250 SEFVSVAEIVEARGYKGVAERVHIVYSLSKDL-GLPGFRVGTIYSYNDKVVTTARRMSSF-T-LVSSQTQHLLASMLSDE 326 (447)
T ss_pred CCcccHHHHHhhcCCCCCcCcEEEEEcchhcC-CCCcceEEEEEEcCHHHHHHHHHHhhc-C-CCCHHHHHHHHHHhCCc
Confidence 1 0 1 23458899999999 799999999999657787776654432 2 2233344444444432
Q ss_pred ------HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-----HHHHHHHHH
Q psy12791 255 ------LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-----AEETRIFLE 323 (393)
Q Consensus 255 ------~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 323 (393)
+...++++.++.+.+.++|+.. ++. +..+ ..|.++|+.++.. .+....+.+
T Consensus 327 ~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~-~~~~----------------~ag~fvw~~L~~~~~~~~~~~e~~l~~ 388 (447)
T PLN02607 327 EFTENYIRTNRERLRKRYEMIVQGLRRA-GIE-CLKG----------------NAGLFCWMNLSPLLETPTREGELALWD 388 (447)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCC-cccC----------------CeeEEEEEEchHhhcCCCchhHHHHHH
Confidence 2233455566777788888764 222 1111 1256789988421 122234443
Q ss_pred hc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHH---HHHHHHHHH
Q psy12791 324 SL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTD---LIADLDQAL 387 (393)
Q Consensus 324 ~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~---~i~~l~~al 387 (393)
.+ +..++.+.+|..+.. ..++++|++++..+.+. -++++.+++
T Consensus 389 ~ll~~~gV~v~pG~~f~~---------------------~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l 435 (447)
T PLN02607 389 SILREVKLNISPGSSCHC---------------------SEPGWFRVCFANMSEDTLEVALKRIHRFM 435 (447)
T ss_pred HHHHhCCEEEcCccccCC---------------------CCCCEEEEEeccCCHHHHHHHHHHHHHHH
Confidence 33 344666777654321 12699999999744433 334444444
No 136
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.97 E-value=5.7e-29 Score=237.89 Aligned_cols=249 Identities=17% Similarity=0.214 Sum_probs=176.8
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh----CC---CcEEEeccHHH-HH-HHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE----EA---KHGLCYSSGLG-AV-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~----~~---~~~i~~~~G~~-al-~~~~ 91 (393)
+.++ +.+.+++.+++.+.+.+.+.+... ..+|++ .+..+||+++++++ |. +++|++|+|++ ++ .++.
T Consensus 34 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~ 111 (402)
T PRK06107 34 SIVDLTVGEPDFDTPDHIKQAAVAAIERG--ETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALM 111 (402)
T ss_pred CEEEcCCCCCCCCCCHHHHHHHHHHHHcC--CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHH
Confidence 4556 566666666665555443322111 123433 46678888887764 54 26788999865 57 6667
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
.++++||.|++++|+|.. |.......+..++.++.+ |++++++.+.+++++|++++|+||||.+++
T Consensus 112 ~~~~~gd~vl~~~p~y~~----y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~ 187 (402)
T PRK06107 112 ATLEAGDEVIIPAPYWVS----YPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAE 187 (402)
T ss_pred HhcCCCCEEEEecCCCcC----HHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHH
Confidence 788999999999999985 445556667777777652 568899988888999999999999999998
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC-CCC---------CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK-SLP---------WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKF 231 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~-~~~---------~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~ 231 (393)
+++|+++|++++++++|+||+|....+.. +.. .+..++++||||.+ |+||+|+||++++ +++.+.+..
T Consensus 188 ~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~pGlRiG~~~~~-~~~~~~~~~ 265 (402)
T PRK06107 188 LRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTY-AMTGWRIGYAAGP-ADLIAAINK 265 (402)
T ss_pred HHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhh-cCcccceeeeecC-HHHHHHHHH
Confidence 45667777885489999999998654321 111 13569999999999 6999999999997 889998887
Q ss_pred HHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCc
Q psy12791 232 LQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCV 279 (393)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~ 279 (393)
.........+...+.++...++. +...++.+.+++..+.+.|++++++
T Consensus 266 ~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~ 317 (402)
T PRK06107 266 LQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGL 317 (402)
T ss_pred HHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 77665566666666666555432 3344555667777788888766543
No 137
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=7.7e-29 Score=237.06 Aligned_cols=293 Identities=16% Similarity=0.145 Sum_probs=204.7
Q ss_pred hHHHHHHHHHHHhCCC--cEEEeccHHHH-H-HHHHHh----cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 60 TRRNLERCIASLEEAK--HGLCYSSGLGA-V-TAVTHL----LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~--~~i~~~~G~~a-l-~~~~~~----~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
..+++|+.+|+++|.+ ++|++++|+++ + .++.++ +++||+|++++++|++.+..+...++..|++++.++.+
T Consensus 61 ~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 140 (398)
T TIGR03392 61 RYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIG 140 (398)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecC
Confidence 3567999999999984 68888888776 6 555555 47899999999999987666777788999999999874
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEcccc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTK 205 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK 205 (393)
|++++++.+.++|++|++++|+||||.++|+++|.++|+++ |+++++|++|+.+...... ..+.|+++.|+||
T Consensus 141 ~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~-~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K 219 (398)
T TIGR03392 141 ADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPDLARAITLAHQY-GAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHK 219 (398)
T ss_pred CCCCcCHHHHHHHhccCceEEEEECccccccccCCHHHHHHHHHHc-CCEEEEEhhhhcCCCCCChhhcCCCEEEEeccc
Confidence 68999999988999999999999999999999999999999 9999999999865543222 2468999999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHHh---------------------cCCCCCHHHHHHHHhccCC-----HHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQNS---------------------MGVVPSPFDCWLVTRGLKT-----LPCRL 259 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~-----~~~~~ 259 (393)
.+ |++| +||++.+ +++++.+...... -.++.+......+..+++. +....
T Consensus 220 ~~-gp~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~ 295 (398)
T TIGR03392 220 LY-GPTG--IGVLYGK-TELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAE 295 (398)
T ss_pred cc-CCCc--eEEEEEc-HHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Confidence 88 7888 8999987 7777665321100 0011221122222222221 22233
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccc
Q psy12791 260 KEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIES 339 (393)
Q Consensus 260 ~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s 339 (393)
++..+..+.+.+.|+.++++.....+ .+++++|.+++ . ..+.+.+.|...++.++.|..++
T Consensus 296 ~~~~~l~~~l~~~l~~l~g~~~~~~~-----------------~~~i~~~~~~~-~-~~~~l~~~L~~~gI~v~~g~~~~ 356 (398)
T TIGR03392 296 AWSVSLADLAEERLAQLPGFRSFRCP-----------------GSSLLAFDFAG-V-HHSDLAALLAESGIALRAGQHCA 356 (398)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEeCCC-----------------CCcEEEEEeCC-c-CHHHHHHHHHhCCEEEecCccch
Confidence 44445566667777766665321111 14678888753 1 12345555555577777665443
Q ss_pred cccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 340 LADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.. ....+|. +++||+|++.++|+++++.+.++|+++.
T Consensus 357 ~~--------------~~~~~g~-~~~iRvS~~~~~t~~ei~~l~~~l~~~~ 393 (398)
T TIGR03392 357 QP--------------LMAALGV-SGTLRASFAPYNTQQDVDALVDAVGAAL 393 (398)
T ss_pred HH--------------HHHHhCC-CCEEEEEeeccCCHHHHHHHHHHHHHHH
Confidence 11 0011222 4799999999999999999999998764
No 138
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=3.9e-29 Score=239.58 Aligned_cols=294 Identities=16% Similarity=0.168 Sum_probs=206.6
Q ss_pred chHHHHHHHHHHHhCC-C-cEEEeccHHHH-H-HHHHH----hcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 59 PTRRNLERCIASLEEA-K-HGLCYSSGLGA-V-TAVTH----LLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~-~-~~i~~~~G~~a-l-~~~~~----~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
...+++|+++|+++|. + +.|++++|+++ + .++.. .+++||+|++++++|++++..+...++..|++++.++.
T Consensus 67 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 146 (406)
T PRK09295 67 EKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPL 146 (406)
T ss_pred HHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEec
Confidence 3467899999999997 3 68888888776 6 44443 46899999999999998877788888889999999876
Q ss_pred C-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEccc
Q psy12791 131 R-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLT 204 (393)
Q Consensus 131 ~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~s 204 (393)
+ |++++++.+++++++|++++|+||||.++|+++|.++|+++ |+++++|++|+.+....++ ..++|+++.|+|
T Consensus 147 ~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~-~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~ 225 (406)
T PRK09295 147 NPDGTLQLETLPALFDERTRLLAITHVSNVLGTENPLAEMIALAHQH-GAKVLVDGAQAVMHHPVDVQALDCDFYVFSGH 225 (406)
T ss_pred CCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCCHHHHHHHHHHc-CCEEEEEcccccCccccCchhcCCCEEEeehh
Confidence 4 78999999988999999999999999999999999999999 9999999999876543333 257899999999
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHHHHh----------------------cCCCCCHHHHHHHHhccCC-----HHH
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKFLQNS----------------------MGVVPSPFDCWLVTRGLKT-----LPC 257 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~-----~~~ 257 (393)
|.+ |++| +||++.+ +++.+.+...... ..++.+......+..+++. .+.
T Consensus 226 K~~-gp~G--~G~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~ 301 (406)
T PRK09295 226 KLY-GPTG--IGILYVK-EALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNN 301 (406)
T ss_pred hcc-CCCC--cEEEEEc-hHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHH
Confidence 977 7888 8999997 6666654321110 0112222222222222222 222
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhcCccccccccCC
Q psy12791 258 RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESLLIFRCAESLGG 336 (393)
Q Consensus 258 ~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~g~ 336 (393)
..++..+....+.+.|++++++..+ .|. ...+++.|.+++ +.++ +.+.|...++.++.|.
T Consensus 302 i~~~~~~l~~~l~~~l~~~~~~~~~-~~~---------------~~~~iv~~~~~~~~~~~---~~~~L~~~gI~v~~g~ 362 (406)
T PRK09295 302 IAEYEQNLMHYALSQLESVPDLTLY-GPQ---------------NRLGVIAFNLGKHHAYD---VGSFLDNYGIAVRTGH 362 (406)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEe-CCC---------------CCceEEEEEECCcCHHH---HHHHHHhCCeEEeccc
Confidence 3334444555666677666655322 121 024788888853 3333 3344444566666665
Q ss_pred ccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 337 IESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 337 ~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.|+... ...+|. ++.+|+|++.++++++++.+.++|+++.
T Consensus 363 ~c~~~~--------------~~~~~~-~~~iRiS~~~ynt~~did~l~~~l~~i~ 402 (406)
T PRK09295 363 HCAMPL--------------MAYYNV-PAMCRASLAMYNTHEEVDRLVAGLQRIH 402 (406)
T ss_pred cchHHH--------------HHHHCC-CCEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence 443110 111222 4789999999999999999999998875
No 139
>PRK07777 aminotransferase; Validated
Probab=99.97 E-value=4.7e-29 Score=237.55 Aligned_cols=272 Identities=18% Similarity=0.186 Sum_probs=186.9
Q ss_pred chHHHHHHHHHHH----hCCC---c-EEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee
Q psy12791 59 PTRRNLERCIASL----EEAK---H-GLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV 128 (393)
Q Consensus 59 ~~~~~lr~~la~~----~~~~---~-~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~ 128 (393)
.+..++|++++++ +|.+ + +|++|+|+++ + .++..++++||+|+++.|+|+. +...++..|.+++.+
T Consensus 61 ~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~----~~~~~~~~g~~~~~~ 136 (387)
T PRK07777 61 PGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDS----YAAVIAMAGAHRVPV 136 (387)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchh----hHHHHHHCCCEEEEe
Confidence 5688999999986 3543 3 6888888665 7 6677888999999999999985 566677889888887
Q ss_pred CCC--------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC----CCC
Q psy12791 129 DLR--------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK----SLP 193 (393)
Q Consensus 129 ~~~--------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~----~~~ 193 (393)
+.+ |++++++.+.+++++|++++||||||.+++ +++|.++|+++ ++++|+||+|..+.+.. ++.
T Consensus 137 ~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~ 215 (387)
T PRK07777 137 PLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEH-DLLVITDEVYEHLVFDGARHLPLA 215 (387)
T ss_pred ecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhc-CcEEEEeccchhcccCCCCcccHh
Confidence 653 678899988888999999999999999997 77889999999 99999999998755321 111
Q ss_pred -----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhcc---C-CHHHHHHHHHH
Q psy12791 194 -----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGL---K-TLPCRLKEHER 264 (393)
Q Consensus 194 -----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~ 264 (393)
.+++++++||||.+ |++|+|+||++++ +++++.+...........+...+..+...+ + .+...++.+.+
T Consensus 216 ~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 293 (387)
T PRK07777 216 TLPGMRERTVTISSAAKTF-NVTGWKIGWACGP-APLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQA 293 (387)
T ss_pred hCCCCcCcEEEEeechhhc-cCcCceeEEEecC-HHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 24679999999999 6999999999987 788888776554333222222222222222 2 23334556667
Q ss_pred HHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhc-CccccccccCCcccccc
Q psy12791 265 GSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESL-LIFRCAESLGGIESLAD 342 (393)
Q Consensus 265 ~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~ 342 (393)
++..+.+.|+++ ++. +..|. .+.++|+.+++ .......|.+.+ +..++.+.+|..+....
T Consensus 294 ~~~~l~~~L~~~-~~~-~~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~ 355 (387)
T PRK07777 294 KRDRLAAGLAEA-GFE-VHDSA----------------GTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPA 355 (387)
T ss_pred HHHHHHHHHHhC-CCC-ccCCC----------------cceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCC
Confidence 777888888764 222 11111 13457777631 111234555555 34466676665542110
Q ss_pred CcccccCCCCChhhHhhcCCCCCeEEEEecC
Q psy12791 343 LPAEMTHKSIPKETRDALGITDNLVRLSVGV 373 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 373 (393)
. ..++++||+++.
T Consensus 356 ~------------------~~~~~~Ri~~~~ 368 (387)
T PRK07777 356 D------------------AWNHLVRFAFCK 368 (387)
T ss_pred c------------------CCCCeEEEEecC
Confidence 0 125799999986
No 140
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.97 E-value=4.9e-30 Score=242.57 Aligned_cols=311 Identities=18% Similarity=0.194 Sum_probs=211.1
Q ss_pred CCCC-CCCCCCCc----cCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHhC------CC-c-EEEeccHHHH-H
Q psy12791 23 QWRS-QCVIPPII----LSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLEE------AK-H-GLCYSSGLGA-V 87 (393)
Q Consensus 23 ~~~~-~~~~~p~~----~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~~------~~-~-~i~~~~G~~a-l 87 (393)
+.|+ ++|.++.. +.+.+.++..+..........|++ .+..+||+++|++++ .+ + .+++++|+.+ +
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 3455 67777776 444444443320001122334434 468999999999988 33 5 8999999998 4
Q ss_pred HH-HHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCC------CCcEEEEecC
Q psy12791 88 TA-VTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKP------NTKMVWIENP 152 (393)
Q Consensus 88 ~~-~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~------~~~~v~l~~p 152 (393)
.. ...+ ..+||.|++++|+|+. +...++..|++++.++.+ |++++++.+++ ++++|++++|
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p 157 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPS----YIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNP 157 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTH----HHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESS
T ss_pred hhhhhcccccccccceecCCcccc----ccccccccCceeeeccccccccccccccccccccccccccccccceeeeccc
Confidence 44 4455 5699999999999994 778888999999999842 88999998876 5789999999
Q ss_pred CCCcccccCHHHHHH---HHHhCCCcEEEEeCccCcccccCC-----C---CC-cCcEEEEcccccccCCCCceEEEEEe
Q psy12791 153 TNPLMTVFDVKAISA---VVKQHPDILLVLDNTFLTAYYQKS-----L---PW-GVDIVLYSLTKYMNGHSDVVMGATVT 220 (393)
Q Consensus 153 ~nptG~~~~~~~l~~---l~~~~~~~~livDea~~~~~~~~~-----~---~~-~~di~~~S~sK~~~G~~G~r~G~~~~ 220 (393)
+||||.+++.+++.+ +|+++ ++++|+||+|..+.+..+ . .. ...++++|+||.+ |.+|+|+||+++
T Consensus 158 ~nPtG~~~~~~~l~~l~~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRvG~i~~ 235 (363)
T PF00155_consen 158 NNPTGSVLSLEELRELAELAREY-NIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSF-GLPGLRVGYIVA 235 (363)
T ss_dssp BTTTTBB--HHHHHHHHHHHHHT-TSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTT-TSGGGTEEEEEE
T ss_pred ccccccccccccccchhhhhccc-ccceeeeeceeccccCCCccCcccccccccccceeeeeccccc-cccccccccccc
Confidence 999999998555555 59999 999999999998776532 1 11 2359999999999 799999999999
Q ss_pred cChHHHHHHHHHHHhcCCCCCHHHHHHHHhccC-------CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcch
Q psy12791 221 NDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLK-------TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNH 293 (393)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~ 293 (393)
+ +++++.++.....+.. +...+.++...+. .+...++++.++...+.+.|++. ++. +..+.
T Consensus 236 ~-~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~-~~~~~------- 303 (363)
T PF00155_consen 236 P-PELIERLRRFQRSGLS--SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GIT-VLPPE------- 303 (363)
T ss_dssp E-HHHHHHHHHHHHHTTS--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSE-EEHHS-------
T ss_pred h-hhhhhhhhhccccccc--cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhh-eeecc-------
Confidence 6 8999999887776554 3333333222221 34456667777888888888765 333 22111
Q ss_pred HHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc-ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEec
Q psy12791 294 ELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF-RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVG 372 (393)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~ 372 (393)
.+.++|+.+. ......+.+.|... ++.+.+|..+. . ++++|+++
T Consensus 304 ---------~~~~~~~~~~--~~~~~~l~~~L~~~~gi~v~pg~~~~----------------------~-~~~iRi~~- 348 (363)
T PF00155_consen 304 ---------AGFFLWVRLD--PNDAEELAQELLEEYGILVRPGSYFG----------------------V-PGYIRISL- 348 (363)
T ss_dssp ---------BSSEEEEEES--HHHHHHHHHHHHHHHTEEEEEGGGGT----------------------S-TTEEEEEG-
T ss_pred ---------CccEEEEEcc--cchHHHHHHHHHHhCCEEEEecCCCC----------------------C-CCEEEEEe-
Confidence 1456777773 33455566655443 55555544321 1 58999999
Q ss_pred CCChHHHHHHHHHH
Q psy12791 373 VEGYTDLIADLDQA 386 (393)
Q Consensus 373 ~~~~~~~i~~l~~a 386 (393)
...+++.++.+.++
T Consensus 349 a~~~~e~~~~~~~~ 362 (363)
T PF00155_consen 349 ASHSEEDLEEALER 362 (363)
T ss_dssp GCSCHHHHHHHHHH
T ss_pred ccCCHHHHHHHHhh
Confidence 55555545555443
No 141
>PRK09082 methionine aminotransferase; Validated
Probab=99.97 E-value=3.3e-29 Score=238.35 Aligned_cols=244 Identities=16% Similarity=0.148 Sum_probs=173.2
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCC-CchHHHHHHHHHHH----hCCC----cEEEeccHHH-HH-HHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSN-NPTRRNLERCIASL----EEAK----HGLCYSSGLG-AV-TAV 90 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~-~~~~~~lr~~la~~----~~~~----~~i~~~~G~~-al-~~~ 90 (393)
+.++ +.+.+++.+++.+.+.+...... .+..|+ ..+..++|++++++ ++.+ +++++|+|++ ++ .++
T Consensus 31 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~ 108 (386)
T PRK09082 31 GAINLSQGFPDFDGPPYLVEALAYAMAA--GHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAI 108 (386)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHHc--CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHH
Confidence 3455 55556655555444433222111 122332 34567788888775 4543 3688888866 57 677
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
..++.+||+|++++|+|.. +...++..|.+++.++.+ |++++++.+.+++++|++++|+||||.+++
T Consensus 109 ~~~~~~gd~Vli~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~ 184 (386)
T PRK09082 109 LALVRPGDEVIVFDPSYDS----YAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAAD 184 (386)
T ss_pred HHHcCCCCEEEEeCCCchh----hHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHH
Confidence 7788999999999999985 566677789999999874 678999999888999999999999999986
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC----CC----C-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL----P-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL 232 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~----~~----~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~ 232 (393)
+++|.++|+++ ++++|+|++|..+.+.. .+ . .++.++++||||.+ |.+|+|+||++++ +++++.++..
T Consensus 185 ~~~i~~~a~~~-~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~iv~~-~~l~~~~~~~ 261 (386)
T PRK09082 185 MRALWQLIAGT-DIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTY-HVTGWKVGYCVAP-AALSAEFRKV 261 (386)
T ss_pred HHHHHHHHHHC-CEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhc-cchhhhhhhhhCC-HHHHHHHHHH
Confidence 77889999999 99999999998765421 11 1 24679999999999 6999999999997 8888888776
Q ss_pred HHhcCCCCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHhh
Q psy12791 233 QNSMGVVPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~ 275 (393)
........+...+..+...++ .+...++.+.++...+.+.|+.
T Consensus 262 ~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 308 (386)
T PRK09082 262 HQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALAN 308 (386)
T ss_pred HhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 654333444444443333332 1333345556777778888875
No 142
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.1e-28 Score=235.22 Aligned_cols=266 Identities=20% Similarity=0.236 Sum_probs=186.2
Q ss_pred CCchHHHHHHHHHHHhC------C-CcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 57 NNPTRRNLERCIASLEE------A-KHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~------~-~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
+..+..++|+.+|++++ . +++|++++|+++ + .++..++++||.|++++|+|.. +...++..|++++.
T Consensus 71 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~----~~~~~~~~g~~v~~ 146 (394)
T PRK06836 71 PNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVE----YRFYVDNHGGKLVV 146 (394)
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcc----HHHHHHHcCCEEEE
Confidence 45678899999999874 2 367888888765 7 6677788999999999999985 56667888999999
Q ss_pred eCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHh------CCCcEEEEeCccCcccccC-C
Q psy12791 128 VDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQ------HPDILLVLDNTFLTAYYQK-S 191 (393)
Q Consensus 128 ~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~------~~~~~livDea~~~~~~~~-~ 191 (393)
++.+ |++++++.+++++++|++++||||||.++| +++|.++|++ + ++++|+|++|.++.+.. +
T Consensus 147 v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~-~~~ii~De~y~~~~~~~~~ 225 (394)
T PRK06836 147 VPTDTDTFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGR-PIYLISDEPYREIVYDGAE 225 (394)
T ss_pred EecCCccCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCC-CeEEEEeccccccccCCCC
Confidence 9874 689999999888999999999999999998 6677777888 8 99999999999765421 1
Q ss_pred C-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHH---HHHH---HHhcC-CCCCHHHHHHHHhccCCHHHHH
Q psy12791 192 L-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQAR---LKFL---QNSMG-VVPSPFDCWLVTRGLKTLPCRL 259 (393)
Q Consensus 192 ~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~---~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 259 (393)
. ..++.++++||||.+ |.||+|+||++++ +.+.+. +... ....+ ...+...+..+...++.. ..+
T Consensus 226 ~~~~~~~~~~~i~~~S~SK~~-~~pGlRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~ 302 (394)
T PRK06836 226 VPYIFKYYDNSIVVYSFSKSL-SLPGERIGYIAVN-PEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT-VDV 302 (394)
T ss_pred CCChHHccCcEEEEecchhhc-cCcceeeEEEecC-HHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh-HHH
Confidence 1 124679999999999 6999999999997 555332 1111 11112 234444555555555442 234
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccc
Q psy12791 260 KEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIES 339 (393)
Q Consensus 260 ~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s 339 (393)
+.+.++...+.+.|+.+ ++. +..|. .+.++|+.++. . ....+.+.+...++.+..|..+.
T Consensus 303 ~~~~~~r~~l~~~L~~~-g~~-~~~~~----------------gg~~~~~~~~~-~-~~~~~~~~l~~~gv~v~~g~~f~ 362 (394)
T PRK06836 303 SIYKRNRDLLYDGLTEL-GFE-CVKPQ----------------GAFYLFPKSPE-E-DDVAFCEKAKKHNLLLVPGSGFG 362 (394)
T ss_pred HHHHHHHHHHHHHHHhC-CCE-eecCC----------------ceEEEEEeCCC-C-CHHHHHHHHHhCCEEEECchhcC
Confidence 55666777788888765 222 22222 13467877742 1 23344455555566666554331
Q ss_pred cccCcccccCCCCChhhHhhcCCCCCeEEEEecC
Q psy12791 340 LADLPAEMTHKSIPKETRDALGITDNLVRLSVGV 373 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 373 (393)
.++++||+++.
T Consensus 363 -----------------------~~~~iRi~~~~ 373 (394)
T PRK06836 363 -----------------------CPGYFRLSYCV 373 (394)
T ss_pred -----------------------CCCeEEEEecC
Confidence 14799999983
No 143
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.97 E-value=3.7e-28 Score=234.05 Aligned_cols=299 Identities=17% Similarity=0.166 Sum_probs=207.3
Q ss_pred hHHHHHHHHHHHhCCC--cEEEeccHHHH-H-HHHHH----hcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 60 TRRNLERCIASLEEAK--HGLCYSSGLGA-V-TAVTH----LLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~--~~i~~~~G~~a-l-~~~~~----~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
..+++|+.+|+++|.+ ++|++++|+++ + .++.. .+++||+|++++++|++++..+...++..|++++.++.+
T Consensus 77 ~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~ 156 (424)
T PLN02855 77 AYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLT 156 (424)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecC
Confidence 3578999999999984 58888888776 6 44433 368899999999999988777888888899999998764
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEcccc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTK 205 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK 205 (393)
|++++++.+.+++++|++++++||||.++|+++|.++|+++ |+++++|++|+.+.....+ ..++|+++.|+||
T Consensus 157 ~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~-g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K 235 (424)
T PLN02855 157 PDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAV-GAKVLVDACQSVPHMPVDVQTLGADFLVASSHK 235 (424)
T ss_pred CCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHc-CCEEEEEhhhhcCCcCCCchhcCCCEEEeeccc
Confidence 78999999988999999999999999999999999999999 9999999999865442222 2468999999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHHh---------------------cCCCCCHHHHHHHHhccC-----CHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQNS---------------------MGVVPSPFDCWLVTRGLK-----TLPCRL 259 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~-----~~~~~~ 259 (393)
++ |++| +||++.+ +++++++...... ..++......+.+...++ .+....
T Consensus 236 ~~-gp~G--~G~l~~~-~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~ 311 (424)
T PLN02855 236 MC-GPTG--IGFLWGK-SDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIH 311 (424)
T ss_pred cc-CCCc--cEEEEEc-hhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHH
Confidence 76 7888 8999997 6776665322100 001111111111222222 233334
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc-ccccccCCcc
Q psy12791 260 KEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF-RCAESLGGIE 338 (393)
Q Consensus 260 ~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~g~~~ 338 (393)
++..+..+.+.+.|+.++++. +..+. .... ...++++.|.+++ ...+.+.+.|... ++.++.|..|
T Consensus 312 ~~~~~l~~~l~~~L~~~~g~~-i~~~~-~~~~---------~~r~~~v~~~~~~--~~~~~v~~~L~~~~gI~v~~g~~c 378 (424)
T PLN02855 312 EYEVELGTYLYEKLSSVPGVR-IYGPK-PSEG---------VGRAALCAFNVEG--IHPTDLSTFLDQQHGVAIRSGHHC 378 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCC-cccc---------cCcccEEEEEECC--cCHHHHHHHhcccCCEEEechhhh
Confidence 444555666677777666654 22221 0000 0125788888853 2234566666544 6666666544
Q ss_pred ccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 339 SLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 339 s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+... ...+|. +++||+|++.++++++++.+.++|+++.
T Consensus 379 ~~~~--------------~~~~g~-~~~iRiS~~~ynt~~di~~l~~~l~~~~ 416 (424)
T PLN02855 379 AQPL--------------HRYLGV-NASARASLYFYNTKEEVDAFIHALKDTI 416 (424)
T ss_pred hHHH--------------HHHhCC-CCeEEEEeccCCCHHHHHHHHHHHHHHH
Confidence 3110 111233 4789999999999999999999998764
No 144
>PLN02672 methionine S-methyltransferase
Probab=99.97 E-value=2.1e-28 Score=249.56 Aligned_cols=248 Identities=13% Similarity=0.080 Sum_probs=177.8
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC----cEEEeccHHHH-H-HHHHHhc
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK----HGLCYSSGLGA-V-TAVTHLL 94 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~----~~i~~~~G~~a-l-~~~~~~~ 94 (393)
.+.++ +.|+||+.+++.+.+++.+.+.....+..++ ..+..+++.+++.+|.+ ++|++++|+++ + .++.+++
T Consensus 697 ~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~s~g~p-dlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl 775 (1082)
T PLN02672 697 SSLIHMDVDESFLPVPSAVKASIFESFVRQNISESET-DPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCV 775 (1082)
T ss_pred CCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCCCCCCh-HHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHc
Confidence 45667 8899999999888776654322111111122 23677888888877764 38999999998 5 5667889
Q ss_pred CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCC-CCcEEEEecCC-CCcccccC---H
Q psy12791 95 SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKP-NTKMVWIENPT-NPLMTVFD---V 162 (393)
Q Consensus 95 ~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~-~~~~v~l~~p~-nptG~~~~---~ 162 (393)
++||.|+++.|+|+ .|...++..|++++.++++ |++++++++.+ +.++|++++|| ||||.+++ +
T Consensus 776 ~pGD~VLVp~PtY~----~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeL 851 (1082)
T PLN02672 776 QEGGTLCFPAGSNG----TYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEI 851 (1082)
T ss_pred CCCCEEEEeCCChH----HHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHH
Confidence 99999999999998 4788889999999999874 56889988865 35689999997 99999998 6
Q ss_pred HHHHHHHHhCCCcEEEEeCccCcccccC-C-----CC-----C------cCcEEEEcccccccCCCCceEEEEEecChHH
Q psy12791 163 KAISAVVKQHPDILLVLDNTFLTAYYQK-S-----LP-----W------GVDIVLYSLTKYMNGHSDVVMGATVTNDDSL 225 (393)
Q Consensus 163 ~~l~~l~~~~~~~~livDea~~~~~~~~-~-----~~-----~------~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~ 225 (393)
++|.++|+++ +++||+||+|....+.. + +. . .+.++++||||.+ +++|+|+||++++++++
T Consensus 852 e~Llela~k~-di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf-~lpGLRIGylIap~~eL 929 (1082)
T PLN02672 852 EEILSVCAKY-GARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTEL-LSGGHEFGFLALNDSVL 929 (1082)
T ss_pred HHHHHHHHHc-CCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhh-ccHHHHheeEEeCCHHH
Confidence 6778888999 99999999998654421 1 10 0 1468999999999 69999999999976678
Q ss_pred HHHHHHHHHhcCCCC-CHHHHHHHHhcc--------CCHHHHHHHHHHHHHHHHHHHhhC
Q psy12791 226 QARLKFLQNSMGVVP-SPFDCWLVTRGL--------KTLPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 226 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
++.++.......... +...+..+.... +.+...++.+.++++.+.+.|+.+
T Consensus 930 i~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~ 989 (1082)
T PLN02672 930 IDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC 989 (1082)
T ss_pred HHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 888876543222211 111222222111 113334555677888888998875
No 145
>PLN02231 alanine transaminase
Probab=99.96 E-value=1.8e-27 Score=232.51 Aligned_cols=217 Identities=17% Similarity=0.168 Sum_probs=160.8
Q ss_pred CchHHHHHHHHHHHh----CC---CcEEEeccHHHH-H-HHHHHhc-CCCCeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 58 NPTRRNLERCIASLE----EA---KHGLCYSSGLGA-V-TAVTHLL-SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 58 ~~~~~~lr~~la~~~----~~---~~~i~~~~G~~a-l-~~~~~~~-~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
..+..+||+++|+++ |. ++.|++|+|+++ + .++..++ .+||.|+++.|+|+ .|...++..|.+++.
T Consensus 167 s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~----~y~~~~~~~g~~~v~ 242 (534)
T PLN02231 167 SQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYP----LYSASIALHGGTLVP 242 (534)
T ss_pred CCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCCh----hHHHHHHHcCCEEEE
Confidence 467889999999986 32 278999999886 7 5566666 47999999999998 477778889999999
Q ss_pred eCCC-------CHHHHHhhcCC------CCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCccccc--
Q psy12791 128 VDLR-------KIENLIKYIKP------NTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQ-- 189 (393)
Q Consensus 128 ~~~~-------d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~-- 189 (393)
++++ |++++++.+++ ++++++++|||||||.+++ +++|+++|+++ +++||+||+|....+.
T Consensus 243 ~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~-~l~lI~DEvY~~l~y~~~ 321 (534)
T PLN02231 243 YYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQE-GLVLLADEVYQENVYVPD 321 (534)
T ss_pred EecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEEccchhcccCCC
Confidence 8764 67888887754 6899999999999999998 67888899999 9999999999987652
Q ss_pred CCC-C---------C----cCcEEEEcccccccCCCCceEEEEEec--ChHHHHHHHHHHHhcCCCCCHHHHHHHHhccC
Q psy12791 190 KSL-P---------W----GVDIVLYSLTKYMNGHSDVVMGATVTN--DDSLQARLKFLQNSMGVVPSPFDCWLVTRGLK 253 (393)
Q Consensus 190 ~~~-~---------~----~~di~~~S~sK~~~G~~G~r~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (393)
.+. . . ...++++|+||.+.|.+|+|+||+++. ++++.+.+........ +.+...+.++...++
T Consensus 322 ~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~-~s~~~~Q~~~~~~l~ 400 (534)
T PLN02231 322 KKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASVNL-CSNISGQILASLVMS 400 (534)
T ss_pred CCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHhhhc-CCChHHHHHHHHHhC
Confidence 111 0 0 135889999997657999999999863 4788888866544322 223333333333221
Q ss_pred -------CHH-------HHHHHHHHHHHHHHHHHhhCCCcc
Q psy12791 254 -------TLP-------CRLKEHERGSIEVAKFLESHPCVK 280 (393)
Q Consensus 254 -------~~~-------~~~~~~~~~~~~l~~~l~~~~~~~ 280 (393)
.+. ..++.+.+++..+.+.|+.++++.
T Consensus 401 ~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~ 441 (534)
T PLN02231 401 PPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVT 441 (534)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 221 124556677788889998776654
No 146
>KOG0257|consensus
Probab=99.96 E-value=1.2e-28 Score=221.33 Aligned_cols=220 Identities=21% Similarity=0.282 Sum_probs=167.4
Q ss_pred CccccC-CCC-chHHHHHHHHHHHhCC----CcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccC
Q psy12791 50 GFEYSR-SNN-PTRRNLERCIASLEEA----KHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKI 121 (393)
Q Consensus 50 ~~~y~~-~~~-~~~~~lr~~la~~~~~----~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~ 121 (393)
.++|++ |+- +....|++++++++|. +++|++|+|+.+ + .+++.++++||+|++.+|.|.+ |....+..
T Consensus 62 ~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~----Y~~~~~ma 137 (420)
T KOG0257|consen 62 TNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDC----YIPQVVMA 137 (420)
T ss_pred hccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchh----hhhHHhhc
Confidence 455655 232 2344455555555553 368999999876 8 7999999999999999999995 67778889
Q ss_pred CcEEEeeCCC-------------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCc
Q psy12791 122 GLEVDFVDLR-------------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLT 185 (393)
Q Consensus 122 g~~v~~~~~~-------------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~ 185 (393)
|.+.+.++.. |.++++.++.++||+|++|+||||||.+.+ +++|+++|++| |.++|.||+|..
T Consensus 138 G~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~-~~lvisDevYe~ 216 (420)
T KOG0257|consen 138 GGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKH-GLLVISDEVYEW 216 (420)
T ss_pred CCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHC-CEEEEEhhHhHH
Confidence 9998888764 799999999999999999999999999998 66788999999 999999999997
Q ss_pred ccccCC---------CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh-cCCCCCHHHHHHHHh---cc
Q psy12791 186 AYYQKS---------LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS-MGVVPSPFDCWLVTR---GL 252 (393)
Q Consensus 186 ~~~~~~---------~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~ 252 (393)
..++.. -.+...+-++|++|++ |+.|+|+||++++ +.+...+...... .-.+.++.+.+.+.. .+
T Consensus 217 ~v~d~~~h~r~aslPgm~ertitvgS~gKtf-~~TGWrlGW~igp-~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~ 294 (420)
T KOG0257|consen 217 LVYDGNKHIRIASLPGMYERTITVGSFGKTF-GVTGWRLGWAIGP-KHLYSALFPVHQNFVFTCPTPIQEASAAAFALEL 294 (420)
T ss_pred HhhCCCcceeeecCCchhheEEEecccccee-eeeeeeeeeeech-HHhhhhHHHHhhccccccCcHHHHHHHHHHhhhh
Confidence 665432 1234679999999999 6999999999995 8888887765543 333444544332211 11
Q ss_pred --------CCHHHHHHHHHHHHHHHHHHHhhC
Q psy12791 253 --------KTLPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 253 --------~~~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
.........+.+++..+.+.|.++
T Consensus 295 ~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 295 ACLQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred hccCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 112235666778889999999876
No 147
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.96 E-value=1.3e-27 Score=225.70 Aligned_cols=315 Identities=17% Similarity=0.157 Sum_probs=215.1
Q ss_pred CCCCC-CCCCCCCccC--CeeeeCCCCCCCC-Ccccc----CCC-CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHH
Q psy12791 22 DQWRS-QCVIPPIILS--TTFKQNTPGQPPQ-GFEYS----RSN-NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVT 91 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~--~~~~~~~~~~~~~-~~~y~----~~~-~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~ 91 (393)
.+++| +++ +|++++ +.+.+...+.+.. ...++ .++ .+...+++++++++++.++.+++++|++++ .++.
T Consensus 16 ~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~l~ 94 (360)
T TIGR00858 16 RRLLNFSSN-DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEAALLFSSGYLANVGVIS 94 (360)
T ss_pred ceEEecccC-CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHH
Confidence 35677 666 677644 5555544332211 11111 122 256788999999999988999999998886 6666
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCC----CCcEEEEecCCCCcccccCHHHHHH
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKP----NTKMVWIENPTNPLMTVFDVKAISA 167 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~----~~~~v~l~~p~nptG~~~~~~~l~~ 167 (393)
.++++||+|++++|+|.. +...++..|++++.++..|++++++.+++ ++++|++++++|+||...++++|.+
T Consensus 95 ~~~~~gd~v~~~~~~~~~----~~~~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~ 170 (360)
T TIGR00858 95 ALVGKGDLILSDALNHAS----LIDGCRLSGARVRRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVA 170 (360)
T ss_pred HhCCCCCEEEEEccccHH----HHHHHHhcCCceEEecCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHH
Confidence 778999999999999985 45556778999998888888888888753 4788999999999999999999999
Q ss_pred HHHhCCCcEEEEeCccCcccccCC---------C-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh--
Q psy12791 168 VVKQHPDILLVLDNTFLTAYYQKS---------L-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS-- 235 (393)
Q Consensus 168 l~~~~~~~~livDea~~~~~~~~~---------~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~-- 235 (393)
+|+++ |+++|+||+|..+.+... . ..+++++++|+||++ |++| ||++++ +++.+.+......
T Consensus 171 l~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~g---G~~~~~-~~~~~~~~~~~~~~~ 244 (360)
T TIGR00858 171 LAERY-GAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKAL-GSYG---AYVAGS-QALIDYLINRARTLI 244 (360)
T ss_pred HHHHc-CcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhh-hccC---cEEEcC-HHHHHHHHHhCccce
Confidence 99999 999999999986543211 1 136789999999999 5654 899987 7887777543222
Q ss_pred cCCCCCHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc
Q psy12791 236 MGVVPSPFDCWLVTRGL---KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN 312 (393)
Q Consensus 236 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
.+...++.....+...+ +.....+++..++.+.+.+.|++++ +. +. + ..+.++++.++
T Consensus 245 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~-~~-~----------------~~~~~~~~~~~ 305 (360)
T TIGR00858 245 FSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG-FT-LM-P----------------SCTPIVPVIIG 305 (360)
T ss_pred ecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC-Cc-cC-C----------------CCCCEEEEEeC
Confidence 12233444333222222 2233456667777888888887643 21 11 1 12568888884
Q ss_pred CCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 313 GGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 313 ~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
.......+.+.+...++.+..+..... + ..++++|+|++..+++++++.+.++|
T Consensus 306 -~~~~~~~~~~~l~~~gI~v~~~~~~~~---~-----------------~~~~~iRis~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 306 -DNASALALAEELQQQGIFVGAIRPPTV---P-----------------AGTSRLRLTLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred -CHHHHHHHHHHHHHCCeeEeeeCCCCC---C-----------------CCCceEEEEEcCCCCHHHHHHHHHhh
Confidence 434455666666555555544322100 0 01468999999999998888887776
No 148
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.96 E-value=4.9e-27 Score=225.13 Aligned_cols=298 Identities=18% Similarity=0.198 Sum_probs=207.1
Q ss_pred hHHHHHHHHHHHhCCC--cEEEeccHHHH-H-HHHHHh----cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 60 TRRNLERCIASLEEAK--HGLCYSSGLGA-V-TAVTHL----LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~--~~i~~~~G~~a-l-~~~~~~----~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
..+++|+.+|+++|.+ +++++++|+++ + .++.++ +++||+|++++++|++++..+...++..|++++.++.+
T Consensus 63 ~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~ 142 (403)
T TIGR01979 63 AYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD 142 (403)
T ss_pred HHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC
Confidence 4668999999999986 57888888776 6 444443 57899999999999987777777788899999998764
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEcccc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTK 205 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK 205 (393)
|++++++.+.+++++|++++|+||||.++|+++|.++|+++ |+++++|++|+.+.....+ ..++|+++.|+||
T Consensus 143 ~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~-~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K 221 (403)
T TIGR01979 143 DDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQV-GAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHK 221 (403)
T ss_pred CCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHc-CCEEEEEchhhcCccccCccccCCCEEEEeccc
Confidence 78999999998999999999999999999999999999999 9999999999876543222 2578999999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHH---------------------hcCCCCCHHHHHHHHhccC-----CHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQN---------------------SMGVVPSPFDCWLVTRGLK-----TLPCRL 259 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~-----~~~~~~ 259 (393)
++ |++| +|+++.+ +++.+.++.... ...+..+......+...++ ......
T Consensus 222 ~~-gp~G--~g~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~ 297 (403)
T TIGR01979 222 MY-GPTG--IGVLYGK-EELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIE 297 (403)
T ss_pred cc-CCCC--ceEEEEc-hHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHH
Confidence 88 7888 9999987 676665531110 0001122222222222222 123344
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccc
Q psy12791 260 KEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIES 339 (393)
Q Consensus 260 ~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s 339 (393)
++..+..+.+.+.|+.+++++ +..|.-+ ...++++.|.+++ .....+.+.|...++.++.|..++
T Consensus 298 ~~~~~l~~~l~~~l~~~~g~~-~~~~~~~------------~~~~~~v~~~~~~--~~~~~~~~~L~~~gI~v~~g~~~~ 362 (403)
T TIGR01979 298 AHEHELTAYALERLGEIPGLR-IYGPRDA------------EDRGGIISFNVEG--VHPHDVGTILDEEGIAVRSGHHCA 362 (403)
T ss_pred HHHHHHHHHHHHHHhcCCCEE-EeCCCCc------------cccCceEEEEeCC--cCHHHHHHHHhhCCEEEcchhhhh
Confidence 555556666777777666654 3222200 0125788888853 123345556666566666655432
Q ss_pred cccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 340 LADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
. +. ....| .++++|+|++.++++++++.+.++|+++.+
T Consensus 363 ~---~~-----------~~~~~-~~~~iRiS~~~~~t~~di~~l~~~l~~~~~ 400 (403)
T TIGR01979 363 Q---PL-----------MRRFG-VPATCRASFYIYNTEEDIDALVEALKKVRK 400 (403)
T ss_pred H---HH-----------HHHhC-CCCEEEEEeccCCCHHHHHHHHHHHHHHHH
Confidence 1 00 00112 157999999999999999999999987653
No 149
>PLN02368 alanine transaminase
Probab=99.96 E-value=3.1e-27 Score=224.24 Aligned_cols=220 Identities=13% Similarity=0.111 Sum_probs=164.0
Q ss_pred CCCC-chHHHHHHHHHHHh----CC---CcEEEeccHHHH-H-HHHHHhc-CCCCeEEEcCCCccchHHHHHHhcccCCc
Q psy12791 55 RSNN-PTRRNLERCIASLE----EA---KHGLCYSSGLGA-V-TAVTHLL-SAGDHIISGDDVYGGTYRYFAQVAPKIGL 123 (393)
Q Consensus 55 ~~~~-~~~~~lr~~la~~~----~~---~~~i~~~~G~~a-l-~~~~~~~-~~gd~vl~~~~~y~~~~~~~~~~~~~~g~ 123 (393)
.|++ .+..+||+++|+++ |. +++|++|+|+++ + .++.+++ ++||.|++++|+|+. |...++..|.
T Consensus 102 ~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~----y~~~~~~~g~ 177 (407)
T PLN02368 102 AYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPL----YSATISLLGG 177 (407)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCcc----HHHHHHHcCC
Confidence 3443 46689999999987 53 268999999886 6 6666776 699999999999995 7777888999
Q ss_pred EEEeeCCC-------CHHHHHhhcCC------CCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCccc
Q psy12791 124 EVDFVDLR-------KIENLIKYIKP------NTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAY 187 (393)
Q Consensus 124 ~v~~~~~~-------d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~ 187 (393)
+++.++++ |++++++.+++ +++++++++||||||.+++ +++|.++|+++ +++||+||+|..+.
T Consensus 178 ~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~-~~~II~DE~Y~~l~ 256 (407)
T PLN02368 178 TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQE-RLVLLGDEVYQQNI 256 (407)
T ss_pred EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEccccccc
Confidence 99998763 67889888763 6899999999999999998 66777888999 99999999999876
Q ss_pred ccC--CC-C--------------CcCcEEEEcccccccCCCCceEEEEEe--cChHHHHHHHHHHHhcCCCCCHHHHHHH
Q psy12791 188 YQK--SL-P--------------WGVDIVLYSLTKYMNGHSDVVMGATVT--NDDSLQARLKFLQNSMGVVPSPFDCWLV 248 (393)
Q Consensus 188 ~~~--~~-~--------------~~~di~~~S~sK~~~G~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (393)
+.. +. . .+..++++||||.++|++|+|+||+++ .++++++.+...... ..+.+...+.++
T Consensus 257 y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~-~~~~~~~~Q~aa 335 (407)
T PLN02368 257 YQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASI-ALSPNVSGQIFM 335 (407)
T ss_pred cCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcc-cCCCCcHHHHHH
Confidence 422 11 1 125699999999985599999999995 237888888776432 223444444444
Q ss_pred HhccCC-----------H---HHHHHHHHHHHHHHHHHHhhCCCcc
Q psy12791 249 TRGLKT-----------L---PCRLKEHERGSIEVAKFLESHPCVK 280 (393)
Q Consensus 249 ~~~~~~-----------~---~~~~~~~~~~~~~l~~~l~~~~~~~ 280 (393)
...+.. . ...++.+.+++..+.+.|++++++.
T Consensus 336 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~ 381 (407)
T PLN02368 336 GLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVV 381 (407)
T ss_pred HHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 443321 1 1234556677778888998877654
No 150
>PLN02721 threonine aldolase
Probab=99.96 E-value=3.2e-27 Score=222.52 Aligned_cols=311 Identities=15% Similarity=0.139 Sum_probs=211.5
Q ss_pred CCC-CCCCCCCccCCeeeeCCCCC-CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcC-CCCe
Q psy12791 24 WRS-QCVIPPIILSTTFKQNTPGQ-PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLS-AGDH 99 (393)
Q Consensus 24 ~~~-~~~~~p~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~-~gd~ 99 (393)
.++ ++|.+|. |++.+.+++... ... ...+++|...+||+++|++++.+..+++++|++++ .++..++. +||+
T Consensus 7 ~~~~~~~~~~~-~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~~gd~ 82 (353)
T PLN02721 7 VVDLRSDTVTK-PTDAMRAAMANAEVDD---DVLGYDPTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDVRGSE 82 (353)
T ss_pred hhhhhcccccC-CCHHHHHHHHhccCCC---cccCCCHHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccCCCCe
Confidence 446 7888886 666666665432 111 11234577899999999999998889999999885 66666676 9999
Q ss_pred EEEcCCCccchHHHHHH--hcccCCcEEEeeCCC-----CHHHHHhhcC-------CCCcEEEEec-CCCCcccccC---
Q psy12791 100 IISGDDVYGGTYRYFAQ--VAPKIGLEVDFVDLR-----KIENLIKYIK-------PNTKMVWIEN-PTNPLMTVFD--- 161 (393)
Q Consensus 100 vl~~~~~y~~~~~~~~~--~~~~~g~~v~~~~~~-----d~~~l~~~l~-------~~~~~v~l~~-p~nptG~~~~--- 161 (393)
|++++|+|.+. +.. .+...|++++.++.+ |++++++.++ +++++|++++ +|||||.++|
T Consensus 83 Vl~~~~~~~~~---~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~ 159 (353)
T PLN02721 83 VILGDNSHIHL---YENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEY 159 (353)
T ss_pred EEEcCccceeh---hcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHH
Confidence 99999998652 332 456789999988764 7899999887 5789999977 5789999988
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccc---cCC---CCCcCcEEEEcccccccCCCCceEEE-EEecChHHHHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYY---QKS---LPWGVDIVLYSLTKYMNGHSDVVMGA-TVTNDDSLQARLKFLQN 234 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~---~~~---~~~~~di~~~S~sK~~~G~~G~r~G~-~~~~~~~~~~~~~~~~~ 234 (393)
+++|.++|+++ |+++++|++|..+.. ..+ ...+.|.++.|+||++++ + +|+ ++.+ +++++.+.....
T Consensus 160 l~~l~~l~~~~-g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~-~---~G~~~~~~-~~~~~~~~~~~~ 233 (353)
T PLN02721 160 TDKVGELAKRH-GLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGA-P---VGSVIVGS-KSFIRKAKRLRK 233 (353)
T ss_pred HHHHHHHHHHc-CCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCC-c---eeeEEecC-HHHHHhHHHHHH
Confidence 67999999999 999999999864321 111 112578888899999953 2 555 5554 888888776655
Q ss_pred hcCCCCCH--HHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcce-EeCCCCCCCcchHHHhhhcCCCcceEEEEE
Q psy12791 235 SMGVVPSP--FDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKG-VLHPGLPSHPNHELAKSQWSGTSGMLSFYV 311 (393)
Q Consensus 235 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
..+..... ..+......++....++++..++.+.+.+.|+.++++.. +..+ .++++++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-----------------~~~~~~~~~ 296 (353)
T PLN02721 234 TLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAV-----------------ETNIVYFDI 296 (353)
T ss_pred hcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCc-----------------cceEEEEEc
Confidence 44433222 222222333333333445555667788888887665431 1111 146788887
Q ss_pred cCC-HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 312 NGG-AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 312 ~~~-~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+.. ......+.+.|...++.+..+ .+++||+++++..++++++.+.++|+++
T Consensus 297 ~~~~~~~~~~~~~~L~~~gi~v~~~---------------------------~~~~lR~~~~~~~~~~~i~~~~~~l~~~ 349 (353)
T PLN02721 297 TDGSRITAEKLCKSLEEHGVLLMPG---------------------------NSSRIRVVTHHQISDSDVQYTLSCFQQA 349 (353)
T ss_pred cCCccccHHHHHHHHHhCCcEEecC---------------------------CCceEEEEecCcCCHHHHHHHHHHHHHH
Confidence 421 123455666665444444332 1468999999999999999999999875
Q ss_pred h
Q psy12791 391 C 391 (393)
Q Consensus 391 ~ 391 (393)
.
T Consensus 350 ~ 350 (353)
T PLN02721 350 A 350 (353)
T ss_pred h
Confidence 4
No 151
>KOG0259|consensus
Probab=99.96 E-value=1.5e-26 Score=204.23 Aligned_cols=223 Identities=19% Similarity=0.234 Sum_probs=167.9
Q ss_pred CCchHHHHHHHHHHHhCC-------CcEEEeccHH-HHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 57 NNPTRRNLERCIASLEEA-------KHGLCYSSGL-GAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~-------~~~i~~~~G~-~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
|..+....|+++|++++. .+.+++|+|. +|| .++.++.+||..|++|.|+|+ .|...+.-.|++++.
T Consensus 101 ps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp----~Y~~~a~~~~lEVR~ 176 (447)
T KOG0259|consen 101 PSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFP----LYDTRAIYSGLEVRY 176 (447)
T ss_pred CccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCc----hHHHhhhhcCceeEe
Confidence 567888999999999542 2577788885 569 889999999999999999998 688888899999999
Q ss_pred eCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCccccc-CC---CC
Q psy12791 128 VDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQ-KS---LP 193 (393)
Q Consensus 128 ~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~-~~---~~ 193 (393)
+++- |++.+++.++++|.++++.||+||.|.+++ +++|++.|+++ ++++|.||+|...++. .+ +.
T Consensus 177 ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~kl-gi~vIaDEVY~~~vfg~~pfvpmg 255 (447)
T KOG0259|consen 177 YDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKL-GIMVIADEVYGHTVFGDKPFVPMG 255 (447)
T ss_pred ecccCcccceechHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHh-CCeEEehhhcceeecCCCCccchh
Confidence 8873 899999999999999999999999999998 88999999999 9999999999986653 22 21
Q ss_pred ----CcCcEEEEcccccccCCCCceEEEEEecChH-------HHHHHHHHHHhcCCCCCHHHHHHHHhccCC-----HHH
Q psy12791 194 ----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDS-------LQARLKFLQNSMGVVPSPFDCWLVTRGLKT-----LPC 257 (393)
Q Consensus 194 ----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 257 (393)
.-..+.+++.||.+- .||+|+||++..++. +.+.+......... +...-+.++-..+++ +..
T Consensus 256 ~fssiVPVitlggisKrW~-VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~-p~TiiQ~AlP~IL~kTp~efF~k 333 (447)
T KOG0259|consen 256 KFSSIVPVITLGGISKRWI-VPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPG-PATIIQGALPDILEKTPEEFFDK 333 (447)
T ss_pred hccccCceEeecccccccc-cCCceeeeEEEecccccccchHHHHHHHHHHhccCC-ccHhHHHHhHHHHHhChHHHHHH
Confidence 124689999999885 999999999987542 22333333222222 222233333233322 333
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEeCCC
Q psy12791 258 RLKEHERGSIEVAKFLESHPCVKGVLHPG 286 (393)
Q Consensus 258 ~~~~~~~~~~~l~~~l~~~~~~~~v~~~~ 286 (393)
+...+..++..-.+.|+.+|.+.+...|.
T Consensus 334 ~~~~lk~na~l~y~~Lk~IP~l~cp~kPe 362 (447)
T KOG0259|consen 334 KLSFLKSNADLCYSRLKDIPCLTCPVKPE 362 (447)
T ss_pred HHHHHHhhHHHHHHHHhcCCCcccCcCCC
Confidence 45555677778889999888876544444
No 152
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.96 E-value=1.2e-26 Score=223.07 Aligned_cols=258 Identities=16% Similarity=0.188 Sum_probs=168.5
Q ss_pred CCCC-chHHHHHHHHHHHh----C--CC-cEEEeccHHHH-H-HHHHHhcC-----CCCeEEE-cCCCccchHHHHHHhc
Q psy12791 55 RSNN-PTRRNLERCIASLE----E--AK-HGLCYSSGLGA-V-TAVTHLLS-----AGDHIIS-GDDVYGGTYRYFAQVA 118 (393)
Q Consensus 55 ~~~~-~~~~~lr~~la~~~----~--~~-~~i~~~~G~~a-l-~~~~~~~~-----~gd~vl~-~~~~y~~~~~~~~~~~ 118 (393)
.|++ .+..+||++||+++ | ++ ++|++|+|+++ + .++..+++ +||.|++ .+|+|+. |...+
T Consensus 69 ~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~----y~~~~ 144 (416)
T PRK09440 69 NYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIG----YADAG 144 (416)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchh----hHHHh
Confidence 3444 45789999999987 3 33 78999999887 6 55556664 5899999 6999985 44432
Q ss_pred c------cCCcEEEeeCC------CCHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCcc
Q psy12791 119 P------KIGLEVDFVDL------RKIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTF 183 (393)
Q Consensus 119 ~------~~g~~v~~~~~------~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~ 183 (393)
. ..+..+..++. .|+++++ +.++++++++++||||||.+++ +++|.++|+++ +++||+||+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~-~~~iI~De~Y 221 (416)
T PRK09440 145 LEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQH-NIPLLIDNAY 221 (416)
T ss_pred hccCceeecccccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHc-CCcEEEeCCc
Confidence 2 22223333322 1566665 3557899999999999999999 67788888999 9999999999
Q ss_pred CcccccC------CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC--H
Q psy12791 184 LTAYYQK------SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT--L 255 (393)
Q Consensus 184 ~~~~~~~------~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 255 (393)
..+.... +...++.++++||||. ++||+|+||++++ +++++.+...........+...+.++...++. +
T Consensus 222 ~~~~~~~~~~~~~~~~~~~vI~~~SfSK~--~~pGlRiG~~i~~-~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 298 (416)
T PRK09440 222 GPPFPGIIFSEATPLWNPNIILCMSLSKL--GLPGVRCGIVIAD-EEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDL 298 (416)
T ss_pred cccCCCcchhhcCccccCCeEEEeccccc--CCCcceEEEEeCC-HHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchH
Confidence 8532211 1113467999999994 5999999999997 88889888777665555566666555555542 2
Q ss_pred HH-----HHHHHHHHHHHHHHHHhhC-CCcc-eEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc
Q psy12791 256 PC-----RLKEHERGSIEVAKFLESH-PCVK-GVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF 328 (393)
Q Consensus 256 ~~-----~~~~~~~~~~~l~~~l~~~-~~~~-~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (393)
.. .+..+.++...+.+.|... +.+. .+..|. .+.++|+.++........+.+.+...
T Consensus 299 ~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p~----------------gg~fiw~~~~~~~~~~~~~~~~l~~~ 362 (416)
T PRK09440 299 LRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKPE----------------GAIFLWLWFKDLPITTEELYQRLKAR 362 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecCC----------------CceEEEEECCCCCCCHHHHHHHHHHC
Confidence 11 1233345556666777643 2221 122222 24678998853111234455555555
Q ss_pred ccccccCCcc
Q psy12791 329 RCAESLGGIE 338 (393)
Q Consensus 329 ~~~~~~g~~~ 338 (393)
++.+.+|..+
T Consensus 363 gV~v~pg~~F 372 (416)
T PRK09440 363 GVLVVPGHYF 372 (416)
T ss_pred CEEEechHhh
Confidence 6667666554
No 153
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=3.4e-27 Score=224.24 Aligned_cols=299 Identities=20% Similarity=0.226 Sum_probs=203.4
Q ss_pred chHHHHHHHHHHHhCCC--cEEEeccHHH-HH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 59 PTRRNLERCIASLEEAK--HGLCYSSGLG-AV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~--~~i~~~~G~~-al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
+...++|+.+++++|.+ +.|++++|++ ++ .++.+++++||+|+++.++|+++...+...++..|.+++.++.+
T Consensus 44 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 123 (376)
T TIGR01977 44 REVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEG 123 (376)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCC
Confidence 56778999999999976 3677776655 57 66777889999999999999887666666777789999988764
Q ss_pred --CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEccccccc
Q psy12791 132 --KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTKYMN 208 (393)
Q Consensus 132 --d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK~~~ 208 (393)
|++++++.+++++++|++++|+||||.++|+++|.++|+++ |+++|+|++++.+.....+ ..++|+++.|++||++
T Consensus 124 ~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~-~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~ 202 (376)
T TIGR01977 124 LISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQEN-GIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLL 202 (376)
T ss_pred CcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHc-CCEEEEEhhhccCccCCCchhcCCCEEEeccccccc
Confidence 78999999988899999999999999999999999999999 9999999999876543222 2579999999999998
Q ss_pred CCCCceEEEEEecChHHHHHHHHH--H--------------HhcCCCCCHHHHHHHHhccC-----CHHHHHHHHHHHHH
Q psy12791 209 GHSDVVMGATVTNDDSLQARLKFL--Q--------------NSMGVVPSPFDCWLVTRGLK-----TLPCRLKEHERGSI 267 (393)
Q Consensus 209 G~~G~r~G~~~~~~~~~~~~~~~~--~--------------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 267 (393)
|++| .|+++.++...+..+... . ....+..+......+...++ ..+..+++..+..+
T Consensus 203 ~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~ 280 (376)
T TIGR01977 203 GPQG--TGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTE 280 (376)
T ss_pred CCCC--ceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 7888 676666534321111100 0 00001111111111222222 22334555666777
Q ss_pred HHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc-ccccccCCccccccCccc
Q psy12791 268 EVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF-RCAESLGGIESLADLPAE 346 (393)
Q Consensus 268 ~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~g~~~s~~~~~~~ 346 (393)
.+.+.|++.+++. +..+.-+ ....++++|.+++ ...+.+.+.|... ++.++.|..++....
T Consensus 281 ~~~~~l~~~~~~~-~~~~~~~------------~~~~~~v~~~~~~--~~~~~~~~~L~~~~gi~v~~g~~~~~~~~--- 342 (376)
T TIGR01977 281 KLLNGLREINKVK-IYGPADP------------ANRVGVVSFTVEG--IDSEEVADILDEKFDIATRTGLHCAPLAH--- 342 (376)
T ss_pred HHHHHHhcCCCeE-EeCCCCc------------cccCCeEEEEECC--CCHHHHHHHHhccCCEEEEcccccchHHH---
Confidence 7788887766653 2222100 1124688888853 1234455555443 566655544332211
Q ss_pred ccCCCCChhhHhhcC-CCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 347 MTHKSIPKETRDALG-ITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 347 ~~~~~~~~~~~~~~g-~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
..+| ...+.||+|++..+++++++.+.++|++
T Consensus 343 -----------~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 343 -----------KTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred -----------HHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 1112 2367999999999999999999999875
No 154
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.96 E-value=2.4e-26 Score=219.63 Aligned_cols=285 Identities=14% Similarity=0.100 Sum_probs=196.8
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENL 136 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l 136 (393)
.+...+||+++|+++|.++.+++++|++++ .++.+++++||+|++++++|++. ...++..+.+...++..|++++
T Consensus 82 ~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~----~~~~~~~~~~~~~~~~~d~~~l 157 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGAEDAIISDALNHASI----IDGVRLCKAKRYRYANNDMADL 157 (393)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEECchHHHHHHHHHHhCCCCCEEEEeccccHHH----HHHHHhcCCceEEeCCCCHHHH
Confidence 345689999999999999999999998887 66677889999999999999863 3334555555555666688888
Q ss_pred HhhcCC------CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC---------CCCCcCcEEEE
Q psy12791 137 IKYIKP------NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK---------SLPWGVDIVLY 201 (393)
Q Consensus 137 ~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~---------~~~~~~di~~~ 201 (393)
++.+.+ ++++|++++++||||.+.|+++|.++|+++ |+++|+||+|+.+.... ....+.|++++
T Consensus 158 ~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~-~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~ 236 (393)
T TIGR01822 158 EAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKY-DALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITG 236 (393)
T ss_pred HHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHc-CCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEE
Confidence 887764 688999999999999999999999999999 99999999997543211 11125789999
Q ss_pred cccccccCCCCceEEEEEecChHHHHHHHHHHH--hcCCCCCHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHhhC
Q psy12791 202 SLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN--SMGVVPSPFDCWLVTRGL---KTLPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 202 S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
|+||+++| .|+||++++ +++.+.++.... .+++...+.....+...+ +..+..+++..++.+.+.+.|+..
T Consensus 237 s~sK~l~g---~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (393)
T TIGR01822 237 TLGKALGG---ASGGFTTAR-KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA 312 (393)
T ss_pred EChHHhhC---CCcEEEEeC-HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 99999843 479999987 888887765322 122333333322222222 223345566667777777777653
Q ss_pred CCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhh
Q psy12791 277 PCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKET 356 (393)
Q Consensus 277 ~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~ 356 (393)
++. +. +. .+.++.+.+. +......+.+.|...++.+. +..+...
T Consensus 313 -g~~-~~-~~----------------~~~~~~i~~~-~~~~~~~l~~~L~~~gI~v~-~~~~~~~--------------- 356 (393)
T TIGR01822 313 -GFD-IK-PA----------------DHPIIPVMLY-DAVLAQRFARRLLEEGIYVT-GFFYPVV--------------- 356 (393)
T ss_pred -CCC-CC-CC----------------CCCEEEEEeC-CHHHHHHHHHHHHHCCeeEe-eeCCCCC---------------
Confidence 221 11 10 1346666663 43455667666654455443 2211100
Q ss_pred HhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 357 RDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 357 ~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
......+|+|++..+++++++.+.++|+++.
T Consensus 357 ----~~~~~~iRis~~~~~t~edi~~~~~~l~~~~ 387 (393)
T TIGR01822 357 ----PKGQARIRVQISAAHTEEQLDRAVEAFTRIG 387 (393)
T ss_pred ----CCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 0013579999999999999999999998764
No 155
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.95 E-value=3.5e-26 Score=218.76 Aligned_cols=214 Identities=14% Similarity=0.121 Sum_probs=150.1
Q ss_pred CCchHHHHHHHHHHHhC-------CCcEEE--eccHHH-HH-HHH---HHhcCCCCeEEEcCCCccchHHHHHHhcccCC
Q psy12791 57 NNPTRRNLERCIASLEE-------AKHGLC--YSSGLG-AV-TAV---THLLSAGDHIISGDDVYGGTYRYFAQVAPKIG 122 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~-------~~~~i~--~~~G~~-al-~~~---~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g 122 (393)
+..+..+||+++|+++. .++.|+ .+.|++ ++ .++ ..++++||+|++++|+|+. |...++..|
T Consensus 70 ~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~----~~~~~~~~G 145 (404)
T PTZ00376 70 PIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPN----HVNIFKSAG 145 (404)
T ss_pred CCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchh----HHHHHHHcC
Confidence 35688899999999752 124666 355654 45 332 3567999999999999984 788889999
Q ss_pred cEEEeeCC---C----CHHHHHhhcC---CCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCccccc
Q psy12791 123 LEVDFVDL---R----KIENLIKYIK---PNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQ 189 (393)
Q Consensus 123 ~~v~~~~~---~----d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~ 189 (393)
++++.+++ + |++.+++.+. ++++++++++||||||.+++ +++|.++|++| +++||+||+|..+.+.
T Consensus 146 ~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~~~~~ 224 (404)
T PTZ00376 146 LNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRK-NLIPFFDMAYQGFASG 224 (404)
T ss_pred CceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEehhhcCccCC
Confidence 99999987 2 6788888774 34677778999999999998 66778889999 9999999999876653
Q ss_pred C------CC-----CCcCcEEEEcccccccCCCCceEEEEE--ecChHHHHHH----HHHHHhcCCCCCHHHHHHHHhcc
Q psy12791 190 K------SL-----PWGVDIVLYSLTKYMNGHSDVVMGATV--TNDDSLQARL----KFLQNSMGVVPSPFDCWLVTRGL 252 (393)
Q Consensus 190 ~------~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 252 (393)
. +. ...+.++++||||.+ |++|+|+||++ ..++++.+.+ .........+.+...+..+...+
T Consensus 225 ~~~~~~~~~~~~~~~~~~vi~i~SfSK~~-~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l 303 (404)
T PTZ00376 225 DLDKDAYAIRLFAERGVEFLVAQSFSKNM-GLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRIL 303 (404)
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEeCCCcc-cccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHh
Confidence 1 01 112569999999999 69999999983 2337655544 22222223334445555555444
Q ss_pred CCH----------HHHHHHHHHHHHHHHHHHhhC
Q psy12791 253 KTL----------PCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 253 ~~~----------~~~~~~~~~~~~~l~~~l~~~ 276 (393)
+.- ...++++.+++..+.+.|+++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 337 (404)
T PTZ00376 304 SDPELRAEWLSELKEMSGRIQNMRQLLYDELKAL 337 (404)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 431 122344556677777777754
No 156
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.95 E-value=1.4e-26 Score=216.76 Aligned_cols=307 Identities=20% Similarity=0.108 Sum_probs=208.3
Q ss_pred CCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCC
Q psy12791 28 CVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDV 106 (393)
Q Consensus 28 ~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~ 106 (393)
+.+||+++++.+.+++.+.......| ++++...++++.+++++|.++.+++++|++++ .++..++++||.|++++++
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~ 80 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVGDDVY--GEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQPGGSVICHETA 80 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccCCccc--CCCHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCCCCeEEEecCc
Confidence 57899999998888775532211122 35678999999999999955788888888777 7777788999999999999
Q ss_pred ccchHHHHHHhcccCCcEEEeeCCC----CHHHHHhhcCC-------CCcEEEEecCCCCcccccC---HHHHHHHHHhC
Q psy12791 107 YGGTYRYFAQVAPKIGLEVDFVDLR----KIENLIKYIKP-------NTKMVWIENPTNPLMTVFD---VKAISAVVKQH 172 (393)
Q Consensus 107 y~~~~~~~~~~~~~~g~~v~~~~~~----d~~~l~~~l~~-------~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~ 172 (393)
|.+.+.. ...++..|++++.++.+ |++++++++.+ ++++|++++|||| |.+++ +++|.++|+++
T Consensus 81 ~~~~~~~-~~~~~~~g~~~~~v~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~ 158 (338)
T cd06502 81 HIYTDEA-GAPEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKEN 158 (338)
T ss_pred ceeeecC-CcHHHHcCceEEeecCCCCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHc
Confidence 8753211 01234579999998874 78999998864 6899999999998 55545 67789999999
Q ss_pred CCcEEEEeCccCcccc---cCC---CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCC--CCHHH
Q psy12791 173 PDILLVLDNTFLTAYY---QKS---LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVV--PSPFD 244 (393)
Q Consensus 173 ~~~~livDea~~~~~~---~~~---~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 244 (393)
|+++++||+|..+.. ..+ ...+.|+++.|+||++ |.+| +++++.+ +++++.++.....++.. .++..
T Consensus 159 -~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~-~~~~--g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd06502 159 -GLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGG-GAPV--GAVVVGN-RDFIARARRRRKQAGGGMRQSGFL 233 (338)
T ss_pred -CCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccC-CCcc--ceEEECC-HHHHHHHHHHHHHhCCChhhHHHH
Confidence 999999999854321 111 1135789999999999 5776 4445555 88888887665444322 23444
Q ss_pred HHHHHhccCC--HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHH
Q psy12791 245 CWLVTRGLKT--LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFL 322 (393)
Q Consensus 245 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
+..+...++. ...+.++..++.+++.+.|+.++. . + .+ ...+++.+.+++.......+.
T Consensus 234 ~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~-~-~-~~----------------~~~~~~~v~~~~~~~~~~~l~ 294 (338)
T cd06502 234 AAAGLAALENDLWLRRLRHDHEMARRLAEALEELGG-L-E-SE----------------VQTNIVLLDPVEANAVFVELS 294 (338)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCC-C-c-cc----------------ccCCeEEEecCCccHHHHHHH
Confidence 4444444443 444566777777888888876543 1 1 11 124666666643334444555
Q ss_pred HhcC---ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 323 ESLL---IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 323 ~~l~---~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
+.+. ..++.+.. ...++||++++..+++++++.+.+++++
T Consensus 295 ~~l~~~~~~gi~~~~---------------------------~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 295 KEAIERRGEGVLFYA---------------------------WGEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHhhhCCEEEEe---------------------------cCCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 4432 11211110 0137899999999999999998888764
No 157
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=1.4e-26 Score=220.26 Aligned_cols=304 Identities=17% Similarity=0.162 Sum_probs=201.4
Q ss_pred chHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhc----CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 59 PTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLL----SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~----~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
...+++|+.+|+++|.+ ++|++++|+++ + .++..++ ++||.|+++..+|++... +...++..|++++.++.+
T Consensus 43 ~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~-~~~~~~~~g~~v~~v~~~ 121 (381)
T PRK02948 43 SLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHS-YFQSLESQGYTVTEIPVD 121 (381)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHH-HHHHHHhCCCEEEEEeeC
Confidence 34678999999999975 78888888665 5 4554543 578999999988876443 344567789999988864
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC-CCCcCcEEEEcccc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS-LPWGVDIVLYSLTK 205 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~-~~~~~di~~~S~sK 205 (393)
|++++++.+.+++++|++++|+||||.++|+++|.++|+++ |+++++|+++..+..... ...++|+++.|+||
T Consensus 122 ~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~-~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K 200 (381)
T PRK02948 122 KSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKY-NVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHK 200 (381)
T ss_pred CCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHc-CCEEEEEChhhccccccCcccCCCCEEEecHHh
Confidence 78999999988899999999999999999999999999999 999999998876543222 23578999999999
Q ss_pred cccCCCCceEEEEEecChHH-HHHHHH----HHHhcCCCCCHHHHHHHHhcc----CCHHHHHHHHHHHHHHHHHHHhhC
Q psy12791 206 YMNGHSDVVMGATVTNDDSL-QARLKF----LQNSMGVVPSPFDCWLVTRGL----KTLPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
++ |++| +|+++.+ +++ +..+.. ......+..+......+...+ +.....+++..+.+..+.+.|+++
T Consensus 201 ~~-gp~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 276 (381)
T PRK02948 201 IY-GPKG--VGAVYIN-PQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL 276 (381)
T ss_pred cC-CCCc--EEEEEEc-CCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 98 7999 8999887 433 111110 000111222222222222222 334445566667777777878765
Q ss_pred CCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhh
Q psy12791 277 PCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKET 356 (393)
Q Consensus 277 ~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~ 356 (393)
+. . +...+-.+ .....++.|.+++ . ..+.+...|...++.++.|..|+..-.+ +...
T Consensus 277 ~~-~-v~~~~~~~-----------~~~~~i~~~~~~~-~-~~~~~~~~l~~~gI~v~~g~~c~~~~~~--------p~~~ 333 (381)
T PRK02948 277 PL-P-IEVEGHST-----------SCLPHIIGVTIKG-I-EGQYTMLECNRRGIAISTGSACQVGKQE--------PSKT 333 (381)
T ss_pred CC-C-EEEeCCCc-----------cCcCCEEEEEeCC-C-CHHHHHHhcccCCEEEEchHhcCCCCCC--------CCHH
Confidence 31 1 11111000 1123567777753 1 1244445566667777776654321111 1122
Q ss_pred HhhcCC----CCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 357 RDALGI----TDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 357 ~~~~g~----~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..++|. ..++||+|++.++++++++.+.++|+++.
T Consensus 334 ~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~ 372 (381)
T PRK02948 334 MLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIG 372 (381)
T ss_pred HHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 222332 14799999999999999999999998764
No 158
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.95 E-value=1.9e-26 Score=221.23 Aligned_cols=315 Identities=16% Similarity=0.112 Sum_probs=209.9
Q ss_pred CCCCCCCccCCeeeeCCCCCCCCC-----ccccCCCC-chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhc--CCC
Q psy12791 27 QCVIPPIILSTTFKQNTPGQPPQG-----FEYSRSNN-PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLL--SAG 97 (393)
Q Consensus 27 ~~~~~p~~~~~~~~~~~~~~~~~~-----~~y~~~~~-~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~--~~g 97 (393)
|-+-+|+.+++.+.++..+.+... .....|+. +...+|+++||+++|.+++++++||++++ .++..+. .+|
T Consensus 53 sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~~l~~~~~g 132 (410)
T PRK13392 53 SNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSNDAALSTLGKLLPG 132 (410)
T ss_pred CCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHHHhcCCCC
Confidence 556788888888776654432110 01112333 35789999999999988999999999886 5555443 478
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcC----CCCcEEEEecCCCCcccccCHHHHHHHHHhCC
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIK----PNTKMVWIENPTNPLMTVFDVKAISAVVKQHP 173 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 173 (393)
|.|+++...|.+. ...++..|.++..++.+|.+++++.+. +++++|++++|+||||.+.|+++|.++|+++
T Consensus 133 ~~vi~~~~~h~s~----~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~- 207 (410)
T PRK13392 133 CVILSDALNHASM----IEGIRRSGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRY- 207 (410)
T ss_pred CEEEEehhhhHHH----HHHHHHcCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHc-
Confidence 9888877677653 234567788888887766666665553 4689999999999999999999999999999
Q ss_pred CcEEEEeCccCccccc-C--------CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh--cCCCCCH
Q psy12791 174 DILLVLDNTFLTAYYQ-K--------SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS--MGVVPSP 242 (393)
Q Consensus 174 ~~~livDea~~~~~~~-~--------~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~ 242 (393)
++++|+||+|+.+.+. . ......|++++|+||++ |.+| ||++++ +++++.++..... ++...++
T Consensus 208 ~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~-g~~G---G~~~~~-~~~~~~l~~~~~~~~~s~~~~~ 282 (410)
T PRK13392 208 NALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAF-GCLG---GYIAAS-ADLIDFVRSFAPGFIFTTALPP 282 (410)
T ss_pred CCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhh-hccc---chhhcC-HHHHHHHHHhCcchhccCcCCH
Confidence 9999999999954421 1 11123579999999999 5665 899886 8888877755432 2333344
Q ss_pred HHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHH
Q psy12791 243 FDCWLVTRGL---KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETR 319 (393)
Q Consensus 243 ~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (393)
..+..+...+ +......+++.++.+.+.+.|+.. ++. + .+. .++++.+.+ ++.....
T Consensus 283 ~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~----------------~~~~~~i~~-~~~~~~~ 342 (410)
T PRK13392 283 AVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNAN-GIP-V-MPS----------------PSHIVPVMV-GDPTLCK 342 (410)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC-C-CCC----------------CCCEEEEEe-CCHHHHH
Confidence 4443333333 333344566677777888888754 221 1 111 145665666 3444455
Q ss_pred HHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 320 IFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 320 ~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+.+.|. ..++.+..+.. |. . .....++|+|++..+++++++.+.++|+++.
T Consensus 343 ~~~~~L~~~~GI~v~~~~~------p~------~--------~~~~~~lRis~~~~~t~edid~l~~aL~~~~ 395 (410)
T PRK13392 343 AISDRLMSEHGIYIQPINY------PT------V--------PRGTERLRITPTPLHDDEDIDALVAALVAIW 395 (410)
T ss_pred HHHHHHHHhCCEEEeeeCC------CC------C--------CCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 6666653 33444433211 10 0 0114689999999999999999999998764
No 159
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=4e-26 Score=215.75 Aligned_cols=312 Identities=12% Similarity=0.093 Sum_probs=205.1
Q ss_pred CCCCCCCccCCeeeeCCCCCCCC-Cccc-------c---CCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhc
Q psy12791 27 QCVIPPIILSTTFKQNTPGQPPQ-GFEY-------S---RSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLL 94 (393)
Q Consensus 27 ~~~~~p~~~~~~~~~~~~~~~~~-~~~y-------~---~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~ 94 (393)
|-|.||+...-.+.++..+.+.. ...| + .-..+...++++.+|+++|.++.+++++|++++ .++.+++
T Consensus 8 ~~~~~~~~~~g~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~ 87 (370)
T TIGR02539 8 SINLNPLQRGGVLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALC 87 (370)
T ss_pred ccccChhhhCCCCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhh
Confidence 55788887766665544332100 0000 0 111246788999999999999877777777777 7777888
Q ss_pred CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCC-------CCcEEEEecCCCCccccc
Q psy12791 95 SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKP-------NTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 95 ~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~-------~~~~v~l~~p~nptG~~~ 160 (393)
++||.|+++.+.|.+. + ..++..|++++.++.+ |++++++.+.+ ++++|++++|+||||.+.
T Consensus 88 ~~gd~Vl~~~~~h~s~---~-~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~ 163 (370)
T TIGR02539 88 KEGDWVVLDGLAHYTS---Y-VAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLP 163 (370)
T ss_pred CCCCEEEECCcccHHH---H-HHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCcccc
Confidence 9999999999998763 3 3467889999999875 78999888752 678999999999999999
Q ss_pred CHHHHHHHHHhCCCcEEEEeCccCcccccC-CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcC--
Q psy12791 161 DVKAISAVVKQHPDILLVLDNTFLTAYYQK-SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMG-- 237 (393)
Q Consensus 161 ~~~~l~~l~~~~~~~~livDea~~~~~~~~-~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~-- 237 (393)
|+++|.++|+++ |+++++|++|+.+.... ....+.|++++|+||++ |. |.|+||++++ +++++.++....++.
T Consensus 164 ~l~~i~~la~~~-~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~-~~-~g~~G~l~~~-~~~i~~l~~~~~~~~~~ 239 (370)
T TIGR02539 164 DAGKVAKVCREK-GVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSM-AA-SGPCGVLGMS-EEWEDIVLRKSRYSPVK 239 (370)
T ss_pred CHHHHHHHHHHc-CCeEEEECccccCCcCCCHHHcCCCEEEeeCcccc-cC-CCCEEEEEEC-HHHHhhhcccccCCccc
Confidence 999999999999 99999999999864321 22346899999999999 44 4479999997 888888765543221
Q ss_pred ------CCCCHHHHHHHHhccCCHHH---HHHHHHHHHHHHHHHHhhCCCcceE-eCCCCCCCcchHHHhhhcCCCcceE
Q psy12791 238 ------VVPSPFDCWLVTRGLKTLPC---RLKEHERGSIEVAKFLESHPCVKGV-LHPGLPSHPNHELAKSQWSGTSGML 307 (393)
Q Consensus 238 ------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~v-~~~~l~~~~~~~~~~~~~~~~~~~~ 307 (393)
..........+...++.... ++.+..++.+++.+.|++.+ +..+ ..|. ..+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~s----------------~t~~v 302 (370)
T TIGR02539 240 EVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDIG-FIQLGQKPK----------------EHDLV 302 (370)
T ss_pred eeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-cEEEccCCC----------------cCceE
Confidence 11111112122222222111 22333444567788887653 2211 1111 24667
Q ss_pred EEEEcCC-------HHHHHHHHHhcCccccc-cccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHH
Q psy12791 308 SFYVNGG-------AEETRIFLESLLIFRCA-ESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDL 379 (393)
Q Consensus 308 ~~~~~~~-------~~~~~~~~~~l~~~~~~-~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~ 379 (393)
.+.++.- ......+.+.|...++. +.+ + .++++|+|+. ..++++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~--------------------------~-~~~~iRis~~-~~t~e~ 354 (370)
T TIGR02539 303 KFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRS--------------------------G-QTKYFKLSVY-GLTKEQ 354 (370)
T ss_pred EEECCchhHHhhhhccccHHHHHHHHhCCCccccC--------------------------C-cceEEEEEec-CCCHHH
Confidence 6766321 11234566666554442 111 1 1469999984 568888
Q ss_pred HHHHHHHHHHhh
Q psy12791 380 IADLDQALRKAC 391 (393)
Q Consensus 380 i~~l~~al~~~~ 391 (393)
++.+.++|+++.
T Consensus 355 i~~l~~~L~~~~ 366 (370)
T TIGR02539 355 VEYVVDSFEEIV 366 (370)
T ss_pred HHHHHHHHHHHH
Confidence 888888887664
No 160
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.95 E-value=3.6e-26 Score=218.23 Aligned_cols=214 Identities=13% Similarity=0.088 Sum_probs=149.8
Q ss_pred CCchHHHHHHHHHHHhC-------CCcEE--EeccHHHH-H-HHHHHh--cCCCCeEEEcCCCccchHHHHHHhcccCCc
Q psy12791 57 NNPTRRNLERCIASLEE-------AKHGL--CYSSGLGA-V-TAVTHL--LSAGDHIISGDDVYGGTYRYFAQVAPKIGL 123 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~-------~~~~i--~~~~G~~a-l-~~~~~~--~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~ 123 (393)
+..+..+||+++|+++. .+++| ++|+|+++ + .++..+ +++||.|++++|+|+. +...++..|+
T Consensus 67 ~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~----~~~~~~~~g~ 142 (396)
T PRK09257 67 PIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPN----HRAIFEAAGL 142 (396)
T ss_pred CCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCccc----HHHHHHHcCC
Confidence 34678899999999852 12455 88999775 6 444333 5899999999999985 7788889999
Q ss_pred EEEeeCC---C----CHHHHHhhcC---CCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC
Q psy12791 124 EVDFVDL---R----KIENLIKYIK---PNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK 190 (393)
Q Consensus 124 ~v~~~~~---~----d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~ 190 (393)
+++.++. + |++.+++.+. ++++++++++||||||.+++ +++|+++|+++ ++++|+||+|..+.+..
T Consensus 143 ~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~-~~~ii~De~Y~~l~~~~ 221 (396)
T PRK09257 143 EVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKER-GLIPFLDIAYQGFGDGL 221 (396)
T ss_pred cEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEeccccccccch
Confidence 9999885 1 6788887765 33566666999999999998 67788889999 99999999998765320
Q ss_pred -----C---C--CCcCcEEEEcccccccCCCCceEEEEEe--cChHHH----HHHHHHHHhcCCCCCHHHHHHHHhccCC
Q psy12791 191 -----S---L--PWGVDIVLYSLTKYMNGHSDVVMGATVT--NDDSLQ----ARLKFLQNSMGVVPSPFDCWLVTRGLKT 254 (393)
Q Consensus 191 -----~---~--~~~~di~~~S~sK~~~G~~G~r~G~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (393)
+ + .....++++||||.+ |++|+|+||+++ ++++.. +.++..........+...+..+...++.
T Consensus 222 ~~~~~~~~~~~~~~~~vi~i~SfSK~~-~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~ 300 (396)
T PRK09257 222 EEDAYGLRAFAAAGLELLVASSFSKNF-GLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILND 300 (396)
T ss_pred HHHHHHHHHHHhcCCcEEEEEEcCCcC-ccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCC
Confidence 1 0 113569999999999 699999999984 334433 3333322222233345444444443332
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 255 ----------LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 255 ----------~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
+...++.+.++++.+.+.|+++
T Consensus 301 ~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~ 332 (396)
T PRK09257 301 PELRAEWEAELEEMRERIKAMRQLLVEALKAK 332 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2224455566777777888764
No 161
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.95 E-value=3.7e-26 Score=216.88 Aligned_cols=292 Identities=17% Similarity=0.189 Sum_probs=200.4
Q ss_pred chHHHHHHHHHHHhCCC--cEEEeccHHH-HH-HHHHHhcC---CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 59 PTRRNLERCIASLEEAK--HGLCYSSGLG-AV-TAVTHLLS---AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~--~~i~~~~G~~-al-~~~~~~~~---~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
....++|+.+++++|.+ +.+++++|++ ++ .++.++.. +||+|++++++|++.+..+...++..|++++.++.+
T Consensus 43 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 122 (373)
T cd06453 43 DAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD 122 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC
Confidence 34568999999999976 4676666665 57 66667766 899999999999886655666677889999999875
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEcccc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTK 205 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK 205 (393)
|++++++.+.+++++|++++|+||||.+.|+++|.++|+++ |+++++|++++.+....+. ..+.|+++.|++|
T Consensus 123 ~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 201 (373)
T cd06453 123 DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEA-GVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHK 201 (373)
T ss_pred CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHc-CCEEEEEhhhhcCceeeeccccCCCEEEecccc
Confidence 78999999988999999999999999999999999999999 9999999999865543222 3578999999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHHhc---------------------CCCCCHHHHHHHHhcc-----CCHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQNSM---------------------GVVPSPFDCWLVTRGL-----KTLPCRL 259 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~-----~~~~~~~ 259 (393)
+++ ++| +|+++++ +++++.++...... ...+.......+...+ ..+....
T Consensus 202 ~~~-~~g--~g~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~ 277 (373)
T cd06453 202 MLG-PTG--IGVLYGK-EELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIA 277 (373)
T ss_pred ccC-CCC--cEEEEEc-hHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHH
Confidence 995 466 8999997 77777665322100 0111111111111111 2344455
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccc
Q psy12791 260 KEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIES 339 (393)
Q Consensus 260 ~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s 339 (393)
++..+..+.+.+.|+.++++..+ .+. ...++++.|.+++ .....+.+.+...++.+..|..++
T Consensus 278 ~~~~~~~~~l~~~l~~~~~~~~~-~~~--------------~~~~~~~~~~~~~--~~~~~i~~~l~~~gi~i~~g~~~~ 340 (373)
T cd06453 278 AHEHELTAYALERLSEIPGVRVY-GDA--------------EDRAGVVSFNLEG--IHPHDVATILDQYGIAVRAGHHCA 340 (373)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEe-CCc--------------cccCCeEEEEECC--cCHHHHHHHHHHCCEEeccCccch
Confidence 55566677777888777665432 111 1124678888853 123344445444455555443321
Q ss_pred cccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 340 LADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
.. . ...+| .+++||+|++..+++++++.+.++|
T Consensus 341 ~~---~-----------~~~~~-~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 341 QP---L-----------MRRLG-VPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred hH---H-----------HHHhC-CCCeEEEEecCCCCHHHHHHHHhhC
Confidence 10 0 00112 2579999999999999999998764
No 162
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.95 E-value=4.9e-26 Score=213.96 Aligned_cols=315 Identities=20% Similarity=0.225 Sum_probs=212.2
Q ss_pred CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-------cEEEeccHHH-HH-HHHHHhcCCC
Q psy12791 27 QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-------HGLCYSSGLG-AV-TAVTHLLSAG 97 (393)
Q Consensus 27 ~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-------~~i~~~~G~~-al-~~~~~~~~~g 97 (393)
+.+.+|+...+.+..+..........+...+.++..++++.++++++.. +.+++++|++ ++ .++..+.++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g 83 (350)
T cd00609 4 SIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPG 83 (350)
T ss_pred CCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCC
Confidence 5677787777666655432101122233335678889999999987632 4566666655 57 6666778889
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CH--HHHHhhcCCCCcEEEEecCCCCcccccCHHHH---HH
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KI--ENLIKYIKPNTKMVWIENPTNPLMTVFDVKAI---SA 167 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~--~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l---~~ 167 (393)
|+|++++++|.+ +...++..|.+++.++.+ +. +.++....+++++|++++|+||||.++|.+++ .+
T Consensus 84 ~~vl~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~ 159 (350)
T cd00609 84 DEVLVPDPTYPG----YEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAE 159 (350)
T ss_pred CEEEEcCCCchh----HHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHH
Confidence 999999999986 556677889999988875 22 56666667789999999999999999986555 48
Q ss_pred HHHhCCCcEEEEeCccCcccccC--------CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCC
Q psy12791 168 VVKQHPDILLVLDNTFLTAYYQK--------SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVV 239 (393)
Q Consensus 168 l~~~~~~~~livDea~~~~~~~~--------~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 239 (393)
+|+++ |+++|+|++|+.+.... ....++|++++|++|++ |.+|.++|+++++++++.+.++.........
T Consensus 160 ~~~~~-~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~-~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~ 237 (350)
T cd00609 160 LAKKH-GILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTF-GLPGLRIGYLIAPPEELLERLKKLLPYTTSG 237 (350)
T ss_pred HHHhC-CeEEEEecchhhceeCCcccccccCcCccCcEEEEeeccccc-CCcccceEEEecCHHHHHHHHHHHHHhcccC
Confidence 99999 99999999998754321 11246789999999999 5789999999998448888887766654444
Q ss_pred CCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH
Q psy12791 240 PSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA 315 (393)
Q Consensus 240 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
.+...+..+...++. .....+...++++.+.+.|+..+.... .. ...+.++++.+.+ .
T Consensus 238 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~----------------~~~g~~~~~~~~~-~ 299 (350)
T cd00609 238 PSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVV-VK----------------PSGGFFLWLDLPE-G 299 (350)
T ss_pred CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-cC----------------CCccEEEEEecCC-C
Confidence 555554444444433 344455566777788888876554321 11 1124667888743 2
Q ss_pred HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 316 EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
...+.+.+.+...++.+..++.+.. ..+.++|++++.. +++++.+.++|+
T Consensus 300 ~~~~~~~~~l~~~gi~i~~~~~~~~---------------------~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 300 DDEEFLERLLLEAGVVVRPGSAFGE---------------------GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred ChHHHHHHHHHhCCEEEeccccccc---------------------CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 2233344444444444443332210 1257999999998 777777777765
No 163
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.95 E-value=4.5e-26 Score=217.27 Aligned_cols=319 Identities=16% Similarity=0.116 Sum_probs=216.2
Q ss_pred CCCCC-CCCCCC-CccCCeeeeCCCCCCCC------CccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHH
Q psy12791 22 DQWRS-QCVIPP-IILSTTFKQNTPGQPPQ------GFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTH 92 (393)
Q Consensus 22 ~~~~~-~~~~~p-~~~~~~~~~~~~~~~~~------~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~ 92 (393)
.+++| +++.++ +.+++.+.+++.+.+.. .+.+.....+...+++++++++++.++.+++++|++++ .++..
T Consensus 39 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~~~l~~ 118 (385)
T PRK05958 39 RRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAERALLFSSGYAANLAVLTA 118 (385)
T ss_pred ceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHH
Confidence 46677 556543 23455566555433211 01111223566889999999999988899999999886 66667
Q ss_pred hcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCC---CCcEEEEecCCCCcccccCHHHHHHHH
Q psy12791 93 LLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKP---NTKMVWIENPTNPLMTVFDVKAISAVV 169 (393)
Q Consensus 93 ~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~l~ 169 (393)
++++||+|++++++|+. +...++..|.+++.++..|++++++.+.+ +++++++++++|++|...++++|.++|
T Consensus 119 ~~~~gd~V~~~~~~~~~----~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia 194 (385)
T PRK05958 119 LAGKGDLIVSDKLNHAS----LIDGARLSRARVRRYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALA 194 (385)
T ss_pred hCCCCCEEEEeCccCHH----HHHHHHhcCCceEEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHH
Confidence 78999999999999985 44456678999999988889999988864 356777788999999999999999999
Q ss_pred HhCCCcEEEEeCccCccccc-C--------CCC-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh--cC
Q psy12791 170 KQHPDILLVLDNTFLTAYYQ-K--------SLP-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS--MG 237 (393)
Q Consensus 170 ~~~~~~~livDea~~~~~~~-~--------~~~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~--~~ 237 (393)
+++ |+++|+||+|+.+... . .+. ...++++.|+||++ |++| ||++++ +++.+.+...... .+
T Consensus 195 ~~~-~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G---g~~~~~-~~~~~~~~~~~~~~~~~ 268 (385)
T PRK05958 195 RRH-GAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSG---AAVLGS-ETLIDYLINRARPFIFT 268 (385)
T ss_pred HHh-CCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCC---cEEEcC-HHHHHHHHHhCccceec
Confidence 999 9999999999765332 0 111 23458999999999 5665 888887 7777776533211 22
Q ss_pred CCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC
Q psy12791 238 VVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG 314 (393)
Q Consensus 238 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
...++..+..+...++. .....++..++.+.+.+.|++.+ +. +. ...++++++.++ +
T Consensus 269 ~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~-~~-----------------~~~~~~~~~~~~-~ 328 (385)
T PRK05958 269 TALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG-FQ-LM-----------------DSQSAIQPLIVG-D 328 (385)
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-CC-cC-----------------CCCCCEEEEEeC-C
Confidence 33445554433333322 23455666677778888887542 11 11 112578888884 4
Q ss_pred HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 315 AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
......+.+.+...++.+..+...+. ...++++|+|++..+++++++.+.++|+++
T Consensus 329 ~~~~~~~~~~l~~~gI~v~~~~~~~~--------------------~~~~~~lRis~~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 329 NERALALAAALQEQGFWVGAIRPPTV--------------------PAGTSRLRITLTAAHTEADIDRLLEALAEA 384 (385)
T ss_pred HHHHHHHHHHHHHCCceEecccCCCC--------------------CCCCceEEEEecCCCCHHHHHHHHHHHHhc
Confidence 44556677776655555543221100 011468999999999999999988888754
No 164
>PRK10534 L-threonine aldolase; Provisional
Probab=99.95 E-value=2.6e-26 Score=214.46 Aligned_cols=302 Identities=18% Similarity=0.161 Sum_probs=201.6
Q ss_pred CC-CCCCCCCccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEE
Q psy12791 25 RS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHII 101 (393)
Q Consensus 25 ~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl 101 (393)
+| ++|+||. |++...+++.+.... ..+| +++...+|+++||+++|.+..+++++|++++ ..+..++.+||+|+
T Consensus 2 ~~~~~~~~~~-p~~~~~~a~~~~~~~---~~~Y~~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~~gd~vi 77 (333)
T PRK10534 2 IDLRSDTVTR-PSRAMLEAMMAAPVG---DDVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYI 77 (333)
T ss_pred cccccccCCC-CCHHHHHHHHhccCC---CcccCCCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcCCCCeeE
Confidence 57 8999999 888888877654332 3345 6899999999999999999888888888885 66677789999999
Q ss_pred EcCCCccchHHHHHHh-cccCC-cEEEeeCCC-----CHHHHHhhcCC------CCcEEEEecCCCCcccccCHHHH---
Q psy12791 102 SGDDVYGGTYRYFAQV-APKIG-LEVDFVDLR-----KIENLIKYIKP------NTKMVWIENPTNPLMTVFDVKAI--- 165 (393)
Q Consensus 102 ~~~~~y~~~~~~~~~~-~~~~g-~~v~~~~~~-----d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l--- 165 (393)
++.|.|... +... +...+ ++++.++.+ |++++++++.+ ++++|+++||+ ||.++|.++|
T Consensus 78 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i 152 (333)
T PRK10534 78 VGQAAHNYL---YEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQA 152 (333)
T ss_pred EechhhhhH---hcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHH
Confidence 988887522 2211 12333 677766543 68999998865 58999999776 4999996554
Q ss_pred HHHHHhCCCcEEEEeCccCcccc---cCCC---CCcCcEEEEcccccccCCCCceEE-EEEecChHHHHHHHHHHHhcCC
Q psy12791 166 SAVVKQHPDILLVLDNTFLTAYY---QKSL---PWGVDIVLYSLTKYMNGHSDVVMG-ATVTNDDSLQARLKFLQNSMGV 238 (393)
Q Consensus 166 ~~l~~~~~~~~livDea~~~~~~---~~~~---~~~~di~~~S~sK~~~G~~G~r~G-~~~~~~~~~~~~~~~~~~~~~~ 238 (393)
.++|+++ ++++++||+|..... .... ....+.++.||||.+ |.+ +| |++++ +++++.++.....++.
T Consensus 153 ~~~~~~~-~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~-~~~---~G~~~~~~-~~~i~~~~~~~~~~~~ 226 (333)
T PRK10534 153 WEFTRER-NLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGL-GTP---VGSLLVGN-RDYIKRARRWRKMTGG 226 (333)
T ss_pred HHHHHHc-CCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCC-CCc---ccceEEcC-HHHHHHHHHHHHHhCC
Confidence 5678888 999999999874211 1111 112355566999998 454 56 67775 8999999877765543
Q ss_pred CCC--HHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHH
Q psy12791 239 VPS--PFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAE 316 (393)
Q Consensus 239 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
..+ ...+..+...++.....+++..++++.+.+.|+++ ++. +..+ .+.++++.+++ .
T Consensus 227 ~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-----------------~~nfv~~~~~~--~ 285 (333)
T PRK10534 227 GMRQAGILAAAGLYALKHNVARLQEDHDNAAWLAEQLREA-GAD-VMRQ-----------------DTNMLFVRVGE--E 285 (333)
T ss_pred chhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhC-CCc-cCCC-----------------CceEEEEECCc--h
Confidence 332 22233333344433344555556677888888865 322 2111 25688888842 2
Q ss_pred HHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 317 ETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
....+.+.+...++.+..| ..+|++...-.+.++++.+.++|+++.
T Consensus 286 ~~~~~~~~l~~~gi~v~~~-----------------------------~~~rl~~~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 286 QAAALGEYMRERNVLINAS-----------------------------PIVRLVTHLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred hHHHHHHHHHHcCeeecCC-----------------------------ceEEEEEEeCCCHHHHHHHHHHHHHHh
Confidence 3445555555545444321 246777765567888888888887654
No 165
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.8e-26 Score=222.49 Aligned_cols=191 Identities=21% Similarity=0.253 Sum_probs=137.5
Q ss_pred CCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHh------CC-----CcEEEeccHHHH-H-HHHH
Q psy12791 25 RSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLE------EA-----KHGLCYSSGLGA-V-TAVT 91 (393)
Q Consensus 25 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~------~~-----~~~i~~~~G~~a-l-~~~~ 91 (393)
++-+...|-.+++.+..+..+.+.. ..|+ +.++..++|+++++.+ +. +++|++|+|+++ + .++.
T Consensus 103 i~l~~g~p~~~~~~~v~e~~~~~~~-~~Y~--~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~ 179 (527)
T PRK09275 103 VSYVRDQLGFDADEFVYELVDGIIG-DNYP--VPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFD 179 (527)
T ss_pred HhhcCCCCCCCCCHHHHHHHHHHhc-CCCC--CCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 4423334444555555545444322 2344 3467788999999832 11 138999999876 6 5555
Q ss_pred H-----hcCCCCeEEEcCCCccchHHHHHHhcccC--CcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcc
Q psy12791 92 H-----LLSAGDHIISGDDVYGGTYRYFAQVAPKI--GLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLM 157 (393)
Q Consensus 92 ~-----~~~~gd~vl~~~~~y~~~~~~~~~~~~~~--g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG 157 (393)
+ +++|||+|++++|+|+. |...++.. |++++.++.+ |++++++++++++|+|++++||||||
T Consensus 180 aL~~~~ll~pGD~Vlv~~P~y~~----Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG 255 (527)
T PRK09275 180 SLKENGLLKAGDKIALMTPIFTP----YLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPS 255 (527)
T ss_pred HHhhhhcCCCCCEEEEeCCChHH----HHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcC
Confidence 4 68999999999999984 66655544 5666666542 67889998888999999999999999
Q ss_pred cccC---HHHHHHHHHhC-CCcEEEEeCccCccccc-CCC---CCcCcEEEEcccccccCCCCceEEEEEecCh
Q psy12791 158 TVFD---VKAISAVVKQH-PDILLVLDNTFLTAYYQ-KSL---PWGVDIVLYSLTKYMNGHSDVVMGATVTNDD 223 (393)
Q Consensus 158 ~~~~---~~~l~~l~~~~-~~~~livDea~~~~~~~-~~~---~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~ 223 (393)
.+++ +++|+++|+++ ++++||+||+|..+... .++ ...+.+++.||||.+ |++|+|+||++++++
T Consensus 256 ~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f-~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 256 VAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYF-GATGWRLGVIALHED 328 (527)
T ss_pred CCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhc-cCcHhHHhhhhcCch
Confidence 9999 66777788543 38999999999986532 111 124679999999999 799999999999854
No 166
>PRK07179 hypothetical protein; Provisional
Probab=99.95 E-value=1.5e-25 Score=214.69 Aligned_cols=283 Identities=13% Similarity=0.122 Sum_probs=202.4
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENL 136 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l 136 (393)
.+...+|+++||+++|.++.+++++|++|+ .++.++..+||.|++..+.|.+. ...++..|++++.++..|++++
T Consensus 98 ~~~~~~le~~la~~~g~~~~~~~~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~----~~~~~~~g~~~~~~~~~d~~~l 173 (407)
T PRK07179 98 DSPKPQFEKKLAAFTGFESCLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSL----WEGVRAAGAQAHPFRHNDVDHL 173 (407)
T ss_pred chHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEECCcCHHH----HHHHHHCCCeEEEecCCCHHHH
Confidence 357889999999999998889999999997 77788888999999999888763 2334567888888887899999
Q ss_pred HhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-C------CCC--CcCcEEEEccccc
Q psy12791 137 IKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ-K------SLP--WGVDIVLYSLTKY 206 (393)
Q Consensus 137 ~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~-~------~~~--~~~di~~~S~sK~ 206 (393)
++.+++ ++++|++++++||||.+.|+++|.++|+++ |+++|+||+|+.+... . ... .+.|+++.|+||+
T Consensus 174 ~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~-~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~ 252 (407)
T PRK07179 174 RRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEF-GCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKA 252 (407)
T ss_pred HHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHc-CCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHh
Confidence 998876 478999999999999999999999999999 9999999999864321 1 111 2358999999999
Q ss_pred ccCCCCceEEEEEecChHHHHHHHHHHH--hcCCCCCHHHHHHH---HhccCCHHHHHHHHHHHHHHHHHHHhhCCCcce
Q psy12791 207 MNGHSDVVMGATVTNDDSLQARLKFLQN--SMGVVPSPFDCWLV---TRGLKTLPCRLKEHERGSIEVAKFLESHPCVKG 281 (393)
Q Consensus 207 ~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 281 (393)
+ |. |+||++++ +++++.++.... .+++...+.....+ ++.++....+++++.++...+.+.|+++ ++.
T Consensus 253 ~-g~---~~G~l~~~-~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~- 325 (407)
T PRK07179 253 F-AG---RAGIITCP-RELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL-GYN- 325 (407)
T ss_pred h-hc---cCeEEEeC-HHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC-
Confidence 9 43 59999987 777776654332 13333334333322 2223333445677777788888888764 221
Q ss_pred EeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcC
Q psy12791 282 VLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALG 361 (393)
Q Consensus 282 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g 361 (393)
+. +.+.++.+.+ ++....+.+.+.|...++..+ . .+.+.. .
T Consensus 326 v~------------------~~~~i~~l~~-~~~~~~~~~~~~L~~~GI~~~---~---~~~p~~--------------~ 366 (407)
T PRK07179 326 IR------------------SESQIIALET-GSERNTEVLRDALEERNVFGA---V---FCAPAT--------------P 366 (407)
T ss_pred CC------------------CCCCEEEEEe-CCHHHHHHHHHHHHHCCceEe---e---ecCCCC--------------C
Confidence 11 1246888887 444455666666654444321 1 111110 0
Q ss_pred CCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 362 ITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 362 ~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
...+.||||++..+++++++.+.++|+++.
T Consensus 367 ~~~~~lRis~~~~~t~edi~~~~~~l~~~~ 396 (407)
T PRK07179 367 KNRNLIRLSLNADLTASDLDRVLEVCREAR 396 (407)
T ss_pred CCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 125799999999999999999999998764
No 167
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.95 E-value=1.8e-25 Score=198.96 Aligned_cols=312 Identities=20% Similarity=0.210 Sum_probs=217.7
Q ss_pred CccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCC---cEEEeccH-HHHH-HHHHHhcCCCCeEEEcCCC
Q psy12791 33 IILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLEEAK---HGLCYSSG-LGAV-TAVTHLLSAGDHIISGDDV 106 (393)
Q Consensus 33 ~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~~~~---~~i~~~~G-~~al-~~~~~~~~~gd~vl~~~~~ 106 (393)
|..++.+.+++.+.... .+.|+.-++.....+....++.++.. +.|+++.| ..++ .++..+.++||.|++..|.
T Consensus 37 f~~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPv 116 (388)
T COG1168 37 FPTPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPV 116 (388)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEecCCC
Confidence 33344444444444333 37777333345666666666666643 67777777 4568 8889999999999999999
Q ss_pred ccchHHHHHHhcccCCcEEEeeCCC--------CHHHHHhhcCCC-CcEEEEecCCCCcccccC---HHHHHHHHHhCCC
Q psy12791 107 YGGTYRYFAQVAPKIGLEVDFVDLR--------KIENLIKYIKPN-TKMVWIENPTNPLMTVFD---VKAISAVVKQHPD 174 (393)
Q Consensus 107 y~~~~~~~~~~~~~~g~~v~~~~~~--------d~~~l~~~l~~~-~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~ 174 (393)
|++ +.+..+..|-++...|+. |.++|++++.+. ++++++||||||||.++. +.+|.++|.+| |
T Consensus 117 Y~P----F~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh-~ 191 (388)
T COG1168 117 YPP----FYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRH-G 191 (388)
T ss_pred chH----HHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHc-C
Confidence 995 667778899999999874 899999988754 799999999999999998 66788899999 9
Q ss_pred cEEEEeCccCcccccC--CCC--------CcCcEEEEcccccccCCCCceEEEEEecChHHHHHH-HHHHHhcCCCCCHH
Q psy12791 175 ILLVLDNTFLTAYYQK--SLP--------WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARL-KFLQNSMGVVPSPF 243 (393)
Q Consensus 175 ~~livDea~~~~~~~~--~~~--------~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 243 (393)
+.||.||.+++.++.. ... ..+.+.+.|.||.|+ ++|+.+++++.+++++.++. +++.......++.+
T Consensus 192 v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFN-laGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~l 270 (388)
T COG1168 192 VRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFN-LAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSAL 270 (388)
T ss_pred CEEEeecccccccccCCCccchhhcChhhhcceEEEeecccccc-chhhhheeEEecCHHHHHHHHHHHHHhcCCCCchH
Confidence 9999999999966532 111 134589999999995 99999999999888875554 33333334444544
Q ss_pred HHHHH----HhccCCHHHHHHHHHHHHHHHHHHHhh-CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC---CH
Q psy12791 244 DCWLV----TRGLKTLPCRLKEHERGSIEVAKFLES-HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG---GA 315 (393)
Q Consensus 244 ~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 315 (393)
...+. ..+-..+....+.+..|...+.+++.. .|.+. +..|. ...++|+.++. +.
T Consensus 271 g~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~-v~~p~----------------gTYL~WLD~r~l~l~d 333 (388)
T COG1168 271 GIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVK-VTEPQ----------------GTYLAWLDCRELGLDD 333 (388)
T ss_pred HHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EecCC----------------CceeeeeeccccCCCh
Confidence 43222 233344666777778899999999975 45655 44443 13678988763 43
Q ss_pred HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC--ChHHHHHHHHHHHHHh
Q psy12791 316 EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE--GYTDLIADLDQALRKA 390 (393)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~--~~~~~i~~l~~al~~~ 390 (393)
++.+.++.. ..+++++.|..|.- ...+++|+.++-. ..++-++++..+|+++
T Consensus 334 ~~l~~~ll~--~akVal~~G~~FG~---------------------~g~gf~RlN~acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 334 SELAEFLLE--EAKVALSPGSTFGE---------------------EGSGFVRLNFACPRAILEEALERLKRALKKR 387 (388)
T ss_pred HHHHHHHHH--hhcEeccCCCccCc---------------------CCCceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence 444444432 23566676655421 1269999999755 4577778888777653
No 168
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=8.2e-26 Score=216.26 Aligned_cols=293 Identities=17% Similarity=0.178 Sum_probs=194.4
Q ss_pred hHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHh---cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--
Q psy12791 60 TRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHL---LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-- 131 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~---~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-- 131 (393)
..+++|+.+++++|.+ +.+++++|+++ + .++.++ +++||+|++++++|.+++..+...++..|++++.++.+
T Consensus 61 ~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~ 140 (397)
T TIGR01976 61 VVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA 140 (397)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc
Confidence 3578999999999986 46888788776 5 344333 68999999999999887767777778899999988764
Q ss_pred ----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEccccc
Q psy12791 132 ----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTKY 206 (393)
Q Consensus 132 ----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK~ 206 (393)
|++++++.+.+++++|++++|+||||.+.|+++|.++|+++ |+++++|+++..+.....+ ..++|+++.|+||+
T Consensus 141 ~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~-~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~ 219 (397)
T TIGR01976 141 TGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAA-GALVVVDAVHYAPHGLIDVQATGADFLTCSAYKF 219 (397)
T ss_pred CCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHc-CCEEEEehhhhccccCCCHHHcCCCEEEEechhh
Confidence 68999999988899999999999999999999999999999 9999999998754332222 25789999999999
Q ss_pred ccCCCCceEEEEEecChHHHHHHHHHHHhc----------CCCCCHHHHHHHHhccCC-------------------HHH
Q psy12791 207 MNGHSDVVMGATVTNDDSLQARLKFLQNSM----------GVVPSPFDCWLVTRGLKT-------------------LPC 257 (393)
Q Consensus 207 ~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~-------------------~~~ 257 (393)
+ |+ |+||++++ +++++.+......+ .++.+......+..+++. +..
T Consensus 220 ~-g~---~~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~ 294 (397)
T TIGR01976 220 F-GP---HMGILWGR-PELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQA 294 (397)
T ss_pred c-CC---ceEEEEEc-HHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHH
Confidence 8 54 48999997 77776654322111 111221111111111111 122
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCc
Q psy12791 258 RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGI 337 (393)
Q Consensus 258 ~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~ 337 (393)
..++..+..+.+.+.|+.++.+. +..+. . .....+++.+.+.+ .....+.+.|...++.++.|..
T Consensus 295 ~~~~~~~l~~~l~~~L~~~~~~~-~~~~~-~-----------~~~~~~~~~~~~~~--~~~~~l~~~L~~~gI~v~~~~~ 359 (397)
T TIGR01976 295 IDAYENRLAEYLLVGLSDLPGVT-LYGVA-R-----------LAARVPTVSFTVHG--LPPQRVVRRLADQGIDAWAGHF 359 (397)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEE-EeCCC-C-----------ccCCCceEEEEeCC--cCHHHHHHHHHHCCeEEEeCcc
Confidence 23333344555666666555443 22110 0 01124678887743 1233455555555666655433
Q ss_pred cccccCcccccCCCCChhhHhhcCC--CCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 338 ESLADLPAEMTHKSIPKETRDALGI--TDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 338 ~s~~~~~~~~~~~~~~~~~~~~~g~--~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
+... .....|+ ..++||+|++.++++++++.+.++|
T Consensus 360 ~~~~--------------~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 360 YAVR--------------LLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred chHH--------------HHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 3210 0111222 2478999999999999999998764
No 169
>KOG0633|consensus
Probab=99.95 E-value=2.3e-26 Score=193.16 Aligned_cols=304 Identities=16% Similarity=0.219 Sum_probs=211.3
Q ss_pred CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCC-CeEEE
Q psy12791 27 QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAG-DHIIS 102 (393)
Q Consensus 27 ~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~g-d~vl~ 102 (393)
+.|++|.+|+|.-.+ +. .+|+++-..+++.+++.--+.. +.|+++-|+.+ | ..+...+.|| ++|+.
T Consensus 47 d~~e~~ryPdP~q~e---------fk-~~~~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~ 116 (375)
T KOG0633|consen 47 DANENPRYPDPEQME---------FK-YVYPDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILD 116 (375)
T ss_pred ccccCCCCcCHHHcc---------cc-cccCCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhheecCCccceee
Confidence 467777777654311 11 2345667777888877654433 89999999999 5 6667778899 88999
Q ss_pred cCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC--CCcEEEEecCCCCcccccCHHHHHHHHHhCCCc
Q psy12791 103 GDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP--NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDI 175 (393)
Q Consensus 103 ~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~ 175 (393)
..|+|+ +|.-.+...+++|+.+|.. +.+.+.+.+.. ..|.+|+++|+||||.....+.|.++.+...+.
T Consensus 117 cPPtys----MY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~ng 192 (375)
T KOG0633|consen 117 CPPTYS----MYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNG 192 (375)
T ss_pred cCCcce----eEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCc
Confidence 999998 6777778889999999885 67888777754 489999999999999999999999988864478
Q ss_pred EEEEeCccCccccc-CCC----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHH-HH
Q psy12791 176 LLVLDNTFLTAYYQ-KSL----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWL-VT 249 (393)
Q Consensus 176 ~livDea~~~~~~~-~~~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 249 (393)
++|+||+|.+|... +.+ .+.+.+++.++||.| |++|+|+||...+ ..+.+.+......+..+......++ ++
T Consensus 193 lVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsf-GLAGiRvG~~~~~-~~ia~iln~~KaPYNiS~~~s~~AL~Al 270 (375)
T KOG0633|consen 193 LVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSF-GLAGIRVGYGAFP-LSIAEILNRAKAPYNISVAGSVAALAAL 270 (375)
T ss_pred EEEEeeeeEeeccccccchHhHhCCceeehhhhhhhc-CcceeEeeccccc-HHHHHHHHhccCCccccchhHHHHHHhc
Confidence 99999999997652 211 257889999999999 8999999999997 8888877766655443332222222 21
Q ss_pred h--ccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHh-c
Q psy12791 250 R--GLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLES-L 325 (393)
Q Consensus 250 ~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-l 325 (393)
. ..+.++..++...+.+.++...|...+.+.. +++ +...+++-+++.+ +...+.++... +
T Consensus 271 s~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~--~~g--------------g~daNFiLi~v~~~~n~~akkly~q~a 334 (375)
T KOG0633|consen 271 SDSNGKKMEDVRDAIVRERERLFKELTEVPFLND--YPG--------------GSDANFILIEVTGGDNGMAKKLYKQDA 334 (375)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHhhcCccccC--CCC--------------cccccEEEEEEcCCCcHHHHHHHHHHH
Confidence 1 3345666777777788888888887776543 333 1134677777753 33444444333 3
Q ss_pred CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC-ChHHHHHHHH
Q psy12791 326 LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE-GYTDLIADLD 384 (393)
Q Consensus 326 ~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~-~~~~~i~~l~ 384 (393)
...++.+.+-+.+-. ..|++|+++|.+ ++.-+++.+.
T Consensus 335 t~~gVvVRfrgse~~----------------------c~G~lRitvGt~EentvL~k~~K 372 (375)
T KOG0633|consen 335 TKMGVVVRFRGSEEG----------------------CKGYLRITVGTPEENTVLMKCLK 372 (375)
T ss_pred HhcceEEEEcCCccc----------------------cceeEEEEcCCcccchHHHHHHH
Confidence 333444444333211 269999999855 4444444443
No 170
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.95 E-value=5.7e-26 Score=214.20 Aligned_cols=315 Identities=18% Similarity=0.193 Sum_probs=204.3
Q ss_pred CCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--cEE-EeccHHHHH-HHHHHhcCCCCeEEEcCCC
Q psy12791 31 PPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK--HGL-CYSSGLGAV-TAVTHLLSAGDHIISGDDV 106 (393)
Q Consensus 31 ~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~--~~i-~~~~G~~al-~~~~~~~~~gd~vl~~~~~ 106 (393)
.|...++.+.+++.+... .+.|.. .....+++++.+++++|++ +.+ ++++|++++ .++.+++++||+|++++++
T Consensus 6 ~~~~~~~~v~~a~~~~~~-~~~~~~-~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~ 83 (356)
T cd06451 6 GPSNVPPRVLKAMNRPML-GHRSPE-FLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNG 83 (356)
T ss_pred CCcCCCHHHHHHhCCCcc-CCCCHH-HHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCC
Confidence 344455555555544321 122211 1233678999999999984 344 445556677 6777888999999999888
Q ss_pred ccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEe
Q psy12791 107 YGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLD 180 (393)
Q Consensus 107 y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livD 180 (393)
|.+. .+...++..|++++.++.+ |++++++.+.+ ++++|++++|+||||.+.|+++|.++|+++ |+++++|
T Consensus 84 ~~~~--~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~-~~~li~D 160 (356)
T cd06451 84 VFGD--RWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKH-DALLIVD 160 (356)
T ss_pred chhH--HHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhc-CCEEEEe
Confidence 7653 2445677889999988764 78999999987 899999999999999999999999999999 9999999
Q ss_pred CccCcccccC-CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHH----H---------HH------hcCCCC
Q psy12791 181 NTFLTAYYQK-SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKF----L---------QN------SMGVVP 240 (393)
Q Consensus 181 ea~~~~~~~~-~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~----~---------~~------~~~~~~ 240 (393)
++|+.+.... ....+.|+++.|+||++++++| +||++.+ +++++.+.. . .. ......
T Consensus 161 ~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 237 (356)
T cd06451 161 AVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPG--LGPIAFS-ERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTP 237 (356)
T ss_pred eehhccCccccccccCccEEEecCchhccCCCC--cceeEEC-HHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCC
Confidence 9987543221 1234789999999999976666 8999997 777776643 0 00 111222
Q ss_pred CHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH
Q psy12791 241 SPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA 315 (393)
Q Consensus 241 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
+......+...++ .+....++..+++..+.+.|+.. ++. +..+. . ...+.++++.++ ..
T Consensus 238 ~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~--~-----------~~~~~~~~~~~~-~~ 301 (356)
T cd06451 238 PVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLK-LLAKP--E-----------LRSPTVTAVLVP-EG 301 (356)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCe-eccCc--c-----------cCCCceEEEECC-CC
Confidence 2322222222222 23334455556667777777754 222 11110 0 112344566663 22
Q ss_pred HHHHHHHHhcCcc-ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 316 EETRIFLESLLIF-RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 316 ~~~~~~~~~l~~~-~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
.....+.+.|... ++.+..|..+ ..+++||+|++..+++++++.+.++|+++.+
T Consensus 302 ~~~~~~~~~L~~~~gI~~~~g~~~-----------------------~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 302 VDGDEVVRRLMKRYNIEIAGGLGP-----------------------TAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred CCHHHHHHHHHHhCCEEEeccccc-----------------------ccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 2334455555443 4444433210 0147999999999999999999999987643
No 171
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.95 E-value=6.4e-26 Score=215.75 Aligned_cols=305 Identities=17% Similarity=0.145 Sum_probs=196.5
Q ss_pred CchHHHHHHHHHH---HhCC--CcEEEeccHHHH-H-HHHHHh-----cCC-CCeEEEcCCCccchHHHHHHhcccCCcE
Q psy12791 58 NPTRRNLERCIAS---LEEA--KHGLCYSSGLGA-V-TAVTHL-----LSA-GDHIISGDDVYGGTYRYFAQVAPKIGLE 124 (393)
Q Consensus 58 ~~~~~~lr~~la~---~~~~--~~~i~~~~G~~a-l-~~~~~~-----~~~-gd~vl~~~~~y~~~~~~~~~~~~~~g~~ 124 (393)
......+++++++ .++. +++|++++|+++ + .++.++ .++ +++|+++..+|++... +...++..|++
T Consensus 38 ~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~-~~~~~~~~G~~ 116 (382)
T TIGR03403 38 TATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRA-TCAFLESLGVE 116 (382)
T ss_pred HHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHH-HHHHHHHCCCE
Confidence 3445556665554 4554 378888888776 6 445443 245 4689999988876544 33455778999
Q ss_pred EEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcE
Q psy12791 125 VDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDI 198 (393)
Q Consensus 125 v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di 198 (393)
++.++.+ |++++++.+++++++|++++|+||||.++|+++|.++|+++ |+++++|+++..+...... ..+.|+
T Consensus 117 v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~-g~~~ivD~a~~~g~~~~~~~~~~~D~ 195 (382)
T TIGR03403 117 VTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKER-GVLFHTDAVQAIGKIPVDVQKAGVDF 195 (382)
T ss_pred EEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHc-CCEEEEechhhcCCCccCccccCCCE
Confidence 9999875 68999999988899999999999999999999999999999 9999999999865432222 357899
Q ss_pred EEEcccccccCCCCceEEEEEecChHHH-HHHHH---HHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHH
Q psy12791 199 VLYSLTKYMNGHSDVVMGATVTNDDSLQ-ARLKF---LQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVA 270 (393)
Q Consensus 199 ~~~S~sK~~~G~~G~r~G~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~ 270 (393)
++.|++|++ |++| +|+++.++..-. ..+.. ......+.++......+..+++. ++...++..+.++++.
T Consensus 196 ~~~s~~K~~-gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~ 272 (382)
T TIGR03403 196 LSFSAHKFH-GPKG--VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLE 272 (382)
T ss_pred EEEcchhhC-CCCc--eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999997 7999 788887632110 10000 00000112222222222222221 2333444555566777
Q ss_pred HHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCC
Q psy12791 271 KFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHK 350 (393)
Q Consensus 271 ~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~ 350 (393)
+.|++++++..+ .+. . ...++++.|.+++ ...+.+...|...++.++.|..|+.....
T Consensus 273 ~~L~~~~~~~~~-~~~--~-----------~~~~~~~~~~~~~--~~~~~~~~~L~~~gI~v~~g~~c~~~~~~------ 330 (382)
T TIGR03403 273 DALLELPDVFVV-GDR--E-----------HRVPNTILISIKG--VEGEAMLWDLNKAGIAASTGSACASEDLE------ 330 (382)
T ss_pred HHHhcCCCEEEE-CCC--C-----------CCcCCEEEEEeCC--CCHHHHHHhhccCCEEEEchhccCCCCCC------
Confidence 777766665422 111 0 0113577778853 12334555566668888877655422110
Q ss_pred CCChhhHhhcCCC----CCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 351 SIPKETRDALGIT----DNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 351 ~~~~~~~~~~g~~----~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.....++|.. .+.||+|++.++|+++++.+.++|+++.
T Consensus 331 --~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~ 373 (382)
T TIGR03403 331 --ANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAV 373 (382)
T ss_pred --cCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 11223334432 4789999999999999999999998664
No 172
>PLN02397 aspartate transaminase
Probab=99.95 E-value=2.3e-25 Score=213.72 Aligned_cols=214 Identities=16% Similarity=0.128 Sum_probs=150.2
Q ss_pred CCchHHHHHHHHHHHhCCC-------cE-----EEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc
Q psy12791 57 NNPTRRNLERCIASLEEAK-------HG-----LCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL 123 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~-------~~-----i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~ 123 (393)
+..+..+||+++++++... +. ++.++|+.++ ..+..++.|||+|++++|+|+. |...++..|+
T Consensus 89 ~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~----y~~~~~~~g~ 164 (423)
T PLN02397 89 PIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGN----HHNIFRDAGV 164 (423)
T ss_pred CcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchh----HHHHHHHcCC
Confidence 4568889999999976321 12 3445666665 6666666799999999999984 7788889999
Q ss_pred EEEeeCC-C------CHHHHHhhcC---CCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC
Q psy12791 124 EVDFVDL-R------KIENLIKYIK---PNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK 190 (393)
Q Consensus 124 ~v~~~~~-~------d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~ 190 (393)
+++.+++ + |++.+++.+. ++++++++++||||||.+++ +++|.++|+++ +++||+||+|.++.+..
T Consensus 165 ~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~-~~~vI~De~Y~~l~~~~ 243 (423)
T PLN02397 165 PVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSK-NHLPFFDSAYQGFASGD 243 (423)
T ss_pred eEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEecccCCccCCc
Confidence 9999875 1 6776666654 46788888999999999998 56678888999 99999999999876532
Q ss_pred ------CC---C--CcCcEEEEcccccccCCCCceEEEEE--ecChHHHHHHH----HHHHhcCCCCCHHHHHHHHhccC
Q psy12791 191 ------SL---P--WGVDIVLYSLTKYMNGHSDVVMGATV--TNDDSLQARLK----FLQNSMGVVPSPFDCWLVTRGLK 253 (393)
Q Consensus 191 ------~~---~--~~~di~~~S~sK~~~G~~G~r~G~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 253 (393)
+. . ....++++||||.+ |++|+|+||++ +.++++++.+. ........+.+...+..+...++
T Consensus 244 ~~~~~~~~~~~~~~~~~vI~~~SfSK~~-~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~ 322 (423)
T PLN02397 244 LDADAQSVRMFVEDGHEILVAQSYAKNM-GLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILG 322 (423)
T ss_pred hhhhhHHHHHHHhcCCcEEEEEECcccC-CCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhC
Confidence 11 0 12468999999999 69999999985 44455554332 22222232334444454444443
Q ss_pred C----------HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 254 T----------LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 254 ~----------~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
. +...++...++++.+.+.|+.+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 323 DPELFSEWTKELKGMADRIISMRQKLYDALEAR 355 (423)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3 2233445667777788888765
No 173
>PRK08637 hypothetical protein; Provisional
Probab=99.95 E-value=5.4e-25 Score=209.48 Aligned_cols=219 Identities=15% Similarity=0.143 Sum_probs=146.7
Q ss_pred CccccCCCCchHHHHHHHHHHHhC-----C--C--cEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhc
Q psy12791 50 GFEYSRSNNPTRRNLERCIASLEE-----A--K--HGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVA 118 (393)
Q Consensus 50 ~~~y~~~~~~~~~~lr~~la~~~~-----~--~--~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~ 118 (393)
.+.|+ +..+..+||+++++++. . + ++|++|+|+++ + .++..++++||.|++++|+|+. |...+
T Consensus 37 ~~~Y~--~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~----~~~~~ 110 (388)
T PRK08637 37 IFPYA--PPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGN----YKLTF 110 (388)
T ss_pred ccCCC--CCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCcc----HHHHH
Confidence 34454 34678899999998752 1 2 46899999886 6 6666778999999999999984 55544
Q ss_pred -ccCCcEEEeeCC--C----CHHHHHhhcC----CCCcEEEEecCCCCcccccC---HHHHHHHHHh-----CCCcEEEE
Q psy12791 119 -PKIGLEVDFVDL--R----KIENLIKYIK----PNTKMVWIENPTNPLMTVFD---VKAISAVVKQ-----HPDILLVL 179 (393)
Q Consensus 119 -~~~g~~v~~~~~--~----d~~~l~~~l~----~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~-----~~~~~liv 179 (393)
...|++++.++. + |++++++.++ +.++++++++||||||.+++ +++|+++|++ + +++||+
T Consensus 111 ~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~-~~~iI~ 189 (388)
T PRK08637 111 NTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGT-KVVAVV 189 (388)
T ss_pred HHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCC-cEEEEe
Confidence 457999999887 3 6888888775 34566778999999999998 5566666654 8 999999
Q ss_pred eCccCcccccC----C-CC-----CcCc--EEEEcccccccCCCCceEEEEEec-----ChHHHHHHHHHH----HhcCC
Q psy12791 180 DNTFLTAYYQK----S-LP-----WGVD--IVLYSLTKYMNGHSDVVMGATVTN-----DDSLQARLKFLQ----NSMGV 238 (393)
Q Consensus 180 Dea~~~~~~~~----~-~~-----~~~d--i~~~S~sK~~~G~~G~r~G~~~~~-----~~~~~~~~~~~~----~~~~~ 238 (393)
||+|.++.+.. + .. .+.. ++++|+||.+ +.||+|+||++++ ++++.+.+.... .....
T Consensus 190 De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~-~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 268 (388)
T PRK08637 190 DDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEE-FVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNIS 268 (388)
T ss_pred cccchhcccCCccchhhHHHhhcccccceEEEeccccccC-CCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccC
Confidence 99999865432 1 01 1232 3345999999 6999999999964 267777765321 11122
Q ss_pred CCCHHHHHHHHhccCC--HHHH----HHHHHHHHHHHHHHHhhC
Q psy12791 239 VPSPFDCWLVTRGLKT--LPCR----LKEHERGSIEVAKFLESH 276 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~l~~~l~~~ 276 (393)
..+...+..+...++. +... +....++...+.+.|+..
T Consensus 269 ~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~ 312 (388)
T PRK08637 269 NGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDG 312 (388)
T ss_pred CCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444555555555443 2111 222334444556666543
No 174
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.95 E-value=1.5e-25 Score=213.00 Aligned_cols=300 Identities=17% Similarity=0.132 Sum_probs=197.1
Q ss_pred hHHHHHHHHHHHhCCC-cEEEeccHHH-HH-HHHHHhc---CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--
Q psy12791 60 TRRNLERCIASLEEAK-HGLCYSSGLG-AV-TAVTHLL---SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-- 131 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~-~~i~~~~G~~-al-~~~~~~~---~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-- 131 (393)
..+++|+.+++++|++ +.+++++|++ ++ .++..+. .+||+|+++..+|++....+. .++..|++++.++.+
T Consensus 43 ~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~-~~~~~G~~v~~v~~~~~ 121 (379)
T TIGR03402 43 AVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQ-HLEKQGYKVTYLPVDEE 121 (379)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHH-HHHHcCCEEEEEccCCC
Confidence 4678899999999986 5677776655 56 5555442 457899999999986554443 345579999999864
Q ss_pred ---CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEcccccc
Q psy12791 132 ---KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTKYM 207 (393)
Q Consensus 132 ---d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK~~ 207 (393)
|++++++.++++++++++++++||||.++|+++|.++|+++ |+++++|++++.+.....+ ..++|+++.|.+|++
T Consensus 122 g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~-g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~ 200 (379)
T TIGR03402 122 GRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKER-GALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLH 200 (379)
T ss_pred CcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHc-CCEEEEECcccccccccCcccCCCCEEEEcHHHcC
Confidence 78999999988999999999999999999999999999999 9999999999876543222 257899999999966
Q ss_pred cCCCCceEEEEEecChHHHHHHHHHHH-------hcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhh-
Q psy12791 208 NGHSDVVMGATVTNDDSLQARLKFLQN-------SMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLES- 275 (393)
Q Consensus 208 ~G~~G~r~G~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~- 275 (393)
|++| +|+++.++ ... +..... ...+..+......+...++. +....++..+....+.+.|+.
T Consensus 201 -gp~G--~g~l~v~~-~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 274 (379)
T TIGR03402 201 -GPKG--VGALYIRK-GTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLAR 274 (379)
T ss_pred -CCCc--eEEEEECC-CCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 7999 89988873 321 110000 01112222222212222222 222333444455566666653
Q ss_pred CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChh
Q psy12791 276 HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKE 355 (393)
Q Consensus 276 ~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~ 355 (393)
++.+... -+. . ...++++.|.+++ . ..+.+...|...++.++.|..|+..... +..
T Consensus 275 ~~~~~~~-~~~--~-----------~~~~~~~~~~~~~-~-~~~~~~~~l~~~gI~v~~g~~c~~~~~~--------~~~ 330 (379)
T TIGR03402 275 IPDARLN-GDP--T-----------KRLPNTVNISFEY-I-EGEAILLLLDMEGICASSGSACTSGSLE--------PSH 330 (379)
T ss_pred CCCEEEe-CCC--c-----------cCCCCEEEEEecC-C-CHHHHHHhhccCCEEEEchhhcCCCCCC--------cCH
Confidence 5554321 111 0 0113566666643 1 2345666676668888877665433211 112
Q ss_pred hHhhcCCC----CCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 356 TRDALGIT----DNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 356 ~~~~~g~~----~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
....+|.. .+.||+|++.++++++|+.+.++|+++.
T Consensus 331 ~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~ 370 (379)
T TIGR03402 331 VLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPII 370 (379)
T ss_pred HHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 23334432 5799999999999999999999998764
No 175
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=3.5e-25 Score=208.26 Aligned_cols=284 Identities=17% Similarity=0.150 Sum_probs=196.7
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENL 136 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l 136 (393)
.+...++++.++++++.++.+++++|++++ .++.+++++||+|++++|+|.+ +...++..|++++.++..|.+++
T Consensus 45 ~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~~~~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~l 120 (349)
T cd06454 45 SDLHEELEEELAEFHGKEAALVFSSGYAANDGVLSTLAGKGDLIISDSLNHAS----IIDGIRLSGAKKRIFKHNDMEDL 120 (349)
T ss_pred chHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHHHhcCCCCEEEEehhhhHH----HHHHHHHcCCceEEecCCCHHHH
Confidence 577899999999999998899999999886 6667778999999999999985 34456678999998877777888
Q ss_pred HhhcCC-----CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-C-------C-CCCcCcEEEEc
Q psy12791 137 IKYIKP-----NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ-K-------S-LPWGVDIVLYS 202 (393)
Q Consensus 137 ~~~l~~-----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~-~-------~-~~~~~di~~~S 202 (393)
++.+.+ ++++|++++++||||...|+++|.++|+++ |+++|+|++|+.+... . . ...+.|++++|
T Consensus 121 e~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~-~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s 199 (349)
T cd06454 121 EKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKY-GAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGT 199 (349)
T ss_pred HHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHc-CCEEEEEccccccccCCCCCChhhhccccccCcEEEee
Confidence 887753 478888899999999999999999999999 9999999999754321 1 1 12467899999
Q ss_pred ccccccCCCCceEEEEEecChHHHHHHHHHHHh--cCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCC
Q psy12791 203 LTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS--MGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHP 277 (393)
Q Consensus 203 ~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~ 277 (393)
+||++ |++ +||++.+ +++.+.+...... .+...++.....+...++. ....+++..++.+.+.+.|..+
T Consensus 200 ~sK~~-~~~---gG~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~- 273 (349)
T cd06454 200 LGKAF-GAV---GGYIAGS-KELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL- 273 (349)
T ss_pred chhhh-ccc---CCEEECC-HHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-
Confidence 99999 454 4898887 7777776543322 2233444443333333322 2345566667777777777654
Q ss_pred CcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhH
Q psy12791 278 CVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETR 357 (393)
Q Consensus 278 ~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~ 357 (393)
++..+ .+ ..+.+.++.+. +....+.+.+.|...++.+..++... .
T Consensus 274 g~~~~-~~----------------~~~~~~~~~~~-~~~~~~~~~~~L~~~gI~~~~~~~~~---~-------------- 318 (349)
T cd06454 274 GFPVG-GS----------------PSHIIPPLIGD-DPAKAVAFSDALLERGIYVQAIRYPT---V-------------- 318 (349)
T ss_pred CCccc-CC----------------CCCcEEEEeCC-ChHHHHHHHHHHHhCCceEEEecCCc---c--------------
Confidence 21101 00 01233444442 23345566666554455544321100 0
Q ss_pred hhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 358 DALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 358 ~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
....++||++++..+++++++.+.++|+++
T Consensus 319 ---~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 319 ---PRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ---CCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 011479999999999999999999998765
No 176
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=4.7e-25 Score=214.19 Aligned_cols=285 Identities=18% Similarity=0.165 Sum_probs=199.4
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENL 136 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l 136 (393)
.+...+||+++|+++|.++++++++|..+. .++.+++++||.|++++++|.+ +...++..|++++.++.+|.+++
T Consensus 145 ~~~~~ele~~lA~~~g~~~ai~~~~G~~an~~~i~al~~~Gd~Vi~d~~~h~s----~~~~~~~~Ga~v~~~~~~d~~~l 220 (489)
T PLN02483 145 TKLHRELEELVARFVGKPAAIVFGMGYATNSTIIPALIGKGGLIISDSLNHNS----IVNGARGSGATIRVFQHNTPSHL 220 (489)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCCCCEEEEcchhhHH----HHHHHHHcCCeEEEEeCCCHHHH
Confidence 578899999999999999999999998886 6777889999999999999986 44557888999999998887777
Q ss_pred HhhcC-------CCC-----c-EEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc---------CCCC-
Q psy12791 137 IKYIK-------PNT-----K-MVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ---------KSLP- 193 (393)
Q Consensus 137 ~~~l~-------~~~-----~-~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~---------~~~~- 193 (393)
++.++ +++ + +|+++...|++|.+.++++|.++|+++ ++++|+||+|+.+... ....
T Consensus 221 e~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~-~~~livDEa~s~g~~G~~G~g~~~~~~v~~ 299 (489)
T PLN02483 221 EEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKY-KAYVYLDEAHSIGAVGKTGRGVCELLGVDP 299 (489)
T ss_pred HHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHc-CCEEEEECcCccCccCCCCCchHHhcCCCc
Confidence 66553 222 5 444466779999999999999999999 9999999999854321 1111
Q ss_pred CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh--cCCCCCHHHHHHHHhcc---------CCHHHHHHHH
Q psy12791 194 WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS--MGVVPSPFDCWLVTRGL---------KTLPCRLKEH 262 (393)
Q Consensus 194 ~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 262 (393)
.+.|++++||||++ |+. +||++++ +++++.++..... ++...++.....+...+ +....+++++
T Consensus 300 ~~~dI~~~SfSKs~-g~~---GG~i~~~-~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l 374 (489)
T PLN02483 300 ADVDIMMGTFTKSF-GSC---GGYIAGS-KELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQI 374 (489)
T ss_pred ccCcEEEEecchhc-ccC---ceEEEcC-HHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHH
Confidence 35789999999999 565 4999987 8888888754321 23333333322222222 1233456777
Q ss_pred HHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCcccccc
Q psy12791 263 ERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLAD 342 (393)
Q Consensus 263 ~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~ 342 (393)
.++.+.+.+.|+++ ++. +..+. .+.++++.+ ........+.+.+...++.+...+.. .
T Consensus 375 ~~~~~~l~~~L~~~-G~~-v~~~~----------------~sp~~~l~l-~~~~~~~~~~~~Ll~~GI~v~~~~fp---~ 432 (489)
T PLN02483 375 RENSNFFRSELQKM-GFE-VLGDN----------------DSPVMPIML-YNPAKIPAFSRECLKQNVAVVVVGFP---A 432 (489)
T ss_pred HHHHHHHHHHHHHC-CCc-ccCCC----------------CCCEEEEEE-CCHHHHHHHHHHHHHCCcEEeeeCCC---C
Confidence 78888888888865 221 11111 135667766 34445556666654445554421110 0
Q ss_pred CcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 343 LPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+ ...+.+|++++..+++++++.+.++|+++.
T Consensus 433 ~p-----------------~~~~~vRi~isa~~t~edId~~l~~L~~~~ 464 (489)
T PLN02483 433 TP-----------------LLLARARICISASHSREDLIKALEVISEVG 464 (489)
T ss_pred CC-----------------CCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 00 114789999999999998888888887654
No 177
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=6.8e-25 Score=207.05 Aligned_cols=215 Identities=16% Similarity=0.161 Sum_probs=155.9
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHH-HH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLG-AV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~-al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
.+|...++++++|+++|. +.+++++|++ ++ .++..++++||+|+++.++|.+.+ ..++..|++++.++.+
T Consensus 42 ~~~~~~~l~~~la~~~g~-~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~ 116 (361)
T cd06452 42 EKPPIKDFHHDLAEFLGM-DEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSY----VAAERAGLNVREVPNTGHP 116 (361)
T ss_pred cCchHHHHHHHHHHHcCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHH----HHHHhcCCEEEEEecCCCC
Confidence 357789999999999999 5556666655 57 677778899999999999987643 3467889999988753
Q ss_pred ----CHHHHHhhcC-------CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-CCCCCcCcEE
Q psy12791 132 ----KIENLIKYIK-------PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ-KSLPWGVDIV 199 (393)
Q Consensus 132 ----d~~~l~~~l~-------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~-~~~~~~~di~ 199 (393)
|+++++++++ +++++|++++|+||||.+.|+++|.++|+++ |+++|+|++|+.+... .....++|++
T Consensus 117 ~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~-~~~vivD~a~~~g~~~~~~~~~~~d~~ 195 (361)
T cd06452 117 EYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEY-GVPLLLNGAYTVGRMPVSGKELGADFI 195 (361)
T ss_pred CcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHc-CCeEEEECCcccCCcCCCHHHcCCCEE
Confidence 6788888775 3689999999999999999999999999999 9999999999865432 2223578999
Q ss_pred EEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc--------CCCCCHHHHHHHHhccCCHH---HHHHHHHHHHHH
Q psy12791 200 LYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM--------GVVPSPFDCWLVTRGLKTLP---CRLKEHERGSIE 268 (393)
Q Consensus 200 ~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 268 (393)
++|+||+++ .++ |+||++++ ++++++++.....+ +..........+...++... .+..+..+++++
T Consensus 196 ~~s~~K~l~-~~~-~~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~ 272 (361)
T cd06452 196 VGSGHKSMA-ASA-PIGVLATT-EEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARW 272 (361)
T ss_pred EecCCcccc-CCC-CeEEEEEC-HHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999994 444 89999997 78888775543221 11111111222222222222 233334455678
Q ss_pred HHHHHhhCCCcc
Q psy12791 269 VAKFLESHPCVK 280 (393)
Q Consensus 269 l~~~l~~~~~~~ 280 (393)
+.+.|+++++++
T Consensus 273 l~~~L~~l~g~~ 284 (361)
T cd06452 273 FVAELEKIEGIK 284 (361)
T ss_pred HHHHHhcCCCeE
Confidence 888888877654
No 178
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.94 E-value=2.9e-25 Score=212.39 Aligned_cols=300 Identities=19% Similarity=0.185 Sum_probs=193.2
Q ss_pred chHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHh----cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 59 PTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHL----LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~----~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
...+++|+.+|+++|.+ +++++++|+++ + .++..+ .++||+|+++.++|++....+. .++..|++++.++.+
T Consensus 47 ~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~-~~~~~g~~v~~v~~~ 125 (402)
T TIGR02006 47 EAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCR-YLEREGFEVTYLPPK 125 (402)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHH-HHHhcCCEEEEEccC
Confidence 45678899999999986 57788777665 6 444433 3689999999999987654443 345679999998874
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEcccc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTK 205 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK 205 (393)
|++++++.+.+++++|++++++||||.+.|+++|.++|+++ |+++++|++++.+...... ..+.|+++.|++|
T Consensus 126 ~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~-g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K 204 (402)
T TIGR02006 126 SNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRER-KVFFHVDAAQSVGKIPINVNELKVDLMSISGHK 204 (402)
T ss_pred CCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHc-CCEEEEEcchhcCCcccCccccCCCEEEEehhh
Confidence 78999999988899999999999999999999999999999 9999999999876543222 2578999999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHH-------hcCCCCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHh
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQN-------SMGVVPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFLE 274 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~ 274 (393)
++ |++| +|+++.+++. ...+..... ...+.........+...++ .+..+.++..+....+.+.|+
T Consensus 205 ~~-gp~G--~G~l~~~~~~-~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~ 280 (402)
T TIGR02006 205 IY-GPKG--IGALYVRRKP-RVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIK 280 (402)
T ss_pred hc-CCCc--eEEEEEccCC-CCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh
Confidence 87 7888 8888887332 222221111 0111222222222222222 233333444455566666666
Q ss_pred hCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCC
Q psy12791 275 SHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIP 353 (393)
Q Consensus 275 ~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~ 353 (393)
.++.+... .+. . ......+.|.+.+ +. +.+...++ ++.++.|..++..... +
T Consensus 281 ~~~~v~~~-~~~-~------------~~~p~~~~v~f~~~~~---~~~~~~l~--~i~v~~G~~c~~~~~~--------~ 333 (402)
T TIGR02006 281 SIEEVYLN-GDL-E------------HRVPGNLNVSFNYVEG---ESLIMALK--DLAVSSGSACTSASLE--------P 333 (402)
T ss_pred cCCCEEEe-CCc-c------------ccCCCeEEEEEeCcCH---HHHHHhcC--CEEEechhhcCCCCCC--------c
Confidence 66654311 110 0 0012232344432 22 23344443 4555555443321110 1
Q ss_pred hhhHhhcCCC----CCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 354 KETRDALGIT----DNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 354 ~~~~~~~g~~----~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.....++|.. .++||+|++.++|+++++.+.++|+++.
T Consensus 334 ~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~ 375 (402)
T TIGR02006 334 SYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAI 375 (402)
T ss_pred cHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 1222234443 5899999999999999999999998764
No 179
>PLN02651 cysteine desulfurase
Probab=99.94 E-value=1.5e-25 Score=211.59 Aligned_cols=293 Identities=19% Similarity=0.192 Sum_probs=191.9
Q ss_pred chHHHHHHHHHHHhCCC-cEEEeccHHH-HH-HHHHH----hcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 59 PTRRNLERCIASLEEAK-HGLCYSSGLG-AV-TAVTH----LLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~-~~i~~~~G~~-al-~~~~~----~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
...+++|+.+++++|.+ +++++++|++ ++ .++.. +.++||+|++++.+|++....+.. ++..|++++.++.+
T Consensus 43 ~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~-~~~~g~~v~~v~~~ 121 (364)
T PLN02651 43 DAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRH-LQQEGFEVTYLPVK 121 (364)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHH-HHhcCCEEEEEccC
Confidence 44678999999999986 5777777665 45 44433 247899999999999875544443 34679999888764
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEcccc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTK 205 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK 205 (393)
|++++++.+++++++|++++++|+||.+.|+++|.++|+++ |+++++|++++.+.....+ ..++|+++.|.+|
T Consensus 122 ~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~-g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK 200 (364)
T PLN02651 122 SDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREK-KVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHK 200 (364)
T ss_pred CCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHc-CCEEEEEcchhhCCcccCcccCCCCEEEechhh
Confidence 78999999998999999999999999999999999999999 9999999999976543222 3579999999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHH-------hcCCCCCHHHHHHHHhccCCHH----HHHHHHHHHHHHHHHHHh
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQN-------SMGVVPSPFDCWLVTRGLKTLP----CRLKEHERGSIEVAKFLE 274 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~l~ 274 (393)
|+ |++| +|+++.+ ++..+.+..... ...++.+......+..+++.+. ...++..+...++.+.|+
T Consensus 201 ~~-gp~G--~g~l~v~-~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~ 276 (364)
T PLN02651 201 IY-GPKG--VGALYVR-RRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLR 276 (364)
T ss_pred hC-CCCc--eEEEEEc-CCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 86 7988 9999987 443333321111 0112222222222233333222 223333444555566665
Q ss_pred h-CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCC
Q psy12791 275 S-HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIP 353 (393)
Q Consensus 275 ~-~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~ 353 (393)
+ .+++. +..|.-+. ....+++.|.+++ ...+.+...|.. +.++.|..|+..... +
T Consensus 277 ~~~~~~~-i~~~~~~~-----------~~~~~i~~~~~~~--~~~~~~~~~L~~--i~v~~g~~c~~~~~~--------~ 332 (364)
T PLN02651 277 AKLGGVR-VNGPRDPE-----------KRYPGTLNLSFAY--VEGESLLMGLKE--VAVSSGSACTSASLE--------P 332 (364)
T ss_pred hhCCCEE-EECCCCcc-----------cCcCCEEEEEeCC--CCHHHHHHHhCC--EEEEchhhcCCCCCC--------c
Confidence 3 45543 22221000 1124688888854 123345555544 777777665433211 1
Q ss_pred hhhHhhcCCC----CCeEEEEecCCChHHHHH
Q psy12791 354 KETRDALGIT----DNLVRLSVGVEGYTDLIA 381 (393)
Q Consensus 354 ~~~~~~~g~~----~~~iRls~~~~~~~~~i~ 381 (393)
......+|.. .+.||+|++.+||+++|+
T Consensus 333 ~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 333 SYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred CHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 2233334443 489999999999998874
No 180
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.94 E-value=2.4e-25 Score=214.53 Aligned_cols=185 Identities=20% Similarity=0.240 Sum_probs=130.8
Q ss_pred CCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHH-HHhC-------CC-c--EEEeccHHHH-H-HHHHH-----
Q psy12791 31 PPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIA-SLEE-------AK-H--GLCYSSGLGA-V-TAVTH----- 92 (393)
Q Consensus 31 ~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la-~~~~-------~~-~--~i~~~~G~~a-l-~~~~~----- 92 (393)
.|-.+++.+..++.+.... ..|. +..+...++++++ +++. .+ + +|++|+|+++ + .++.+
T Consensus 103 ~p~~~~~~~~~~~~~~~~~-~~Y~--~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ 179 (521)
T TIGR03801 103 QLGFDPDAFLYEMCDGIIG-DNYP--VPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANE 179 (521)
T ss_pred CCCCCCCHHHHHHHHHhhc-CCCC--CCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhh
Confidence 3444455666655444221 2232 1234445555554 4432 12 3 7999999886 6 55544
Q ss_pred hcCCCCeEEEcCCCccchHHHHHHhccc--CCcEEEeeCCC------------CHHHHHhhcCCCCcEEEEecCCCCccc
Q psy12791 93 LLSAGDHIISGDDVYGGTYRYFAQVAPK--IGLEVDFVDLR------------KIENLIKYIKPNTKMVWIENPTNPLMT 158 (393)
Q Consensus 93 ~~~~gd~vl~~~~~y~~~~~~~~~~~~~--~g~~v~~~~~~------------d~~~l~~~l~~~~~~v~l~~p~nptG~ 158 (393)
++.|||+|++++|+|+. |...++. .|++++.++.+ |.+++++++++++|+|++++||||||.
T Consensus 180 ll~pGD~Vlv~~P~y~~----y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~ 255 (521)
T TIGR03801 180 LLKKGDKIALMTPIFTP----YLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSV 255 (521)
T ss_pred cCCCCCEEEEeCCCcHH----HHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCC
Confidence 68999999999999984 5555444 47787777642 457888888888999999999999999
Q ss_pred ccC---HHHHHHHHHhC-CCcEEEEeCccCccccc-CCC-C--CcCcEEEEcccccccCCCCceEEEEEecCh
Q psy12791 159 VFD---VKAISAVVKQH-PDILLVLDNTFLTAYYQ-KSL-P--WGVDIVLYSLTKYMNGHSDVVMGATVTNDD 223 (393)
Q Consensus 159 ~~~---~~~l~~l~~~~-~~~~livDea~~~~~~~-~~~-~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~ 223 (393)
+++ +++|.++|+++ ++++||+||+|..+... .++ . ..+.+++.||||.+ |++|+|+||++++++
T Consensus 256 vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~f-g~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 256 AMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYF-GATGWRLGTIALHKD 327 (521)
T ss_pred CCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhc-cCchhhhhhhhcCch
Confidence 999 66677778875 48999999999976532 111 1 23679999999999 799999999999854
No 181
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.94 E-value=1.2e-24 Score=208.29 Aligned_cols=284 Identities=14% Similarity=0.080 Sum_probs=195.1
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLI 137 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~ 137 (393)
+..+++++.+++++|.++.+++++|++++ .++..++++||+|++++|+|++ +...++..|.+++.++..|+++++
T Consensus 87 ~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~----~~~~~~~~~~~~~~~~~~d~~~l~ 162 (397)
T PRK06939 87 DLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHAS----IIDGVRLCKAKRYRYANNDMADLE 162 (397)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHH----HHHHHHhcCCceEEeCCCCHHHHH
Confidence 45678999999999988999999998887 6677788999999999999985 444566778888888877888888
Q ss_pred hhcCC------CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC---------CCCCcCcEEEEc
Q psy12791 138 KYIKP------NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK---------SLPWGVDIVLYS 202 (393)
Q Consensus 138 ~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~---------~~~~~~di~~~S 202 (393)
+.+.+ ++++|++.+.+|++|...++++|.++|+++ +++||+||+|..+.... .+..+.|++++|
T Consensus 163 ~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~-~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S 241 (397)
T PRK06939 163 AQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKY-DALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGT 241 (397)
T ss_pred HHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHh-CCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEE
Confidence 77753 678888888999999999999999999999 99999999996433211 111246899999
Q ss_pred ccccccCCCCceEEEEEecChHHHHHHHHHHH--hcCCCCCHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHhhCC
Q psy12791 203 LTKYMNGHSDVVMGATVTNDDSLQARLKFLQN--SMGVVPSPFDCWLVTRGL---KTLPCRLKEHERGSIEVAKFLESHP 277 (393)
Q Consensus 203 ~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~ 277 (393)
+||+++| .|+||++++ +++++.++.... .+++...+..+..+...+ +.....+++..++.+.+.+.|+...
T Consensus 242 ~sK~~~g---~r~G~v~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 317 (397)
T PRK06939 242 LGKALGG---ASGGYTAGR-KEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAAG 317 (397)
T ss_pred CHHHhCc---cCceEEEeC-HHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999943 379999987 788887765432 123333343333222222 2223445666677777778777542
Q ss_pred CcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhH
Q psy12791 278 CVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETR 357 (393)
Q Consensus 278 ~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~ 357 (393)
+. . .+ +.++++.+.+. +......|.+.+...++.+.. +.+...
T Consensus 318 -~~-~-~~----------------~~~~~~~~~~~-~~~~~~~~~~~L~~~gI~v~~-~~~~~~---------------- 360 (397)
T PRK06939 318 -FT-L-GP----------------GEHPIIPVMLG-DAKLAQEFADRLLEEGVYVIG-FSFPVV---------------- 360 (397)
T ss_pred -CC-c-CC----------------CCCCEEEEEEC-CHHHHHHHHHHHHHCCceEee-eCCCCC----------------
Confidence 11 1 01 12356655563 333455666666544555442 111000
Q ss_pred hhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 358 DALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 358 ~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+...++||++++..+++++++.+.+.|+++.
T Consensus 361 ---~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~ 391 (397)
T PRK06939 361 ---PKGQARIRTQMSAAHTKEQLDRAIDAFEKVG 391 (397)
T ss_pred ---CCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 0114689999999888888888888887653
No 182
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.94 E-value=2.9e-24 Score=203.85 Aligned_cols=300 Identities=17% Similarity=0.183 Sum_probs=200.3
Q ss_pred ccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 53 YSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 53 y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
|++. ....+|++++|+++|.++++++++|+++. .++.+++++||+|+++++.|.++.. .+...+.+++.++..
T Consensus 39 yg~~--~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~l~~~GD~Vl~~~~~h~s~~~----~~~l~~~~~~~~~~~ 112 (392)
T PLN03227 39 YGTI--DAHLELEQCMAEFLGTESAILYSDGASTTSSTVAAFAKRGDLLVVDRGVNEALLV----GVSLSRANVRWFRHN 112 (392)
T ss_pred cCCh--HHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHhCCCCCEEEEeccccHHHHH----HHHHcCCeEEEeCCC
Confidence 5554 47889999999999999999999999996 7788899999999999999987433 234456788888877
Q ss_pred CHHHHHh---hcC-----------CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC-------
Q psy12791 132 KIENLIK---YIK-----------PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK------- 190 (393)
Q Consensus 132 d~~~l~~---~l~-----------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~------- 190 (393)
|.+++++ .+. +++++|++++++||+|.+.|+++|.++|+++ |+++|+||+|+.+....
T Consensus 113 d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~-g~~livDe~~~~g~~g~~G~g~~~ 191 (392)
T PLN03227 113 DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEF-HYRLILDESFSFGTLGKSGRGSLE 191 (392)
T ss_pred CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHc-CCEEEEECcccccccCCCCCcHHH
Confidence 6655444 332 2578999999999999999999999999999 99999999998543211
Q ss_pred ----CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH--HhcCCCCCHHHHHHHHhcc---CCHHHHHHH
Q psy12791 191 ----SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ--NSMGVVPSPFDCWLVTRGL---KTLPCRLKE 261 (393)
Q Consensus 191 ----~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 261 (393)
....++|+++.|+||++ |+ ++|+++++ +++++.++... ..+++..+|..++.+...+ ...+.++++
T Consensus 192 ~~g~~p~~~~Div~~slsk~~-g~---~gg~v~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~ 266 (392)
T PLN03227 192 HAGLKPMVHAEIVTFSLENAF-GS---VGGMTVGS-EEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNR 266 (392)
T ss_pred HcCCCCCCCceEEEeechhhh-hc---cCcEEecC-HHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHH
Confidence 11236799999999998 54 46888876 77776665322 2345544565544443332 223356777
Q ss_pred HHHHHHHHHHHHhh--CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHH---------HHHHHHhcCcccc
Q psy12791 262 HERGSIEVAKFLES--HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEE---------TRIFLESLLIFRC 330 (393)
Q Consensus 262 ~~~~~~~l~~~l~~--~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~~~ 330 (393)
..++.+++.+.|+. ++.+..+.- ++. . .....+.++.|.+. +... ...+.+.+...++
T Consensus 267 l~~~~~~l~~~L~~~~~~~~~~~rg-~~~--------~-~~~~~~~i~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~Gi 335 (392)
T PLN03227 267 LHDSIANLYSTLTNSSHPYALKLRN-RLV--------I-TSDPISPIIYLRLS-DQEATRRTDETLILDQIAHHSLSEGV 335 (392)
T ss_pred HHHHHHHHHHHHHhcCCcccccccc-ccc--------c-CCCCCCCEEEEEeC-CHHHhhhhhhhhHHHHHHHHHHHCCC
Confidence 77888888888864 121111110 000 0 00123578888884 3222 2355555544343
Q ss_pred ccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 331 AESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 331 ~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+...+.......+ -.++..||++++..+++++++.+.++|+++.
T Consensus 336 ~~~~~~~~~~~~~~----------------~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~ 380 (392)
T PLN03227 336 AVVSTGGHVKKFLQ----------------LVPPPCLRVVANASHTREDIDKLLTVLGEAV 380 (392)
T ss_pred EEEecccccCCcCC----------------CCCCceEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 33211111100001 1236789999999999999999998888664
No 183
>PLN02822 serine palmitoyltransferase
Probab=99.94 E-value=2.6e-24 Score=208.67 Aligned_cols=289 Identities=13% Similarity=0.130 Sum_probs=201.3
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENL 136 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l 136 (393)
.+...+|+++||++++.++++++++|.+++ .++.+++++||.|++....|.+ +...++..+.+++.++.+|.+++
T Consensus 153 ~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~sai~a~~~~gd~Ii~d~~~H~s----~~~~~~ls~~~~~~~~~nd~~~l 228 (481)
T PLN02822 153 IDVHLDCETKIAKFLGTPDSILYSYGLSTIFSVIPAFCKKGDIIVADEGVHWG----IQNGLYLSRSTIVYFKHNDMESL 228 (481)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCHHHHHHHHHHHhCCCCCEEEEeCCccHH----HHHHHHHcCCeEEEECCCCHHHH
Confidence 467899999999999999999999998887 7888899999999987776653 34455667889999998877666
Q ss_pred HhhcC---------CCC-cEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC---------CCC-CcC
Q psy12791 137 IKYIK---------PNT-KMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK---------SLP-WGV 196 (393)
Q Consensus 137 ~~~l~---------~~~-~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~---------~~~-~~~ 196 (393)
+..+. +++ ++|+++.++|++|.+.|+++|.++|++| ++++|+||+|+.+.+.. .+. ...
T Consensus 229 ~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~-~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~ 307 (481)
T PLN02822 229 RNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKY-RFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKI 307 (481)
T ss_pred HHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHc-CCEEEEECCccccccCCCCCChHHHcCCCCCCC
Confidence 65542 234 6899999999999999999999999999 99999999999655321 111 246
Q ss_pred cEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH--hcCCCCCHHHHHHHHhccC---CHHHHHHHHHHHHHHHHH
Q psy12791 197 DIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN--SMGVVPSPFDCWLVTRGLK---TLPCRLKEHERGSIEVAK 271 (393)
Q Consensus 197 di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~ 271 (393)
|+++.||+|.+ |..| ||++++ +++++.++.... .+++..++..+..+...++ .....++++.++.+.+.+
T Consensus 308 dii~~s~sKal-g~~G---G~i~g~-~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~ 382 (481)
T PLN02822 308 DIITAAMGHAL-ATEG---GFCTGS-ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHK 382 (481)
T ss_pred eEEEecchhhh-hhCC---eEEEcC-HHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 89999999999 5665 999987 788887664332 2333334444444333332 224466777788888888
Q ss_pred HHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-------HHHHHHHHHhcC-ccccccccCCccccccC
Q psy12791 272 FLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-------AEETRIFLESLL-IFRCAESLGGIESLADL 343 (393)
Q Consensus 272 ~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~ 343 (393)
.|++.+++. +..+ ..+.++.+.+++. ....+.+.+.+- ..++.+..+.... ...
T Consensus 383 ~L~~~~g~~-~~~~----------------~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~-~~~ 444 (481)
T PLN02822 383 GLSDIPGLS-IGSN----------------TLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRST-LDK 444 (481)
T ss_pred HHHhcCCcc-cCCC----------------CCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCC-cCC
Confidence 887654432 1111 1256777887421 122455666653 4455544332100 000
Q ss_pred cccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 344 PAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+..+..+|++++..+++++++.+.++|+++.
T Consensus 445 -----------------~~~~~~lRi~is~~~t~edI~~~~~~l~~~~ 475 (481)
T PLN02822 445 -----------------CRLPVGIRLFVSAGHTESDILKASESLKRVA 475 (481)
T ss_pred -----------------CCCCCcEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 0113579999999999999999999987654
No 184
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.93 E-value=1e-23 Score=200.99 Aligned_cols=284 Identities=13% Similarity=0.077 Sum_probs=192.4
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENL 136 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l 136 (393)
.+...++++.+++++|.++.+++++|++++ .++..++++||.|++++|+|++. ...++..|+++..++..|++++
T Consensus 77 ~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~~~~~~gd~vi~~~~~~~~~----~~~~~~~g~~~~~~~~~d~~~l 152 (385)
T TIGR01825 77 LRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDIVLSDELNHASI----IDGLRLTKATKKIYKHADMDDL 152 (385)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHhCCCCCEEEEEccccHHH----HHHHHhcCCceEEeCCCCHHHH
Confidence 345788888899888988889999998886 67777889999999999999853 3344567888877776678777
Q ss_pred HhhcC----CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc---------CCCCCcCcEEEEcc
Q psy12791 137 IKYIK----PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ---------KSLPWGVDIVLYSL 203 (393)
Q Consensus 137 ~~~l~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~---------~~~~~~~di~~~S~ 203 (393)
++.+. +++++|++++++||||.+.|+++|.++|+++ |+++|+||+|+.+... .....+.++++.|+
T Consensus 153 ~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 231 (385)
T TIGR01825 153 DRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERY-GAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTL 231 (385)
T ss_pred HHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHh-CCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEec
Confidence 77664 3688999999999999999999999999999 9999999999865432 11224678999999
Q ss_pred cccccCCCCceEEEEEecChHHHHHHHHHHH--hcCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCC
Q psy12791 204 TKYMNGHSDVVMGATVTNDDSLQARLKFLQN--SMGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPC 278 (393)
Q Consensus 204 sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~ 278 (393)
||++ |.+ +||++++ +++++.+..... ..++...+..+..+...++. .....++..++.+.+.+.|+.. +
T Consensus 232 sK~~-~~~---gG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 305 (385)
T TIGR01825 232 SKAI-GVV---GGYAAGH-KELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL-G 305 (385)
T ss_pred cHHh-hcC---CCEEecC-HHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-C
Confidence 9999 454 4999886 788887765432 22333334433333333322 1234455556667777777653 2
Q ss_pred cceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHh
Q psy12791 279 VKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRD 358 (393)
Q Consensus 279 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~ 358 (393)
+. +..+ .++++.+.+ +.......+.+.+...++.+..++..+.
T Consensus 306 ~~-~~~~-----------------~~~~~~~~~-~~~~~~~~~~~~L~~~gi~v~~~~~~~~------------------ 348 (385)
T TIGR01825 306 YD-TGGS-----------------ETPITPVVI-GDEKAAQEFSRRLFDEGIFAQSIVFPTV------------------ 348 (385)
T ss_pred CC-CCCC-----------------CCCEEEEEE-CCHHHHHHHHHHHHHCCcEEcccCCCCC------------------
Confidence 21 1111 134566666 3333445565555433444322111000
Q ss_pred hcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 359 ALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 359 ~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
......||++++...++++++.+.++++++.
T Consensus 349 --~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~ 379 (385)
T TIGR01825 349 --PRGTARIRNIPTAEHTKDDLDQALDAYEKVG 379 (385)
T ss_pred --CCCCceEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 0124789999999999998888888887653
No 185
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.93 E-value=6.8e-24 Score=201.71 Aligned_cols=220 Identities=14% Similarity=0.125 Sum_probs=161.7
Q ss_pred ccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC-
Q psy12791 53 YSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL- 130 (393)
Q Consensus 53 y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~- 130 (393)
+.+...+...++|+.+|+++|.++.+++++|+.++ .++.+++++||+|+++.++|.+.+ ..++..|++++.++.
T Consensus 57 ~~~~~~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~----~~~~~~G~~~~~v~~~ 132 (387)
T PRK09331 57 LDQIKKPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSY----VAAERAGLNVREVPKT 132 (387)
T ss_pred cccccChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHH----HHHHHcCCEEEEEeCc
Confidence 33334567899999999999998777766666677 777888899999999999988643 235778999999987
Q ss_pred -C-----CHHHHHhhcC-------CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC-CCCcC
Q psy12791 131 -R-----KIENLIKYIK-------PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS-LPWGV 196 (393)
Q Consensus 131 -~-----d~~~l~~~l~-------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~-~~~~~ 196 (393)
+ |++++++.+. +++++|++++|+|+||.+.|+++|.++|+++ |+++++|++|+.+..... ...++
T Consensus 133 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~-g~~livD~a~~~g~~~~~~~~~g~ 211 (387)
T PRK09331 133 GYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEY-GIPFLLNGAYTVGRMPVDGKKLGA 211 (387)
T ss_pred cCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHc-CCEEEEECCcccCCcCCCHHHcCC
Confidence 2 6888888875 2689999999999999999999999999999 999999999997643222 23578
Q ss_pred cEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh--------cCCCCCHHHHHHHHhccC---CHHHHHHHHHHH
Q psy12791 197 DIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS--------MGVVPSPFDCWLVTRGLK---TLPCRLKEHERG 265 (393)
Q Consensus 197 di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 265 (393)
|+++.|+||++++++ ++||++++ +++++.+...... ++....+.....+...++ ....++++..++
T Consensus 212 D~~~~s~~K~l~~~~--~~G~l~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~ 288 (387)
T PRK09331 212 DFIVGSGHKSMAASA--PSGVLATT-EEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKK 288 (387)
T ss_pred CEEEeeCcccccCCC--CEEEEEEC-HHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999996444 59999997 7777766443211 122222111221222222 222345556677
Q ss_pred HHHHHHHHhhCCCcc
Q psy12791 266 SIEVAKFLESHPCVK 280 (393)
Q Consensus 266 ~~~l~~~l~~~~~~~ 280 (393)
++++.+.|+++++++
T Consensus 289 ~~~l~~~L~~l~g~~ 303 (387)
T PRK09331 289 ARWFVDELEKIEGFK 303 (387)
T ss_pred HHHHHHHHhcCCCEE
Confidence 788888898877654
No 186
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.93 E-value=9.3e-24 Score=202.13 Aligned_cols=284 Identities=18% Similarity=0.192 Sum_probs=192.4
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcC--CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLS--AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIE 134 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~--~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~ 134 (393)
.+...+|++++|+++|.++++++++|++++ .++..+.. +++.|+.....|.+ ....++..|+++..++..|++
T Consensus 89 ~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s----~~~~~~~~g~~~~~~~~~d~~ 164 (402)
T TIGR01821 89 NIPHVELEAELADLHGKESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHAS----MIEGIRHSGAEKFIFRHNDVA 164 (402)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHH----HHHHHHHcCCeEEEECCCCHH
Confidence 467889999999999988899999999986 55555543 67766666555654 223345678888777777777
Q ss_pred HHHhhcC---C-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC---------CCCCcCcEEEE
Q psy12791 135 NLIKYIK---P-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK---------SLPWGVDIVLY 201 (393)
Q Consensus 135 ~l~~~l~---~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~---------~~~~~~di~~~ 201 (393)
++++.++ + ++++|++++|+||+|.+.|+++|.++|+++ ++++|+||+|+.+.+.. ......|++++
T Consensus 165 ~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~-~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~ 243 (402)
T TIGR01821 165 HLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLADKY-GALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEG 243 (402)
T ss_pred HHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHc-CCEEEEeCcccccccCCCCCccchhccCCCCCeEEEE
Confidence 7777664 2 578999999999999999999999999999 99999999998543211 01123589999
Q ss_pred cccccccCCCCceEEEEEecChHHHHHHHHHHHh--cCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 202 SLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS--MGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 202 S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
||||.+ |.+| ||++++ +++++.++..... +....++..+..+...++. .....++..++...+.+.|+.+
T Consensus 244 t~sKa~-g~~G---G~i~~~-~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (402)
T TIGR01821 244 TLAKAF-GVVG---GYIAAS-RKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL 318 (402)
T ss_pred echhhh-ccCC---ceeecC-HHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999 5654 898886 7888877644332 2333455555544444432 2333445556777778878754
Q ss_pred CCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChh
Q psy12791 277 PCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKE 355 (393)
Q Consensus 277 ~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~ 355 (393)
++. + .+. .++++.+.+ ++......+.+.+. ..++.+..... |. .
T Consensus 319 -g~~-~-~~~----------------~~~i~~i~~-~~~~~a~~~~~~L~~~~Gi~v~~~~~------p~------~--- 363 (402)
T TIGR01821 319 -GIP-V-IPN----------------PSHIVPVII-GDAALCKKVSDLLLNKHGIYVQPINY------PT------V--- 363 (402)
T ss_pred -CCC-c-CCC----------------CCCEEEEEe-CCHHHHHHHHHHHHhcCCEEEEeECC------CC------C---
Confidence 221 1 111 246777777 44445556666653 32443332111 10 0
Q ss_pred hHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 356 TRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 356 ~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.....+||+|++..+++++++.+.++|+++.
T Consensus 364 -----~~g~~~lRis~~~~~t~edi~~~~~~l~~~~ 394 (402)
T TIGR01821 364 -----PRGTERLRITPTPAHTDKMIDDLVEALLLVW 394 (402)
T ss_pred -----CCCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 0113689999999999999999999998764
No 187
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.93 E-value=8.5e-24 Score=202.79 Aligned_cols=285 Identities=16% Similarity=0.177 Sum_probs=192.7
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcC--CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCH
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLS--AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKI 133 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~--~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~ 133 (393)
+++...+|+++||+++|.++++++++|+++. .++..+.. +++.|+.....|.+. ...++..+.++..++..|+
T Consensus 89 ~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~----~~~~~~~~~~~~~~~~~d~ 164 (407)
T PRK09064 89 TNHYHVELERELADLHGKEAALVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASM----IEGIRRSRCEKHIFRHNDV 164 (407)
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHH----HHHHHHcCCcEEEECCCCH
Confidence 4678899999999999988899999999885 55554443 676666665556542 2234556778877887788
Q ss_pred HHHHhhcC----CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-C--------CCCCcCcEEE
Q psy12791 134 ENLIKYIK----PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ-K--------SLPWGVDIVL 200 (393)
Q Consensus 134 ~~l~~~l~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~-~--------~~~~~~di~~ 200 (393)
+++++.++ +++++|++++++||+|.+.|+++|.++|+++ |+++|+||+|+.+.+. . ......|+++
T Consensus 165 ~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~-~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~ 243 (407)
T PRK09064 165 AHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADKY-NALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIE 243 (407)
T ss_pred HHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHHc-CCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEE
Confidence 88877775 4689999999999999999999999999999 9999999999854321 1 1112358999
Q ss_pred EcccccccCCCCceEEEEEecChHHHHHHHHHHHhc--CCCCCHHHHHHHHhccCCH---HHHHHHHHHHHHHHHHHHhh
Q psy12791 201 YSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM--GVVPSPFDCWLVTRGLKTL---PCRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 201 ~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~ 275 (393)
+||||.+ |++| ||++++ +++++.++.....+ ....++..+..+...++.+ ...+++..++.+.+.+.|++
T Consensus 244 ~t~sKa~-g~~G---G~~~~~-~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~ 318 (407)
T PRK09064 244 GTLAKAF-GVMG---GYIAGS-AALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDA 318 (407)
T ss_pred Eecchhh-hccC---ceEecC-HHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 5665 898887 78888776543322 2334454444444444332 22356666777788888875
Q ss_pred CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCCh
Q psy12791 276 HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPK 354 (393)
Q Consensus 276 ~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~ 354 (393)
. ++. + .+ ..++++.+.+ ++......+.+.+. ..++.+.... .|. .
T Consensus 319 ~-g~~-~-~~----------------~~~~iv~i~~-~~~~~~~~l~~~L~~~~gi~v~~~~------~p~------~-- 364 (407)
T PRK09064 319 A-GIP-V-MP----------------NESHIVPVMV-GDPEKCKKASDMLLEEHGIYVQPIN------YPT------V-- 364 (407)
T ss_pred c-CCC-C-CC----------------CCCCEEEEEe-CCHHHHHHHHHHHHHhCCEEEeeEC------CCC------C--
Confidence 3 111 1 11 1246777777 44444555665542 2244333211 010 0
Q ss_pred hhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 355 ETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 355 ~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.....++|+|++..+++++++.+.++|+++.
T Consensus 365 ------~~~~~~lRis~~~~~t~edi~~l~~~l~~~~ 395 (407)
T PRK09064 365 ------PRGTERLRITPTPFHTDEMIDHLVEALVEVW 395 (407)
T ss_pred ------CCCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 0013689999999999999999999998764
No 188
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.93 E-value=8.1e-24 Score=199.51 Aligned_cols=311 Identities=15% Similarity=0.157 Sum_probs=201.3
Q ss_pred CCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCc---EE-EeccHHHHH-HHHHHhcCCCCeEEEcCC
Q psy12791 31 PPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKH---GL-CYSSGLGAV-TAVTHLLSAGDHIISGDD 105 (393)
Q Consensus 31 ~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~---~i-~~~~G~~al-~~~~~~~~~gd~vl~~~~ 105 (393)
.|..+++.+.+++.... .+....+. ....++|+.+|+++|.++ .+ ++++|++++ .++..++.++|++++..+
T Consensus 6 ~p~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~ 82 (355)
T TIGR03301 6 GPLSTSATVRDAMLVDW--CHWDSEFN-DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLIN 82 (355)
T ss_pred CCCCCCHHHHHHhhhhc--cCCCHHHH-HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECC
Confidence 35555666666654421 11111122 567899999999999862 45 456777778 677777788887665554
Q ss_pred -CccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC--CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEE
Q psy12791 106 -VYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP--NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILL 177 (393)
Q Consensus 106 -~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~l 177 (393)
.|+. .+...++..|.+++.++.+ |++++++.+.+ +++++++++++||||.+.|+++|.++|+++ ++++
T Consensus 83 ~~~~~---~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~-~~~l 158 (355)
T TIGR03301 83 GAYGE---RLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSH-GAVL 158 (355)
T ss_pred Cchhh---HHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHc-CCEE
Confidence 4442 2456677889999988764 78999998864 456788899999999999999999999999 9999
Q ss_pred EEeCccCcccccCCC-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH---------------H--hcCCC
Q psy12791 178 VLDNTFLTAYYQKSL-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ---------------N--SMGVV 239 (393)
Q Consensus 178 ivDea~~~~~~~~~~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~---------------~--~~~~~ 239 (393)
|+|++++.+....++ ..+.|++++|++|+++|++| +||++++ +++++.+.... . .....
T Consensus 159 ivD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 235 (355)
T TIGR03301 159 IVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPG--FGFVIAR-RDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFT 235 (355)
T ss_pred EEEeccccCCcccchhhcCccEEEecCCcccccCCc--eeEEEEC-HHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCC
Confidence 999988765432222 24789999999999878888 7999998 77777654100 0 00112
Q ss_pred CCHHHHHHHHhccC------CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC
Q psy12791 240 PSPFDCWLVTRGLK------TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG 313 (393)
Q Consensus 240 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
.+......+...++ .+...+++..++.+.+.+.|+++ ++. +..+. . ...+.++++.+++
T Consensus 236 ~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~-~~~~~--~-----------~~~~~~~~~~~~~ 300 (355)
T TIGR03301 236 PPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQ-PLLPE--R-----------WQSPIIVSFLYPD 300 (355)
T ss_pred CcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCe-eecCC--C-----------CCCCcEEEEECCC
Confidence 23222222222221 14445666677778888888765 332 21111 0 0112356787742
Q ss_pred C-HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 314 G-AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 314 ~-~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
. ......+.+.+...++.+..|+.. ..++||++++..+++++++.+.++|+++
T Consensus 301 ~~~~~~~~~~~~l~~~gi~i~~~~~~------------------------~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 301 DPDFDFDDFYQELKERGFVIYPGKLT------------------------LADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred CCcchHHHHHHHHHHCCEEEECCccc------------------------cccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 1 123345556565445554443210 0268999998888999999999998764
No 189
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.93 E-value=1.4e-23 Score=197.66 Aligned_cols=303 Identities=20% Similarity=0.199 Sum_probs=202.9
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
..+...++++.+++++|.++.+++++|++++ .++..+ +++||+|+++.++|.++ ...+...|++++.++.+
T Consensus 16 ~~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~ 91 (352)
T cd00616 16 LGPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT----ANAILLLGATPVFVDIDPDT 91 (352)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH----HHHHHHcCCeEEEEecCCCc
Confidence 3578999999999999998899999999998 666666 58999999999999864 34456789999988764
Q ss_pred ---CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC--CCCcCcEEEEccc--
Q psy12791 132 ---KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS--LPWGVDIVLYSLT-- 204 (393)
Q Consensus 132 ---d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~--~~~~~di~~~S~s-- 204 (393)
|++++++.+++++++|+++| ++|.+.|+++|.++|+++ |+++|+|++|+.+..... .....|+.+.|++
T Consensus 92 ~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~-~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~ 167 (352)
T cd00616 92 YNIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRH-GLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPT 167 (352)
T ss_pred CCcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHc-CCeEEEECCCCCCCeECCEEcccCcceeEEcCCCC
Confidence 68899999988899999865 689999999999999999 999999999986543221 2223588888877
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHHHHhc---------------CCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKFLQNSM---------------GVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEV 269 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (393)
|+++ .+ .+|+++++++++.++++...... ....++..+.+....++.+....++..++.+.+
T Consensus 168 K~~~-~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~ 244 (352)
T cd00616 168 KNLT-TG--EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERY 244 (352)
T ss_pred CCCc-cc--CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9983 32 37888887778888776544311 112345555555555566666777778888888
Q ss_pred HHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-HHHHHHHHHhcCccccccccCCccccccCcccc-
Q psy12791 270 AKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-AEETRIFLESLLIFRCAESLGGIESLADLPAEM- 347 (393)
Q Consensus 270 ~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~- 347 (393)
.+.|+.++++.... +. +.. .....++.|.+++. ......+.+.|...++.... .+.........
T Consensus 245 ~~~L~~~~g~~~~~-~~-~~~----------~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~--~~~~~~~~~~~~ 310 (352)
T cd00616 245 KELLADLPGIRLPD-VP-PGV----------KHSYHLYVIRLDPEAGESRDELIEALKEAGIETRV--HYPPLHHQPPYK 310 (352)
T ss_pred HHHhcCCCCccCCC-CC-CCC----------ceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeee--ecCccccCHhhh
Confidence 99998776654221 11 000 01135677777420 12333444444333332211 11100000000
Q ss_pred -----cCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 348 -----THKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 348 -----~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
.....+.... ...+.|||+++..+++++++.+.++|+
T Consensus 311 ~~~~~~~~~~~~a~~----~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 311 KLLGYPPGDLPNAED----LAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred hccCCCcCCChHHHH----HHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 0001111111 125799999999999999999998874
No 190
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.93 E-value=4e-24 Score=202.64 Aligned_cols=289 Identities=20% Similarity=0.265 Sum_probs=200.1
Q ss_pred chHHHHHHHHHHHhCCCc--EEEeccHHH-HH-HHHHHh---cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 59 PTRRNLERCIASLEEAKH--GLCYSSGLG-AV-TAVTHL---LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~--~i~~~~G~~-al-~~~~~~---~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
...+++|+.+|+++|++. .|++++|++ ++ .++..+ +++||+|++.+..|++....+....+..|++++.++.+
T Consensus 43 ~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~ 122 (371)
T PF00266_consen 43 EILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPAD 122 (371)
T ss_dssp HHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEG
T ss_pred HHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhcccccc
Confidence 456789999999999874 666555554 67 666666 78999999999999998877888888999999888763
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCC-CcCcEEEEcccc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLP-WGVDIVLYSLTK 205 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~-~~~di~~~S~sK 205 (393)
|++++++.+++++++|++++.+|.||...|+++|.++|+++ |+++++|.+++.+.....+. .++|+++.|.+|
T Consensus 123 ~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~-~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~K 201 (371)
T PF00266_consen 123 PGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAHEY-GALLVVDAAQSAGCVPIDLDELGADFLVFSSHK 201 (371)
T ss_dssp TTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHHHT-TSEEEEE-TTTTTTSS--TTTTTESEEEEESTS
T ss_pred ccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhhcc-CCceeEechhccccccccccccccceeeecccc
Confidence 78999999999999999999999999999999999999999 99999999999876544433 588999999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHHh---------------------cCCCCCHHHHHHHHhccCC-----HHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQNS---------------------MGVVPSPFDCWLVTRGLKT-----LPCRL 259 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~-----~~~~~ 259 (393)
++|++| +|+++.+ +++.++++..... .+++.+......+...++. +....
T Consensus 202 -l~gp~G--~g~l~v~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~ 277 (371)
T PF00266_consen 202 -LGGPPG--LGFLYVR-PEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIR 277 (371)
T ss_dssp -TTSSST--EEEEEEE-HHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCCCc--hhhheeh-hhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccch
Confidence 668999 8999998 7777777321110 1112222222222222222 22334
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhcCccccccccCCcc
Q psy12791 260 KEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESLLIFRCAESLGGIE 338 (393)
Q Consensus 260 ~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~g~~~ 338 (393)
++..+..+.+.+.|..++.+. +..|. .. ...++++.|.+++ +.......++.. ++.+..|..+
T Consensus 278 ~~~~~l~~~~~~~l~~~~~~~-~~~~~---~~---------~~~~~i~~~~~~~~~~~~~~~~L~~~---~I~~~~G~~~ 341 (371)
T PF00266_consen 278 ERIRELAEYLREALEELPGIE-VLGPD---DE---------PRRPSIVSFNLPGSDADDVVKYLEER---GIAVSTGSAC 341 (371)
T ss_dssp HHHHHHHHHHHHHHHHTTTEE-ESSSS---CG---------GBGTTEEEEEETTSSHHHHHHHHHHH---TEEEEESTTT
T ss_pred hhhhhHHHHHHhhhhcCCcee-Eeeec---cc---------ccccceEEEeecCCCHHHHHHHHhhc---CEEEeccCcc
Confidence 555566777788888777654 22221 00 1236889999964 344444444433 4555545443
Q ss_pred ccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHH
Q psy12791 339 SLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADL 383 (393)
Q Consensus 339 s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l 383 (393)
.... .... +. .+.||+|++.+++++++++|
T Consensus 342 ~~~~------------~~~~--~~-~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 342 AGPS------------LDIL--GM-GGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp CHHH------------HHHH--HT-TTEEEEE-GTTSSHHHHHHH
T ss_pred cHHH------------HHHh--CC-CCEEEEeccCCCCHHHHhhC
Confidence 3110 0000 11 38999999999999999876
No 191
>PRK14012 cysteine desulfurase; Provisional
Probab=99.93 E-value=7.5e-24 Score=202.84 Aligned_cols=301 Identities=19% Similarity=0.167 Sum_probs=188.6
Q ss_pred chHHHHHHHHHHHhCCC-cEEEeccHHH-HH-HHHHHh----cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 59 PTRRNLERCIASLEEAK-HGLCYSSGLG-AV-TAVTHL----LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~-~~i~~~~G~~-al-~~~~~~----~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
+..+++|+.+|+++|.+ +.+++++|++ ++ .++.++ .++||+|++++++|+++...+.. ++..|++++.++.+
T Consensus 49 ~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~-~~~~g~~~~~v~~~ 127 (404)
T PRK14012 49 EAVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQ-LEREGFEVTYLDPQ 127 (404)
T ss_pred HHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHH-HHhCCCEEEEEccC
Confidence 45678899999999986 5566665554 56 554443 37899999999999876544433 35569999988764
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEcccc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTK 205 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK 205 (393)
|++++++++++++++|++++++||||.++|+++|.++|+++ |+++++|++++.+...... ..++|+++.|++|
T Consensus 128 ~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~-g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K 206 (404)
T PRK14012 128 SNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRER-GIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHK 206 (404)
T ss_pred CCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHc-CCEEEEEcchhcCCcccCcccCCCCEEEEehhh
Confidence 78999999999999999999999999999999999999999 9999999999876543222 3478999999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHH-------hcCCCCCHHHHHHHHhcc----CCHHHHHHHHHHHHHHHHHHHh
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQN-------SMGVVPSPFDCWLVTRGL----KTLPCRLKEHERGSIEVAKFLE 274 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~ 274 (393)
.+ |+.| .|+++.+++.. .++..... .................+ .......++..+..+.+.+.|+
T Consensus 207 ~~-gp~g--~G~l~~~~~~~-~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~ 282 (404)
T PRK14012 207 IY-GPKG--IGALYVRRKPR-VRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIK 282 (404)
T ss_pred cc-CCCc--eEEEEEecCCC-CCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 87 6766 88888773322 22211000 001111111111111111 1223334445555666677777
Q ss_pred hCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCCh
Q psy12791 275 SHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPK 354 (393)
Q Consensus 275 ~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~ 354 (393)
.++.+... ..... .......++|.+. +. +.+...++ ++.++.|..+......+.
T Consensus 283 ~~~~i~~~--~~~~~----------~~~~~~~~~~~~~-~~---~~~~~~l~--~~~i~~g~~~~~~~~~~~-------- 336 (404)
T PRK14012 283 DIEEVYLN--GDLEQ----------RVPGNLNVSFNYV-EG---ESLIMALK--DLAVSSGSACTSASLEPS-------- 336 (404)
T ss_pred cCCCEEEe--CCccc----------cCCCEEEEEEeCc-CH---HHHHHhCC--CeEEEchhhhCCCCCCCC--------
Confidence 66655311 11000 0001123555542 22 23555554 344444433221110000
Q ss_pred hhHhhcCC----CCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 355 ETRDALGI----TDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 355 ~~~~~~g~----~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
......+. ..+.||+|++..+++++++.+.++|+++.
T Consensus 337 ~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~ 377 (404)
T PRK14012 337 YVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSI 377 (404)
T ss_pred HHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 00111232 35899999999999999999999998764
No 192
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.93 E-value=2.3e-23 Score=193.95 Aligned_cols=272 Identities=14% Similarity=0.094 Sum_probs=178.5
Q ss_pred CchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHHHhcCCCCeEEEcC---CCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 58 NPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVTHLLSAGDHIISGD---DVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~~~~~~gd~vl~~~---~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
.+...+|++.+|+++|.+ +.+++++|.+++ .++.+++++||+|+++. |+|. .+...++..|+++... .
T Consensus 53 ~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~----s~~~~~~l~ga~~~~~--~ 126 (346)
T TIGR03576 53 AIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHP----SIPRSCKLAGAEYFES--D 126 (346)
T ss_pred HHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCch----hHHHHHHHcCCEEecc--C
Confidence 367889999999999984 555555556677 77788899999999753 5666 4667778888886433 4
Q ss_pred CHHHHHhhcCCCCcEEEEecCCCCccccc---CHHHHHHHHHhCCCcEEEEeCccCccccc---C-C-CCCcCcEEEEcc
Q psy12791 132 KIENLIKYIKPNTKMVWIENPTNPLMTVF---DVKAISAVVKQHPDILLVLDNTFLTAYYQ---K-S-LPWGVDIVLYSL 203 (393)
Q Consensus 132 d~~~l~~~l~~~~~~v~l~~p~nptG~~~---~~~~l~~l~~~~~~~~livDea~~~~~~~---~-~-~~~~~di~~~S~ 203 (393)
+++++.. .+++++|+++ ++|++|.++ ++++|.++|+++ ++++++||+|+.+... . + ...+.|+++.|+
T Consensus 127 ~l~~l~~--~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~-~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~ 202 (346)
T TIGR03576 127 ELSELKK--IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSK-EAIVLVDDASGARVRRLYGQPPALDLGADLVVTST 202 (346)
T ss_pred CHHHHhh--CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHc-CCEEEEECCccccccccCCCCCHHHcCCcEEEecc
Confidence 6666533 2467888885 468999995 588888899999 9999999999976421 1 1 123568999999
Q ss_pred cccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCH--HHHHHHHHHHHHHHHHHHhhCCCcce
Q psy12791 204 TKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTL--PCRLKEHERGSIEVAKFLESHPCVKG 281 (393)
Q Consensus 204 sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~ 281 (393)
||+ ++|+|+||++++ +++++.++.....+..+.++..+..+...++.. ...++.+.++...+.+.++.+ .
T Consensus 203 SKa---laG~r~G~v~~~-~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~---~- 274 (346)
T TIGR03576 203 DKL---MDGPRGGLLAGR-KELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL---N- 274 (346)
T ss_pred chh---ccccceEEEEeC-HHHHHHHHHhhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC---C-
Confidence 994 577899999998 889998887766555445555655555555442 223344444544455555421 1
Q ss_pred EeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC--HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhh
Q psy12791 282 VLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG--AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDA 359 (393)
Q Consensus 282 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~ 359 (393)
+ .+. ..+++++.+++. .+....++. ..++.+.+|..+.
T Consensus 275 ~-~~~----------------~~~f~~~~~~~~~~~~~~~~ll~---~~gV~v~~~~~f~-------------------- 314 (346)
T TIGR03576 275 V-ERT----------------PTGFVIKGVEEEKLIEIGLDLLR---NYGIITITAVGMP-------------------- 314 (346)
T ss_pred C-CcC----------------CCeEEEEeCCCCCHHHHHHHHHH---hCCEEEeCCcccC--------------------
Confidence 1 111 135788888421 233443433 3344444433220
Q ss_pred cCCCCCeEEEEecCCC-hHHHHHHHHHHHHH
Q psy12791 360 LGITDNLVRLSVGVEG-YTDLIADLDQALRK 389 (393)
Q Consensus 360 ~g~~~~~iRls~~~~~-~~~~i~~l~~al~~ 389 (393)
..++++|+|++... +..+.+.+.++|++
T Consensus 315 --~~~~~vRis~~~~~~~~~~~~~~~~al~~ 343 (346)
T TIGR03576 315 --GASKTLRFDLAAKDAERIGDDYLVEAVKD 343 (346)
T ss_pred --CCCCeEEEEEecChHHhcCHHHHHHHHHh
Confidence 01579999999765 33345666666654
No 193
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.93 E-value=8.9e-24 Score=200.11 Aligned_cols=315 Identities=16% Similarity=0.120 Sum_probs=203.4
Q ss_pred CCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC---cEE-EeccHHHHH-HHHHHhcCCCCeEEEc
Q psy12791 29 VIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK---HGL-CYSSGLGAV-TAVTHLLSAGDHIISG 103 (393)
Q Consensus 29 ~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~---~~i-~~~~G~~al-~~~~~~~~~gd~vl~~ 103 (393)
..-|..+++.+.+++.... . +....+. ....++|+.+++++|.+ +.+ ++++|+.++ .++..+..+||.|+++
T Consensus 10 ~pgP~~~~~~~~~a~~~~~-~-~~~~~~~-~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~ 86 (368)
T PRK13479 10 TPGPLTTSRTVREAMLRDW-G-SWDDDFN-ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVP 86 (368)
T ss_pred cCCCCCCCHHHHHHhCCCC-C-CCChHHH-HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence 3456666666666654442 1 1111122 36789999999999985 334 456677788 7778888899999988
Q ss_pred CCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC--CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcE
Q psy12791 104 DDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP--NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDIL 176 (393)
Q Consensus 104 ~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~ 176 (393)
.++|.+.. +...++..|++++.++.+ |++++++.+.+ ++++|++++|+||||...|+++|.++|+++ +++
T Consensus 87 ~~~~~~~~--~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~-~~~ 163 (368)
T PRK13479 87 DNGAYGAR--IAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRH-GKR 163 (368)
T ss_pred eCCchHHH--HHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHc-CCE
Confidence 87765432 346678889999988774 68999988854 467899999999999999999999999999 999
Q ss_pred EEEeCccCcccccCCC-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc--------------C---C
Q psy12791 177 LVLDNTFLTAYYQKSL-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM--------------G---V 238 (393)
Q Consensus 177 livDea~~~~~~~~~~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~--------------~---~ 238 (393)
+++|+++..+....++ ..+.|+++.|++|++.|++| +||++++ +++++.+......+ + .
T Consensus 164 livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (368)
T PRK13479 164 LIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPG--FGFVIAR-RSELEACKGNSRSLSLDLYDQWAYMEKTGQWRF 240 (368)
T ss_pred EEEEcccccCCccccccccCceEEEecCccccccCCC--ceEEEEC-HHHHHHhhcCCCCeeecHHHHHhhhcccCCCCC
Confidence 9999877654322222 24689999999999878999 7999998 77777654321100 0 0
Q ss_pred CCCHHHHH---HHHhcc---CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc
Q psy12791 239 VPSPFDCW---LVTRGL---KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN 312 (393)
Q Consensus 239 ~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
..+..... .++..+ ..+..+.++..+.+..+.+.|+.+ ++. +..+. . ...+.++.|.++
T Consensus 241 t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~---~----------~~~~~~~~~~~~ 305 (368)
T PRK13479 241 TPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFE-PLLDA---E----------IQSPIIVTFHAP 305 (368)
T ss_pred CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCc---h----------hcCceEEEEECC
Confidence 11211111 111111 123445566677777788888765 222 11111 0 001234555553
Q ss_pred CCH-HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 313 GGA-EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 313 ~~~-~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+ ...+.+.+.+...++.+..|... ..+++|+|...++++++++.+.++|+++.
T Consensus 306 ~~~~~~~~~l~~~L~~~gi~v~~g~~~------------------------~~~~iRis~~~~~t~edi~~~l~~L~~~l 361 (368)
T PRK13479 306 ADPAYDFKEFYERLKEQGFVIYPGKLT------------------------QVDTFRIGCIGDVDAADIRRLVAAIAEAL 361 (368)
T ss_pred CCCCcCHHHHHHHHHHCCEEEecCCCC------------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 211 23345666665556655443110 13689999866778888888888887653
No 194
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=4.5e-23 Score=197.48 Aligned_cols=284 Identities=17% Similarity=0.143 Sum_probs=193.1
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcC--CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLS--AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIE 134 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~--~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~ 134 (393)
.+...+|+++||+++|.+.+++++||+++. .++..+.. +||.|+.....|+++.. .++..|.++..++..|++
T Consensus 89 ~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~----~~~~~g~~~~~~~~~d~~ 164 (406)
T PRK13393 89 NHYHVLLEAELADLHGKEAALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIE----GIRHSRAEKRIFRHNDPA 164 (406)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHH----HHHHcCCeEEEeCCCCHH
Confidence 346789999999999988999999999986 55554544 67877777777765432 334567888888877877
Q ss_pred HHHhhcC----CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-C--------CCCCcCcEEEE
Q psy12791 135 NLIKYIK----PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ-K--------SLPWGVDIVLY 201 (393)
Q Consensus 135 ~l~~~l~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~-~--------~~~~~~di~~~ 201 (393)
++++.+. +++++|++++++|++|.+.|+++|.++|+++ ++++++||+|+.+.+. . ......|++++
T Consensus 165 ~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~-~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~ 243 (406)
T PRK13393 165 DLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAEKH-GAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEG 243 (406)
T ss_pred HHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHc-CCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEE
Confidence 7777664 3578999999999999999999999999999 9999999999854421 1 11123578899
Q ss_pred cccccccCCCCceEEEEEecChHHHHHHHHHHHh--cCCCCCHHHHHHHHhccCCH---HHHHHHHHHHHHHHHHHHhhC
Q psy12791 202 SLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS--MGVVPSPFDCWLVTRGLKTL---PCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 202 S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~ 276 (393)
||+|.+ |.+| ||++++ +++.+.++..... ++...++..+..+...++.+ ...+++..++.+.+.+.|+..
T Consensus 244 tlsKa~-g~~G---G~~~~~-~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (406)
T PRK13393 244 TLAKAF-GVMG---GYITGS-AALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKA 318 (406)
T ss_pred eCchhh-cccC---ceeeCC-HHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence 999999 5654 898876 7888877654432 23344555444444444322 223445556677778878653
Q ss_pred CCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCc-cccccccCCccccccCcccccCCCCChh
Q psy12791 277 PCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLI-FRCAESLGGIESLADLPAEMTHKSIPKE 355 (393)
Q Consensus 277 ~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~g~~~s~~~~~~~~~~~~~~~~ 355 (393)
+...+ ++.+.++.+.+ ++......+.+.+.. .++.+..+.. |..
T Consensus 319 -g~~~~------------------~~~~~i~~v~~-~~~~~~~~l~~~L~~~~Gi~v~~~~~------p~~--------- 363 (406)
T PRK13393 319 -GIPHL------------------PNPSHIVPVMV-GDPVLCKQISDELLDRYGIYVQPINY------PTV--------- 363 (406)
T ss_pred -CCCcC------------------CCCCCeEEEEe-CCHHHHHHHHHHHHHhCCEEEEeECC------CCC---------
Confidence 21101 11256777766 444455666666543 2444433211 100
Q ss_pred hHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 356 TRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 356 ~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
....+.||+|++..+++++++.+.++|+++.
T Consensus 364 -----p~g~~~iRis~~~~~t~edid~l~~~l~~~~ 394 (406)
T PRK13393 364 -----PRGTERLRITPSPLHTDADIEHLVQALSEIW 394 (406)
T ss_pred -----CCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 0013689999999999999999999998763
No 195
>KOG0256|consensus
Probab=99.92 E-value=3.9e-23 Score=184.40 Aligned_cols=271 Identities=18% Similarity=0.166 Sum_probs=183.2
Q ss_pred chHHHHHHHHHHHhC---------CCcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcc-cCCcEEE
Q psy12791 59 PTRRNLERCIASLEE---------AKHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAP-KIGLEVD 126 (393)
Q Consensus 59 ~~~~~lr~~la~~~~---------~~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~-~~g~~v~ 126 (393)
.+...+|+++|+++. -++.+++++|+++ . .+...+..|||.-++|.|.|++ +..-++ +.|++++
T Consensus 121 ~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~g----fdrdl~~rTgveiv 196 (471)
T KOG0256|consen 121 HGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPG----FDRDLRWRTGVEIV 196 (471)
T ss_pred cCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCc----ccccceeccCceEE
Confidence 466789999999864 1357888888765 6 5566788999999999999997 444444 6789999
Q ss_pred eeCCC-------CHHHHHhhcC------CCCcEEEEecCCCCcccccCHHH---HHHHHHhCCCcEEEEeCccCcccccC
Q psy12791 127 FVDLR-------KIENLIKYIK------PNTKMVWIENPTNPLMTVFDVKA---ISAVVKQHPDILLVLDNTFLTAYYQK 190 (393)
Q Consensus 127 ~~~~~-------d~~~l~~~l~------~~~~~v~l~~p~nptG~~~~~~~---l~~l~~~~~~~~livDea~~~~~~~~ 190 (393)
.+.+. +.+.+++++. .+++.|+++||+||.|++++.++ +..++.++ ++.+|+||+|+..++..
T Consensus 197 pv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k-niHvI~DEIya~sVF~~ 275 (471)
T KOG0256|consen 197 PVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK-NIHVISDEIYAGSVFDK 275 (471)
T ss_pred EEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc-ceEEEeehhhcccccCc
Confidence 88774 4677777664 35789999999999999999665 45566677 99999999999866542
Q ss_pred C-----------C--CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCH--
Q psy12791 191 S-----------L--PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTL-- 255 (393)
Q Consensus 191 ~-----------~--~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 255 (393)
+ . ..+..-++.|+||-+ |+||+|+|.++..++.+....+++..+. ..++..+.++..-+..-
T Consensus 276 ~~F~Sv~ev~~~~~~~~~rvHivyslSKD~-GlpGfRvGviYS~ne~VvsaA~kmssf~--~vSs~tQ~~la~LLSD~~f 352 (471)
T KOG0256|consen 276 SEFRSVLEVRKDPHLDPDRVHIVYSLSKDF-GLPGFRVGVIYSNNEDVVSAATKMSSFG--LVSSQTQYLLASLLSDEEF 352 (471)
T ss_pred cCceEHHHHhhccccCCCcEEEEEEecccc-CCCceEEEEEEecChHHHHHHHHHhhcc--CCcHHHHHHHHHHhchHHH
Confidence 2 1 123347888999999 7999999999999888888777666532 34555555555444431
Q ss_pred -----HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc-----CC-HHHHHHHHHh
Q psy12791 256 -----PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN-----GG-AEETRIFLES 324 (393)
Q Consensus 256 -----~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~ 324 (393)
....+++.....++.+.|++. .+|=++ ++.|-++|+.++ .+ ..+.+.+..-
T Consensus 353 ~~~yl~en~~Rl~~rh~~~~~gLk~l------gI~cl~------------s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i 414 (471)
T KOG0256|consen 353 TREYLRENNKRLRIRHRYIVEGLKAL------GIPCLK------------SNAGLFCWVDLRKLLTSLTFEGELELWERI 414 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhc------CCceee------------cCCeeEEEEEhHHhcCcCChHHHHHHHHHH
Confidence 222333334444555555542 222222 223566788764 13 3344444444
Q ss_pred cCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCCh
Q psy12791 325 LLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGY 376 (393)
Q Consensus 325 l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~ 376 (393)
+...++.+++|..+. |. .+||+|++|.-...
T Consensus 415 ~~~vklnlSpG~s~~--C~-------------------EpGWFRvcFAn~~~ 445 (471)
T KOG0256|consen 415 LDNVKLNLSPGSSCH--CH-------------------EPGWFRVCFANMSE 445 (471)
T ss_pred HHhhccccCCCCcce--ec-------------------CCCeEEEEeccCCH
Confidence 444577788887642 11 17999999975543
No 196
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.92 E-value=2.5e-23 Score=198.51 Aligned_cols=194 Identities=18% Similarity=0.227 Sum_probs=145.9
Q ss_pred CCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--cEEE-eccHHHHH-HHHHHhcCCCCeEEEcC
Q psy12791 29 VIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK--HGLC-YSSGLGAV-TAVTHLLSAGDHIISGD 104 (393)
Q Consensus 29 ~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~--~~i~-~~~G~~al-~~~~~~~~~gd~vl~~~ 104 (393)
+..|...++.+.+++..... .+ .+......++++++.+++++|.+ +.++ .++|+.++ .++..++++||+|++++
T Consensus 14 ~pGP~~~~~~V~~a~~~~~~-~~-~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~ 91 (401)
T PLN02409 14 VPGPVNIPERVLRAMNRPNE-DH-RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFR 91 (401)
T ss_pred cCCCCCCCHHHHHHhcCCCC-CC-CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeC
Confidence 34455555556665543311 11 11112245678888899999986 3444 45555557 66677889999999999
Q ss_pred CCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC----CCcEEEEecCCCCcccccCHHHHHHH--HHhCC
Q psy12791 105 DVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP----NTKMVWIENPTNPLMTVFDVKAISAV--VKQHP 173 (393)
Q Consensus 105 ~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~----~~~~v~l~~p~nptG~~~~~~~l~~l--~~~~~ 173 (393)
+.|.+. .+...++..|++++.++.+ |++++++.+++ ++++|++++++||||.++|+++|.++ |+++
T Consensus 92 ~~~~~~--~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~- 168 (401)
T PLN02409 92 IGQFSL--LWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQH- 168 (401)
T ss_pred CCchhH--HHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhcc-
Confidence 888753 2456778889999988764 68899998875 68999999999999999999999999 9999
Q ss_pred CcEEEEeCccCcccccCCC-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH
Q psy12791 174 DILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK 230 (393)
Q Consensus 174 ~~~livDea~~~~~~~~~~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~ 230 (393)
|+++++|++++.+...... ..++|+++.|.+||++|++| +||++.+ +++++++.
T Consensus 169 g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G--~G~l~~~-~~~~~~~~ 223 (401)
T PLN02409 169 PALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTG--LGIVCAS-PKALEASK 223 (401)
T ss_pred CcEEEEEcccccCCccccccccCccEEEEcCccccCcCCC--cceeEEC-HHHHHHHh
Confidence 9999999999865543222 25789999999999987887 9999987 77777664
No 197
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.92 E-value=1.3e-22 Score=191.25 Aligned_cols=309 Identities=18% Similarity=0.152 Sum_probs=205.9
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---- 131 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---- 131 (393)
.+...++++.+++++|.++.+++++|++++ .++.++ +++||+|++++++|.++ ...+...|++++.++.+
T Consensus 30 g~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~----~~~~~~~G~~~v~vd~d~~~~ 105 (376)
T TIGR02379 30 GPFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVST----ANAFVLRGAKIVFVDIRPDTM 105 (376)
T ss_pred cHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHH----HHHHHHcCCEEEEEecCCCcC
Confidence 366889999999999998888888888888 666666 78999999999999864 44456779999999875
Q ss_pred --CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc--CCCCCcCcEEEEccc--c
Q psy12791 132 --KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ--KSLPWGVDIVLYSLT--K 205 (393)
Q Consensus 132 --d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~--~~~~~~~di~~~S~s--K 205 (393)
|++++++++++++++|+ |+||+|...++++|.++|+++ |++||+|++|+.+... .+...-.|+.+.||+ |
T Consensus 106 ~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d~~~I~~la~~~-~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K 181 (376)
T TIGR02379 106 NIDETLIESAITHRTKAIV---PVHYAGVACDMDTIMALANKH-QLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETK 181 (376)
T ss_pred CCCHHHHHHhcCcCceEEE---EeCCCCCccCHHHHHHHHHHC-CCEEEEECccccCCccCCcccCCCCCEEEEeCCCCC
Confidence 67889999988899987 667889999999999999999 9999999999876421 222222367777764 5
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHHhc-------------------C--CCCCHHHHHHHHhccCCHHHHHHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQNSM-------------------G--VVPSPFDCWLVTRGLKTLPCRLKEHER 264 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~-------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (393)
.+ .+|.++|+++++++++.++++..+..- | ..++..++++....++.+....++..+
T Consensus 182 ~l--~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~ 259 (376)
T TIGR02379 182 NY--TSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLA 259 (376)
T ss_pred cC--cccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHH
Confidence 55 345579999998899999987665411 1 113345566666677777777777777
Q ss_pred HHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCc
Q psy12791 265 GSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLP 344 (393)
Q Consensus 265 ~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~ 344 (393)
+++...+.|..++.......|..+.... ..+ .++++.++. ....+.+.+.|+..++....+. ..+...+
T Consensus 260 ~~~~y~~~L~~~~~~~~~~~~~~~~~~~--------~~~-~~~~i~~~~-~~~r~~l~~~L~~~gI~~~~~~-~p~~~~~ 328 (376)
T TIGR02379 260 TWQLYQDALKPLEEKGIIELPSIPNGCQ--------HNA-HMFYIKLKD-EDDRNELIKYLKEQEIMAVFHY-VPLHSSP 328 (376)
T ss_pred HHHHHHHHhccCCcCCeeeCCCCCCCCe--------eee-EEEEEEECC-cCCHHHHHHHHHHCCCCccccC-cCCCcch
Confidence 7777777776544211112222211100 001 345667732 1234566666655555543321 1111111
Q ss_pred cccc----CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 345 AEMT----HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 345 ~~~~----~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.... ....|..+. .....|.|-++..-++++++.+.++++++.
T Consensus 329 ~~~~~~~~~~~~p~~~~----~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 329 AGRYFGRFHGEDIYTTK----ESERLVRLPLYYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred hHHhhCCCCCCChHHHH----HHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 1000 011122211 225678888888889999999999998753
No 198
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.92 E-value=8.3e-23 Score=193.09 Aligned_cols=288 Identities=13% Similarity=0.098 Sum_probs=189.0
Q ss_pred chHHHHHHHHHHHhCCC---cEEEeccH-HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--
Q psy12791 59 PTRRNLERCIASLEEAK---HGLCYSSG-LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-- 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~---~~i~~~~G-~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-- 131 (393)
...+++|+.+++++|++ +.|++++| +.++ .++..++.+||.+++..+.+.+. .+...++..|++++.++.+
T Consensus 35 ~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~--~~~~~a~~~g~~~~~v~~~~~ 112 (363)
T TIGR02326 35 IVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGA--RIVQIAEYLGIPHHVVDTGEV 112 (363)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhH--HHHHHHHHcCCceEEEeCCCC
Confidence 45678899999999986 25666554 6668 66777778888876655544432 1345678889999988774
Q ss_pred ---CHHHHHhhcCC--CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEcccc
Q psy12791 132 ---KIENLIKYIKP--NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTK 205 (393)
Q Consensus 132 ---d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK 205 (393)
|++++++.+.. ++++|.+++++||||..+|+++|.++|+++ |+++++|++++.+....++ ..+.|+++.|++|
T Consensus 113 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~-g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K 191 (363)
T TIGR02326 113 EPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRH-GKVTIVDAMSSFGGIPIDIAELHIDYLISSANK 191 (363)
T ss_pred CCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHc-CCEEEEEccccccCcccchhhcCccEEEecCcc
Confidence 78899988864 457888999999999999999999999999 9999999998865432222 2478999999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHH------------Hh---cC---CCCCHHHHHHHHhccC------CHHHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQ------------NS---MG---VVPSPFDCWLVTRGLK------TLPCRLKE 261 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~------------~~---~~---~~~~~~~~~~~~~~~~------~~~~~~~~ 261 (393)
+++|++| +||++++ ++.++.+.... .. .+ ...+......+.+.++ .++.+.++
T Consensus 192 ~l~~p~G--~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~ 268 (363)
T TIGR02326 192 CIQGVPG--FGFVIAR-QAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQR 268 (363)
T ss_pred ccccCCc--ceEEEEC-HHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 9988888 7999998 66666542100 00 00 0122222222222221 23445566
Q ss_pred HHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-HHHHHHHHHhcCccccccccCCcccc
Q psy12791 262 HERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-AEETRIFLESLLIFRCAESLGGIESL 340 (393)
Q Consensus 262 ~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~~~s~ 340 (393)
+.+.+..+.+.|+++ ++..+..+. ...+.+.+|.++.. ......+.+.+...++.++.|..+
T Consensus 269 ~~~~~~~l~~~L~~~-g~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~-- 331 (363)
T TIGR02326 269 YQQNQKTLVAGMRAL-GFEPLLDDE--------------IQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVS-- 331 (363)
T ss_pred HHHHHHHHHHHHHHc-CCeeccCcc--------------cCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCC--
Confidence 677777888888765 222111110 01123467777421 123445556665545555544210
Q ss_pred ccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 341 ADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
...++|+|+..+++.++++.+.++|+++.
T Consensus 332 ----------------------~~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 332 ----------------------QVDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred ----------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 14689999866778888899999888754
No 199
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.92 E-value=2.3e-22 Score=189.07 Aligned_cols=293 Identities=14% Similarity=0.092 Sum_probs=187.2
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCC---------------eEEEcCCCccchHHHHHHhcccC
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGD---------------HIISGDDVYGGTYRYFAQVAPKI 121 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd---------------~vl~~~~~y~~~~~~~~~~~~~~ 121 (393)
++..+++++.+|+++|.++.+++++|++++ .++.+++++|| +|+++.|.|......+...+...
T Consensus 44 ~~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~ 123 (363)
T TIGR01437 44 KELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLG 123 (363)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhc
Confidence 466788999999999998887777778888 78888888888 89998866642100134566778
Q ss_pred CcEEEeeCCC---CHHHHHhhcCCCCcEEE-EecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCc
Q psy12791 122 GLEVDFVDLR---KIENLIKYIKPNTKMVW-IENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVD 197 (393)
Q Consensus 122 g~~v~~~~~~---d~~~l~~~l~~~~~~v~-l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~d 197 (393)
|+++++++.+ |+++++++++++|++++ +++|+||+|.+.|+++|.++|+++ |+++++|++|.... ......+.|
T Consensus 124 g~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~-gi~vivD~a~~~~~-~~~~~~g~D 201 (363)
T TIGR01437 124 GGKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSVEDAAQVAQEH-NLPLIVDAAAEEDL-QKYYRLGAD 201 (363)
T ss_pred CCeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCHHHHHHHHHHc-CCeEEEECCCCCch-HHHHHcCCC
Confidence 9999998764 89999999999999766 578899999999999999999999 99999999998322 112235789
Q ss_pred EEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCC-----HHHHHHHHhc-cCCHHHHHHHHHHHHHHHHH
Q psy12791 198 IVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPS-----PFDCWLVTRG-LKTLPCRLKEHERGSIEVAK 271 (393)
Q Consensus 198 i~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 271 (393)
+++.|+||++.|+ ++|+++.+ +++++.++......+.... ......+... .+......+...+++..+.+
T Consensus 202 ~~~~S~~K~l~gp---~~G~l~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~ 277 (363)
T TIGR01437 202 LVIYSGAKAIEGP---TSGLVLGK-KKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIE 277 (363)
T ss_pred EEEEeCCcccCCC---ceEEEEEc-HHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHH
Confidence 9999999988544 68999986 7777765432221111000 0011111111 11111233344455667888
Q ss_pred HHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCC
Q psy12791 272 FLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKS 351 (393)
Q Consensus 272 ~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~ 351 (393)
.|.+.+++.....+..... .-....++|......-....+.+.|+..+..+..- + +
T Consensus 278 ~L~~i~g~~~~~~~~~~~~----------~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r--------~----~-- 333 (363)
T TIGR01437 278 ALNTLKGVSASIVQDEAGR----------DIARAEIRFDESELGMTAADVVQALRQGEPAIYTR--------G----Y-- 333 (363)
T ss_pred HHhcCCCeEEEEecCCCCC----------cCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEe--------e----e--
Confidence 8888887654322110000 00112244544110112344444444322111100 0 0
Q ss_pred CChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 352 IPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 352 ~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
....+.+|+++...+ +++++.+.++|.++
T Consensus 334 ---------~~~~~~~~l~~~~~~-~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 334 ---------KANEGIIEIDPRSVT-GGQLDIIVERIREI 362 (363)
T ss_pred ---------eecCCeEEEEeecCC-HHHHHHHHHHHHHh
Confidence 123688999998755 88899999999875
No 200
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.91 E-value=7.5e-23 Score=192.62 Aligned_cols=280 Identities=18% Similarity=0.207 Sum_probs=182.2
Q ss_pred hHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhc----CCC-CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 60 TRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLL----SAG-DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~----~~g-d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
..+++|+.+|+++|.+ +.+++++|+++ + .++..+. .+| +.|++....|++....+ ..++..|++++.++.+
T Consensus 43 ~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~-~~~~~~G~~v~~v~~~ 121 (353)
T TIGR03235 43 AVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPI-RALERNGFTVTYLPVD 121 (353)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHH-HHHHhcCCEEEEEccC
Confidence 3578999999999986 67888888765 6 5555554 356 78888888887655444 3346679999998874
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCC-CcCcEEEEcccc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLP-WGVDIVLYSLTK 205 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~-~~~di~~~S~sK 205 (393)
|++++++.+++++++|++++++||||.+.|+++|.++|+++ |+++++|++++.+.....+. .++|+++.|++|
T Consensus 122 ~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~-~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K 200 (353)
T TIGR03235 122 ESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAH-EAFFHVDAAQVVGKITVDLSADRIDLISCSGHK 200 (353)
T ss_pred CCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHc-CCEEEEEchhhcCCccccccccCCCEEEeehhh
Confidence 78999999988899999999999999999999999999999 99999999998765533333 478999999999
Q ss_pred cccCCCCceEEEEEecChHHHHH--HHHHHH-------hcCCCCCHHHHHHHHhcc----CCHHHHHHHHHHHHHHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQAR--LKFLQN-------SMGVVPSPFDCWLVTRGL----KTLPCRLKEHERGSIEVAKF 272 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~ 272 (393)
++ |++| +|+++.+ ++.... ++.... ......+......+...+ +..+.+.+++.+....+.+.
T Consensus 201 ~~-gp~g--~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~ 276 (353)
T TIGR03235 201 IY-GPKG--IGALVIR-KRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDA 276 (353)
T ss_pred cC-CCCc--eEEEEEc-cCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 97 7988 9999988 443221 111000 001112111111111222 22334455556666666666
Q ss_pred HhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCC
Q psy12791 273 LESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSI 352 (393)
Q Consensus 273 l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~ 352 (393)
|+. ++++.+..+. ....+++.|.+++ ...+.+.+.|+. ++.++.|..|+.... .
T Consensus 277 l~~-~g~~~~~~~~--------------~~~~~i~~~~~~~--~~~~~v~~~L~~-~i~v~~g~~~~~~~~--------~ 330 (353)
T TIGR03235 277 LQT-LGVKLNGDPA--------------ETIPHILNFSIDG--VNSEALIVNLRA-DAAVSTGSACSSSKY--------E 330 (353)
T ss_pred hcc-CCeEEeCCcc--------------cccCCEEEEEeCC--cCHHHHHHHHhC-CeEEEchhhcCCCCC--------C
Confidence 655 4443221111 1124678888754 123344444443 567777766532211 1
Q ss_pred ChhhHhhcCCC----CCeEEEEe
Q psy12791 353 PKETRDALGIT----DNLVRLSV 371 (393)
Q Consensus 353 ~~~~~~~~g~~----~~~iRls~ 371 (393)
+.....++|.. .+.+|+|+
T Consensus 331 ~~~~l~~~g~~~~~~~~~~r~s~ 353 (353)
T TIGR03235 331 PSHVLQAMGLDTDRARGAIRFSW 353 (353)
T ss_pred CCHHHHHcCCCHHHhCccEEEeC
Confidence 22445566665 47889885
No 201
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.91 E-value=4.4e-22 Score=189.05 Aligned_cols=305 Identities=19% Similarity=0.203 Sum_probs=204.4
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---- 131 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---- 131 (393)
.+...++|+++|+++|.++.+++++|++++ .++.++ +++||+|++++++|.+ +...+...|+++++++.+
T Consensus 28 g~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~----~~~~~~~~G~~~~~~~~~~~~~ 103 (380)
T TIGR03588 28 GPTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVA----TANCALYCGAKVDFVDIDPDTG 103 (380)
T ss_pred ChhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHH----HHHHHHHcCCEEEEEecCCCcC
Confidence 467889999999999999899999999998 666677 7899999999999986 345567789999998873
Q ss_pred --CHHHHHhhcC----CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcC----cEEEE
Q psy12791 132 --KIENLIKYIK----PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGV----DIVLY 201 (393)
Q Consensus 132 --d~~~l~~~l~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~----di~~~ 201 (393)
|++++++.++ +++++|+++| ++|...++++|.++|+++ |++||+|++++.+........+. |+.+.
T Consensus 104 ~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~~~~i~~l~~~~-~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~ 179 (380)
T TIGR03588 104 NIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVDMQAIAALAKKH-GLKIIEDASHALGAEYGGKPVGNCRYADATVF 179 (380)
T ss_pred CcCHHHHHHHhhcccCCCceEEEEeC---CCCccCCHHHHHHHHHHc-CCEEEEECCCcccCccCCEeCCCccccceEEE
Confidence 7899999998 6789988654 579999999999999999 99999999999764322222344 99999
Q ss_pred ccc--ccccCCCCceEEEEEecChHHHHHHHHHHHhc-------------------------CCCCCHHHHHHHHhccCC
Q psy12791 202 SLT--KYMNGHSDVVMGATVTNDDSLQARLKFLQNSM-------------------------GVVPSPFDCWLVTRGLKT 254 (393)
Q Consensus 202 S~s--K~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~ 254 (393)
|++ |+++ .+ .+|+++++++++.++++...... ...++...+.+....++.
T Consensus 180 S~~~~K~~~-~~--~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~ 256 (380)
T TIGR03588 180 SFHPVKIIT-TA--EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKK 256 (380)
T ss_pred ecCCCCccc-cc--CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHH
Confidence 987 8884 33 48999988888888876543210 112244455555555666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhcCccccccc
Q psy12791 255 LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESLLIFRCAES 333 (393)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~ 333 (393)
+....++..++...+.+.|...+.+... .+. ... .....+..+.+.. .....+.+.+.|...++...
T Consensus 257 l~~~~~~r~~~~~~~~~~L~~~~~~~~~-~~~-~~~----------~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~ 324 (380)
T TIGR03588 257 LDRFVAKRREIAARYDRLLKDLPYFTPL-TIP-LGS----------KSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQ 324 (380)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccCC-CCC-CCC----------EeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcc
Confidence 7777777788888888888877654311 110 000 0001223333421 11234445555544444443
Q ss_pred cCCccccccCccccc---CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 334 LGGIESLADLPAEMT---HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 334 ~g~~~s~~~~~~~~~---~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.... .+...|.... ...++..+. .....|+|.++..-++++++.+.++++++
T Consensus 325 ~~~~-~~~~~~~~~~~~~~~~~p~a~~----~~~~~l~lP~~~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 325 VHYI-PVHLQPYYRQGFGDGDLPSAEN----FYLAEISLPLHPALTLEQQQRVVETLRKV 379 (380)
T ss_pred cCCc-ccccChhhhccCCcCCCcHHHH----HHhceEEcCCCCCCCHHHHHHHHHHHHHh
Confidence 2211 1111111110 111222221 12588999999999999999999999865
No 202
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.91 E-value=2.5e-22 Score=185.72 Aligned_cols=283 Identities=18% Similarity=0.136 Sum_probs=213.4
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENL 136 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l 136 (393)
.+...+|++.||+++|.+++++++||-.+. .++.++.+++|.|+.....|.+ ....++..+++++.+...|+++|
T Consensus 83 ~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHAS----iidG~rls~a~~~~f~HnD~~~L 158 (388)
T COG0156 83 SDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHAS----IIDGIRLSRAEVRRFKHNDLDHL 158 (388)
T ss_pred cHHHHHHHHHHHHHhCCCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhh----HHHHHHhCCCcEEEecCCCHHHH
Confidence 467889999999999999999999999996 8888999999999998888875 45667788999999999999999
Q ss_pred HhhcCC------CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC---------CC-CcCcEEE
Q psy12791 137 IKYIKP------NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS---------LP-WGVDIVL 200 (393)
Q Consensus 137 ~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~---------~~-~~~di~~ 200 (393)
++.+.+ +.++|+++..-+..|.+.|+++|.+++++| +++++|||+|+.+++... +. ...||++
T Consensus 159 e~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky-~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~ 237 (388)
T COG0156 159 EALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKY-GALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIV 237 (388)
T ss_pred HHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHh-CcEEEEEccccccccCCCCccHHHHhCCCCccceEEE
Confidence 999865 247888899999999999999999999999 999999999998765421 11 2348999
Q ss_pred EcccccccCCCCceEEEEEecChHHHHHHHHHHH--hcCCCCCHHHHHHHHhccC---CHHHHHHHHHHHHHHHHHHHhh
Q psy12791 201 YSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN--SMGVVPSPFDCWLVTRGLK---TLPCRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 201 ~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~ 275 (393)
+|++|.+++. +||+.++ ..+.+.++.... .+.+..+|..+..+...++ ....+++++.++...+...++.
T Consensus 238 gTlsKAlGs~----Gg~v~g~-~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~ 312 (388)
T COG0156 238 GTLGKALGSS----GGYIAGS-AALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKA 312 (388)
T ss_pred EEchhhhccc----CceeeCc-HHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999432 7888887 888887765432 3456667776655554443 3445677777777666654443
Q ss_pred CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChh
Q psy12791 276 HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKE 355 (393)
Q Consensus 276 ~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~ 355 (393)
... +.. ....+++.+.+ ++++.+..+...+...++.+.. +.+|...
T Consensus 313 ~~~------~~~-------------~s~s~I~pv~~-gd~~~a~~~s~~l~~~Gi~v~~------i~~PTVp-------- 358 (388)
T COG0156 313 LGL------VLL-------------PSESPIIPVIL-GDEERALEASRALLEEGIYVSA------IRPPTVP-------- 358 (388)
T ss_pred cCC------ccC-------------CCCCCeeeeEe-CCHHHHHHHHHHHHHCCeeEee------ecCCCCC--------
Confidence 211 100 11247888888 6777777777776654443322 2233210
Q ss_pred hHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 356 TRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 356 ~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.....||++++..+++++|+.+.++|.++
T Consensus 359 ------~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 359 ------KGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred ------CCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 11478999999999999999999999875
No 203
>KOG1549|consensus
Probab=99.91 E-value=3.2e-23 Score=188.93 Aligned_cols=164 Identities=20% Similarity=0.256 Sum_probs=136.6
Q ss_pred ccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHh-cCCCC----eEEEcCCCccchHHHHHHhcccCCcE
Q psy12791 53 YSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHL-LSAGD----HIISGDDVYGGTYRYFAQVAPKIGLE 124 (393)
Q Consensus 53 y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~-~~~gd----~vl~~~~~y~~~~~~~~~~~~~~g~~ 124 (393)
|..-..+..++.|+.+|+++|++ ..|+||+|+++ + .++..+ ...+| +|++....|++....+ ..++..|++
T Consensus 79 y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~-~~l~~~g~~ 157 (428)
T KOG1549|consen 79 YGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSC-RALQEEGLE 157 (428)
T ss_pred cchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHH-HHHHhcCeE
Confidence 44334556789999999999997 45999999876 6 555554 33455 8999999998765444 456778899
Q ss_pred EEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcE
Q psy12791 125 VDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDI 198 (393)
Q Consensus 125 v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di 198 (393)
++++|.. |++.+++.++++|++|.+.+.||.+|.++|+++|.++|++. ++.+++|.||+.+...... +.++|+
T Consensus 158 Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~-~v~v~~DaAQavG~i~vDV~eln~D~ 236 (428)
T KOG1549|consen 158 VTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPVKEIVKICREE-GVQVHVDAAQAVGKIPVDVQELNADF 236 (428)
T ss_pred EEEeccCccccccHHHHHHhcCCCceEEEEEecccCccccccHHHHHHHhCcC-CcEEEeehhhhcCCccccHHHcCchh
Confidence 9999986 78999999999999999999999999999999999999999 9999999999976653332 268999
Q ss_pred EEEcccccccCCCCceEEEEEec
Q psy12791 199 VLYSLTKYMNGHSDVVMGATVTN 221 (393)
Q Consensus 199 ~~~S~sK~~~G~~G~r~G~~~~~ 221 (393)
+..|.|||+ |++| +|+++++
T Consensus 237 ~s~s~HK~y-gp~~--iGaLYvr 256 (428)
T KOG1549|consen 237 LSISAHKIY-GPPG--IGALYVR 256 (428)
T ss_pred eeeeccccc-CCCc--ceEEEEc
Confidence 999999999 7999 9999998
No 204
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=2.1e-23 Score=199.47 Aligned_cols=319 Identities=16% Similarity=0.115 Sum_probs=200.1
Q ss_pred CCCCC-CCC--CCCCcc-CCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCC--cEEE-eccHHHHH-HHHHH
Q psy12791 22 DQWRS-QCV--IPPIIL-STTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLEEAK--HGLC-YSSGLGAV-TAVTH 92 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~~-~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~~~~--~~i~-~~~G~~al-~~~~~ 92 (393)
.+++| .+. .+++++ .+.+.+++.+.+.. .+...+|+++...+|.+.++++++.+ +.++ +++|++++ .++..
T Consensus 43 ~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~ 122 (398)
T PRK03244 43 KEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKL 122 (398)
T ss_pred CEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHH
Confidence 35566 222 567777 35666555443222 12223466777789999999998754 4455 45566667 55554
Q ss_pred hcCCC-CeEEEcCCCccchHHHHHHh---------cccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC-
Q psy12791 93 LLSAG-DHIISGDDVYGGTYRYFAQV---------APKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD- 161 (393)
Q Consensus 93 ~~~~g-d~vl~~~~~y~~~~~~~~~~---------~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~- 161 (393)
...+| +.|+..+++|++........ +...+.++..+|..|++++++.+.+++++|+++.++||+|.++|
T Consensus 123 ~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~ 202 (398)
T PRK03244 123 ARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAVFLEPIQGEAGVVPPP 202 (398)
T ss_pred HHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCCeEEEEEecccCCCCCcCCC
Confidence 33355 56777778887642211111 11122356667777899999988778999999999999999998
Q ss_pred ---HHHHHHHHHhCCCcEEEEeCccCccccc------CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH
Q psy12791 162 ---VKAISAVVKQHPDILLVLDNTFLTAYYQ------KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL 232 (393)
Q Consensus 162 ---~~~l~~l~~~~~~~~livDea~~~~~~~------~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~ 232 (393)
+++|.++|+++ |+++|+||+|..+... .......|++ +++|++ | +|+|+|+++++ +++.+.+...
T Consensus 203 ~~~l~~l~~l~~~~-~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~--t~sK~l-~-~G~~ig~~~~~-~~~~~~~~~~ 276 (398)
T PRK03244 203 AGYLAAAREITDRH-GALLVLDEVQTGIGRTGAWFAHQHDGVTPDVV--TLAKGL-G-GGLPIGACLAF-GPAADLLTPG 276 (398)
T ss_pred HHHHHHHHHHHHHc-CCEEEEeccccCCcccchHHhhhhhCCCCCEE--EEchhh-h-CCcccEEEEEc-HHHHhhccCC
Confidence 88999999999 9999999999753110 1112235665 778999 5 68999999998 7777766432
Q ss_pred HHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEE
Q psy12791 233 QNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFY 310 (393)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........++..+..+...++.+. ...++..+..+.+.+.|+++. ++.. ...++.|.++++.
T Consensus 277 ~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~------~~~~----------~~v~g~g~~~~i~ 340 (398)
T PRK03244 277 LHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEALG------HPLV----------DHVRGRGLLLGIV 340 (398)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcC------CCce----------eeEeeccEEEEEE
Confidence 222222345666665555544322 234444555566777776531 1100 0112346788999
Q ss_pred EcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 311 VNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 311 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
++. +....+.+.+...++.+... ..++||++++...++++++.+.++|+++
T Consensus 341 ~~~--~~~~~~~~~l~~~Gv~~~~~---------------------------~~~~iR~~p~~~~t~~~i~~~~~~l~~~ 391 (398)
T PRK03244 341 LTA--PVAKAVEAAAREAGFLVNAV---------------------------APDVIRLAPPLIITDAQVDAFVAALPAI 391 (398)
T ss_pred Eec--cHHHHHHHHHHHCCeEEeec---------------------------CCCEEEEECCCcCCHHHHHHHHHHHHHH
Confidence 842 24555666655444333210 1478999999988888888888888765
Q ss_pred h
Q psy12791 391 C 391 (393)
Q Consensus 391 ~ 391 (393)
.
T Consensus 392 l 392 (398)
T PRK03244 392 L 392 (398)
T ss_pred H
Confidence 3
No 205
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.91 E-value=2.7e-22 Score=192.07 Aligned_cols=282 Identities=13% Similarity=0.033 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHhCCC--cEEEeccHHHH-H-HHHHHhcCC--CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 61 RRNLERCIASLEEAK--HGLCYSSGLGA-V-TAVTHLLSA--GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 61 ~~~lr~~la~~~~~~--~~i~~~~G~~a-l-~~~~~~~~~--gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
.+++++.+++++|.+ +.+++++|+++ . .+....+.+ ||+|+++++.|+++...+....+..|++++.++.+
T Consensus 66 ~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~ 145 (398)
T cd00613 66 LFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGG 145 (398)
T ss_pred HHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCC
Confidence 456777788888876 45566667665 3 334445565 99999999999986555544445556899888774
Q ss_pred --CHHHHHhhcCCCCcEEEEecCCCCcccccCH-HHHHHHHHhCCCcEEEEeCccCccccc-CCCCCcCcEEEEcccccc
Q psy12791 132 --KIENLIKYIKPNTKMVWIENPTNPLMTVFDV-KAISAVVKQHPDILLVLDNTFLTAYYQ-KSLPWGVDIVLYSLTKYM 207 (393)
Q Consensus 132 --d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~-~~l~~l~~~~~~~~livDea~~~~~~~-~~~~~~~di~~~S~sK~~ 207 (393)
|++++++.+.+++++|++++|+ |+|.+.+. ++|.++|+++ |+++|+|+++..+... .+...++|+++.|+||++
T Consensus 146 ~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~-g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K~~ 223 (398)
T cd00613 146 TVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSA-GALVYVDGDNLNLTGLKPPGEYGADIVVGNLQKTG 223 (398)
T ss_pred CcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhc-CCEEEEEeccccccCCCChHHcCCCEEEeeccccC
Confidence 6799999998899999999986 89999985 9999999999 9999999988653321 222357899999999998
Q ss_pred cCC---CCceEEEEEecChHHHHHHHHHHH-------------------------hcC----CCCCHHHHH---HHHhcc
Q psy12791 208 NGH---SDVVMGATVTNDDSLQARLKFLQN-------------------------SMG----VVPSPFDCW---LVTRGL 252 (393)
Q Consensus 208 ~G~---~G~r~G~~~~~~~~~~~~~~~~~~-------------------------~~~----~~~~~~~~~---~~~~~~ 252 (393)
++ .|.++||++.+ +++.+.+..... ..+ ...++.... ..+..+
T Consensus 224 -~p~g~Ggp~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~ 301 (398)
T cd00613 224 -VPHGGGGPGAGFFAVK-KELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYL 301 (398)
T ss_pred -CCCCCCCCceeEEEEh-hhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHh
Confidence 33 25679999997 666665311000 000 000111111 111111
Q ss_pred --CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-HHHHHHHHHhcCccc
Q psy12791 253 --KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-AEETRIFLESLLIFR 329 (393)
Q Consensus 253 --~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~ 329 (393)
+.++...++..++...+.+.|++++... .+. ......+++.++.. ......+.+.|...+
T Consensus 302 ~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~---~~~--------------~~~~~~v~~~~~~~~~~~~~~~~~~L~~~g 364 (398)
T cd00613 302 GPEGLKEIAERAHLNANYLAKRLKEVGGVL---PFN--------------GPFFHEFVLRLPPLYGIRAEDLAKALIDGG 364 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---cCC--------------CCeeEEEEEEcCCcchHHHHHHHHhhhhcC
Confidence 2234455666777777888887654321 111 11123456666421 234566666665433
Q ss_pred cccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 330 CAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 330 ~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
+.... .. + ...+.||+|++.++++++++.+.++|
T Consensus 365 i~~~~------~~-~-----------------~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 365 FHAPT------MY-L-----------------PVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred ccccc------cc-c-----------------CCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 22100 00 0 12578999999999999999988764
No 206
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.91 E-value=4.4e-22 Score=182.64 Aligned_cols=306 Identities=21% Similarity=0.232 Sum_probs=213.1
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---- 131 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---- 131 (393)
-+...++++++|+++|++.++.++||++|+ .++.++ +.+||+|++++.+|.+|. +..-..|+++++++.+
T Consensus 33 G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATa----n~i~~~Ga~PVFvDid~~T~ 108 (374)
T COG0399 33 GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATA----NAVLLVGAKPVFVDIDPDTL 108 (374)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHH----HHHHHcCCeEEEEecCCccc
Confidence 377889999999999999999999999998 666644 799999999999998753 4455679999999987
Q ss_pred --CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCc--CcEEEEcc--cc
Q psy12791 132 --KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWG--VDIVLYSL--TK 205 (393)
Q Consensus 132 --d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~--~di~~~S~--sK 205 (393)
|++.++++++++||+|+..|-. |..+++++|.++|++| |++||+|.+++.+.....-..| .|+.+.|| +|
T Consensus 109 nid~~~ie~aIt~~tKAIipVhl~---G~~~dm~~i~~la~~~-~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K 184 (374)
T COG0399 109 NIDPDLIEAAITPRTKAIIPVHLA---GQPCDMDAIMALAKRH-GLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATK 184 (374)
T ss_pred CCCHHHHHHHcccCCeEEEEehhc---cCCCCHHHHHHHHHHc-CCeEEEEcchhccCeecCcccccccceEEEEecCCC
Confidence 8999999999999999977666 9999999999999999 9999999999976543322222 47888888 78
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHHh----------------cCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQNS----------------MGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEV 269 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (393)
.+. .| -+|.++++++++.++++..+.. +...++..++++....++.+++..++..+.++.+
T Consensus 185 ~it--tg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y 261 (374)
T COG0399 185 NLT--TG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIY 261 (374)
T ss_pred Ccc--cc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 883 33 5999999999999998765532 1122345667777788888888888888888888
Q ss_pred HHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCccccc-
Q psy12791 270 AKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMT- 348 (393)
Q Consensus 270 ~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~- 348 (393)
.+.|++.+.+. .|.......+ .-.+..+.++......+.+++.|+..++.. ....-.+..++.-..
T Consensus 262 ~~~l~~~~~~~---~p~~~~~~~~---------~~~~~~i~~~~~~~~R~~l~~~L~~~gi~~-~~~~~P~~~~~~~~~~ 328 (374)
T COG0399 262 AEALKGLPGIT---LPPEPDGAVH---------AWHLYTILVDEEGISRDALMESLKEAGVGA-VVYFRPLHLQPAYRQL 328 (374)
T ss_pred HHHhhcCCCcc---ccCCCCCcee---------eeeeeEEEecCCCCCHHHHHHHHHhCCCCc-eEEeeccccchhhhcc
Confidence 88888776532 2221111000 012344444321133444555554444331 111111111110000
Q ss_pred ----CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 349 ----HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 349 ----~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
...+|..+. .....+.|-++..-++++++++.++++++.
T Consensus 329 ~~~~~~~lp~ae~----~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~ 371 (374)
T COG0399 329 GYFPEGDLPNAED----LSERILSLPLHPNLSEEDVDRVIEALKEVL 371 (374)
T ss_pred cccccCCCchHHH----HhhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 012222222 236788888888889999999999998765
No 207
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.91 E-value=2.3e-22 Score=190.88 Aligned_cols=277 Identities=17% Similarity=0.104 Sum_probs=182.1
Q ss_pred chHHHHHHHHHHHhCCC-cE-EEeccHHHHH-HHHHHhc------CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC
Q psy12791 59 PTRRNLERCIASLEEAK-HG-LCYSSGLGAV-TAVTHLL------SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD 129 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~-~~-i~~~~G~~al-~~~~~~~------~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~ 129 (393)
...+++++.+|+++|.+ .. +++++|++++ .++.++. ++||+|++++++|.+ +...++..|++++.++
T Consensus 59 ~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~----~~~~~~~~G~~~~~v~ 134 (373)
T TIGR03812 59 KIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFS----FEKAAEMLGLELRYAP 134 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHH----HHHHHHHcCCeEEEEe
Confidence 34578999999999986 34 5555555555 4443332 467899999999974 6667788899999988
Q ss_pred CC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc--------CCCC---
Q psy12791 130 LR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ--------KSLP--- 193 (393)
Q Consensus 130 ~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~--------~~~~--- 193 (393)
.+ |++++++.+.+++..+++.+|+||||.+.|+++|.++|+++ ++++++|++|+.+... ..++
T Consensus 135 ~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~-~~~livD~a~~~~~~~~~~~~~~~~~~d~~~ 213 (373)
T TIGR03812 135 LDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALEN-GIYLHVDAAFGGFVIPFLKKGYNPPPFDFSL 213 (373)
T ss_pred eCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHc-CCeEEEEcCchhHHHHHHhcCCCCCCccccC
Confidence 64 79999999887775555556899999999999999999999 9999999999864321 1222
Q ss_pred CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCC--------CCCHHHHHHHHhccC-----CHHHHHH
Q psy12791 194 WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGV--------VPSPFDCWLVTRGLK-----TLPCRLK 260 (393)
Q Consensus 194 ~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-----~~~~~~~ 260 (393)
.+.|.+..|.+|+. .++.+.|+++..++++++.++....+... ..+......+...++ .++...+
T Consensus 214 ~~~d~~~~s~~K~~--~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~ 291 (373)
T TIGR03812 214 PGVQSITIDPHKMG--LSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVA 291 (373)
T ss_pred CCCCEEEECccccC--CCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHH
Confidence 26788889999964 34456776665447777766422221111 111122222222222 2344566
Q ss_pred HHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCcccc
Q psy12791 261 EHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESL 340 (393)
Q Consensus 261 ~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~ 340 (393)
+..++++.+.+.|+.++... + .+. ..+++.|.++ +.. .+.+.|...++.++.+
T Consensus 292 ~~~~~~~~l~~~L~~~g~~~-~-~~~----------------~~~~v~~~~~-~~~---~v~~~L~~~gi~v~~~----- 344 (373)
T TIGR03812 292 ECMENTRYLVEELKKIGFEP-V-IEP----------------VLNIVAFEVD-DPE---EVRKKLRDRGWYVSVT----- 344 (373)
T ss_pred HHHHHHHHHHHHHHhCCCeE-E-cCC----------------CceEEEEEeC-CHH---HHHHHHHHCCceeccC-----
Confidence 77777888888887654211 2 111 1357777774 332 3444443323333211
Q ss_pred ccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 341 ADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..+++||+|++..+++++++.+.++|+++
T Consensus 345 ---------------------~~~~~iRis~~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 345 ---------------------RCPKALRIVVMPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred ---------------------CCCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence 01468999999999999999999999764
No 208
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.91 E-value=1.1e-21 Score=185.68 Aligned_cols=307 Identities=19% Similarity=0.207 Sum_probs=199.3
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
..|...+|++++|+++|.++.+++++|++++ .++.++ +++||+|++++++|.++ ...+...|++++.++.+
T Consensus 31 ~g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~----~~~~~~~G~~~v~vd~~~~~ 106 (379)
T PRK11658 31 TGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVST----LNMIVLLGATPVMVDVDRDT 106 (379)
T ss_pred CCHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHH----HHHHHHcCCEEEEEecCCCc
Confidence 3578899999999999999899999999998 777777 78999999999999864 34456789999999864
Q ss_pred ---CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC--CC-CCcCcEEEEcccc
Q psy12791 132 ---KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK--SL-PWGVDIVLYSLTK 205 (393)
Q Consensus 132 ---d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~--~~-~~~~di~~~S~sK 205 (393)
|++++++.+++++++|+ |+|++|...|+++|.++|+++ |+++|+|++|+.+.... .. ..+.+++..+.+|
T Consensus 107 ~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d~~~i~~~a~~~-gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K 182 (379)
T PRK11658 107 LMVTPEAIEAAITPRTKAII---PVHYAGAPADLDAIRAIGERY-GIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIK 182 (379)
T ss_pred CCcCHHHHHHhcccCCeEEE---EeCCCCCcCCHHHHHHHHHHc-CCeEEEECCCccCCeECCeecCCCCCEEEeCCCCC
Confidence 78999999998999987 566789999999999999999 99999999998654322 12 2344444444456
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHHhc----------------------C--CCCCHHHHHHHHhccCCHHHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQNSM----------------------G--VVPSPFDCWLVTRGLKTLPCRLKE 261 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~----------------------~--~~~~~~~~~~~~~~~~~~~~~~~~ 261 (393)
.+. +-++|+++++++++.++++..+..- | ..++.+++++....++.++...++
T Consensus 183 ~l~---~g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~ 259 (379)
T PRK11658 183 NIT---CAEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNAR 259 (379)
T ss_pred cCc---ccCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 653 3369999988788988887544210 1 112344555555556666666666
Q ss_pred HHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC--HHHHHHHHHhcCccccccccCCccc
Q psy12791 262 HERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG--AEETRIFLESLLIFRCAESLGGIES 339 (393)
Q Consensus 262 ~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~g~~~s 339 (393)
..+..+.+.+.|.+++... +..|.... .....++.+.+... ....+.+.+.|+..++...... ..
T Consensus 260 r~~~a~~~~~~L~~~~~~~-~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~-~~ 326 (379)
T PRK11658 260 RREIAARYLQALADLPFQP-LSLPAWPH-----------QHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHF-RA 326 (379)
T ss_pred HHHHHHHHHHHhcCCCCcc-CcCCCCCC-----------ceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccC-cC
Confidence 6777777778777654321 11111000 00013344555211 1134455555554444432211 11
Q ss_pred cccCcccc---cCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 340 LADLPAEM---THKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 340 ~~~~~~~~---~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+...+... ....+|..+. .....|-|-++..-++++++.+.++++++.
T Consensus 327 ~~~~~~~~~~~~~~~~p~~~~----~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 327 AHTQKYYRERFPTLSLPNTEW----NSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred cccChhhhccCCCCCChHHHH----HHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 11111100 0111222222 125677788888888999999999998764
No 209
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.91 E-value=3.2e-22 Score=192.43 Aligned_cols=327 Identities=12% Similarity=0.069 Sum_probs=198.3
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCC----CccccCC--CCchHHHH----HHHHHHHhCCCc-EEEeccHHHHH-H
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQ----GFEYSRS--NNPTRRNL----ERCIASLEEAKH-GLCYSSGLGAV-T 88 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~----~~~y~~~--~~~~~~~l----r~~la~~~~~~~-~i~~~~G~~al-~ 88 (393)
.+.++ ++++|| +++.+.+++...+.. ....+++ +.+....+ ++.+++++|.+. .+++++|++++ .
T Consensus 25 ~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sgt~al~~ 102 (416)
T PRK00011 25 EEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSGSQANAA 102 (416)
T ss_pred hcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCchHHHHH
Confidence 34455 788888 455555554332100 1111121 12233344 447899999884 47778999887 7
Q ss_pred HHHHhcCCCCeEEEcCCCccchHHHH-HHhcccCCcEEEeeCCC------CHHHHHhhcCC-CCcEEEEecCCCCccccc
Q psy12791 89 AVTHLLSAGDHIISGDDVYGGTYRYF-AQVAPKIGLEVDFVDLR------KIENLIKYIKP-NTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 89 ~~~~~~~~gd~vl~~~~~y~~~~~~~-~~~~~~~g~~v~~~~~~------d~~~l~~~l~~-~~~~v~l~~p~nptG~~~ 160 (393)
++.+++++||+|+++.|+|++.+... ...+...|++++.++.+ |++++++.+++ ++++|+++++++ |...
T Consensus 103 ~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~--~~~~ 180 (416)
T PRK00011 103 VYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASAY--SRPI 180 (416)
T ss_pred HHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCcC--CCcc
Confidence 77788899999999999997532111 11123456788877653 78999998864 789999876654 4667
Q ss_pred CHHHHHHHHHhCCCcEEEEeCccCcccc-----cCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh
Q psy12791 161 DVKAISAVVKQHPDILLVLDNTFLTAYY-----QKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS 235 (393)
Q Consensus 161 ~~~~l~~l~~~~~~~~livDea~~~~~~-----~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~ 235 (393)
|+++|.++|+++ |+++|+|++|..+.. ..++. +.|++++|+||+++ |.|+||++++++++.++++.....
T Consensus 181 ~~~~I~~la~~~-~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~l~---g~~gg~i~~~~~~~~~~l~~~~~~ 255 (416)
T PRK00011 181 DFKRFREIADEV-GAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKTLR---GPRGGLILTNDEELAKKINSAVFP 255 (416)
T ss_pred CHHHHHHHHHHc-CCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcCCC---CCCceEEEeCCHHHHHHHHHHhCc
Confidence 999999999999 999999999865432 12333 67899999999874 457999999767888888655432
Q ss_pred cC-CCC-CHHHHHHHH---hcc-CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEE
Q psy12791 236 MG-VVP-SPFDCWLVT---RGL-KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSF 309 (393)
Q Consensus 236 ~~-~~~-~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
.. ... ....+.+.. ..+ +.+..++++..++++.+.+.|++. ++. +. +. .....++++
T Consensus 256 ~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~~--------------~~~~~~~~i 318 (416)
T PRK00011 256 GIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFR-VV-SG--------------GTDNHLVLV 318 (416)
T ss_pred cccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCe-ee-ec--------------CCCCeEEEE
Confidence 21 111 111111111 111 234556777888888999998864 332 11 11 011367788
Q ss_pred EEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecC----CChHHHHHHHHH
Q psy12791 310 YVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV----EGYTDLIADLDQ 385 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~----~~~~~~i~~l~~ 385 (393)
.+.+.......+.+.|...++.+..+.. .....++ ..+..+|++... ..++++++.+.+
T Consensus 319 ~~~~~~~~~~~~~~~L~~~GI~v~~~~~-p~~~~~~----------------~~~~~~Ri~~~~~~~~~~t~~di~~l~~ 381 (416)
T PRK00011 319 DLRSKGLTGKEAEAALEEANITVNKNAV-PFDPRSP----------------FVTSGIRIGTPAITTRGFKEAEMKEIAE 381 (416)
T ss_pred eCcccCCCHHHHHHHHHHcCcEEccCcC-CCCCCCC----------------CCCCceEecCHHHhhcCcCHHHHHHHHH
Confidence 7732111223444555444444432211 0000000 113568986533 245788888888
Q ss_pred HHHHhh
Q psy12791 386 ALRKAC 391 (393)
Q Consensus 386 al~~~~ 391 (393)
+|+++.
T Consensus 382 ~l~~~~ 387 (416)
T PRK00011 382 LIADVL 387 (416)
T ss_pred HHHHHH
Confidence 887653
No 210
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.90 E-value=9.3e-23 Score=194.00 Aligned_cols=318 Identities=16% Similarity=0.114 Sum_probs=196.8
Q ss_pred CCCCC-CCC--CCCCccC-CeeeeCCCCCCCCC-ccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh--
Q psy12791 22 DQWRS-QCV--IPPIILS-TTFKQNTPGQPPQG-FEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-- 93 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~~~-~~~~~~~~~~~~~~-~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-- 93 (393)
.+++| .++ .+|++.+ +.+.+++.+.+... .....|+.+...+|++++++++|.++.+++++|++++ .++..+
T Consensus 27 ~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~~~~~ 106 (379)
T TIGR00707 27 KEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALKLARK 106 (379)
T ss_pred CEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHH
Confidence 35567 333 5788776 45554443332211 1123456788999999999999988777777788876 444422
Q ss_pred -cC----CCCeEEEcCCCccchHHHHHHhc---------ccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 94 -LS----AGDHIISGDDVYGGTYRYFAQVA---------PKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 94 -~~----~gd~vl~~~~~y~~~~~~~~~~~---------~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
.. ++|+|++++|+|++......... .....++..++..|++++++.+.+++++|++++++||+|..
T Consensus 107 ~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~ 186 (379)
T TIGR00707 107 YTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVN 186 (379)
T ss_pred HhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCc
Confidence 22 37999999999975321111110 01112234445558999999998889999998777788865
Q ss_pred c-C---HHHHHHHHHhCCCcEEEEeCccCccccc-C--C---CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHH
Q psy12791 160 F-D---VKAISAVVKQHPDILLVLDNTFLTAYYQ-K--S---LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 160 ~-~---~~~l~~l~~~~~~~~livDea~~~~~~~-~--~---~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~ 229 (393)
. + +++|.++|+++ ++++|+||+|.++... . + .....|++ ++||.+ | +|+|+||++++ +++++.+
T Consensus 187 ~~~~~~l~~i~~l~~~~-~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~-~-~G~riG~~~~~-~~~~~~~ 260 (379)
T TIGR00707 187 PASAEFLKALREICKDK-DALLIFDEVQTGIGRTGKFFAYEHYGIEPDII--TLAKGL-G-GGVPIGATLAK-EEVAEAF 260 (379)
T ss_pred cCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccchhhhHHhcCCCCCEE--EEcccc-c-CCcccEEEEEc-HHHHhhh
Confidence 3 3 88999999999 9999999999854221 1 1 11234544 689999 6 89999999997 7888877
Q ss_pred HHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceE
Q psy12791 230 KFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGML 307 (393)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 307 (393)
...........++..+..+...++.+. ...+...++.+.+.+.|++... . . ... ...+.|.++
T Consensus 261 ~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~-~---~~~----------~~~~~g~~~ 325 (379)
T TIGR00707 261 TPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGK-N-Y---PNK----------EVRGKGLML 325 (379)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-h-C---CCC----------ccccCceEE
Confidence 542221222345555555554443221 2344555556666666654211 0 0 000 011235678
Q ss_pred EEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 308 SFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
++.++.+ ...+.+.+...++.+.++ ..+++|++++...++++++.+.++|
T Consensus 326 ~~~~~~~---~~~~~~~l~~~Gv~v~~~---------------------------~~~~lRi~~~~~~t~~~i~~~~~~l 375 (379)
T TIGR00707 326 GIELEAP---CKDIVKKALEKGLLVNCA---------------------------GPKVLRFLPPLIITKEEIDEAVSAL 375 (379)
T ss_pred EEEecCc---HHHHHHHHHHCCcEEeeC---------------------------CCCEEEEECCCcCCHHHHHHHHHHH
Confidence 8888433 345555555444443321 1378999999988888888888888
Q ss_pred HHh
Q psy12791 388 RKA 390 (393)
Q Consensus 388 ~~~ 390 (393)
+++
T Consensus 376 ~~~ 378 (379)
T TIGR00707 376 EEA 378 (379)
T ss_pred HHh
Confidence 754
No 211
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.90 E-value=1.2e-21 Score=185.91 Aligned_cols=277 Identities=16% Similarity=0.102 Sum_probs=185.5
Q ss_pred HHHHHHHHHHHhCCCc-E-EEeccHHHHH-HHHHHhc----CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--
Q psy12791 61 RRNLERCIASLEEAKH-G-LCYSSGLGAV-TAVTHLL----SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-- 131 (393)
Q Consensus 61 ~~~lr~~la~~~~~~~-~-i~~~~G~~al-~~~~~~~----~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-- 131 (393)
..++++.+|+++|.++ . +++++|++++ .++..+. +++|+|++++++|.+ +...++..|++++.++.+
T Consensus 61 ~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s----~~~~~~~~g~~~~~v~~~~~ 136 (371)
T PRK13520 61 EEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFS----FDKAADMLGVELRRAPLDDD 136 (371)
T ss_pred HHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHH----HHHHHHHcCceEEEecCCCC
Confidence 3689999999999863 3 4544555566 5544443 257899999999874 566677889999998864
Q ss_pred ---CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc---CC--CC---CcCcEEE
Q psy12791 132 ---KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ---KS--LP---WGVDIVL 200 (393)
Q Consensus 132 ---d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~---~~--~~---~~~di~~ 200 (393)
|++++++.+++++++|++++++|+||.+.|+++|.++|+++ |+++++|++|+.+... .. ++ .+.|.+.
T Consensus 137 ~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~-g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~ 215 (371)
T PRK13520 137 YRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIALEN-GIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSIT 215 (371)
T ss_pred CcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHc-CCCEEEEecchhHHHHhhcCCCCccccCCCCceEE
Confidence 79999999988888888889999999999999999999999 9999999999865421 11 11 3678888
Q ss_pred EcccccccCCCCceEEEEEecChHHHHHHHHHHHhcC--------CCCCHHHHHHHHhccC-----CHHHHHHHHHHHHH
Q psy12791 201 YSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMG--------VVPSPFDCWLVTRGLK-----TLPCRLKEHERGSI 267 (393)
Q Consensus 201 ~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 267 (393)
.|.+|+. .++.++|+++..++++.+.+.....+.. +..+......+...++ .+..++++..++.+
T Consensus 216 ~s~~K~~--~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~ 293 (371)
T PRK13520 216 IDPHKMG--LAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTR 293 (371)
T ss_pred ECCcccc--CccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHH
Confidence 9999975 3445688888765777776542211111 0111112222222222 23445666677777
Q ss_pred HHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccc
Q psy12791 268 EVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEM 347 (393)
Q Consensus 268 ~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~ 347 (393)
.+.+.|+.. ++..+..+ ..+++.+.++ +.+ .+.+.|...++.++.+.
T Consensus 294 ~l~~~L~~~-g~~~~~~~-----------------~~~~v~~~~~-~~~---~v~~~L~~~gi~v~~~~----------- 340 (371)
T PRK13520 294 WLAEELKER-GFEPVIEP-----------------VLNIVAFDDP-NPD---EVREKLRERGWRVSVTR----------- 340 (371)
T ss_pred HHHHHHHhC-CCEEecCC-----------------CceEEEEecC-CHH---HHHHHHHHCCceeccCC-----------
Confidence 788888765 33212111 1357777774 333 33333332233332210
Q ss_pred cCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 348 THKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 348 ~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
.++++|+|++..+++++++.+.++|+++.+
T Consensus 341 ---------------~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 341 ---------------CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred ---------------CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 146899999999999999999999987654
No 212
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.90 E-value=1.5e-21 Score=187.07 Aligned_cols=293 Identities=15% Similarity=0.108 Sum_probs=184.0
Q ss_pred CchHHHHHH----HHHHHhCCCc-EEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHH-HHhcccCCcEEEeeCC
Q psy12791 58 NPTRRNLER----CIASLEEAKH-GLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYF-AQVAPKIGLEVDFVDL 130 (393)
Q Consensus 58 ~~~~~~lr~----~la~~~~~~~-~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~-~~~~~~~g~~v~~~~~ 130 (393)
.+...++++ .+++++|.+. .+++++|++++ .++.+++++||+|++++|+|++..... ...++..|.++..++.
T Consensus 60 ~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 139 (402)
T cd00378 60 CEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPY 139 (402)
T ss_pred chHHHHHHHHHHHHHHHHhCCCceeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecC
Confidence 344444444 5678899874 56667898887 777888999999999999997532111 1125567876655543
Q ss_pred --C------CHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccc-----cCCCCCcC
Q psy12791 131 --R------KIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYY-----QKSLPWGV 196 (393)
Q Consensus 131 --~------d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~-----~~~~~~~~ 196 (393)
+ |++++++.+. +++++|++++|+|| ...|+++|.++|+++ |+++|+|++|..+.. ..++. +.
T Consensus 140 ~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~~~~~~I~~l~~~~-~~~li~D~a~~~g~~~~g~~~~~~~-~~ 215 (402)
T cd00378 140 GVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RPIDFKRFREIADEV-GAYLLVDMAHVAGLVAGGVFPNPLP-GA 215 (402)
T ss_pred CcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CCcCHHHHHHHHHhc-CCEEEEEccchhhhhhcccCCCccc-CC
Confidence 2 7899999885 57999999998876 567999999999999 999999999754321 12233 57
Q ss_pred cEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc-CCCCCHHHHHH----HHhccC-CHHHHHHHHHHHHHHHH
Q psy12791 197 DIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM-GVVPSPFDCWL----VTRGLK-TLPCRLKEHERGSIEVA 270 (393)
Q Consensus 197 di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~l~ 270 (393)
|++++|+||++. |.|+||++++++++.+.++...... .+......... +....+ ....+++++.+++..+.
T Consensus 216 dv~~~s~sK~l~---G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 292 (402)
T cd00378 216 DVVTTTTHKTLR---GPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALA 292 (402)
T ss_pred cEEEeccccCCC---CCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 899999999874 4579999998558888876544321 11111111111 111222 34456677778888888
Q ss_pred HHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCC
Q psy12791 271 KFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHK 350 (393)
Q Consensus 271 ~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~ 350 (393)
+.|.++ ++..+..|. .+.++|+.+++.......+.+.+...++.+..+.. |.... .
T Consensus 293 ~~L~~~-g~~~~~~~~----------------~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~------p~~~~-~ 348 (402)
T cd00378 293 EALKER-GFKVVSGGT----------------DNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTL------PWDPS-S 348 (402)
T ss_pred HHHHhC-CCeEeecCC----------------CCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcC------CCCCC-C
Confidence 888765 333221111 14678888842111122333334333444432111 10000 0
Q ss_pred CCChhhHhhcCCCCCeEEEEecCCC----hHHHHHHHHHHHHHhh
Q psy12791 351 SIPKETRDALGITDNLVRLSVGVEG----YTDLIADLDQALRKAC 391 (393)
Q Consensus 351 ~~~~~~~~~~g~~~~~iRls~~~~~----~~~~i~~l~~al~~~~ 391 (393)
......+|++++..+ ++++++.+.+.|+++.
T Consensus 349 ----------~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~ 383 (402)
T cd00378 349 ----------PFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARAL 383 (402)
T ss_pred ----------CCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 012578999998755 5777888888887653
No 213
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.90 E-value=3.3e-21 Score=182.35 Aligned_cols=280 Identities=17% Similarity=0.095 Sum_probs=194.2
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh--------------cCCCCeEEEcCCCccchHHHHHHhcccC-C
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL--------------LSAGDHIISGDDVYGGTYRYFAQVAPKI-G 122 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~--------------~~~gd~vl~~~~~y~~~~~~~~~~~~~~-g 122 (393)
....+|+++||+++|.++++++++|..|. .++.++ ...+|.|+.....|.+.+.-.. ..+.. +
T Consensus 147 ~~h~~LE~~LA~f~g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~-ls~~~~~ 225 (476)
T PLN02955 147 TYHRLLESSLADLKKKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR-LAERQGN 225 (476)
T ss_pred HHHHHHHHHHHHHHCCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHH-hccccCC
Confidence 45678999999999999999999999984 555444 2345677777777876433222 22222 5
Q ss_pred cEEEeeCCCCHHHHHhhcCC---CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC---------
Q psy12791 123 LEVDFVDLRKIENLIKYIKP---NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK--------- 190 (393)
Q Consensus 123 ~~v~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~--------- 190 (393)
+++..++.+|++++++.+.. +.++|+++...++.|.+.|+++|.++|++| |+++|+||+|+.+....
T Consensus 226 a~~~~f~HND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~-ga~LiVDEAH~~Gv~G~~G~G~~e~~ 304 (476)
T PLN02955 226 VEVFVYRHCDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKY-GFLLVIDDAHGTFVCGENGGGVAEEF 304 (476)
T ss_pred ceEEEeCCCCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHc-CcEEEEcccccCceecCCCCcHHHHh
Confidence 88888999999999888742 356788889999999999999999999999 99999999999765432
Q ss_pred CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh--cCCCCCHHHHHHHHhccCC---HHHHHHHHHHH
Q psy12791 191 SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS--MGVVPSPFDCWLVTRGLKT---LPCRLKEHERG 265 (393)
Q Consensus 191 ~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 265 (393)
.+....|++++||+|.+ |. ++||++++ +++++.++..... +++..++..+..++.+++. ...+++++.++
T Consensus 305 g~~~di~ii~~TLsKA~-G~---~GGfi~gs-~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n 379 (476)
T PLN02955 305 NCEADVDLCVGTLSKAA-GC---HGGFIACS-KKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWER 379 (476)
T ss_pred CCCCCCcEEEEeCccch-hc---cCceeecH-HHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 12235789999999998 44 48999987 7788877654332 2333333343333333322 23355555555
Q ss_pred HHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcc
Q psy12791 266 SIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPA 345 (393)
Q Consensus 266 ~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~ 345 (393)
.+.+.+.+ +.. . ..+++.+.+ +++..+..+.+.|...++-++. +..|.
T Consensus 380 ~~~fr~~~----G~~---~------------------~sPI~pI~i-g~~~~a~~~~~~L~~~Gi~v~~------i~yPt 427 (476)
T PLN02955 380 VKEFKALS----GVD---I------------------SSPIISLVV-GNQEKALKASRYLLKSGFHVMA------IRPPT 427 (476)
T ss_pred HHHHHHhc----CCC---C------------------CCCEEEEEe-CCHHHHHHHHHHHHHCCCEEEE------ECCCC
Confidence 55554421 110 0 147888888 6888888888888765544432 22222
Q ss_pred cccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 346 EMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
. ......+|++++..+++++++.+.++|.++.
T Consensus 428 V--------------P~g~~rLRi~lsA~Ht~edId~lv~~L~~~~ 459 (476)
T PLN02955 428 V--------------PPNSCRLRVTLSAAHTTEDVKKLITALSSCL 459 (476)
T ss_pred C--------------CCCCceEEEeeCCCCCHHHHHHHHHHHHHHH
Confidence 1 0114579999999999999999999998764
No 214
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.90 E-value=4.2e-21 Score=184.72 Aligned_cols=298 Identities=15% Similarity=0.061 Sum_probs=190.4
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC-----
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL----- 130 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~----- 130 (393)
+.++..+||++++++++.+..+++.+|+.++ .++.+++++|| |++++|.|.+ +.......|++++.++.
T Consensus 76 ~~~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~----~~~~i~~~G~~~v~v~~~~~~~ 150 (460)
T PRK13238 76 GSRSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDT----TRAHIELNGATAVDLVIDEALD 150 (460)
T ss_pred CCCCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccc----hHHHHHHcCCEEEEEecccccc
Confidence 4578899999999999988887777788887 77778899999 9999998875 44556678999888765
Q ss_pred ----------CCHHHHHhhcCC----CCcEEEEecCCCCcc-cccC---HHHHHHHHHhCCCcEEEEeCccCcc--ccc-
Q psy12791 131 ----------RKIENLIKYIKP----NTKMVWIENPTNPLM-TVFD---VKAISAVVKQHPDILLVLDNTFLTA--YYQ- 189 (393)
Q Consensus 131 ----------~d~~~l~~~l~~----~~~~v~l~~p~nptG-~~~~---~~~l~~l~~~~~~~~livDea~~~~--~~~- 189 (393)
-|++++++.+.+ ++++|++++|+|||| .+++ +++|.++|+++ |++||+|+++... ++.
T Consensus 151 ~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~-gi~li~Daa~~~e~a~f~~ 229 (460)
T PRK13238 151 TGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKY-GIPVVIDAARFAENAYFIK 229 (460)
T ss_pred ccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEECcchhhhhhhhh
Confidence 268899999873 699999999999998 7877 56899999999 9999999987531 110
Q ss_pred ------CCCC---------CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh-----cCCCCCHHHHHHHH
Q psy12791 190 ------KSLP---------WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS-----MGVVPSPFDCWLVT 249 (393)
Q Consensus 190 ------~~~~---------~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 249 (393)
.... ...|+++.|.+|...|+ .+|+++++++++.++++..... ..+..+...+..+.
T Consensus 230 ~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~---~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala 306 (460)
T PRK13238 230 QREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVN---IGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALA 306 (460)
T ss_pred hccccccCCCHHHHhhhhcccCcEEEEecccCCCCc---ceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHH
Confidence 1111 13688888989976433 2688888767888888765311 12222233233333
Q ss_pred hccCC-H-HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-------HHHHHH
Q psy12791 250 RGLKT-L-PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-------AEETRI 320 (393)
Q Consensus 250 ~~~~~-~-~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 320 (393)
.+++. . ....+...++++.+.+.|++. ++. +..|. .+..+.+.+..- ......
T Consensus 307 ~~l~e~~~~~~~~~~~~~~~~l~~~L~~~-G~~-~~~p~----------------Gg~~v~~d~~~~~~~~~~~~~~~~~ 368 (460)
T PRK13238 307 VGLYEGMDEDYLAYRIGQVEYLGEGLEEA-GVP-IQTPA----------------GGHAVFVDAGKFLPHIPAEQFPAQA 368 (460)
T ss_pred hhHHHhhChHHHHHHHHHHHHHHHHHHHC-CCC-eEccC----------------CceEEEEEchhcCCCCCCCCCchHH
Confidence 22221 1 123333444567888888764 333 22232 123344444210 001233
Q ss_pred HHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC-ChHHHHHHHHHHHHHhh
Q psy12791 321 FLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE-GYTDLIADLDQALRKAC 391 (393)
Q Consensus 321 ~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~-~~~~~i~~l~~al~~~~ 391 (393)
|...| ...++....++.+.....+...... -....++||.+..- =+++.++.+.++|..+.
T Consensus 369 ~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~----------~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~ 431 (460)
T PRK13238 369 LACELYLEAGIRGVEIGSLLLGRDPKTGEQL----------PAPAELLRLAIPRRVYTQSHMDYVAEALKAVK 431 (460)
T ss_pred HHHHHHHHcCeeeecccceecccCCCCcccc----------CCccceEEEecccccCCHHHHHHHHHHHHHHH
Confidence 33332 3446666666665544322110000 01258999999753 26777788888887765
No 215
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.90 E-value=3.5e-22 Score=187.57 Aligned_cols=264 Identities=16% Similarity=0.118 Sum_probs=175.3
Q ss_pred chHHHHHHH----HHHHhCCC----cEEEeccHHHHH-HHHHHhcC------------CC--CeEEEcCCCccchHHHHH
Q psy12791 59 PTRRNLERC----IASLEEAK----HGLCYSSGLGAV-TAVTHLLS------------AG--DHIISGDDVYGGTYRYFA 115 (393)
Q Consensus 59 ~~~~~lr~~----la~~~~~~----~~i~~~~G~~al-~~~~~~~~------------~g--d~vl~~~~~y~~~~~~~~ 115 (393)
+...+++++ +++++|.+ +.+++++|++++ .++.++.. ++ +.|++++++|.+ +.
T Consensus 34 ~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~----~~ 109 (345)
T cd06450 34 PAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVS----VE 109 (345)
T ss_pred chhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhH----HH
Confidence 444455555 56666864 455556666676 55554421 23 378888888875 55
Q ss_pred HhcccCCcEEEeeCCC-----CHHHHHhhcCC------CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccC
Q psy12791 116 QVAPKIGLEVDFVDLR-----KIENLIKYIKP------NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFL 184 (393)
Q Consensus 116 ~~~~~~g~~v~~~~~~-----d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~ 184 (393)
..++..|.+++.++.+ |++++++.+.+ ++++|++++|+||||.+.|+++|.++|+++ |+++++|++|+
T Consensus 110 ~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~-~~~l~vD~a~~ 188 (345)
T cd06450 110 KAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKY-DLWLHVDAAYG 188 (345)
T ss_pred HHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHh-CCeEEEechhh
Confidence 5566678999988764 78999998876 788999999999999999999999999999 99999999998
Q ss_pred cccccCCC------C-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhcc--CCH
Q psy12791 185 TAYYQKSL------P-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGL--KTL 255 (393)
Q Consensus 185 ~~~~~~~~------~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 255 (393)
.+...... . .+.|++..|+||+++++. ++|+++.+ ....+.+.+.+ ..+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~--g~g~~~~~--------------------~~~~~~~l~~l~~~g~ 246 (345)
T cd06450 189 GFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPL--GCSAVLVR--------------------ALKLWATLRRFGRDGY 246 (345)
T ss_pred HHHhhChhhHHHhcCccccCEEEEchhHhhCCCc--chHHHHHH--------------------HHHHHHHHHHHhHHHH
Confidence 76542111 1 257899999999885444 48887654 11111111111 224
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC---HHHHHHHHHhcCcccccc
Q psy12791 256 PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG---AEETRIFLESLLIFRCAE 332 (393)
Q Consensus 256 ~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~ 332 (393)
+.++++..+.++.+.+.|++.+++..+..+ ..+++.|.+++. ......+.+.|...+...
T Consensus 247 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-----------------~~~iv~f~~~~~~~~~~~~~~i~~~L~~~g~~~ 309 (345)
T cd06450 247 GEHIDRIVDLAKYLAELIRADPGFELLGEP-----------------NLSLVCFRLKPSVKLDELNYDLSDRLNERGGWH 309 (345)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------ceeEEEEEECCcchhhHHHHHHHHHHHhcCCEE
Confidence 556677777888888888877765422111 146788887432 234445666554432111
Q ss_pred ccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC-ChHHHHHHHHHHHHH
Q psy12791 333 SLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE-GYTDLIADLDQALRK 389 (393)
Q Consensus 333 ~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~-~~~~~i~~l~~al~~ 389 (393)
..+.. . + .+.++|+|++.. +++++++.+.++|++
T Consensus 310 ~~~~~------~----------------~-~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 310 VPATT------L----------------G-GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EEeeE------E----------------C-CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 11000 0 0 157899999987 599999999999875
No 216
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.89 E-value=8.5e-21 Score=179.62 Aligned_cols=306 Identities=16% Similarity=0.122 Sum_probs=201.9
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----- 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----- 131 (393)
+..+++++.+++++|.++.+++++|++++ .++..+ +++||+|+++.++|.+ +...+...|++++.++.+
T Consensus 31 ~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~----~~~~~~~~G~~~v~~d~d~~~~~ 106 (375)
T PRK11706 31 GFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVS----TANAFVLRGAKIVFVDIRPDTMN 106 (375)
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHH----HHHHHHHcCCEEEEEecCCCcCC
Confidence 56688999999999998888888888888 555544 7899999999999986 445567789999999864
Q ss_pred -CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc--CCCCCcCcEEEEccc--cc
Q psy12791 132 -KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ--KSLPWGVDIVLYSLT--KY 206 (393)
Q Consensus 132 -d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~--~~~~~~~di~~~S~s--K~ 206 (393)
|++++++.+++++++|+++| ++|...++++|.++|+++ |+++|+|++|+.+... .+.....|+.+.||+ |.
T Consensus 107 ~d~~~le~~i~~~tk~i~~~~---~~G~~~~~~~i~~la~~~-~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K~ 182 (375)
T PRK11706 107 IDETLIEAAITPKTRAIVPVH---YAGVACEMDTIMALAKKH-NLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKN 182 (375)
T ss_pred cCHHHHHHhcCCCCeEEEEeC---CCCCccCHHHHHHHHHHc-CCEEEEECccccccccCCeeeecCcCEEEEeCCCCcc
Confidence 68999999988899999764 689999999999999999 9999999999876521 222222477788876 99
Q ss_pred ccCCCCceEEEEEecChHHHHHHHHHHHh-------------------cCC--CCCHHHHHHHHhccCCHHHHHHHHHHH
Q psy12791 207 MNGHSDVVMGATVTNDDSLQARLKFLQNS-------------------MGV--VPSPFDCWLVTRGLKTLPCRLKEHERG 265 (393)
Q Consensus 207 ~~G~~G~r~G~~~~~~~~~~~~~~~~~~~-------------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (393)
++ . |.++++++ +++++.++++..+.. .|. .++...+.+....++.+....++..++
T Consensus 183 l~-~-g~gG~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~ 259 (375)
T PRK11706 183 YT-A-GEGGALLI-NDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLAL 259 (375)
T ss_pred cc-c-cCCeEEEE-CCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 93 4 65555554 558888877665531 111 124455666666667777667777777
Q ss_pred HHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcc
Q psy12791 266 SIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPA 345 (393)
Q Consensus 266 ~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~ 345 (393)
...+.+.|.+++....+..+..+.. ......++++.++ +....+.+.+.|...++..+... ..+...+.
T Consensus 260 ~~~~~~~L~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~~~r~~l~~~L~~~gI~~~~~~-~p~~~~~~ 328 (375)
T PRK11706 260 WQRYYDALAPLAEAGRIELPSIPDD---------CKHNAHMFYIKLR-DLEDRSALINFLKEAGIMAVFHY-IPLHSSPA 328 (375)
T ss_pred HHHHHHHhcCCCcCCeeecCCCCCC---------CceeeEEEEEEEC-CcCCHHHHHHHHHHCCCCccccC-CccCcchh
Confidence 7788888876552111222221100 0001245667773 22345566666655555443321 11111111
Q ss_pred ccc----CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 346 EMT----HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 346 ~~~----~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
... ....|..+.. ..+.|-|-++..-++++++.+.+++++.
T Consensus 329 ~~~~~~~~~~~p~a~~~----~~~~l~lP~~~~l~~~~~~~i~~~i~~~ 373 (375)
T PRK11706 329 GERFGRFHGEDRYTTKE----SERLLRLPLFYNLTDVEQRTVIDTILEF 373 (375)
T ss_pred hHhcCCCCCCChHHHHH----HhCcEeccCCCCCCHHHHHHHHHHHHHH
Confidence 110 0122322222 2566777777777888899999998875
No 217
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.89 E-value=7.4e-22 Score=188.32 Aligned_cols=211 Identities=21% Similarity=0.250 Sum_probs=168.6
Q ss_pred hHHHHHHHHHHHhCCCcEEEeccHHHHHHHHHHhcCCCCeEEEcCCC---ccchHHHHHHhcccCCcEEEeeCC---CCH
Q psy12791 60 TRRNLERCIASLEEAKHGLCYSSGLGAVTAVTHLLSAGDHIISGDDV---YGGTYRYFAQVAPKIGLEVDFVDL---RKI 133 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~---y~~~~~~~~~~~~~~g~~v~~~~~---~d~ 133 (393)
.+..+++.+|+++|++++++++||++++.+++..+.+||+|++++.. |++++.. ...++..|+++++++. .++
T Consensus 123 r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~l~~GdeVIvs~~e~v~~ggs~~i-~~~~~~~G~~~~~v~~~~~~~l 201 (454)
T TIGR00474 123 RYSHVEGLLCELTGAEDALVVNNNAAAVLLALNTLAKGKEVIVSRGELVEIGGSFRI-PDVMEQSGAKLVEVGTTNRTHL 201 (454)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCcCEEEECCChhhhhcchhhH-HHHHHHcCCEEEEeCCCCCCCH
Confidence 45789999999999999999999999984333557899999999876 4555443 4566788999999987 378
Q ss_pred HHHHhhcCCCCcEEEEecCCCCc--c--cccCHHHHHHHHHhCCCcEEEEeCccCcc------------cccCCCCCcCc
Q psy12791 134 ENLIKYIKPNTKMVWIENPTNPL--M--TVFDVKAISAVVKQHPDILLVLDNTFLTA------------YYQKSLPWGVD 197 (393)
Q Consensus 134 ~~l~~~l~~~~~~v~l~~p~npt--G--~~~~~~~l~~l~~~~~~~~livDea~~~~------------~~~~~~~~~~d 197 (393)
++++++++++|++|++++++|++ | ...|+++|.++|+++ |+++++|.+.+.. ..+.+...|+|
T Consensus 202 ~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~-g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaD 280 (454)
T TIGR00474 202 KDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALGREH-GLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVD 280 (454)
T ss_pred HHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHc-CCeEEEECCCcccccchhccCCCCcccccHhHcCCC
Confidence 99999999999999999999995 5 578999999999999 9999999874321 11233446899
Q ss_pred EEEEcccccccCCCCceEEEEEecChHHHHHHH----------------HHHHhcCCCCCHHHHHHHHhccCCHHHHHHH
Q psy12791 198 IVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK----------------FLQNSMGVVPSPFDCWLVTRGLKTLPCRLKE 261 (393)
Q Consensus 198 i~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (393)
++++|.+|+++|+ .+|+++++ ++++++++ ......+....+..++.....++.+..++++
T Consensus 281 iv~fSg~K~LgGp---~~G~i~g~-~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~ 356 (454)
T TIGR00474 281 LVTFSGDKLLGGP---QAGIIVGK-KELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEE 356 (454)
T ss_pred EEEecCccccCCC---eEEEEEEC-HHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHH
Confidence 9999999999655 38999998 66665432 1223445566777778888888888889999
Q ss_pred HHHHHHHHHHHHhhC
Q psy12791 262 HERGSIEVAKFLESH 276 (393)
Q Consensus 262 ~~~~~~~l~~~l~~~ 276 (393)
+.+++.++.++|+..
T Consensus 357 ~~~~A~~la~~L~~~ 371 (454)
T TIGR00474 357 LRARAERLAKRLKAA 371 (454)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999999864
No 218
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.89 E-value=7.5e-22 Score=189.94 Aligned_cols=322 Identities=17% Similarity=0.112 Sum_probs=199.8
Q ss_pred CCCCC-CCC--CCCCc-cCCeeeeCCCCCCCCCccccCC--CCchHHHHHHHHHHHhC--CCcEEEeccHHHHH-HHHHH
Q psy12791 22 DQWRS-QCV--IPPII-LSTTFKQNTPGQPPQGFEYSRS--NNPTRRNLERCIASLEE--AKHGLCYSSGLGAV-TAVTH 92 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~-~~~~~~~~~~~~~~~~~~y~~~--~~~~~~~lr~~la~~~~--~~~~i~~~~G~~al-~~~~~ 92 (393)
.+++| .++ .++++ .++.+.++..+.+.....|... ..+...++++.++++++ .++.+++++|++++ .++..
T Consensus 36 ~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~ 115 (413)
T cd00610 36 NRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKL 115 (413)
T ss_pred CEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHH
Confidence 35567 443 45666 5556665554443222333322 24678899999999998 44566667777787 55544
Q ss_pred h--cCCCCeEEEcCCCccchHHHHHHhcc---------cCCcEEEeeCCC-----------CHHHHHhhcCC---CCcEE
Q psy12791 93 L--LSAGDHIISGDDVYGGTYRYFAQVAP---------KIGLEVDFVDLR-----------KIENLIKYIKP---NTKMV 147 (393)
Q Consensus 93 ~--~~~gd~vl~~~~~y~~~~~~~~~~~~---------~~g~~v~~~~~~-----------d~~~l~~~l~~---~~~~v 147 (393)
+ ..++++|++.+++|++.......... ....+++.+|.+ |++++++.+.+ ++++|
T Consensus 116 ~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v 195 (413)
T cd00610 116 ARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAV 195 (413)
T ss_pred HHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEE
Confidence 3 36789999999999875433322211 112356677776 78889888865 46777
Q ss_pred EEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-cCC-----CCCcCcEEEEcccccccCCCCceEEE
Q psy12791 148 WIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-QKS-----LPWGVDIVLYSLTKYMNGHSDVVMGA 217 (393)
Q Consensus 148 ~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~ 217 (393)
+++..+|++|.+++ +++|.++|+++ |+++|+||+|+.+.. ... .....|+ .|+||+++ . |+|+||
T Consensus 196 i~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~--~t~sK~l~-~-g~~~g~ 270 (413)
T cd00610 196 IVEPIQGEGGVIVPPPGYLKALRELCRKH-GILLIADEVQTGFGRTGKMFAFEHFGVEPDI--VTLGKGLG-G-GLPLGA 270 (413)
T ss_pred EEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCcchhhHhhcCCCCCe--EEEccccc-C-ccccEE
Confidence 77777888899887 99999999999 999999999986411 111 1123354 47889994 4 799999
Q ss_pred EEecChHHHHHH--HHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcch
Q psy12791 218 TVTNDDSLQARL--KFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNH 293 (393)
Q Consensus 218 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~ 293 (393)
++++ +++++.+ ...........++..+..+...++.+. ...++..+..+.+.+.|+..... .+.
T Consensus 271 ~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~----~~~------- 338 (413)
T cd00610 271 VLGR-EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEK----HPL------- 338 (413)
T ss_pred EEEc-HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhh----CCc-------
Confidence 9987 8888875 111111122334555444444443322 23445555556666666543110 000
Q ss_pred HHHhhhcCCCcceEEEEEcCC-------HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCe
Q psy12791 294 ELAKSQWSGTSGMLSFYVNGG-------AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNL 366 (393)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~ 366 (393)
.....+.|.++++.+... ......+.+.+...++.+..++ .+.
T Consensus 339 ---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~---------------------------~~~ 388 (413)
T cd00610 339 ---VGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG---------------------------GNV 388 (413)
T ss_pred ---EEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC---------------------------CCE
Confidence 000123467888888422 1345666666654444433221 368
Q ss_pred EEEEecCCChHHHHHHHHHHHHHh
Q psy12791 367 VRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 367 iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+|++++..+++++++.+.++|+++
T Consensus 389 lR~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 389 IRLLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHh
Confidence 999999999999899888888754
No 219
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.89 E-value=2.8e-21 Score=182.73 Aligned_cols=277 Identities=14% Similarity=0.136 Sum_probs=172.2
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENL 136 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l 136 (393)
.+..+++|+++|+++|.++.+++++|..++ ..+..+.++||.|++....|.+++..+.. ..+.. +.++..|++++
T Consensus 55 ~~~~~~~e~~la~~~~~~~~l~~~sG~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~---~~~~~-~~~~~~d~~~l 130 (370)
T PRK05937 55 SSLLDDLEHKIAHFHGAPEAFIVPSGYMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSV---ISGWH-QSFRHNDLDHL 130 (370)
T ss_pred hHHHHHHHHHHHHHhCCCeEEEECChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHH---cCCce-EEecCCCHHHH
Confidence 467899999999999999899999999986 44444557788888878888775544332 22333 44566788888
Q ss_pred HhhcC------CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-----CCc---CcEEEEc
Q psy12791 137 IKYIK------PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-----PWG---VDIVLYS 202 (393)
Q Consensus 137 ~~~l~------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-----~~~---~di~~~S 202 (393)
++.++ +++.+|++++++|++|.+.|+++|.++|+++ |+++++||+|+.+...... ..+ .++++.|
T Consensus 131 ~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~-~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~t 209 (370)
T PRK05937 131 ESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKY-HAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVT 209 (370)
T ss_pred HHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHc-CCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEe
Confidence 88875 2356778899999999999999999999999 9999999999976432211 112 2377899
Q ss_pred ccccccCCCCceEEEEEecChHHHHHHHHHHH--hcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcc
Q psy12791 203 LTKYMNGHSDVVMGATVTNDDSLQARLKFLQN--SMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVK 280 (393)
Q Consensus 203 ~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 280 (393)
+||.+ |+.| +|.+ .. +++.+.+..... .+....++.....+...++.+....+...+..+.+.+++.+.-.
T Consensus 210 lsK~~-g~~G--~~vl-~~-~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~-- 282 (370)
T PRK05937 210 YSKAL-GSMG--AALL-SS-SEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFS-- 282 (370)
T ss_pred chhhh-hcCc--eEEE-cC-HHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcC--
Confidence 99999 6777 4544 44 454444432211 12223344443333333332221111222233334444432100
Q ss_pred eEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhc
Q psy12791 281 GVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDAL 360 (393)
Q Consensus 281 ~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~ 360 (393)
...+ +....|.+++ . ..+.+.+.|...++.++. .+.+
T Consensus 283 -~~~~------------------~~~~~i~~~~-~-~~~~~~~~L~~~gi~v~~------~~~~---------------- 319 (370)
T PRK05937 283 -SAAP------------------GCVQPIFLPG-I-SEQELYSKLVETGIRVGV------VCFP---------------- 319 (370)
T ss_pred -CCCC------------------CCEEEEEeCC-h-hHHHHHHHHHHCCeeEEe------eCCC----------------
Confidence 0000 1223455532 2 234555555443443321 1111
Q ss_pred CCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 361 GITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 361 g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..++||+|++.++++++++.+.++|+++.
T Consensus 320 --~~~~iRis~~~~~t~edid~l~~~L~~~~ 348 (370)
T PRK05937 320 --TGPFLRVNLHAFNTEDEVDILVSVLATYL 348 (370)
T ss_pred --CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 14689999999999999999999998764
No 220
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.89 E-value=6.1e-21 Score=182.68 Aligned_cols=286 Identities=19% Similarity=0.152 Sum_probs=192.4
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcC---------CC-CeEEEcCCCccchHHHHHHh--------
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLS---------AG-DHIISGDDVYGGTYRYFAQV-------- 117 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~---------~g-d~vl~~~~~y~~~~~~~~~~-------- 117 (393)
..+...+|++.|+++.+.+..++++||++|+ .++..+.. +| ++|++....|++.......+
T Consensus 81 ~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~ 160 (401)
T PRK00854 81 RNDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARG 160 (401)
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccc
Confidence 4567889999999999888899999999997 55544321 23 67888887777643222211
Q ss_pred -cccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccccCC-
Q psy12791 118 -APKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQKS- 191 (393)
Q Consensus 118 -~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~~~- 191 (393)
.......+..++..|++++++.+.+++++|++++|+||+|.+.| +++|.++|+++ |+++|+||+|..+ ...+
T Consensus 161 ~~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~-gi~lI~DEv~~g~-g~~g~ 238 (401)
T PRK00854 161 GFGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTAN-NVTLILDEIQTGL-GRTGK 238 (401)
T ss_pred cCCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhCC-CCCch
Confidence 11112356677778999999999888999999999999999997 99999999999 9999999999742 2111
Q ss_pred ------CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHH--HHHHHH
Q psy12791 192 ------LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPC--RLKEHE 263 (393)
Q Consensus 192 ------~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 263 (393)
.....|+++. +|+++| ..+|+|+++++ +++.+.+...........++..+..+...++.+.. ..+...
T Consensus 239 ~~~~~~~g~~~D~~~~--~K~l~g-g~~~ig~v~~~-~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~ 314 (401)
T PRK00854 239 LLAEEHEGIEADVTLI--GKALSG-GFYPVSAVLSN-SEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAA 314 (401)
T ss_pred HhHHhhcCCCCCEEEe--cccccC-CccCeEEEEEc-HHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 1224577764 699953 34689999997 77777664322222223467777766666655443 345555
Q ss_pred HHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccC
Q psy12791 264 RGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADL 343 (393)
Q Consensus 264 ~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~ 343 (393)
++.+.+.+.|++..... + ...++.|.++.+.+.++......+.+.+...++.+..
T Consensus 315 ~~~~~l~~~L~~~~~~~-~---------------~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~--------- 369 (401)
T PRK00854 315 EMGAYFLEGLRSIRSNI-V---------------REVRGRGLMLAVELEPEAGGARQYCEALKERGLLAKD--------- 369 (401)
T ss_pred HHHHHHHHHHHhhccCc-e---------------EEEeccceEEEEEEecCchhHHHHHHHHHHCCeEEec---------
Confidence 66666777776542110 0 0112346677776643333455666666544433311
Q ss_pred cccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 344 PAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
...+.||+++++..++++++.+.++|+++.
T Consensus 370 ------------------~~~~~lR~~p~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 370 ------------------THDHTIRLAPPLVITREQVDWALEQIAKVL 399 (401)
T ss_pred ------------------CCCCEEEEeCCcccCHHHHHHHHHHHHHHh
Confidence 014799999999999999998888887653
No 221
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.89 E-value=1.8e-21 Score=183.37 Aligned_cols=305 Identities=23% Similarity=0.240 Sum_probs=208.4
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---- 131 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---- 131 (393)
.+...++++++++++|.+.++.++||++|+ .++.++ +++||+|++|..+|.++ .......|+++++++.+
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~----~~ai~~~G~~pv~~Di~~~~~ 99 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPAT----ASAILWAGAEPVFVDIDPETL 99 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THH----HHHHHHTT-EEEEE-BETTTS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHH----HHHHHHhccEEEEEeccCCcC
Confidence 478899999999999999999999999998 666655 67999999999999964 45567789999999886
Q ss_pred --CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC--CCCCcCcEEEEcc--cc
Q psy12791 132 --KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK--SLPWGVDIVLYSL--TK 205 (393)
Q Consensus 132 --d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~--~~~~~~di~~~S~--sK 205 (393)
|++++++.++++|++|++.|.. |...++++|.++|+++ |++||.|.+++.+.... ....-.|+.+.|| +|
T Consensus 100 ~id~~~~~~~i~~~t~ai~~~h~~---G~~~d~~~i~~~~~~~-~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~K 175 (363)
T PF01041_consen 100 NIDPEALEKAITPKTKAILVVHLF---GNPADMDAIRAIARKH-GIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHPTK 175 (363)
T ss_dssp SB-HHHHHHHHHTTEEEEEEE-GG---GB---HHHHHHHHHHT-T-EEEEE-TTTTT-EETTEETTSSSSEEEEESSTTS
T ss_pred CcCHHHHHHHhccCccEEEEecCC---CCcccHHHHHHHHHHc-CCcEEEccccccCceeCCEeccCCCCceEecCCCCC
Confidence 8999999999999999988877 9999999999999999 99999999999765322 2222358999998 58
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHHh-----------------cCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQNS-----------------MGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIE 268 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (393)
.++ .. -+|+++++++++.++++..+.. ....++.++++++...++.+..+.++..++...
T Consensus 176 ~i~-~g--eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~ 252 (363)
T PF01041_consen 176 IIT-TG--EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQR 252 (363)
T ss_dssp SS--SS--S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCc-CC--CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 874 33 3999999999999988765531 112356778888888999999999999999999
Q ss_pred HHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH-HHHHHHHHhcCccccccccCCccccccCcccc
Q psy12791 269 VAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA-EETRIFLESLLIFRCAESLGGIESLADLPAEM 347 (393)
Q Consensus 269 l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~ 347 (393)
+.+.|...+.+.....+.-.. ......+.+.+++.. ...+.+.+.|...++.........+...+...
T Consensus 253 y~~~L~~~~~~~~~~~~~~~~-----------~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~ 321 (363)
T PF01041_consen 253 YREALAGIPGIKPPPIPDGAE-----------RSSYYRFPIRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYR 321 (363)
T ss_dssp HHHHHTTGTTEEEEGCGTTTE-----------EBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGT
T ss_pred HHHHHhcCCCccccccccccc-----------ccccccccccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHH
Confidence 999999888765443322110 001123566664210 13555666665555554443221121111111
Q ss_pred c-----CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 348 T-----HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 348 ~-----~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
. ....|..+. .....|-|-++..-++++++.+.++++
T Consensus 322 ~~~~~~~~~~P~ae~----l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 322 SYPYYAPGDLPNAER----LSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp TGEEEETSSSHHHHH----HHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred hcCccccCCCHHHHH----HHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 1 011222222 125788899998889999999988874
No 222
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.88 E-value=4.5e-21 Score=183.71 Aligned_cols=149 Identities=19% Similarity=0.270 Sum_probs=116.1
Q ss_pred HHhCCC-cEEEeccHHHH-H-HHHHHhcCCC---CeEEEcCCCccchHHHHHHhcccCCcEE----EeeCCC-----CHH
Q psy12791 70 SLEEAK-HGLCYSSGLGA-V-TAVTHLLSAG---DHIISGDDVYGGTYRYFAQVAPKIGLEV----DFVDLR-----KIE 134 (393)
Q Consensus 70 ~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~g---d~vl~~~~~y~~~~~~~~~~~~~~g~~v----~~~~~~-----d~~ 134 (393)
+++|++ ++|++++|+++ + .++..+++++ +.|++.+.+|++....+...++..|+++ +.++.+ +++
T Consensus 80 ~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 159 (406)
T TIGR01814 80 RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLE 159 (406)
T ss_pred cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHH
Confidence 788876 67788777776 6 5566666654 3688888999987666665667788887 455442 667
Q ss_pred HHHhhc---CCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEcccccccCC
Q psy12791 135 NLIKYI---KPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTKYMNGH 210 (393)
Q Consensus 135 ~l~~~l---~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK~~~G~ 210 (393)
++++.+ .++|++|++++++|.||.++|+++|.++|+++ |+++++|++++.+.....+ ..++|+++.|.+||++|+
T Consensus 160 ~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~-g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l~g~ 238 (406)
T TIGR01814 160 DILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAK-GALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYLNAG 238 (406)
T ss_pred HHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHc-CCEEEEEcccccCCcccccccCCCCEEEEcCccccCCC
Confidence 777766 46799999999999999999999999999999 9999999999987654333 358999999999998767
Q ss_pred CCceEEEEEec
Q psy12791 211 SDVVMGATVTN 221 (393)
Q Consensus 211 ~G~r~G~~~~~ 221 (393)
|| +|.++.+
T Consensus 239 pG--~~l~v~~ 247 (406)
T TIGR01814 239 PG--AGAFVHE 247 (406)
T ss_pred CC--eEEEEeh
Confidence 77 5544444
No 223
>PRK04311 selenocysteine synthase; Provisional
Probab=99.88 E-value=7.4e-21 Score=181.95 Aligned_cols=213 Identities=22% Similarity=0.248 Sum_probs=159.2
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHHHHHHHhcCCCCeEEEcCCCcc---chHHHHHHhcccCCcEEEeeCCC---C
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYG---GTYRYFAQVAPKIGLEVDFVDLR---K 132 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~---~~~~~~~~~~~~~g~~v~~~~~~---d 132 (393)
+.+..+++.+|+++|++++++++||++++.+++..+.+||+|++++.+|. +++. +....+..|+++++++.. +
T Consensus 127 ~r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~l~~GdeVIvs~~e~~~~ggs~~-i~~~~~~~G~~l~~v~~~~~t~ 205 (464)
T PRK04311 127 SRDRALAALLCALTGAEDALVVNNNAAAVLLALNALAAGKEVIVSRGELVEIGGAFR-IPDVMRQAGARLVEVGTTNRTH 205 (464)
T ss_pred hHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCEEEEcchhhhhcCcchh-hHHHHHHCCcEEEEECCCCCCC
Confidence 34578999999999999999999999988434455689999999987543 3333 345567889999999863 6
Q ss_pred HHHHHhhcCCCCcEEEEecCCCC--cc--cccCHHHHHHHHHhCCCcEEEEeCccCcc------------cccCCCCCcC
Q psy12791 133 IENLIKYIKPNTKMVWIENPTNP--LM--TVFDVKAISAVVKQHPDILLVLDNTFLTA------------YYQKSLPWGV 196 (393)
Q Consensus 133 ~~~l~~~l~~~~~~v~l~~p~np--tG--~~~~~~~l~~l~~~~~~~~livDea~~~~------------~~~~~~~~~~ 196 (393)
+++++++++++|++|++++++|| +| ...|+++|.++|+++ |+++++|.+.+.. ..+.++..|+
T Consensus 206 ~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~-gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~Ga 284 (464)
T PRK04311 206 LRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEH-GLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGV 284 (464)
T ss_pred HHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHc-CCeEEEECCCcccccchhccCCCCCchhhHHhcCC
Confidence 88999999999999999999998 34 567999999999999 9999999954321 1122344689
Q ss_pred cEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH--Hhc---CCCCCHHHHHH-----------HHhccCCHHHHHH
Q psy12791 197 DIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ--NSM---GVVPSPFDCWL-----------VTRGLKTLPCRLK 260 (393)
Q Consensus 197 di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~-----------~~~~~~~~~~~~~ 260 (393)
|++++|.+|+++|+ .+|+++++ ++++++++... ..+ +...+++.+++ ....++.+..+++
T Consensus 285 Div~fSg~K~LgGp---~~G~i~g~-~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~ 360 (464)
T PRK04311 285 DLVTFSGDKLLGGP---QAGIIVGK-KELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPE 360 (464)
T ss_pred cEEEecCcccccCC---ceEEEEEc-HHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHH
Confidence 99999999999654 38999997 78888776311 111 22223333332 2223334666788
Q ss_pred HHHHHHHHHHHHHhhCC
Q psy12791 261 EHERGSIEVAKFLESHP 277 (393)
Q Consensus 261 ~~~~~~~~l~~~l~~~~ 277 (393)
++.++++.+.++|+.++
T Consensus 361 ~~~~~A~~la~~L~~~~ 377 (464)
T PRK04311 361 ELRARAERLAAALKAAL 377 (464)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999998765
No 224
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.88 E-value=1.3e-20 Score=179.86 Aligned_cols=283 Identities=14% Similarity=0.109 Sum_probs=184.9
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhc---------CCC-CeEEEcCCCccchHHHHHHhccc-----
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLL---------SAG-DHIISGDDVYGGTYRYFAQVAPK----- 120 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~---------~~g-d~vl~~~~~y~~~~~~~~~~~~~----- 120 (393)
..+...+|.++|+++.+.+..++++||++|+ .++.... ++| ++|+..+.+|++.......+...
T Consensus 80 ~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~ 159 (396)
T PRK04073 80 HSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKR 159 (396)
T ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCccccc
Confidence 4567788999999988877899999999997 5443221 134 67888887777643222111110
Q ss_pred -CC---cEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccccc---
Q psy12791 121 -IG---LEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQ--- 189 (393)
Q Consensus 121 -~g---~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~--- 189 (393)
.+ ..+..++..|++++++.+.+++++|++++++||+|.++| +++|.++|+++ |+++|+||+|..+...
T Consensus 160 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~~g~g~~g~~ 238 (396)
T PRK04073 160 GFGPMLPGIKKIPYGDLEALKAAITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEE-NVLFIADEIQTGLGRTGKL 238 (396)
T ss_pred CCCCCCCCceEeCCCCHHHHHHhcccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEecchhCCCcCcHH
Confidence 00 124556777899999999888999999999999999987 78999999999 9999999999963211
Q ss_pred ---CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHH
Q psy12791 190 ---KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHER 264 (393)
Q Consensus 190 ---~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 264 (393)
.......|++ ++||.+ |.+|+|+||++++ +++.+.+...........++..+..+...++.+. ...++..+
T Consensus 239 ~~~~~~~~~pdi~--~~sK~l-g~gg~~ig~~~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~ 314 (396)
T PRK04073 239 FACDWDNVTPDMY--ILGKAL-GGGVFPISCVAAN-RDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLE 314 (396)
T ss_pred HHhhhcCCCCCEE--Eecccc-cCCCCcceEEEEc-HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 1112235655 478999 5788999999997 7888776432221222345666665555554322 12344445
Q ss_pred HHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCc
Q psy12791 265 GSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLP 344 (393)
Q Consensus 265 ~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~ 344 (393)
..+.+.+.|+++.. +.+ ...++.|.++.+.+.. ....+.+.+...++.+..
T Consensus 315 ~~~~l~~~L~~l~~------~~i----------~~~~~~g~~~~~~~~~---~~~~~~~~l~~~Gv~~~~---------- 365 (396)
T PRK04073 315 LGEYFKEQLKEIDN------PMI----------KEVRGRGLFIGVELNE---PARPYCEALKEEGLLCKE---------- 365 (396)
T ss_pred HHHHHHHHHHhhcC------Ccc----------cceecceEEEEEEecc---hHHHHHHHHHHCCeEEec----------
Confidence 56666666664311 110 1113346778888742 234455555433333211
Q ss_pred ccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 345 AEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..+++||+++++..++++++.+.++|+++
T Consensus 366 -----------------~~~~~iRi~p~l~~t~e~i~~~~~~l~~~ 394 (396)
T PRK04073 366 -----------------THETVIRFAPPLVITKEELDWAFEKIKAV 394 (396)
T ss_pred -----------------CCCCEEEEECCcccCHHHHHHHHHHHHHH
Confidence 01478999999999999999999888765
No 225
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.88 E-value=6.6e-20 Score=175.70 Aligned_cols=307 Identities=18% Similarity=0.132 Sum_probs=203.0
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh---------cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL---------LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV 128 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~---------~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~ 128 (393)
+...+|++++|+++|.+..++++||++++ .++.++ +++||+|+++.++|.++ ...+...|++++.+
T Consensus 63 ~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~----~~~v~~~G~~pv~v 138 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTT----VNPIIQNGLVPVFV 138 (438)
T ss_pred hhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHH----HHHHHHcCCEEEEE
Confidence 56789999999999998899999999997 555543 58899999999999864 44556679999888
Q ss_pred CCC------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCC--cCcEEE
Q psy12791 129 DLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPW--GVDIVL 200 (393)
Q Consensus 129 ~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~--~~di~~ 200 (393)
+.+ |++++++.+.+++++|+++++ +|...++++|.++|+++ |++||+|++|+.+........ -.|+.+
T Consensus 139 dvd~~~~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~-gi~vIeDaa~a~G~~~~g~~~G~~gd~~~ 214 (438)
T PRK15407 139 DVELPTYNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKH-NLWLIEDNCDALGSTYDGRMTGTFGDIAT 214 (438)
T ss_pred ecCCCcCCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHC-CCEEEEECccchhhhcCCeeeeccCceEE
Confidence 764 789999999889999999875 58888999999999999 999999999997654322211 238888
Q ss_pred Eccc--ccccCCCCceEEEEEecChHHHHHHHHHHHh---------------------------------------cCCC
Q psy12791 201 YSLT--KYMNGHSDVVMGATVTNDDSLQARLKFLQNS---------------------------------------MGVV 239 (393)
Q Consensus 201 ~S~s--K~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~ 239 (393)
.||+ |.+. . | .+|+++++++++.++++..+.. +...
T Consensus 215 fSf~~~k~~~-~-g-eGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~r 291 (438)
T PRK15407 215 LSFYPAHHIT-M-G-EGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLK 291 (438)
T ss_pred EeCCCCCCcc-c-c-CceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccC
Confidence 8885 5453 1 2 3799999989998877654431 0112
Q ss_pred CCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-HHHH
Q psy12791 240 PSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-AEET 318 (393)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 318 (393)
++.+++++....++.+....++..+++..+.+.|..++++. ..|..+.... ..-..+.+.+... ....
T Consensus 292 msel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~--~~~~~~~~~~---------~~~~~~~i~~~~~~~~~R 360 (438)
T PRK15407 292 ITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFL--ILPEATPNSD---------PSWFGFPITVKEDAGFTR 360 (438)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcc--ccCcCCCCCe---------eEEEEEEEEECCcCCCCH
Confidence 45566777888888888888888888889999898665421 1222111100 0001334444211 1124
Q ss_pred HHHHHhcCccccccccCCccccccCccccc-----CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 319 RIFLESLLIFRCAESLGGIESLADLPAEMT-----HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 319 ~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~-----~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.+++.|+..++.........+..+|.... ...+|..+.. ....|-|-++..-++++++.+.++++++.
T Consensus 361 d~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~----~~~~l~LP~~~~l~~~~v~~i~~~i~~~~ 434 (438)
T PRK15407 361 VELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRI----MNDTFWIGVYPGLTEEMLDYVIEKIEEFF 434 (438)
T ss_pred HHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHH----HhCeEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 455555554454433211101111111100 1122222221 24556666666668888999999998764
No 226
>PRK07505 hypothetical protein; Provisional
Probab=99.88 E-value=5.4e-20 Score=176.03 Aligned_cols=284 Identities=15% Similarity=0.124 Sum_probs=180.0
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHH----hcCCCC-eEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTH----LLSAGD-HIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~----~~~~gd-~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
..+...+++++|+++++. +.+++++|+++. .++.. ...+|+ .+++.+..|+++...+....+ .+.+++.+|.
T Consensus 89 ~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~~~ 166 (402)
T PRK07505 89 RSQILKDLEEALSELFGA-SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETIDH 166 (402)
T ss_pred hhHHHHHHHHHHHHHhCC-CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEeCC
Confidence 356778999999999988 889999999886 44422 222233 366777666655432233222 3568899999
Q ss_pred CCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccc---c-------CCC-CCcCcEE
Q psy12791 131 RKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYY---Q-------KSL-PWGVDIV 199 (393)
Q Consensus 131 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~---~-------~~~-~~~~di~ 199 (393)
.|++++++.+.++++++++++|+||||.+.++++|.++|+++ ++++|+||+|+.+.+ . ... ..+..++
T Consensus 167 ~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~-~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~ 245 (402)
T PRK07505 167 NDLDALEDICKTNKTVAYVADGVYSMGGIAPVKELLRLQEKY-GLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTII 245 (402)
T ss_pred CCHHHHHHHHhcCCCEEEEEecccccCCcCCHHHHHHHHHHc-CCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEE
Confidence 999999999877789999999999999999999999999999 999999999853111 0 111 1234688
Q ss_pred EEcccccccCCCCceEEEEEecChHHHHHHHHHHHh--cCCCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHH
Q psy12791 200 LYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS--MGVVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKF 272 (393)
Q Consensus 200 ~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~ 272 (393)
++|+||.+ |.+ +||++++++++.+.++..... ++...++..+..+...++ .+..+.+...++...+...
T Consensus 246 ~~s~sK~~-~~~---Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~ 321 (402)
T PRK07505 246 AASLGKAF-GAS---GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSL 321 (402)
T ss_pred EEechhhh-hcc---CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHH
Confidence 99999999 455 488776557888877654332 233344444443333322 2222233333332222222
Q ss_pred HhhCCCcceEeCCCCCCCcchHHHhhhcCCCc-ceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCC
Q psy12791 273 LESHPCVKGVLHPGLPSHPNHELAKSQWSGTS-GMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKS 351 (393)
Q Consensus 273 l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~ 351 (393)
+.. + ..+.+ .+..+.+ ++......+.+.+...++.+..+.. |.
T Consensus 322 ~~~---------~--------------~~g~~~~i~~~~~-~~~~~~~~~~~~l~~~Gi~v~~~~~------p~------ 365 (402)
T PRK07505 322 IPT---------E--------------QSGSFLPIRLIYI-GDEDTAIKAAKQLLDRGFYTSPVFF------PV------ 365 (402)
T ss_pred HHh---------c--------------CCCCCCCEEEEEe-CCHHHHHHHHHHHHHCCCeEeeecC------CC------
Confidence 110 0 01112 2334555 3444556677766555555443211 10
Q ss_pred CChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 352 IPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 352 ~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
. .....+||++++...++++++.+.++|+++.
T Consensus 366 ~--------~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l 397 (402)
T PRK07505 366 V--------AKGRAGLRIMFRASHTNDEIKRLCSLLKEIL 397 (402)
T ss_pred C--------CCCCceEEEecCccCCHHHHHHHHHHHHHHH
Confidence 0 0113689999999999999999999988654
No 227
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.88 E-value=2e-20 Score=181.55 Aligned_cols=284 Identities=15% Similarity=0.120 Sum_probs=182.4
Q ss_pred HHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----CH
Q psy12791 62 RNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----KI 133 (393)
Q Consensus 62 ~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----d~ 133 (393)
.++++.+++++|.+ +++++++|+++ + .++.++ ..+||+|+++++.|++....+...++..|++++.++.+ |+
T Consensus 115 ~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d~ 194 (447)
T PRK00451 115 FEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTDL 194 (447)
T ss_pred HHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCCH
Confidence 34456778899987 56777777765 6 555555 47899999999999875555555556689999999886 78
Q ss_pred HHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEE--eCccCcccccCCCCCcCcEEEEccccc---cc
Q psy12791 134 ENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVL--DNTFLTAYYQKSLPWGVDIVLYSLTKY---MN 208 (393)
Q Consensus 134 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~liv--Dea~~~~~~~~~~~~~~di~~~S~sK~---~~ 208 (393)
+++++.+++++++|++++| ||||.+.|+++|.++|+++ |+++++ |... .+....+...++|+++.|.+|+ +
T Consensus 195 ~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~-~~~~iv~~d~~~-~g~~~~~~~~~~D~~~~s~~k~~~~~- 270 (447)
T PRK00451 195 EALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAG-GALFIVGVDPVS-LGLLKPPGEYGADIVVGEGQPLGIPL- 270 (447)
T ss_pred HHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHC-CCEEEEEcChHH-hccCCCcccCCCCEEEECCCcCCCCC-
Confidence 9999999989999999999 8999999999999999999 999988 5443 2222334457899999966664 3
Q ss_pred CCCCceEEEEEecChHHHHHHH----------------------------HHHHhcC-CCCCHHH---HHHHHhcc--CC
Q psy12791 209 GHSDVVMGATVTNDDSLQARLK----------------------------FLQNSMG-VVPSPFD---CWLVTRGL--KT 254 (393)
Q Consensus 209 G~~G~r~G~~~~~~~~~~~~~~----------------------------~~~~~~~-~~~~~~~---~~~~~~~~--~~ 254 (393)
...|.++||++++ +++.+.+. ....... +...... ++..++.+ +.
T Consensus 271 ~~~Gpg~G~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g 349 (447)
T PRK00451 271 SFGGPYLGFFATR-KKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEG 349 (447)
T ss_pred CCCCCCchHHHhh-HHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHH
Confidence 2344469999987 67766531 0000001 0111111 11111111 22
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccc-
Q psy12791 255 LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAES- 333 (393)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 333 (393)
++...++..++++.+.+.|++++++..+ ++ .+..++.+.+..+ ...+.+.|...++...
T Consensus 350 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~---------------~~~~~~~v~~~~~---~~~~~~~L~~~gi~~~~ 409 (447)
T PRK00451 350 LRELAEQNHQKAHYLAERLAEIGGVELF--DG---------------PFFNEFVVRLPKP---AEEVNEALLEKGILGGY 409 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCEEec--CC---------------CeEEEEEEecCCC---HHHHHHHHHhcCCCCCc
Confidence 4556677777888888888877654321 11 0112233444212 2345555443322211
Q ss_pred cCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 334 LGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 334 ~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+..+ . + +. .+++|+|++..+++++++.+.++|+++.
T Consensus 410 ~~~~~---~-~----------------~~-~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 410 DLGRY---Y-P----------------EL-GNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred ccccc---c-C----------------Cc-CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 11100 0 0 01 3689999999999999999999998763
No 228
>KOG0634|consensus
Probab=99.87 E-value=7.8e-20 Score=164.73 Aligned_cols=294 Identities=16% Similarity=0.173 Sum_probs=191.9
Q ss_pred CccccCCCCchHHHHHHHHHHHhC----CC---c-EEEeccHHH-HH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcc
Q psy12791 50 GFEYSRSNNPTRRNLERCIASLEE----AK---H-GLCYSSGLG-AV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAP 119 (393)
Q Consensus 50 ~~~y~~~~~~~~~~lr~~la~~~~----~~---~-~i~~~~G~~-al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~ 119 (393)
..+|+. ..+..+|...+..+.+ .+ + .+++|+|.+ ++ .++..+++.||.|++..++|.+ .-...+
T Consensus 93 alQYg~--s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~----AL~s~~ 166 (472)
T KOG0634|consen 93 ALQYGQ--SSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPS----ALQSME 166 (472)
T ss_pred hhcccc--ccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchH----HHHhcc
Confidence 455654 4677788888888655 11 2 788888866 58 8888999999999999999986 344568
Q ss_pred cCCcEEEeeCCC----CHHHHHhhcC---------CCCcEEEE-ecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCc
Q psy12791 120 KIGLEVDFVDLR----KIENLIKYIK---------PNTKMVWI-ENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNT 182 (393)
Q Consensus 120 ~~g~~v~~~~~~----d~~~l~~~l~---------~~~~~v~l-~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea 182 (393)
..|++++.|+++ ++|.+++.+. +++++++. .+-+||||..++ .++|.++|++| ++++|+||.
T Consensus 167 a~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKy-DfLIVeDdp 245 (472)
T KOG0634|consen 167 ALGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKY-DFLIVEDDP 245 (472)
T ss_pred ccCceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHc-CEEEEecCc
Confidence 889999999887 5777777653 23566665 688999999998 77999999999 999999999
Q ss_pred cCccccc------------------------CCCC---CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh
Q psy12791 183 FLTAYYQ------------------------KSLP---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS 235 (393)
Q Consensus 183 ~~~~~~~------------------------~~~~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~ 235 (393)
|...-+. ..+. .|+.|-..||||.+ .||+|+||+.++ +-+++++-.....
T Consensus 246 Yy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKii--aPGlRlG~it~~-~~~l~ril~~ae~ 322 (472)
T KOG0634|consen 246 YYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKII--APGLRLGWITGN-SLFLKRILDLAEV 322 (472)
T ss_pred cceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhh--cCcceeEEeecC-HHHHHHHhhhcce
Confidence 9853221 0111 25669999999999 499999999998 6666665443332
Q ss_pred cCCCCCHHHHHHHHhc---------cCCHHHHHHHHHHHHHHHHHHHhh-CCCc-ceEeCCCCCCCcchHHHhhhcCCCc
Q psy12791 236 MGVVPSPFDCWLVTRG---------LKTLPCRLKEHERGSIEVAKFLES-HPCV-KGVLHPGLPSHPNHELAKSQWSGTS 304 (393)
Q Consensus 236 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~l~~-~~~~-~~v~~~~l~~~~~~~~~~~~~~~~~ 304 (393)
....++...+.++-.- ++.+.+.+..+.+++..+...|.. +|.- ..+..|. .|
T Consensus 323 ~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~----------------aG 386 (472)
T KOG0634|consen 323 ATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPK----------------AG 386 (472)
T ss_pred eecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCC----------------cc
Confidence 2222333333221111 123333444555555556555543 3443 3343343 24
Q ss_pred ceEEEEEc-------CCHHHHHHHHH-hcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCCh
Q psy12791 305 GMLSFYVN-------GGAEETRIFLE-SLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGY 376 (393)
Q Consensus 305 ~~~~~~~~-------~~~~~~~~~~~-~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~ 376 (393)
-++||+++ ++..+.+.++. .+...++.+..|..+...-... -..-++|+|+++...
T Consensus 387 mFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s----------------~~kiffRls~a~a~~ 450 (472)
T KOG0634|consen 387 MFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESS----------------WSKIFFRLSIAFAEP 450 (472)
T ss_pred eEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccC----------------CCcceEEEEeecCCH
Confidence 56899995 34444444433 3344566666666554431100 013599999999988
Q ss_pred HHHHHHHHH
Q psy12791 377 TDLIADLDQ 385 (393)
Q Consensus 377 ~~~i~~l~~ 385 (393)
|++.+.+++
T Consensus 451 e~l~~g~~r 459 (472)
T KOG0634|consen 451 EKLDEGIER 459 (472)
T ss_pred HHHHHHHHH
Confidence 766655544
No 229
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.87 E-value=3.1e-20 Score=177.52 Aligned_cols=319 Identities=12% Similarity=0.047 Sum_probs=192.8
Q ss_pred CCCCCCccCCeeeeCCCCCC----CCCccccCC--CCchHHHHHH----HHHHHhCCCcEEE-eccHHHHH-HHHHHhcC
Q psy12791 28 CVIPPIILSTTFKQNTPGQP----PQGFEYSRS--NNPTRRNLER----CIASLEEAKHGLC-YSSGLGAV-TAVTHLLS 95 (393)
Q Consensus 28 ~~~~p~~~~~~~~~~~~~~~----~~~~~y~~~--~~~~~~~lr~----~la~~~~~~~~i~-~~~G~~al-~~~~~~~~ 95 (393)
+++|.+ ++.+.++....+ .....++|+ +++...+|++ .+|+++|.+.+++ ++||+.|+ .++.++++
T Consensus 35 ~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al~~ 112 (416)
T PRK13034 35 ASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLALLK 112 (416)
T ss_pred ccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHhcC
Confidence 445554 344554443331 223445554 4688899998 9999999998865 58999997 78888999
Q ss_pred CCCeEEEcCCCccchHHHHHHhccc--CCcEE--EeeCC------CCHHHHHhhcCC-CCcEEEEecCCCCcccccCHHH
Q psy12791 96 AGDHIISGDDVYGGTYRYFAQVAPK--IGLEV--DFVDL------RKIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKA 164 (393)
Q Consensus 96 ~gd~vl~~~~~y~~~~~~~~~~~~~--~g~~v--~~~~~------~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~ 164 (393)
+||+|++++.+|.+.. ...++. .+... ..++. .|++++++.+.. ++++|+++.+. +|...|+++
T Consensus 113 ~GD~Vl~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~dl~~ 187 (416)
T PRK13034 113 PGDTILGMSLSHGGHL---THGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELDFAR 187 (416)
T ss_pred CCCEEEEcCccceeee---ecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccCHHH
Confidence 9999999999997521 111111 11111 23333 378888887743 68888886654 478889999
Q ss_pred HHHHHHhCCCcEEEEeCccCcccccCCCC----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc--CC
Q psy12791 165 ISAVVKQHPDILLVLDNTFLTAYYQKSLP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM--GV 238 (393)
Q Consensus 165 l~~l~~~~~~~~livDea~~~~~~~~~~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~--~~ 238 (393)
|.++|+++ |+++++|++++.+....+.. ..+|++++|+||+++|+. +|+++++++.+.++++...... +.
T Consensus 188 l~~la~~~-g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~~~~~~~~~~~~ 263 (416)
T PRK13034 188 FREIADEV-GALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKINSAVFPGLQGG 263 (416)
T ss_pred HHHHHHHc-CCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCC---CeEEEECcHHHHHHHHhhcCCcccCC
Confidence 99999999 99999999988755432211 247999999999996543 6888887666666665432211 11
Q ss_pred CCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC
Q psy12791 239 VPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG 314 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
...+..+..+...++ ....++++..++.+++++.|++. ++. +..+. .-..++.+.+...
T Consensus 264 ~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~-~~~~~---------------~~t~i~~v~~~~~ 326 (416)
T PRK13034 264 PLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYD-LVSGG---------------TDNHLLLVDLRPK 326 (416)
T ss_pred ccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCE-eccCC---------------CCCcEEEEEcCCC
Confidence 222222222222221 12334677788888888888765 332 11110 0135667766321
Q ss_pred HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecC----CChHHHHHHHHHHHHHh
Q psy12791 315 AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV----EGYTDLIADLDQALRKA 390 (393)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~----~~~~~~i~~l~~al~~~ 390 (393)
......+.+.|...++-++.-...+....| ..+..||+|++. ..++++++.+.++++++
T Consensus 327 ~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p-----------------~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~ 389 (416)
T PRK13034 327 GLSGKDAEQALERAGITVNKNTVPGDTESP-----------------FVTSGIRIGTPAGTTRGFGEAEFREIANWILDV 389 (416)
T ss_pred CCCHHHHHHHHHhCCcEEeccCCCCCCcCC-----------------CCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHH
Confidence 112233333333323222110000001111 015689999988 55589999999888765
Q ss_pred h
Q psy12791 391 C 391 (393)
Q Consensus 391 ~ 391 (393)
.
T Consensus 390 ~ 390 (416)
T PRK13034 390 L 390 (416)
T ss_pred H
Confidence 3
No 230
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.87 E-value=1.9e-20 Score=179.16 Aligned_cols=319 Identities=16% Similarity=0.142 Sum_probs=192.5
Q ss_pred CCCC-CC--CCCCCccC-CeeeeCCCCCCCCC-ccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCC
Q psy12791 23 QWRS-QC--VIPPIILS-TTFKQNTPGQPPQG-FEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSA 96 (393)
Q Consensus 23 ~~~~-~~--~~~p~~~~-~~~~~~~~~~~~~~-~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~ 96 (393)
+++| .+ ..+++++. +.+.+++.+.+... +....|+++...++.+.++++.+.+..+++++|++++ .++..+...
T Consensus 40 ~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~ 119 (396)
T PRK02627 40 EYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKY 119 (396)
T ss_pred EEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHH
Confidence 4556 22 25667764 55555544432211 1223456788889999999988876666667777777 555543322
Q ss_pred C-------CeEEEcCCCccchHHHHHHhccc---------CCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccc-c
Q psy12791 97 G-------DHIISGDDVYGGTYRYFAQVAPK---------IGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMT-V 159 (393)
Q Consensus 97 g-------d~vl~~~~~y~~~~~~~~~~~~~---------~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~-~ 159 (393)
+ ++|++.+++|++........... ....+..++..|++++++.+.+++++|++++++||+|. +
T Consensus 120 ~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~ 199 (396)
T PRK02627 120 GHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNP 199 (396)
T ss_pred hcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCcc
Confidence 2 67999999997532211111100 01123445556899999999888999999999999994 5
Q ss_pred cC---HHHHHHHHHhCCCcEEEEeCccCccccc-C--C---CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH
Q psy12791 160 FD---VKAISAVVKQHPDILLVLDNTFLTAYYQ-K--S---LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK 230 (393)
Q Consensus 160 ~~---~~~l~~l~~~~~~~~livDea~~~~~~~-~--~---~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~ 230 (393)
++ +++|.++|+++ |+++|+||+|..+... . . .....|++ ++||.+ | +|+|+||++++ +++++.+.
T Consensus 200 ~~~~~l~~l~~l~~~~-~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~~-~-~G~rig~~~~~-~~~~~~~~ 273 (396)
T PRK02627 200 ADKEYLQALRELCDEN-GILLILDEVQTGMGRTGKLFAYQHYGIEPDIM--TLAKGL-G-GGVPIGAVLAK-EKVADVFT 273 (396)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEEechhcCCCccCceeeehhcCCCCCEE--EEcchh-h-CCcccEEEEEc-HHHHhccC
Confidence 54 89999999999 9999999999864221 1 1 11224544 689999 5 79999999997 77777664
Q ss_pred HHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEE
Q psy12791 231 FLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLS 308 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 308 (393)
..........++..+..+...++.+. ...++..+....+.+.|++... .++.. ...++.|.+++
T Consensus 274 ~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~----------~~~~~~g~~~~ 339 (396)
T PRK02627 274 PGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLE----KYPGI----------KEVRGLGLMIG 339 (396)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHH----hCCCe----------eeeccCcEEEE
Confidence 32222223345666666555544322 1233444444444454443210 00110 01123467788
Q ss_pred EEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 309 FYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
+.+. . ....+.+.+...++.+..+ ..+++|+++++..++++++.+.+.|+
T Consensus 340 i~~~-~--~~~~~~~~l~~~Gv~v~~~---------------------------~~~~lRi~~~~~~~~~~i~~~~~~l~ 389 (396)
T PRK02627 340 IELD-R--PAAEIVKKALEKGLLINVT---------------------------GDNVLRLLPPLIISKEEIDEAVDRLE 389 (396)
T ss_pred EEec-C--cHHHHHHHHHHCCeEEeec---------------------------CCCEEEEECCcccCHHHHHHHHHHHH
Confidence 8883 1 2345555554334443321 13679999988888888887777776
Q ss_pred Hhh
Q psy12791 389 KAC 391 (393)
Q Consensus 389 ~~~ 391 (393)
++.
T Consensus 390 ~~l 392 (396)
T PRK02627 390 EVL 392 (396)
T ss_pred HHH
Confidence 543
No 231
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.86 E-value=7.6e-20 Score=187.86 Aligned_cols=314 Identities=14% Similarity=0.063 Sum_probs=192.7
Q ss_pred CchHHHHHHHHHHHhCCC--c-EEEeccHHHH-H-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 58 NPTRRNLERCIASLEEAK--H-GLCYSSGLGA-V-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~--~-~i~~~~G~~a-l-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
....++.|+.+|+++|++ + .|++|+|+++ + .++..+ +++||+|+++.-.|.+... +...++..|+++..++.+
T Consensus 77 ~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~-~~~~a~~~G~~v~~v~~~ 155 (805)
T PLN02724 77 SDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLG-IREYALEKGAAAIAVDIE 155 (805)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHH-HHHHHHHcCCeEEeccch
Confidence 345788999999999985 3 5788888776 7 444454 6789999999888887664 456667889999998764
Q ss_pred -------------C--HHHHHhhc----------CCCCcEEEEecCCCCcccccCHHHHHHHHHhC-------CCcEEEE
Q psy12791 132 -------------K--IENLIKYI----------KPNTKMVWIENPTNPLMTVFDVKAISAVVKQH-------PDILLVL 179 (393)
Q Consensus 132 -------------d--~~~l~~~l----------~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-------~~~~liv 179 (393)
+ .+++++.+ .+++++|.+++.+|.||.++|++++..+++.. .++++++
T Consensus 156 ~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~v 235 (805)
T PLN02724 156 EAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLL 235 (805)
T ss_pred hccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEe
Confidence 1 13454442 24578999999999999999999775555532 0358999
Q ss_pred eCccCcccccCCCC-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcC---------------------
Q psy12791 180 DNTFLTAYYQKSLP-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMG--------------------- 237 (393)
Q Consensus 180 Dea~~~~~~~~~~~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~--------------------- 237 (393)
|.+++.++....+. .++|+++.|+||+++||.| +|+++.+ +++.+.+.......+
T Consensus 236 DaaQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G--~G~L~vr-~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~r 312 (805)
T PLN02724 236 DAAKGCGTSPPDLSRYPADFVVVSFYKIFGYPTG--LGALLVR-RDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQR 312 (805)
T ss_pred ehhhhcCCCCCChhhcCCCEEEEecceeccCCCC--ceEEEEe-hhhhhhhcCCccCCCceEEEecccceeeccccHHHH
Confidence 99999877643332 5899999999999966889 9999998 666665542211111
Q ss_pred ---CCCCHHHHHHHHhccCCH-----HHHHHHHHHHHHHHHHHHhhCC------CcceEeCCCCCCCcchHHHhhhcCCC
Q psy12791 238 ---VVPSPFDCWLVTRGLKTL-----PCRLKEHERGSIEVAKFLESHP------CVKGVLHPGLPSHPNHELAKSQWSGT 303 (393)
Q Consensus 238 ---~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~~~------~~~~v~~~~l~~~~~~~~~~~~~~~~ 303 (393)
++.+......+..+++.+ ....++..+..+++.+.|.+++ .+. +.-+.-.. . +....
T Consensus 313 fE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~-iyg~~~~~-~-------~~~~r 383 (805)
T PLN02724 313 FEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCV-LYGNHTFK-L-------EFHIQ 383 (805)
T ss_pred hcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEE-EcCCCCCC-C-------Ccccc
Confidence 111111111222222222 2222333344556666666554 121 21111000 0 00124
Q ss_pred cceEEEEEcC------CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChh---------------hHhhcCC
Q psy12791 304 SGMLSFYVNG------GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKE---------------TRDALGI 362 (393)
Q Consensus 304 ~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~---------------~~~~~g~ 362 (393)
+++++|.+.+ ...++..+.+. .++.+..|..|... ....+..+... .....+.
T Consensus 384 ~~ivsFnv~~~~~~~v~~~~v~~l~~~---~gI~vR~G~~Ca~~---~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~ 457 (805)
T PLN02724 384 GPIVTFNLKRADGSWVGHREVEKLASL---SGIQLRTGCFCNPG---ACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGR 457 (805)
T ss_pred cCEEEEEEEcCCCCEeCHHHHHHHHHh---cCcEEeeccccCch---HHHHHcCCCHHHHHHHhhcCCccCchhheecCc
Confidence 6899998864 13345555443 35667766554311 11000000000 0000122
Q ss_pred CCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 363 TDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 363 ~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+.+.||+|+++++|.++|++|.++|++.
T Consensus 458 ~~G~vRvS~g~ynt~eDvd~lv~~l~~~ 485 (805)
T PLN02724 458 PTGAVRVSFGYMSTFEDCQKFIDFIISS 485 (805)
T ss_pred ccceEEEEcCccCCHHHHHHHHHHHHHH
Confidence 3489999999999999999999999874
No 232
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.86 E-value=9.4e-20 Score=173.73 Aligned_cols=285 Identities=19% Similarity=0.151 Sum_probs=177.6
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh----cCCCC----eEEEcCCCccchHHHHHHhccc----CC-
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL----LSAGD----HIISGDDVYGGTYRYFAQVAPK----IG- 122 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~----~~~gd----~vl~~~~~y~~~~~~~~~~~~~----~g- 122 (393)
..+...++.++|+++.+.+..++++||++|+ .++... ..+|| +|++.++.|++........... .+
T Consensus 71 ~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~ 150 (389)
T PRK01278 71 RIPEQERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGF 150 (389)
T ss_pred CChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccC
Confidence 4577889999999988666788888889887 554432 35665 8999999998754322211000 00
Q ss_pred ----cEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccc-ccC---HHHHHHHHHhCCCcEEEEeCccCcccc-cCC--
Q psy12791 123 ----LEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMT-VFD---VKAISAVVKQHPDILLVLDNTFLTAYY-QKS-- 191 (393)
Q Consensus 123 ----~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~-~~~---~~~l~~l~~~~~~~~livDea~~~~~~-~~~-- 191 (393)
..+..++..|++++++.+.+++++|+++.++|++|. ++| +++|.++|++| |+++|+||+|..+.. ...
T Consensus 151 ~~~~~~~~~~~~~d~~~l~~~l~~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~~~ 229 (389)
T PRK01278 151 GPLVPGFDQVPFGDIEALKAAITPNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDEN-GLLLIFDEVQCGMGRTGKLFA 229 (389)
T ss_pred CCCCCCceEeCCCCHHHHHHhhCCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCccee
Confidence 112334556899999999888999999999999994 444 89999999999 999999999985422 111
Q ss_pred ---CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHH
Q psy12791 192 ---LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGS 266 (393)
Q Consensus 192 ---~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 266 (393)
.....|+ .|++|.+ | +|+|+||++++ +++.+.+...........++..+..+...++.+. ...+...+..
T Consensus 230 ~~~~~~~pdi--~t~sK~l-~-~G~~ig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~ 304 (389)
T PRK01278 230 HEWAGVTPDI--MAVAKGI-G-GGFPLGACLAT-EEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMG 304 (389)
T ss_pred ecccCCCCCE--EEEehhc-c-CCcceEEEEEc-HHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 1123454 4789999 4 78999999997 7777766433222233356666666655554331 1233444444
Q ss_pred HHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCccc
Q psy12791 267 IEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAE 346 (393)
Q Consensus 267 ~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~ 346 (393)
..+.+.|+.+.. .++. + ....++.|.++++.+.. ....+.+.+...++.+.++
T Consensus 305 ~~l~~~l~~l~~----~~~~--------~-~~~v~g~G~~~~i~~~~---~~~~~~~~l~~~GV~~~p~----------- 357 (389)
T PRK01278 305 LYLKQKLEGLVD----RFPD--------V-IEEVRGKGLLLGLKCVV---PNRDLVQALRDEGLLTVGA----------- 357 (389)
T ss_pred HHHHHHHHHHHh----hCCC--------c-eeeEecccEEEEEEEec---CHHHHHHHHHHCCeEEeec-----------
Confidence 455555543210 0010 0 00113345677877732 2344555544334332221
Q ss_pred ccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 347 MTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 347 ~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..+.+||+++...++++++.+.+.|+++
T Consensus 358 ----------------~~~~lR~~p~~~~~~~~i~~~l~~l~~~ 385 (389)
T PRK01278 358 ----------------GDNVVRLLPPLIITEEEIDEALERLERA 385 (389)
T ss_pred ----------------CCCEEEEeCCcccCHHHHHHHHHHHHHH
Confidence 1478999998877777777777777654
No 233
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.86 E-value=1.1e-19 Score=176.82 Aligned_cols=162 Identities=20% Similarity=0.231 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHhCCCc-EEEeccHHHH-HH-HH--H-HhcCCCC----eEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 61 RRNLERCIASLEEAKH-GLCYSSGLGA-VT-AV--T-HLLSAGD----HIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 61 ~~~lr~~la~~~~~~~-~i~~~~G~~a-l~-~~--~-~~~~~gd----~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
..++++.+++++|.++ .+..++|+++ +. +. . .+.++|| +|++++++|+. +...++..|++++.++.
T Consensus 115 ~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~----~~~~~~~~G~~vv~v~~ 190 (481)
T PRK04366 115 MYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGT----NPASAAMAGFKVVEIPS 190 (481)
T ss_pred HHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHh----HHHHHHHcCCEEEEeec
Confidence 3566777888899874 5555778776 33 22 2 2356676 99999999985 45557789999999887
Q ss_pred C-----CHHHHHhhcCCCCcEEEEecCCCCcccc-cCHHHHHHHHHhCCCcEEEEeCccCcccc--cCCCCCcCcEEEEc
Q psy12791 131 R-----KIENLIKYIKPNTKMVWIENPTNPLMTV-FDVKAISAVVKQHPDILLVLDNTFLTAYY--QKSLPWGVDIVLYS 202 (393)
Q Consensus 131 ~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~livDea~~~~~~--~~~~~~~~di~~~S 202 (393)
+ |++++++.+++++++|++++|| |||.+ .|+++|.++|+++ |+++++|+++..... ..+...|+|++++|
T Consensus 191 ~~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~-gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~ 268 (481)
T PRK04366 191 NEDGLVDLEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIVHEA-GGLLYYDGANLNAILGKARPGDMGFDVVHLN 268 (481)
T ss_pred CCCCCcCHHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHHHHc-CCEEEEEecChhhhcccCCccccCCCEEEEe
Confidence 4 7899999998899999999998 99987 4799999999999 999999999864321 13445789999999
Q ss_pred ccccccCCCC---ceEEEEEecChHHHHHH
Q psy12791 203 LTKYMNGHSD---VVMGATVTNDDSLQARL 229 (393)
Q Consensus 203 ~sK~~~G~~G---~r~G~~~~~~~~~~~~~ 229 (393)
.||+++++.| --+|+++++ +++.+.+
T Consensus 269 ~hK~l~~P~g~Ggp~~G~l~~~-~~~~~~l 297 (481)
T PRK04366 269 LHKTFSTPHGGGGPGSGPVGVK-EELAPFL 297 (481)
T ss_pred chhhcCCCCCCCCCCeeeeeeh-hhhHhhC
Confidence 9999863321 128899887 5666554
No 234
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.86 E-value=6.5e-19 Score=167.28 Aligned_cols=211 Identities=17% Similarity=0.089 Sum_probs=148.8
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---- 131 (393)
++++..+||+++++++|.+..+++.+|+.++ .++.++++|||.| +++|.|.+ +.......|++++.++.+
T Consensus 51 ~~~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~----~~~~i~~~Ga~pv~v~i~~~~~ 125 (431)
T cd00617 51 GSKSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDT----TRGHIEANGAVPVDLVIDEAHD 125 (431)
T ss_pred CCCCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccc----hHHHHHhCCCEeEEEecccccc
Confidence 4678899999999999999999999999997 7788889999977 68888875 445567789888877652
Q ss_pred -----------CHHHHHhhcCCC----CcEEEEecCCCCc-ccccC---HHHHHHHHHhCCCcEEEEeCccCcc------
Q psy12791 132 -----------KIENLIKYIKPN----TKMVWIENPTNPL-MTVFD---VKAISAVVKQHPDILLVLDNTFLTA------ 186 (393)
Q Consensus 132 -----------d~~~l~~~l~~~----~~~v~l~~p~npt-G~~~~---~~~l~~l~~~~~~~~livDea~~~~------ 186 (393)
|++++++.+.++ +++|++++|+||+ |.+++ +++|.++|+++ |++||.|+++...
T Consensus 126 ~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~-gi~li~DaAr~~~na~~i~ 204 (431)
T cd00617 126 AQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKY-GIPVVLDAARFAENAYFIK 204 (431)
T ss_pred cccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEEchhhHhhhhhhh
Confidence 688999999865 7899999999998 89987 45779999999 9999999996532
Q ss_pred -----cccCCC-------CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh-----cCCCCCHHHHHHHH
Q psy12791 187 -----YYQKSL-------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS-----MGVVPSPFDCWLVT 249 (393)
Q Consensus 187 -----~~~~~~-------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 249 (393)
....++ ....|.+..|++|... .+ .+||+++++++++++++..... ..+..+..+...+.
T Consensus 205 ~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~-~~--~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A 281 (431)
T cd00617 205 EREEGYRDKSIAEIAREMFSYADGCTMSAKKDGL-VN--IGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALA 281 (431)
T ss_pred cccccccCCCHHHHHHHhhccCCEEEEEeecCCC-Cc--cceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHH
Confidence 111111 0135666667777652 22 1789999877798888743311 11222333333322
Q ss_pred hccCCH--HHHHHHHHHHHHHHHHHHhhC
Q psy12791 250 RGLKTL--PCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 250 ~~~~~~--~~~~~~~~~~~~~l~~~l~~~ 276 (393)
.+++.. ....++..++++.+.+.|++.
T Consensus 282 ~gL~e~~~~~~l~~~~~~r~~l~~~L~~~ 310 (431)
T cd00617 282 QGLREAVEEDYLRHRVEQVRYLGDRLDEA 310 (431)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 233221 234455555667788888765
No 235
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=1.3e-20 Score=172.49 Aligned_cols=158 Identities=15% Similarity=0.166 Sum_probs=125.4
Q ss_pred CCCchHHHHHHHHHHHhCCCcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--
Q psy12791 56 SNNPTRRNLERCIASLEEAKHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-- 131 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-- 131 (393)
+|+....++++.+|+++|.++.+++++|+++ + .++.+++++||+|+++.++|.+.+ ..+...|+++++++.+
T Consensus 56 ~~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~----~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 56 DPTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVI----NGLVLSGAVPVYLKPERN 131 (294)
T ss_pred CCChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHH----HHHHHCCCEEEEecCccC
Confidence 3567789999999999999888887888765 6 777888999999999999998643 3455678888887542
Q ss_pred ---------CHHHHHhhcC--CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc---CC---CCC
Q psy12791 132 ---------KIENLIKYIK--PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ---KS---LPW 194 (393)
Q Consensus 132 ---------d~~~l~~~l~--~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~---~~---~~~ 194 (393)
|++++++.+. +++++|++++| |++|.++|+++|.++|+++ |+++++||+|+..... .+ ...
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~-g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHR-GLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhc-CCeEEEECcchhhhccCcccCcchhhc
Confidence 6888998885 46899999999 6899999999999999999 9999999999863211 11 124
Q ss_pred cCcEEEEcccccccCCCCceEEEEEec
Q psy12791 195 GVDIVLYSLTKYMNGHSDVVMGATVTN 221 (393)
Q Consensus 195 ~~di~~~S~sK~~~G~~G~r~G~~~~~ 221 (393)
++|+++.|+||+++|+.+ +|++..+
T Consensus 210 ~~div~~S~hK~l~g~~~--~~~l~~~ 234 (294)
T cd00615 210 GADIVVQSTHKTLPALTQ--GSMIHVK 234 (294)
T ss_pred CCcEEEEchhcccchHhH--HHHHHhC
Confidence 789999999999854432 4555554
No 236
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.85 E-value=1.4e-19 Score=171.31 Aligned_cols=282 Identities=15% Similarity=0.113 Sum_probs=176.9
Q ss_pred chHHHHHHHHHHHhCCC--cEEE-ec-cHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHH-hcccCCc-EEEeeCCC
Q psy12791 59 PTRRNLERCIASLEEAK--HGLC-YS-SGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQ-VAPKIGL-EVDFVDLR 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~--~~i~-~~-~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~-~~~~~g~-~v~~~~~~ 131 (393)
...++.|+.++++++.+ +.++ ++ ||+.++ .++..++++++.+++..-.|+.. +.. +++.+|+ +++.++.+
T Consensus 48 ~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~~g~f~~~---~~~~~~~~~g~~~v~~~~~~ 124 (378)
T PRK03080 48 ALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLAWESFGSK---WATDVVKQLKLEDPRVLEAD 124 (378)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEEeCHHHHH---HHHHHHhhcCCCCceEeccC
Confidence 45678999999999974 3444 54 667778 66667777533344445667652 333 3466788 88877654
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEccccc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKY 206 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~ 206 (393)
|+++ ++. +++|.++|..|.||..+|+++|.+ +++ |+++++|.+++.+.....+. ..|+++.|.+||
T Consensus 125 ~g~~~d~~~----i~~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~-g~~~vVDa~qs~G~~pidv~-~iD~~~~s~~K~ 195 (378)
T PRK03080 125 YGSLPDLSA----VDF-DRDVVFTWNGTTTGVRVPVARWIG--ADR-EGLTICDATSAAFALPLDWS-KLDVYTFSWQKV 195 (378)
T ss_pred CCCCCCHhh----cCC-CCCEEEEecCCccceeccchhhcc--ccC-CCeEEEecccccccCCCCHH-HCcEEEEehhhh
Confidence 4444 332 677999999999999999999999 778 99999999999776533333 379999999999
Q ss_pred ccCCCCceEEEEEecChHHHHHHHHHHH-------------------hc-C-C--CCCHHHHHHHHhccC------CHHH
Q psy12791 207 MNGHSDVVMGATVTNDDSLQARLKFLQN-------------------SM-G-V--VPSPFDCWLVTRGLK------TLPC 257 (393)
Q Consensus 207 ~~G~~G~r~G~~~~~~~~~~~~~~~~~~-------------------~~-~-~--~~~~~~~~~~~~~~~------~~~~ 257 (393)
++|++| +|+++.+ ++.++++..... .+ + . .++....+.+...++ .++.
T Consensus 196 l~~P~G--~g~l~v~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~ 272 (378)
T PRK03080 196 LGGEGG--HGMAILS-PRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDA 272 (378)
T ss_pred CCCCCc--eEEEEEC-HHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHH
Confidence 988899 9999998 777776542110 00 1 1 111111111112221 3444
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-HHHHHHHHHhcCccccccccCC
Q psy12791 258 RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-AEETRIFLESLLIFRCAESLGG 336 (393)
Q Consensus 258 ~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~ 336 (393)
+.++..+..+.+.++|++.+.+..+. +. +. ...+.++.|.+++. +.....+...+...++.+..|+
T Consensus 273 i~~r~~~l~~~l~~~l~~~~~~~~~~-~~-~~-----------~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~g~ 339 (378)
T PRK03080 273 LIARTAANASVLYDWAEKTPWATPLV-AD-PA-----------TRSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDIEP 339 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccccc-CC-cc-----------ccCccEEEEEcCCchHHHHHHHHHHHHHcCCeecccc
Confidence 55666666777788887665432111 10 00 01135788887530 0111223333322233333332
Q ss_pred ccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 337 IESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 337 ~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.. ...+.+|+|++.++++++++++.++|+++.
T Consensus 340 ~~-----------------------~~~~~vRis~~~~~t~~di~~l~~al~~~~ 371 (378)
T PRK03080 340 YR-----------------------DAPNGLRIWCGPTVEPADVEALTPWLDWAF 371 (378)
T ss_pred cc-----------------------CCCCcEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 11 014789999999999999999999998753
No 237
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.84 E-value=7.7e-19 Score=168.08 Aligned_cols=285 Identities=15% Similarity=0.133 Sum_probs=180.3
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh---c-----CCCCeEEEcCCCccchHHHHHHh---------cc
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL---L-----SAGDHIISGDDVYGGTYRYFAQV---------AP 119 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~---~-----~~gd~vl~~~~~y~~~~~~~~~~---------~~ 119 (393)
.+...++.+.|+++.+.+..++++||++|+ .++... . ...+.|+..+..|++........ ..
T Consensus 81 ~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~ 160 (403)
T PRK05093 81 NEPALRLAKKLIDATFAERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFG 160 (403)
T ss_pred CHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCC
Confidence 455678999999988777899999999986 444321 1 12356887887777643211111 11
Q ss_pred cCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccccc-C----HHHHHHHHHhCCCcEEEEeCccCccccc-CCC-
Q psy12791 120 KIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVF-D----VKAISAVVKQHPDILLVLDNTFLTAYYQ-KSL- 192 (393)
Q Consensus 120 ~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~-~----~~~l~~l~~~~~~~~livDea~~~~~~~-~~~- 192 (393)
.....+..++.+|++++++.+.+++++|+++ |.||+|.+. + +++|.++|++| |+++|+||+|..+... .+.
T Consensus 161 ~~~~~~~~~~~~d~~~l~~~l~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~~~ 238 (403)
T PRK05093 161 PKPADITHVPFNDLAAVKAVIDDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQH-NALLIFDEVQTGMGRTGDLFA 238 (403)
T ss_pred CCCCCcEEeCCCCHHHHHHHhcCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCCCccchh
Confidence 1223467778889999999998888999988 666776654 3 89999999999 9999999999864221 111
Q ss_pred ----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCH--HHHHHHHHHHH
Q psy12791 193 ----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTL--PCRLKEHERGS 266 (393)
Q Consensus 193 ----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 266 (393)
....| +.|+||.+ | +|+|+||++++ +++.+.+...........++..+..+...++.+ ....++..++.
T Consensus 239 ~~~~~~~pd--i~s~sK~l-~-~G~rig~vv~~-~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~ 313 (403)
T PRK05093 239 YMHYGVTPD--ILTSAKAL-G-GGFPIGAMLTT-AEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARR 313 (403)
T ss_pred hhhcCCCCC--EEEecccc-c-CCcceEEEEEc-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 12245 45899999 5 79999999998 788777753222222234566655554433222 22345556666
Q ss_pred HHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-HHHHHHHHHhcCccccccccCCccccccCcc
Q psy12791 267 IEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-AEETRIFLESLLIFRCAESLGGIESLADLPA 345 (393)
Q Consensus 267 ~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~ 345 (393)
+.+.+.|+++..- ++. + ...++.|.++++.+... ......|.+.+...++.+..+
T Consensus 314 ~~l~~~L~~~~~~----~~~---------~-~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~---------- 369 (403)
T PRK05093 314 QRFVDGLQKINQK----YGV---------F-SEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVA---------- 369 (403)
T ss_pred HHHHHHHHHHHhh----CCC---------e-EeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecC----------
Confidence 6777777653110 000 0 01123456788888422 124556666654434333210
Q ss_pred cccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 346 EMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..+++|+++++..++++++.+.+.|.++
T Consensus 370 -----------------g~~~lRl~~~~~~~~~~i~~~~~~l~~~ 397 (403)
T PRK05093 370 -----------------GPDVLRFAPSLVIEEADIDEGLARFEKA 397 (403)
T ss_pred -----------------CCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 1478999999987788777777777654
No 238
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.83 E-value=1e-18 Score=166.02 Aligned_cols=278 Identities=15% Similarity=0.141 Sum_probs=176.7
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHH-h-cCCCCeEEEcCCCccchHHHHHHhcccCC---------cEEE
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTH-L-LSAGDHIISGDDVYGGTYRYFAQVAPKIG---------LEVD 126 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~-~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g---------~~v~ 126 (393)
+...++.+.+++..+.+..+++++|++++ .++.. . ...+++|++.++.|++............. ..+.
T Consensus 71 ~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (377)
T PRK02936 71 SLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFT 150 (377)
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCce
Confidence 44445555555544445678889999987 55542 2 23346789988888764322211111000 1345
Q ss_pred eeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccccc-CCC-----CCcC
Q psy12791 127 FVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQ-KSL-----PWGV 196 (393)
Q Consensus 127 ~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~-~~~-----~~~~ 196 (393)
.++.+|++++++.+.+++++|+++.+++++|...+ +++|.++|++| |+++|+||+|..+... .+. ....
T Consensus 151 ~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~-~~~lI~DEv~~g~g~~g~~~~~~~~~~~~ 229 (377)
T PRK02936 151 HVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKF-GALLIIDEVQTGIGRTGTLFAYEQFGLDP 229 (377)
T ss_pred EeCCCCHHHHHHhccCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCchhhHHHhhCCCC
Confidence 66777899999999888999999999999988754 99999999999 9999999999753211 111 1234
Q ss_pred cEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCH--HHHHHHHHHHHHHHHHHHh
Q psy12791 197 DIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTL--PCRLKEHERGSIEVAKFLE 274 (393)
Q Consensus 197 di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~ 274 (393)
|++ ++||.+ | +|+|+||++++ +++.+.+...........++..+..+...++.+ ...+++..++...+.+.|+
T Consensus 230 di~--t~sK~l-~-~G~~ig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~ 304 (377)
T PRK02936 230 DIV--TVAKGL-G-NGIPVGAMIGK-KELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQ 304 (377)
T ss_pred cEE--EEcccc-c-CCCccEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 554 689999 5 78999999997 788877643222222234666666665555443 2345555666666666665
Q ss_pred hC----CCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCC
Q psy12791 275 SH----PCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHK 350 (393)
Q Consensus 275 ~~----~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~ 350 (393)
+. +.+..+ ++.|.++++.+..+ ...+.+.+...++.+..+
T Consensus 305 ~~~~~~~~~~~v------------------~~~g~~~~i~~~~~---~~~~~~~l~~~gv~v~~~--------------- 348 (377)
T PRK02936 305 EELEHLECVKNI------------------RGKGLMIGIECTEE---VAPVIEQLREEGLLVLSA--------------- 348 (377)
T ss_pred HHHhhCCcEEeE------------------eecceEEEEEecch---HHHHHHHHHHCCeEEecC---------------
Confidence 42 221111 12356789998422 445555554433332110
Q ss_pred CCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 351 SIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 351 ~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..++||++++...++++++.+.+.|+++
T Consensus 349 ------------g~~~lRi~p~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 349 ------------GPNVIRLLPPLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred ------------CCCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 1478999998888888888888777653
No 239
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.83 E-value=1.4e-18 Score=166.54 Aligned_cols=283 Identities=18% Similarity=0.154 Sum_probs=175.7
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhc----------CCCCeEEEcCCCccchHHHHHHhccc------
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLL----------SAGDHIISGDDVYGGTYRYFAQVAPK------ 120 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~----------~~gd~vl~~~~~y~~~~~~~~~~~~~------ 120 (393)
.+...++++.++++.+.+..++++||+.|. .++.... ..+++|++.+-.|++...........
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~ 151 (400)
T PTZ00125 72 NDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNN 151 (400)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhcc
Confidence 457788999999988888899999999986 5554331 13467888888877643221111110
Q ss_pred ---CCcEEEeeCCCCHHHHHhhcC-CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-cCC
Q psy12791 121 ---IGLEVDFVDLRKIENLIKYIK-PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-QKS 191 (393)
Q Consensus 121 ---~g~~v~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~ 191 (393)
....+..++..|++++++.+. +++++|++++++||||.+.| +++|.++|++| |+++|+||+|..+.. ...
T Consensus 152 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~lli~Dev~~g~g~~G~~ 230 (400)
T PTZ00125 152 FGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKY-NVLLIVDEIQTGLGRTGKL 230 (400)
T ss_pred CCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccchh
Confidence 001234556668999999986 57899999999999999998 99999999999 999999999974311 111
Q ss_pred -----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHH--HHHHHHH
Q psy12791 192 -----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPC--RLKEHER 264 (393)
Q Consensus 192 -----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 264 (393)
.....|+++ ++|+++ .++.|+||++++ +++.+.+...........++..+..+...++.+.. ..++..+
T Consensus 231 ~~~~~~~~~pd~~~--~sK~l~-~g~~~ig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~ 306 (400)
T PTZ00125 231 LAHDHEGVKPDIVL--LGKALS-GGLYPISAVLAN-DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQR 306 (400)
T ss_pred hHHHhcCCCCCEEE--Eccccc-CCCcCcEEEEEc-HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 112346664 679994 444589999997 78888765322211223355555555444433221 1223333
Q ss_pred HHHHHHHHHhhC----CCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhcCccccccccCCccc
Q psy12791 265 GSIEVAKFLESH----PCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESLLIFRCAESLGGIES 339 (393)
Q Consensus 265 ~~~~l~~~l~~~----~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~g~~~s 339 (393)
..+.+.+.|++. +.+..+ .+.|.++++.++. +......+.+.+...++.+.++
T Consensus 307 ~~~~l~~~l~~l~~~~~~~~~~------------------~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~---- 364 (400)
T PTZ00125 307 LGEVFRDGLKELLKKSPWVKEI------------------RGKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKPT---- 364 (400)
T ss_pred HHHHHHHHHHHHHhcCCCeEEE------------------ecccEEEEEEEccCcchHHHHHHHHHHHCCeEEeec----
Confidence 344444444432 211111 2236677888842 2334555666654434333211
Q ss_pred cccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 340 LADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.+++|||+++...++++++.+.+.|.++
T Consensus 365 -----------------------~~~~lRi~~~~~~~~~~i~~~l~~l~~~ 392 (400)
T PTZ00125 365 -----------------------HDNIIRFAPPLVITKEQLDQALEIIKKV 392 (400)
T ss_pred -----------------------CCCEEEEECCccCCHHHHHHHHHHHHHH
Confidence 1478999998777777777666666543
No 240
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.82 E-value=3.6e-18 Score=162.88 Aligned_cols=288 Identities=16% Similarity=0.134 Sum_probs=182.0
Q ss_pred CCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh--c------CCCCeEEEcCCCccchHHHHHHhcc-------
Q psy12791 56 SNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL--L------SAGDHIISGDDVYGGTYRYFAQVAP------- 119 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~--~------~~gd~vl~~~~~y~~~~~~~~~~~~------- 119 (393)
++.+...+|.++|+++.+.+...+++||++|. .++... . ...+.|+..+..|++..........
T Consensus 74 ~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~ 153 (397)
T TIGR03246 74 YTNEPVLRLAKKLVDATFADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQG 153 (397)
T ss_pred cCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccC
Confidence 34567889999999998877899999999996 444322 1 1235677777777764322111111
Q ss_pred --cCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-c---
Q psy12791 120 --KIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-Q--- 189 (393)
Q Consensus 120 --~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~--- 189 (393)
.....+..++.+|++++++.+.+++++|+++.++++.|...+ +++|.++|++| |+++|+||+|..+-. .
T Consensus 154 ~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DEv~tG~Gr~G~~~ 232 (397)
T TIGR03246 154 FAPLPGGIKHAPYNDLAAAKALISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRH-NALLIFDEVQTGVGRTGELY 232 (397)
T ss_pred CCCCCCceEEeCCCCHHHHHHHhccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEechhhcCCccccch
Confidence 011245667778999999999888999999988877786653 99999999999 999999999954311 0
Q ss_pred --CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCH--HHHHHHHHHH
Q psy12791 190 --KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTL--PCRLKEHERG 265 (393)
Q Consensus 190 --~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 265 (393)
.......|++ +++|.+ | .|+++|+++++ +++.+.+...........++..+..+...++.+ ....++..++
T Consensus 233 a~~~~gv~pDi~--t~~K~l-g-gG~pigav~~~-~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~ 307 (397)
T TIGR03246 233 AYMHYGVTPDIL--TSAKAL-G-GGFPIGAMLTT-TEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQR 307 (397)
T ss_pred hhhhcCCCCCEE--Eeehhh-h-CCcceeEEEEc-HHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 1112245665 789999 4 58999999997 788776643211111123555555554444322 2245555566
Q ss_pred HHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-HHHHHHHHHhcCccccccccCCccccccCc
Q psy12791 266 SIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-AEETRIFLESLLIFRCAESLGGIESLADLP 344 (393)
Q Consensus 266 ~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~ 344 (393)
.+.+.+.|+++.. .++- ..+.++.|.++.+.+... ......+.+.+...++-+..
T Consensus 308 ~~~l~~~L~~l~~----~~~~----------~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~---------- 363 (397)
T TIGR03246 308 HDLFVDGLEKINA----RYNV----------FSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALI---------- 363 (397)
T ss_pred HHHHHHHHHHHHh----cCCC----------eEeeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEee----------
Confidence 6666666664321 0000 011134566777777321 23455666655443332211
Q ss_pred ccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 345 AEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..++.+|+++++..++++++.+.++|++.
T Consensus 364 -----------------~g~~~lR~~p~~~~t~~~i~~~~~~l~~~ 392 (397)
T TIGR03246 364 -----------------AGPNVVRFAPSLVISDDDIDEGLARFERA 392 (397)
T ss_pred -----------------cCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 01468999999999988888888887654
No 241
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.81 E-value=9.2e-18 Score=160.56 Aligned_cols=287 Identities=14% Similarity=0.122 Sum_probs=178.7
Q ss_pred CCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh--c------CCCCeEEEcCCCccchHHHHHHhcccC-----
Q psy12791 56 SNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL--L------SAGDHIISGDDVYGGTYRYFAQVAPKI----- 121 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~--~------~~gd~vl~~~~~y~~~~~~~~~~~~~~----- 121 (393)
+.++...+|.++|+++.+.+..++++||++|+ .++... . ..+++|+..+..|++.......+....
T Consensus 78 ~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~ 157 (406)
T PRK12381 78 YTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQD 157 (406)
T ss_pred cCCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccC
Confidence 34566788999999988777788889999986 444321 1 134678888888887542211111100
Q ss_pred -C---cEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccccc--C---HHHHHHHHHhCCCcEEEEeCccCcccc-cCC
Q psy12791 122 -G---LEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVF--D---VKAISAVVKQHPDILLVLDNTFLTAYY-QKS 191 (393)
Q Consensus 122 -g---~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~--~---~~~l~~l~~~~~~~~livDea~~~~~~-~~~ 191 (393)
+ ..+..++..|++++++.+.+++++|+++ |.|++|.+. | +++|.++|++| |+++|+||+|..+.. ...
T Consensus 158 ~~~~~~~~~~~~~~d~~~l~~~l~~~~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~-~~llI~DEv~tG~gr~G~~ 235 (406)
T PRK12381 158 FAPLPPDIRHAAYNDLNSASALIDDQTCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRH-NALLIFDEVQTGVGRTGEL 235 (406)
T ss_pred CCCCCCCeeEeCCCCHHHHHHhccCCeeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEcchhhCCCCCcch
Confidence 0 1245566779999999998788888885 788887654 2 89999999999 999999999965311 111
Q ss_pred -----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHH
Q psy12791 192 -----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHER 264 (393)
Q Consensus 192 -----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 264 (393)
.....|+ .|++|.+ | +|+|+|+++++ +++.+.+...........++..+..+...++.+. ..+++..+
T Consensus 236 ~~~~~~~v~pDi--~t~sK~l-~-gG~~ig~~~~~-~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~ 310 (406)
T PRK12381 236 YAYMHYGVTPDV--LTTAKAL-G-GGFPIGAMLTT-EKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQ 310 (406)
T ss_pred hhhHhhCCCCCE--EEehhhh-h-CCCceEEEEEc-HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 1123455 5899999 4 68999999997 7888776532222222345666655555443322 23455555
Q ss_pred HHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-HHHHHHHHHhcCccccccccCCccccccC
Q psy12791 265 GSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-AEETRIFLESLLIFRCAESLGGIESLADL 343 (393)
Q Consensus 265 ~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~~~s~~~~ 343 (393)
+.+.+.+.|+++.. .++. ..+.++.|.++++.+... ......+.+.+...++.+...
T Consensus 311 ~~~~l~~~L~~l~~----~~~~----------~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~-------- 368 (406)
T PRK12381 311 RHDWFVERLNTINA----RYGL----------FSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA-------- 368 (406)
T ss_pred HHHHHHHHHHHHHh----hCCC----------EEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC--------
Confidence 66666666654310 0000 011134567788888421 124456666555444333210
Q ss_pred cccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 344 PAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.++.||++++...++++++.+.+.|+++
T Consensus 369 -------------------g~~~lRl~p~~~~t~~~i~~~~~~l~~~ 396 (406)
T PRK12381 369 -------------------GPNVVRFAPALNISEEEITTGLDRFARA 396 (406)
T ss_pred -------------------CCCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 1468999999877777777666666543
No 242
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.81 E-value=1.6e-17 Score=152.49 Aligned_cols=241 Identities=17% Similarity=0.198 Sum_probs=173.7
Q ss_pred CCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--cEE-EeccHHHHH-HHHHHhcCCCCeEEEcC
Q psy12791 29 VIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK--HGL-CYSSGLGAV-TAVTHLLSAGDHIISGD 104 (393)
Q Consensus 29 ~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~--~~i-~~~~G~~al-~~~~~~~~~gd~vl~~~ 104 (393)
..-|...++.+.+++..... ...+.--.....++.+.|...++.+ +.+ +.++|+.++ .++..+++|||+|++..
T Consensus 10 ~PGP~~v~~~V~~am~~~~~--~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~ 87 (383)
T COG0075 10 TPGPVPVPPRVLLAMARPMV--GHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVV 87 (383)
T ss_pred eCCCCCCCHHHHHHhcCCCC--CCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEe
Confidence 34455566667766655411 1122111245677888888889877 444 447778888 88889999999998877
Q ss_pred CCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC--CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEE
Q psy12791 105 DVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP--NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILL 177 (393)
Q Consensus 105 ~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~l 177 (393)
....+. .+.++++++|.+++.+... |+++++++++. +.++|.++|.-.+||...|+++|.+++++| |.++
T Consensus 88 nG~FG~--R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~-g~l~ 164 (383)
T COG0075 88 NGKFGE--RFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEH-GALL 164 (383)
T ss_pred CChHHH--HHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHc-CCEE
Confidence 655443 5788899999999988775 89999999984 478999999999999999999999999999 9999
Q ss_pred EEeCccCcccccCC-CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH------------HHhc---CCCC-
Q psy12791 178 VLDNTFLTAYYQKS-LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL------------QNSM---GVVP- 240 (393)
Q Consensus 178 ivDea~~~~~~~~~-~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~------------~~~~---~~~~- 240 (393)
|||.+-+.+..... .+++.|+++.+..|+++++|| +|++..+ ++..+.+... ..++ +..+
T Consensus 165 iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPG--la~v~~S-~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~ 241 (383)
T COG0075 165 IVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPG--LAFVAVS-ERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPY 241 (383)
T ss_pred EEEecccCCCcccchhhcCccEEEecCchhccCCCc--cceeEEC-HHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCC
Confidence 99999886544333 347899999999999999999 9999987 6555555321 1111 1111
Q ss_pred -CHHHHHH-HHhcc-----CCHHHHHHHHHHHHHHHHHHHhhCC
Q psy12791 241 -SPFDCWL-VTRGL-----KTLPCRLKEHERGSIEVAKFLESHP 277 (393)
Q Consensus 241 -~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~ 277 (393)
.+....+ +...+ +.++.+++++..+...+++.++...
T Consensus 242 Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alG 285 (383)
T COG0075 242 TPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALG 285 (383)
T ss_pred CCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1222211 11122 3367788999999999999888653
No 243
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.81 E-value=6.9e-18 Score=163.37 Aligned_cols=284 Identities=15% Similarity=0.093 Sum_probs=171.5
Q ss_pred HHHHHHHHhCCC-cEEEe----ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhc------ccCCcEEEeeCCC
Q psy12791 64 LERCIASLEEAK-HGLCY----SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVA------PKIGLEVDFVDLR 131 (393)
Q Consensus 64 lr~~la~~~~~~-~~i~~----~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~------~~~g~~v~~~~~~ 131 (393)
.|+.++++++++ +.+.+ ++|+++. .++.+++++||+|++.+..|++......... ...+.++..++.+
T Consensus 85 ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~ 164 (452)
T PTZ00094 85 CQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN 164 (452)
T ss_pred HHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC
Confidence 567899999987 44433 4688776 6678889999999999888876432211110 0112344454444
Q ss_pred -----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC-----CCCCcCcEEE
Q psy12791 132 -----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK-----SLPWGVDIVL 200 (393)
Q Consensus 132 -----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~-----~~~~~~di~~ 200 (393)
|++++++.+.+ ++++|++. ++.+|...|+++|.++|+++ |+++++|++|+.+.... ++ .++|+++
T Consensus 165 ~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~-ga~l~vDaaq~~G~i~~~~~~~~~-~~~D~l~ 240 (452)
T PTZ00094 165 EKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSV-GAYLMADIAHTSGLVAAGVLPSPF-PYADVVT 240 (452)
T ss_pred CCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHc-CCEEEEeccchhccccCCCCCCCC-CCCcEEE
Confidence 88999998854 57777764 34589999999999999999 99999999999876522 22 2689999
Q ss_pred EcccccccCCCCceEEEEEecChHHHHHHHHHH-----HhcCCCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHH
Q psy12791 201 YSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ-----NSMGVVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVA 270 (393)
Q Consensus 201 ~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~ 270 (393)
.|+|||+.|+. +|+++++ +.+.+.+.... ..+.+...+...+.+..+++ ......++..+++..+.
T Consensus 241 ~S~hK~l~GP~---Gg~l~~~-~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~ 316 (452)
T PTZ00094 241 TTTHKSLRGPR---SGLIFYR-KKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALA 316 (452)
T ss_pred cCCccCCCCCC---ceEEEEe-cccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHH
Confidence 99999997765 4667766 44433332111 11111222222222222222 23345566667778888
Q ss_pred HHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhcCccccccccCCccccccCcccccC
Q psy12791 271 KFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTH 349 (393)
Q Consensus 271 ~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~ 349 (393)
+.|... ++. +..++ .. ....++.|...+ +.+.....++.. ++.++.-+. .+.+.
T Consensus 317 ~~L~~~-g~~-v~~~~-~~------------~~~~~v~~~~~~~~~~~~~~~L~~~---gI~vs~~~~---p~~~~---- 371 (452)
T PTZ00094 317 AALEKR-GYD-LVTGG-TD------------NHLVLVDLRPFGITGSKMEKLLDAV---NISVNKNTI---PGDKS---- 371 (452)
T ss_pred HHHHhC-CcE-EecCC-CC------------CceEeecCCcCCCCHHHHHHHHHHC---CcEEecccC---CCCCc----
Confidence 888653 332 22221 00 011334444432 334455555433 333321111 00000
Q ss_pred CCCChhhHhhcCCCCCeEEEEecCCCh----HHHHHHHHHHHHHhh
Q psy12791 350 KSIPKETRDALGITDNLVRLSVGVEGY----TDLIADLDQALRKAC 391 (393)
Q Consensus 350 ~~~~~~~~~~~g~~~~~iRls~~~~~~----~~~i~~l~~al~~~~ 391 (393)
...++.||+|++..++ +++++.+.++|.++.
T Consensus 372 -----------~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~ 406 (452)
T PTZ00094 372 -----------ALNPSGVRLGTPALTTRGAKEKDFKFVADFLDRAV 406 (452)
T ss_pred -----------CCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 1125899999999887 999999999998764
No 244
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.81 E-value=2.8e-18 Score=162.75 Aligned_cols=311 Identities=16% Similarity=0.114 Sum_probs=186.2
Q ss_pred CCCC-CCC--CCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCC-Cc--EEEeccHHHHH-HHHHHh--
Q psy12791 23 QWRS-QCV--IPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEA-KH--GLCYSSGLGAV-TAVTHL-- 93 (393)
Q Consensus 23 ~~~~-~~~--~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~-~~--~i~~~~G~~al-~~~~~~-- 93 (393)
.++| .++ ...++..+.+.+++.+.+.. +..+++....++++.+|+.+.. ++ .++++||++++ .++...
T Consensus 30 ~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~---~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~ 106 (375)
T PRK04260 30 KYLDFSSGIGVTNLGFHPQVQQALQKQAGL---IWHSPNLYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARK 106 (375)
T ss_pred EEEECCCCcccccCCCCHHHHHHHHHHHHh---cCcccCccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHH
Confidence 4566 222 44555666666655544322 1122334456678888876533 33 45678888886 444322
Q ss_pred cCCCCeEEEcCCCccchHHHHHHhc------ccCCc---EEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 94 LSAGDHIISGDDVYGGTYRYFAQVA------PKIGL---EVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 94 ~~~gd~vl~~~~~y~~~~~~~~~~~------~~~g~---~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
...+++|++.+..|++......... +.++. .+...+.+|++++++.+.+++++|++++++|++|.+.+
T Consensus 107 ~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~~~~ 186 (375)
T PRK04260 107 ATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKD 186 (375)
T ss_pred hcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCCeEEEEECCeECCCCCcCCCHH
Confidence 3456788988888876432211111 01111 12233455899999988778899999999999999876
Q ss_pred -HHHHHHHHHhCCCcEEEEeCccCccccc-CCC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH
Q psy12791 162 -VKAISAVVKQHPDILLVLDNTFLTAYYQ-KSL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN 234 (393)
Q Consensus 162 -~~~l~~l~~~~~~~~livDea~~~~~~~-~~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~ 234 (393)
++++.++|+++ |+++|+||+|..+... .+. ....|++ ||||.+ | +|+|+||++++ +++.+.+.....
T Consensus 187 ~l~~~~~l~~~~-~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l-~-~G~~ig~~~~~-~~~~~~~~~~~~ 260 (375)
T PRK04260 187 FVKALADYCQET-GILLIVDEVQTGMGRTGKLYAFEHYGIEPDIF--TLAKGL-A-NGVPVGAMLAK-SSLGGAFGYGSH 260 (375)
T ss_pred HHHHHHHHHHHc-CCEEEEechhhCCCcccchhhhHhhCCCCCEE--Eecccc-c-CCcceEEEEEc-HHHHhhcCCCCC
Confidence 89999999999 9999999999753211 111 1235644 899999 4 57999999998 777776643212
Q ss_pred hcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHH----hhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEE
Q psy12791 235 SMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFL----ESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLS 308 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l----~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 308 (393)
......++..+..+...++.+. ..+++..++.+.+.+.+ ..++.+..+ .+.|.+++
T Consensus 261 ~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~~g~~~~ 322 (375)
T PRK04260 261 GSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTV------------------RGLGYMIG 322 (375)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE------------------eccceEEE
Confidence 1222335666655555553321 23344444444444444 333222211 22367789
Q ss_pred EEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 309 FYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
+.+..+ ...+.+.+...++.+... ..+.+|++++...++++++.+.+.++
T Consensus 323 ~~~~~~---~~~~~~~l~~~Gi~v~~~---------------------------~~~~lR~~~~~~~t~~~i~~~l~~l~ 372 (375)
T PRK04260 323 IETTAD---LSQLVEAARDKGLIVLTA---------------------------GTNVIRLLPPLTLTKEEIEQGIAILS 372 (375)
T ss_pred EEecCc---HHHHHHHHHhCCCEEecC---------------------------CCCEEEEcCCCccCHHHHHHHHHHHH
Confidence 888322 344555554434333210 14789999988888888888888876
Q ss_pred Hh
Q psy12791 389 KA 390 (393)
Q Consensus 389 ~~ 390 (393)
++
T Consensus 373 ~~ 374 (375)
T PRK04260 373 EV 374 (375)
T ss_pred Hh
Confidence 54
No 245
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.80 E-value=2.5e-18 Score=161.47 Aligned_cols=278 Identities=14% Similarity=0.125 Sum_probs=171.3
Q ss_pred chHHHHHHHHHHHhCCC--cEEEecc--HHHHH-HHHHHhcC---CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 59 PTRRNLERCIASLEEAK--HGLCYSS--GLGAV-TAVTHLLS---AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~--~~i~~~~--G~~al-~~~~~~~~---~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
...+++|+.++++++.+ +.+++++ |+.++ .++..++. +||+|++. .|.. .+...++..|++++.++.
T Consensus 44 ~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g--~~~~---~~~~~a~~~g~~~~~~~~ 118 (355)
T cd00611 44 AIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTG--AWSA---KAAKEAKRYGGVVVIVAA 118 (355)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECC--HHHH---HHHHHHHhcCCCcEEEec
Confidence 45778999999999973 4566644 45568 66677776 55555542 1211 233467888998888775
Q ss_pred C------C-HHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcc
Q psy12791 131 R------K-IENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSL 203 (393)
Q Consensus 131 ~------d-~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~ 203 (393)
+ + ++..+..+.+++++|.+++..|.||...+ ++++.+ |+++++|.+++.+.....++ ..++.+.|.
T Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~-----~i~~~~-g~~~~VDa~qs~g~~~idv~-~~~~~~ss~ 191 (355)
T cd00611 119 KEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD-----EVPDTG-GVPLVADMSSNILSRPIDVS-KFGVIYAGA 191 (355)
T ss_pred ccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc-----eecccC-CCeEEEEccccccCCCCCHH-HhCEEEeec
Confidence 3 2 33333456678999999999999999853 455568 99999999999876533322 234677779
Q ss_pred cccccCCCCceEEEEEecChHHHHHHHHH-------HH-----hcCCCCCHHHHHHHHhccC------CHHHHHHHHHHH
Q psy12791 204 TKYMNGHSDVVMGATVTNDDSLQARLKFL-------QN-----SMGVVPSPFDCWLVTRGLK------TLPCRLKEHERG 265 (393)
Q Consensus 204 sK~~~G~~G~r~G~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 265 (393)
+|++ ||+| +|+++.+ +++.+++... .. ....+++....+.+.++++ .++.+.++..+.
T Consensus 192 ~K~l-GP~G--~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l 267 (355)
T cd00611 192 QKNL-GPAG--VTVVIVR-KDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQK 267 (355)
T ss_pred cccc-CCCc--eEEEEEC-HHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9999 7999 9999998 7766654321 00 0112222222222222222 355556666777
Q ss_pred HHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcc
Q psy12791 266 SIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPA 345 (393)
Q Consensus 266 ~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~ 345 (393)
++.+.+.|+++|++. ..+. .+. ...+.++.|.+++ ......+++.+...++....+.
T Consensus 268 ~~~l~~~l~~~~gl~--~~~~---~~~--------~rs~~vvsf~~~~-~~l~~~~~~~~~r~G~~~~~~~--------- 324 (355)
T cd00611 268 AQLLYDTIDNSNGFY--RGPV---DKR--------ARSRMNVPFRLGK-EELEKEFLKEAEAAGMIGLKGH--------- 324 (355)
T ss_pred HHHHHHHHHhCcccc--ccCC---CHH--------HcCceEEEEEcCC-hhhhHHHHHHHHHCCCcccCCC---------
Confidence 888888888776531 0110 000 0113458888843 2122333332222222211110
Q ss_pred cccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 346 EMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+ ..+.+|+|++.++++++|+.|.++|+++.
T Consensus 325 ---------------~-~~g~vR~S~~~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 325 ---------------R-SVGGIRASIYNALSLEGVQALADFMKEFQ 354 (355)
T ss_pred ---------------c-ccCeEEEEccCCCCHHHHHHHHHHHHHHh
Confidence 0 14789999999999999999999999864
No 246
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.80 E-value=1.9e-18 Score=144.88 Aligned_cols=154 Identities=25% Similarity=0.298 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHh--CCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCC-----
Q psy12791 61 RRNLERCIASLE--EAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRK----- 132 (393)
Q Consensus 61 ~~~lr~~la~~~--~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d----- 132 (393)
..++++.+++++ +.+..+++++|+.++ .++..+.+++++|++++++|++... ..++..|++++.++.++
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ 78 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW---VAAELAGAKPVPVPVDDAGYGG 78 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh---hHHHhcCCEEEEeccCCCCccc
Confidence 468999999999 656777777777788 6677777789999999999987432 45678899999888751
Q ss_pred H--HHHHhhc-CCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC----CCCCcCcEEEEcccc
Q psy12791 133 I--ENLIKYI-KPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK----SLPWGVDIVLYSLTK 205 (393)
Q Consensus 133 ~--~~l~~~l-~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~----~~~~~~di~~~S~sK 205 (393)
. +.+++.. .++++++++++++|++|...|.++|.++|+++ ++++++|++|..+.... ....++|+++.|++|
T Consensus 79 ~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~K 157 (170)
T cd01494 79 LDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEY-GILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHK 157 (170)
T ss_pred hhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHc-CCEEEEecccccccccccccccccccCCEEEEEccc
Confidence 1 2443333 45789999999999999999999999999999 99999999999866543 333578999999999
Q ss_pred cccCCCCceEEEEEec
Q psy12791 206 YMNGHSDVVMGATVTN 221 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~ 221 (393)
+++ .+| +|+++++
T Consensus 158 ~~~-~~~--~G~l~~~ 170 (170)
T cd01494 158 NLG-GEG--GGVVIVK 170 (170)
T ss_pred ccC-CCc--eEEEEeC
Confidence 995 454 9999864
No 247
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.79 E-value=4.2e-17 Score=152.15 Aligned_cols=279 Identities=14% Similarity=0.064 Sum_probs=182.6
Q ss_pred chHHHHHHHHHHHhCCC--c-EEEecc-HHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC---
Q psy12791 59 PTRRNLERCIASLEEAK--H-GLCYSS-GLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL--- 130 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~--~-~i~~~~-G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~--- 130 (393)
...+++++.++++++.+ + .+++++ |+.++ .++..++.+||++++......+. .+...++.+|+ +..+..
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~--r~~~~a~~~g~-~~~~~~~~~ 113 (349)
T TIGR01364 37 AVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSK--KAAKEAKKYGV-VNVVASGKE 113 (349)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHH--HHHHHHHHhCC-cEEEecccc
Confidence 46788899999999963 3 444534 66678 77788888999987766555443 35778888898 555442
Q ss_pred ------CCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEccc
Q psy12791 131 ------RKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLT 204 (393)
Q Consensus 131 ------~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~s 204 (393)
.++++++ +++++++|.++|..+.||...+ ++++.+ +++++||.+++.+.....++ ..|+++.|.+
T Consensus 114 ~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~-----~l~~~~-~~l~iVDavss~g~~~id~~-~~d~~~~ssq 184 (349)
T TIGR01364 114 GNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR-----ELPDVK-NAPLVADMSSNILSRPIDVS-KFGLIYAGAQ 184 (349)
T ss_pred CCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc-----eecccC-CCeEEEEccccccCccCCHH-HccEEEEecc
Confidence 1445444 3457999999999999999887 677788 99999999999766533332 3569999999
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHH-------H--H---hcCCCCCHHHHHHHHhcc-----C-CHHHHHHHHHHHH
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKFL-------Q--N---SMGVVPSPFDCWLVTRGL-----K-TLPCRLKEHERGS 266 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~~-------~--~---~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~ 266 (393)
|++ ||+| +|+++.+ +++++++... . . ....+++....+.+...+ + .++.+.+++.+..
T Consensus 185 K~l-gP~G--lg~l~~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~ 260 (349)
T TIGR01364 185 KNI-GPAG--LTVVIVR-KDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKA 260 (349)
T ss_pred ccc-CCCc--eEEEEEC-HHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 999 6999 9999998 7776655221 1 0 011122222222222222 2 3666677777788
Q ss_pred HHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCccc
Q psy12791 267 IEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAE 346 (393)
Q Consensus 267 ~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~ 346 (393)
+.+.++|+..+++.. +... +. ...+.++.|.+++ ......+++.+...+++...|..
T Consensus 261 ~~l~~~l~~~~gl~~---~~~~--~~--------~rs~~v~sf~~~~-~~~~~~~~~~~~~~Gi~~~~~~~--------- 317 (349)
T TIGR01364 261 QLLYDTIDNSNGFYR---NPVD--PR--------NRSRMNVVFTLGN-EELEKRFLKEAEERGLVSLKGHR--------- 317 (349)
T ss_pred HHHHHHHHhCCCeec---cCCC--HH--------HcCCeEEEEecCC-hhHhHHHHHHHHHCCCcccCCcc---------
Confidence 888888988765321 1100 00 0113568888853 22224454444433433222211
Q ss_pred ccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 347 MTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 347 ~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
..+.+|+|++.++++++|+.|.++|+++.+
T Consensus 318 ----------------~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 318 ----------------SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred ----------------ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 146899999999999999999999998754
No 248
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.79 E-value=2.6e-17 Score=154.34 Aligned_cols=279 Identities=14% Similarity=0.073 Sum_probs=179.4
Q ss_pred chHHHHHHHHHHHhCCC--c-EEEe-ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--
Q psy12791 59 PTRRNLERCIASLEEAK--H-GLCY-SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-- 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~--~-~i~~-~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-- 131 (393)
...+++++.++++++.+ . .+++ ++|+.++ .++..++.+||++++......+. .+.+.++++|.. ..+..+
T Consensus 48 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~--r~~~~a~~~g~~-~~~~~~~~ 124 (360)
T PRK05355 48 AVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSK--KAIKEAKKYGEV-NVAASSED 124 (360)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHH--HHHHHHHHhCCc-eEEecccc
Confidence 56788999999999963 3 4444 3444458 77888999998887665544433 356778888865 333221
Q ss_pred ----CHHHHHh-hcCCCCcEEEEecCCCCccccc-CHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccc
Q psy12791 132 ----KIENLIK-YIKPNTKMVWIENPTNPLMTVF-DVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTK 205 (393)
Q Consensus 132 ----d~~~l~~-~l~~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK 205 (393)
+..++++ .+++++++|.++|..+.||... |+++| + |+++++|.+++.+....+.+ ..|+++.|.+|
T Consensus 125 ~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~~i~~i------~-g~l~vVDavss~g~~~idv~-~~d~~~~ssqK 196 (360)
T PRK05355 125 DGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHELPDT------G-DVPLVADMSSDILSRPIDVS-KFGLIYAGAQK 196 (360)
T ss_pred cCCCCCCChhhccCCCCCCEEEEccCCCcceEecCccccc------C-CCcEEEEcCccccCccCCHH-HccEEEEeccc
Confidence 2333434 6777899999999999999998 66666 7 99999999999776533332 34699999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHH-H---------H--hcCCCCCHHHHHHHHhcc-----C-CHHHHHHHHHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFL-Q---------N--SMGVVPSPFDCWLVTRGL-----K-TLPCRLKEHERGSI 267 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~-~---------~--~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~ 267 (393)
++ ||+| +|+++.+ +++++++... . . .+-.+++....+.+.+.+ + .++.+.+++.+.++
T Consensus 197 ~l-gP~G--lg~l~~s-~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~ 272 (360)
T PRK05355 197 NI-GPAG--LTIVIVR-EDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAA 272 (360)
T ss_pred cc-cCCc--eEEEEEC-HHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 99 6999 9999998 6766655331 1 0 011222222222222222 2 35666777777888
Q ss_pred HHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccc
Q psy12791 268 EVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEM 347 (393)
Q Consensus 268 ~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~ 347 (393)
.+.++|+.++.......+. ...+.++.|.+++ ......+++.+...++....|..
T Consensus 273 ~l~~~l~~~~~~~~~~~~~--------------~rs~~v~sf~~~~-~~~~~~~~~~~~~~Gi~~~~~~~---------- 327 (360)
T PRK05355 273 LLYDAIDSSDFYRNPVAPE--------------DRSRMNVPFTLAD-EELDKKFLAEAKAAGLVGLKGHR---------- 327 (360)
T ss_pred HHHHHHHhCCCcccCCChh--------------hcCCcEEEEEcCC-hHHHHHHHHHHHHCCCcccCCCC----------
Confidence 8888888766211110000 0123568888853 32334454443322222111100
Q ss_pred cCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 348 THKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 348 ~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
..+.+|+|++.+++.++|+.|.++|+++.+
T Consensus 328 ---------------~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 328 ---------------SVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred ---------------ccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 147899999999999999999999998753
No 249
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.78 E-value=4.7e-17 Score=154.98 Aligned_cols=290 Identities=17% Similarity=0.058 Sum_probs=183.7
Q ss_pred chHHHHHHHHHHHhCCC---cEEEe--ccH-HHHH-HHHHHhc--------CCC-----CeEEEcCCCccchHHHHHHhc
Q psy12791 59 PTRRNLERCIASLEEAK---HGLCY--SSG-LGAV-TAVTHLL--------SAG-----DHIISGDDVYGGTYRYFAQVA 118 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~---~~i~~--~~G-~~al-~~~~~~~--------~~g-----d~vl~~~~~y~~~~~~~~~~~ 118 (393)
...+++++.+|+++|.+ +.+.+ ||| ++++ .++.+.. ..| .+|++++.+|.+ +.+.+
T Consensus 80 ~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~s----v~ka~ 155 (431)
T TIGR01788 80 EIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVC----WEKFA 155 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHH----HHHHH
Confidence 34456778899999987 23332 455 5555 5543321 112 368999989985 56677
Q ss_pred ccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCC-----CcEEEEeCccCccc
Q psy12791 119 PKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHP-----DILLVLDNTFLTAY 187 (393)
Q Consensus 119 ~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-----~~~livDea~~~~~ 187 (393)
+..|++++.++.+ |+++|++.+++++.+|+++..||.||.+.|+++|.++|++++ ++++++|.+|+.+.
T Consensus 156 ~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~ 235 (431)
T TIGR01788 156 RYFDVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFI 235 (431)
T ss_pred HHcCceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHH
Confidence 7789888888764 689999999989999999999999999999999999999972 69999999999643
Q ss_pred c-----cCCC---CCcCcEEEEcccccccCCCCceEEEEEecChH-HHHHHHHHHHhcCCC-------CC-----HHHHH
Q psy12791 188 Y-----QKSL---PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDS-LQARLKFLQNSMGVV-------PS-----PFDCW 246 (393)
Q Consensus 188 ~-----~~~~---~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~-~~~~~~~~~~~~~~~-------~~-----~~~~~ 246 (393)
. ..+. ..++|.+..|.||++.|+.| +|+++.++++ +.+.+.....+.+.. .+ ....|
T Consensus 236 ~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w 313 (431)
T TIGR01788 236 APFVYPDLEWDFRLPRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQY 313 (431)
T ss_pred HHHhCCCchhhcCCCCceEEEECchhccCCCCC--cEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHH
Confidence 2 1111 13678899999999867998 8999887553 223222111111110 00 11123
Q ss_pred HHHhcc--CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC---HHHHHHH
Q psy12791 247 LVTRGL--KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG---AEETRIF 321 (393)
Q Consensus 247 ~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 321 (393)
+.++.+ ..++...++..+.++.+.+.|++.+.++-+. +. ...+++.|.+++. ......+
T Consensus 314 ~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~-~~---------------~~~~iV~Fr~~~~~~~~~~~~~l 377 (431)
T TIGR01788 314 YNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIIS-DG---------------SGIPLVAFKLKDDADPGYTLYDL 377 (431)
T ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEee-CC---------------CCceEEEEEeCCCCCCCcCHHHH
Confidence 332222 3456667777788888888898887765332 11 0147888888531 1234455
Q ss_pred HHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 322 LESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 322 ~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.+.|...++.+..- ..|. .+ ...-++|+++....+.+.++.+.+.|.++
T Consensus 378 ~~~L~~~G~~~~~~------~~p~-----~~---------~~~~~lR~~~~~~~~~~~~~~~~~~~~~~ 426 (431)
T TIGR01788 378 SHRLRERGWIVPAY------TLPK-----NA---------EDIVVMRIVVREGFSRDLAELLIEDIEAA 426 (431)
T ss_pred HHHHHHCCCcccCC------CCCC-----cc---------CCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 55555433322110 0010 00 01357899997666666666666666554
No 250
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.78 E-value=5e-17 Score=166.45 Aligned_cols=161 Identities=17% Similarity=0.191 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHhCCCcEEEeccHHH-----HH-HHHHHhcCC-CC----eEEEcCCCccchHHHHHHhcccCCcEEEeeC
Q psy12791 61 RRNLERCIASLEEAKHGLCYSSGLG-----AV-TAVTHLLSA-GD----HIISGDDVYGGTYRYFAQVAPKIGLEVDFVD 129 (393)
Q Consensus 61 ~~~lr~~la~~~~~~~~i~~~~G~~-----al-~~~~~~~~~-gd----~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~ 129 (393)
..++|+.|++++|.+ .+.++.++. ++ .++.++.++ || +|+++...|+++. ..+...|++++.++
T Consensus 570 ~~~~r~~la~i~g~~-~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~----a~a~~~G~~vv~v~ 644 (993)
T PLN02414 570 FEDLGDLLCEITGFD-SFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNP----ASAAMCGMKIVVVG 644 (993)
T ss_pred HHHHHHHHHHHhCCC-eEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCH----HHHHHCCCEEEEec
Confidence 468999999999994 454444433 44 666677765 88 8999999998743 33455799999999
Q ss_pred CC-----CHHHHHhhcCC---CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccc--cCCCCCcCcEE
Q psy12791 130 LR-----KIENLIKYIKP---NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYY--QKSLPWGVDIV 199 (393)
Q Consensus 130 ~~-----d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~--~~~~~~~~di~ 199 (393)
.+ |+++|++.+++ ++++|++++|+|-+|...|+++|.++|+++ |+++++|.++..... ..+.+.|+|++
T Consensus 645 ~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~-Galv~vDgAq~~a~~~l~~p~~~GaD~~ 723 (993)
T PLN02414 645 TDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDN-GGQVYMDGANMNAQVGLTSPGFIGADVC 723 (993)
T ss_pred cCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHc-CCEEEEEecCHHhccCcCCccccCCCEE
Confidence 85 89999999984 689999999999999999999999999999 999999999976542 24556899999
Q ss_pred EEccccccc-----CCCCceEEEEEecChHHHHHHH
Q psy12791 200 LYSLTKYMN-----GHSDVVMGATVTNDDSLQARLK 230 (393)
Q Consensus 200 ~~S~sK~~~-----G~~G~r~G~~~~~~~~~~~~~~ 230 (393)
++|.||+|+ |.|| +|+++++ +.+...+.
T Consensus 724 ~~s~HK~f~~P~G~GGPg--~G~l~~~-~~L~p~lP 756 (993)
T PLN02414 724 HLNLHKTFCIPHGGGGPG--MGPIGVK-KHLAPFLP 756 (993)
T ss_pred EecCCccCCcCcccCCCC--eeeEEEc-hhhcccCC
Confidence 999999776 4555 8999887 66665543
No 251
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.78 E-value=7e-17 Score=144.05 Aligned_cols=304 Identities=21% Similarity=0.182 Sum_probs=199.0
Q ss_pred ccCCeeeeCCCCCC-CCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchH
Q psy12791 34 ILSTTFKQNTPGQP-PQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTY 111 (393)
Q Consensus 34 ~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~ 111 (393)
++.+...+++.+.. .....|+. ++...++++.+++.++....++++||+++. .++.+.++||+.|++..-.|-.++
T Consensus 11 g~~~~m~eam~~a~~~~~~~YG~--D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~aHi~~~ 88 (342)
T COG2008 11 GPTPEMREALAAANAVGDDVYGE--DPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQPGESVICHETAHIYTD 88 (342)
T ss_pred CCCHHHHHHHHhccccCCCCCCC--CHHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCCCCeEEEeccccceec
Confidence 34455666555542 22344553 688999999999999998899999999997 888888999999999887775321
Q ss_pred HHHHHhc-ccCCcEEEeeCCC----CHHHHHhhcCC------CCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEE
Q psy12791 112 RYFAQVA-PKIGLEVDFVDLR----KIENLIKYIKP------NTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILL 177 (393)
Q Consensus 112 ~~~~~~~-~~~g~~v~~~~~~----d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~l 177 (393)
+..... -..|.++..++-. +++++++.+.+ .+.++++.+.+|..|.++| +++|.++|+++ |+.|
T Consensus 89 -E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~-~l~L 166 (342)
T COG2008 89 -ECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEH-GLPL 166 (342)
T ss_pred -ccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHh-CCce
Confidence 100001 1112344444422 78999997753 2566777666668899999 55677789999 9999
Q ss_pred EEeCccCccc---ccCC---CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHH--HHHHH
Q psy12791 178 VLDNTFLTAY---YQKS---LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFD--CWLVT 249 (393)
Q Consensus 178 ivDea~~~~~---~~~~---~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 249 (393)
++|.+-.... +..+ +..++|++..++||..+ .| +|.++..+.+++++++.++...|...+... +....
T Consensus 167 HmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~-~~---~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~ 242 (342)
T COG2008 167 HMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGG-AP---VGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGL 242 (342)
T ss_pred eechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCc-ce---eeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHH
Confidence 9999876421 1111 22478999999999984 54 777777779999999988887776554322 22223
Q ss_pred hccCCHHHHHHHHHHH--HHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCc
Q psy12791 250 RGLKTLPCRLKEHERG--SIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLI 327 (393)
Q Consensus 250 ~~~~~~~~~~~~~~~~--~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 327 (393)
..+++-..+.....+| +++|.+.++..++++ +..|. ..+++.+.++....+..++...+..
T Consensus 243 ~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~-~~~~~----------------~tN~vf~~l~~~~i~~l~~~~~~~~ 305 (342)
T COG2008 243 YALEDDVWRLAADHANAMAARLAEGLEAKPGVK-LAFPV----------------ETNMVFVRLPESAIEALRLAGALFY 305 (342)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHhhhhcCCce-eccCC----------------cccEEEEECChHHHHHHHhhchhhe
Confidence 3344433344444455 788899998777765 22221 2478888884222222222222211
Q ss_pred cccccccCCccccccCcccccCCCCChhhHhhcCCCC-CeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 328 FRCAESLGGIESLADLPAEMTHKSIPKETRDALGITD-NLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 328 ~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~-~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.++.. ... ..+|+-.++.++++.++.+...++++.
T Consensus 306 ~~~~~-----------------------------~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 306 RGVLI-----------------------------GAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred eeeec-----------------------------cCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 11110 012 379999999999999999999888753
No 252
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.78 E-value=1.1e-16 Score=151.85 Aligned_cols=287 Identities=11% Similarity=0.049 Sum_probs=181.4
Q ss_pred HHHHHHHHhCCC-cEEEeccHHHHH-HHHHHhcCC-------------------------------CCeEEEcCCCccch
Q psy12791 64 LERCIASLEEAK-HGLCYSSGLGAV-TAVTHLLSA-------------------------------GDHIISGDDVYGGT 110 (393)
Q Consensus 64 lr~~la~~~~~~-~~i~~~~G~~al-~~~~~~~~~-------------------------------gd~vl~~~~~y~~~ 110 (393)
+.+...+++|++ ..+-.-||+.|. .+..++++| ||+|+..++.+++.
T Consensus 100 ~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGH 179 (493)
T PRK13580 100 AAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGH 179 (493)
T ss_pred HHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCe
Confidence 344555678888 477789999996 777888876 79999887766542
Q ss_pred HHH-HHHhcccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCcc
Q psy12791 111 YRY-FAQVAPKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTF 183 (393)
Q Consensus 111 ~~~-~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~ 183 (393)
... +..-+.....+++.++++ |.+++++.+.++++.|++++.+|- |...|+++|.++|+++ |+++++|++|
T Consensus 180 lthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~eia~~~-gA~L~VD~AH 257 (493)
T PRK13580 180 LTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAY-PRRVNFAKLREIADEV-GAVLMVDMAH 257 (493)
T ss_pred eecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHHHHHc-CCEEEEECch
Confidence 100 000001111334444332 789999999988999999988888 4588999999999999 9999999999
Q ss_pred CcccccCCC-------CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH-hcCCCCCHHHHHHHHhcc---
Q psy12791 184 LTAYYQKSL-------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN-SMGVVPSPFDCWLVTRGL--- 252 (393)
Q Consensus 184 ~~~~~~~~~-------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--- 252 (393)
+.++..... ..++|++++|+||++.|+ ++|+++++ +++.+.+..... .+++...+..+..+....
T Consensus 258 ~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP---~GG~I~~~-~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~ 333 (493)
T PRK13580 258 FAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGP---RGGLVLAK-KEYADAVDKGCPLVLGGPLPHVMAAKAVALAEAR 333 (493)
T ss_pred hhceeccccchhhcCCCCCCcEEEeCChhhccCC---CeEEEEec-HHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHh
Confidence 987653111 136899999999998655 47999987 788887753332 234444444333222211
Q ss_pred -CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHH-HHHHHhcCcccc
Q psy12791 253 -KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEET-RIFLESLLIFRC 330 (393)
Q Consensus 253 -~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~ 330 (393)
.....++++..+|++.+++.|.+... . +...+ .-..++.+.+ ++.... ..+.+.|...++
T Consensus 334 ~~ef~~y~~~l~~Na~~La~~L~~~G~-~-vv~gg---------------TdshIV~V~l-g~~~~~g~~a~~~L~e~GI 395 (493)
T PRK13580 334 TPEFQKYAQQVVDNARALAEGFLKRGA-R-LVTGG---------------TDNHLVLIDV-TSFGLTGRQAESALLDAGI 395 (493)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhcCC-C-ccCCC---------------CCCCEEEEEe-CCHHHHHHHHHHHHHHCCe
Confidence 12345778888999999998876432 1 10000 1147889998 444322 234445544443
Q ss_pred ccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCC----hHHHHHHHHHHHHHhh
Q psy12791 331 AESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEG----YTDLIADLDQALRKAC 391 (393)
Q Consensus 331 ~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~----~~~~i~~l~~al~~~~ 391 (393)
-+.. ...|..... . .....|||++...+ ++++++.+.++|.++.
T Consensus 396 ~vn~------i~~Ptvp~g-~----------~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l 443 (493)
T PRK13580 396 VTNR------NSIPSDPNG-A----------WYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVL 443 (493)
T ss_pred EEcc------ccCCCCCCC-C----------CCCceEEeccchhhhcCCCHHHHHHHHHHHHHHH
Confidence 3321 111211000 0 11578999998744 4777888888776543
No 253
>PRK02769 histidine decarboxylase; Provisional
Probab=99.78 E-value=1e-16 Score=150.65 Aligned_cols=215 Identities=14% Similarity=0.160 Sum_probs=146.9
Q ss_pred chHHHHHHHHHHHhCCC-cE--EEeccH-HHHH-HHHHHh--cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 59 PTRRNLERCIASLEEAK-HG--LCYSSG-LGAV-TAVTHL--LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~-~~--i~~~~G-~~al-~~~~~~--~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
...+++++.+|+++|.+ +. -++|+| +++. .++... ..++++|++++.+|.+ ..+.++..|++...++.+
T Consensus 65 ~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~S----v~ka~~~lg~~~~~V~~~ 140 (380)
T PRK02769 65 DFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYS----VSKIARLLRIKSRVITSL 140 (380)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceeh----HHHHHHHcCCCCceeccC
Confidence 34457788889999986 33 245555 5554 444322 3578899999999986 345566667766666653
Q ss_pred -----CHHHHHhhcCCC---CcEEEEecCCCCcccccCHHHHHHHHHhCCC---cEEEEeCccCccccc---C--CCC--
Q psy12791 132 -----KIENLIKYIKPN---TKMVWIENPTNPLMTVFDVKAISAVVKQHPD---ILLVLDNTFLTAYYQ---K--SLP-- 193 (393)
Q Consensus 132 -----d~~~l~~~l~~~---~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~---~~livDea~~~~~~~---~--~~~-- 193 (393)
|++++++.+.++ |.+|++++++|+||.+.|+++|.++|+++ | +++++|.+|+.+... . +++
T Consensus 141 ~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~-g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~ 219 (380)
T PRK02769 141 PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKI-GIDDYYIHADAALSGMILPFVNNPPPFSFA 219 (380)
T ss_pred CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHh-CCCceEEEEEecccceeecccCccccCCcc
Confidence 889999988765 89999999999999999999999999999 7 799999999986542 1 222
Q ss_pred CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh-------cCCCC---CHHHHHHHHhcc--CCHHHHHHH
Q psy12791 194 WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS-------MGVVP---SPFDCWLVTRGL--KTLPCRLKE 261 (393)
Q Consensus 194 ~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~~~--~~~~~~~~~ 261 (393)
.++|.+..|.||++++|.| .|.++.+ ++..+.+.....+ ..++. .....+.+++.+ +.+.+..++
T Consensus 220 ~~vDsis~s~HK~~~~P~g--~G~l~~r-~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~ 296 (380)
T PRK02769 220 DGIDSIAISGHKFIGSPMP--CGIVLAK-KKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQH 296 (380)
T ss_pred CCCCEEEECCcccCCCCCC--cEEEEEe-hhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHH
Confidence 3789999999999966888 8999988 4554444211111 11111 122333333333 235556666
Q ss_pred HHHHHHHHHHHHhhCCCcceE
Q psy12791 262 HERGSIEVAKFLESHPCVKGV 282 (393)
Q Consensus 262 ~~~~~~~l~~~l~~~~~~~~v 282 (393)
..+.++++.+.|+.. ++..+
T Consensus 297 ~~~la~~l~~~L~~~-g~~~~ 316 (380)
T PRK02769 297 CLDMAQYAVDRLQAN-GIPAW 316 (380)
T ss_pred HHHHHHHHHHHHHhC-CCEEE
Confidence 777778888888653 44433
No 254
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.78 E-value=7.1e-17 Score=154.50 Aligned_cols=285 Identities=16% Similarity=0.156 Sum_probs=182.2
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh---------cCC-CCeEEEcCCCccch-HHHHHHhcc-----
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL---------LSA-GDHIISGDDVYGGT-YRYFAQVAP----- 119 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~---------~~~-gd~vl~~~~~y~~~-~~~~~~~~~----- 119 (393)
..+...+|++.|+++++.+..++++||++|+ .++... ..+ .+.|+.....|++. ..... ...
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~-~~~~~~~~ 155 (401)
T TIGR01885 77 YNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAIS-MSTDPDSR 155 (401)
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHh-CcCCcccc
Confidence 4567889999999999887899999999996 555432 123 35677777777753 22221 111
Q ss_pred -cCC---cEEEeeCCCCHHHHHhhcC---CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc
Q psy12791 120 -KIG---LEVDFVDLRKIENLIKYIK---PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY 188 (393)
Q Consensus 120 -~~g---~~v~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~ 188 (393)
.++ ..+..++..|++++++.+. +++.+|+++.+++++|.+.| +++|.++|+++ |+++|+||+|..+..
T Consensus 156 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~-~~lli~DEv~~g~g~ 234 (401)
T TIGR01885 156 TNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKH-NVLLIADEIQTGLGR 234 (401)
T ss_pred cccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCc
Confidence 122 2356667778888888774 45778999999999999998 89999999999 999999999864211
Q ss_pred -cCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHH--HHH
Q psy12791 189 -QKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPC--RLK 260 (393)
Q Consensus 189 -~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 260 (393)
... .....|+++ ++|.++ ..++++|+++++ +++++.++...........+..+..+...++.+.. ..+
T Consensus 235 ~G~~~~~~~~~~~~di~~--~gK~l~-~g~~~ig~v~~~-~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~ 310 (401)
T TIGR01885 235 TGKLLCVDHENVKPDIVL--LGKALS-GGVYPVSAVLAD-DDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAE 310 (401)
T ss_pred cchhhHHhhcCCCCCEEE--eecccc-CCCCCcEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 111 123457664 679994 556899999997 78887665311111112345555555555544332 233
Q ss_pred HHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH--HHHHHHHHhcCccccccccCCcc
Q psy12791 261 EHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA--EETRIFLESLLIFRCAESLGGIE 338 (393)
Q Consensus 261 ~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~g~~~ 338 (393)
+..+....+.+.|++++. ..+ ...++.|.+..+.+..+. .....+.+.+...++.+.+.
T Consensus 311 ~~~~~~~~~~~~L~~l~~-~~~---------------~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~--- 371 (401)
T TIGR01885 311 NAEKLGEIFRDQLKKLPK-PII---------------TEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPT--- 371 (401)
T ss_pred HHHHHHHHHHHHHHhccC-Cce---------------eEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEec---
Confidence 444455566666665421 000 011234667777774221 24566666665444433210
Q ss_pred ccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 339 SLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 339 s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.++.+||++++..++++++.+.++|++.
T Consensus 372 ------------------------~~~~lRi~p~l~~t~~~i~~~l~~l~~~ 399 (401)
T TIGR01885 372 ------------------------HGNIIRLAPPLVITEEQLDEGLEIIKKV 399 (401)
T ss_pred ------------------------CCCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 1478999999999999999998888765
No 255
>KOG1368|consensus
Probab=99.77 E-value=1.9e-17 Score=142.27 Aligned_cols=300 Identities=17% Similarity=0.208 Sum_probs=201.5
Q ss_pred eeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHH-HHHHHHhc-CCCCeEEEcCCCccchHHHHHH
Q psy12791 39 FKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGA-VTAVTHLL-SAGDHIISGDDVYGGTYRYFAQ 116 (393)
Q Consensus 39 ~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~a-l~~~~~~~-~~gd~vl~~~~~y~~~~~~~~~ 116 (393)
.++++.++..+-.-|+. +|...+|++..|+++|.+..++++||+.. +.+++..+ ++|.+|++.+.+|--.+ +-..
T Consensus 38 Mr~am~eA~vgDdVyGe--D~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~~~-E~gg 114 (384)
T KOG1368|consen 38 MRRAMAEASVGDDVYGE--DPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHIHRY-EQGG 114 (384)
T ss_pred HHHHHhhcccCcccccC--CccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEEeccchheeeh-hccC
Confidence 44444444333334554 68889999999999999999999999998 46666554 58999999988775322 1223
Q ss_pred hcccCCcEEEeeCCC-----CHHHHHhhcCC--------CCcEEEEecCCCCcc-cccCHH---HHHHHHHhCCCcEEEE
Q psy12791 117 VAPKIGLEVDFVDLR-----KIENLIKYIKP--------NTKMVWIENPTNPLM-TVFDVK---AISAVVKQHPDILLVL 179 (393)
Q Consensus 117 ~~~~~g~~v~~~~~~-----d~~~l~~~l~~--------~~~~v~l~~p~nptG-~~~~~~---~l~~l~~~~~~~~liv 179 (393)
+....|+.+..+... +++++++++.. -|++|.++|-+|.+| .++|++ ++.+||+++ |+.+.+
T Consensus 115 ~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~-glkLH~ 193 (384)
T KOG1368|consen 115 ISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRH-GLKLHM 193 (384)
T ss_pred hhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhcc-CCeeec
Confidence 345567777776543 79999999862 379999998888777 888955 567789999 999999
Q ss_pred eCccCcccc---cCCCC---CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCC--HHHHHHHHhc
Q psy12791 180 DNTFLTAYY---QKSLP---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPS--PFDCWLVTRG 251 (393)
Q Consensus 180 Dea~~~~~~---~~~~~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 251 (393)
|.+-..-.. ..|.. ...|-+.-.+||.++ .| +|-++..+++++++.+..+...|+.+- ..-+++++-+
T Consensus 194 DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglg-AP---VGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLva 269 (384)
T KOG1368|consen 194 DGARIFNAAVASGVPVKKICSAFDSVSICLSKGLG-AP---VGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVA 269 (384)
T ss_pred chhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCC-CC---cccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 998764211 11221 235667677899995 44 777666669999999888877776653 3334444444
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccc
Q psy12791 252 LKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCA 331 (393)
Q Consensus 252 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 331 (393)
++..-...+.-.+.+..++++++..+.+. +..|..+ .+++.+.+....-.++.+.+.++..++.
T Consensus 270 l~~~~~~L~~dHk~A~~lAe~~~~~~~i~-v~v~a~e---------------tNiv~~~l~q~~~~~~~l~~~~~k~gi~ 333 (384)
T KOG1368|consen 270 LDENVPLLRADHKRAKELAEYINTPEEIR-VEVPAVE---------------TNIVNMVLCQARLTAEELCKFLEKNGIL 333 (384)
T ss_pred hhcchHHHHHHHHHHHHHHHHhcccccee-eecchhh---------------cceeeeecccccCCHHHHHHHHHHCCeE
Confidence 44322255555677788899998665543 3434211 3566665533334455555555544333
Q ss_pred cccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 332 ESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 332 ~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
.-.| ....+|+.++..-+++.++.+.+++++
T Consensus 334 lm~~---------------------------~s~r~Rivlh~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 334 LMGG---------------------------ASRRIRIVLHHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred Eeec---------------------------cccceEEEEEEecCHHHHHHHHHHHHH
Confidence 2211 135699999999999999999999853
No 256
>PLN03032 serine decarboxylase; Provisional
Probab=99.77 E-value=4.9e-17 Score=151.68 Aligned_cols=251 Identities=14% Similarity=0.113 Sum_probs=164.6
Q ss_pred eccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cE---EEeccHHHHH-HH
Q psy12791 15 VHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HG---LCYSSGLGAV-TA 89 (393)
Q Consensus 15 ~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~---i~~~~G~~al-~~ 89 (393)
.+.|++.....|.+....+.+ +.......+...+.|++.....-+++++.+|+++|.+ +. +++++|+++. .+
T Consensus 25 ~~~gy~~~~~~~~~~~~~~~~---~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~a 101 (374)
T PLN03032 25 VHFGYPYNLDFDYGELSQLMK---YSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHG 101 (374)
T ss_pred hccCCCchhccChHHHHHHHH---hcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHH
Confidence 466777765555222222221 1111112222234444444455677889999999986 33 5555556665 54
Q ss_pred HHHhc--CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC---CCcEEEEecCCCCcccc
Q psy12791 90 VTHLL--SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP---NTKMVWIENPTNPLMTV 159 (393)
Q Consensus 90 ~~~~~--~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~---~~~~v~l~~p~nptG~~ 159 (393)
+.... .++.+|+++.-+|.+ ..+.++..|.+++.+|.+ |+++|++++.+ ++.+|+++..+|+||.+
T Consensus 102 l~~ar~~~~~~~vi~s~~~H~S----v~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i 177 (374)
T PLN03032 102 ILVGREVFPDGILYASRESHYS----VFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV 177 (374)
T ss_pred HHHHHHhCCCcEEEeCCCceeH----HHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC
Confidence 44322 345689999999986 446677777777777765 89999999876 46788889999999999
Q ss_pred cCHHHHHHHHHhCCC-----cEEEEeCccCcccccC-------CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHH
Q psy12791 160 FDVKAISAVVKQHPD-----ILLVLDNTFLTAYYQK-------SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQA 227 (393)
Q Consensus 160 ~~~~~l~~l~~~~~~-----~~livDea~~~~~~~~-------~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~ 227 (393)
.|+++|.++|+++ | +++++|.+++.+.... ....++|.++.|.||+++.|.| +|.++.+ ....+
T Consensus 178 dpi~eI~~i~~~~-g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g--~G~ll~r-~~~~~ 253 (374)
T PLN03032 178 DDLDRILRILKEL-GYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMP--CGVALTR-KKHVK 253 (374)
T ss_pred CCHHHHHHHHHHh-CCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcC--eEEEEEE-chhhH
Confidence 9999999999998 6 5899999998754321 1123689999999999933887 8999998 44445
Q ss_pred HHHHHHHh--------cCCCC--CHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhhC
Q psy12791 228 RLKFLQNS--------MGVVP--SPFDCWLVTR--GLKTLPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 228 ~~~~~~~~--------~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
.+.....+ .|+-. .....|+.++ +.+.+.++.++..+.++++.+.|++.
T Consensus 254 ~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~ 314 (374)
T PLN03032 254 ALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA 314 (374)
T ss_pred hhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44321111 11111 1233344333 33556777888888999999999864
No 257
>PLN02624 ornithine-delta-aminotransferase
Probab=99.77 E-value=1.3e-16 Score=154.96 Aligned_cols=286 Identities=15% Similarity=0.131 Sum_probs=178.0
Q ss_pred CCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHH--hc---C----CCC-eEEEcCCCccchHHHHHHhcc-----
Q psy12791 56 SNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTH--LL---S----AGD-HIISGDDVYGGTYRYFAQVAP----- 119 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~--~~---~----~gd-~vl~~~~~y~~~~~~~~~~~~----- 119 (393)
+.++...+|.+.|+++.+.+..++.+||++|+ .++.. .. . +++ .|+.....|++.......+..
T Consensus 114 ~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~ 193 (474)
T PLN02624 114 FYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEAT 193 (474)
T ss_pred cCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCcccc
Confidence 45677889999999998877889999999986 55421 11 1 133 567777777664221111100
Q ss_pred -cCC---cEEEeeCCCCHHHHHhhcC---CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc
Q psy12791 120 -KIG---LEVDFVDLRKIENLIKYIK---PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY 188 (393)
Q Consensus 120 -~~g---~~v~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~ 188 (393)
.++ ..+..++..|++.+++.++ +++++|+++.++|++|.++| +++|.++|++| |+++|+||+|..+..
T Consensus 194 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~-gillI~DEv~tG~Gr 272 (474)
T PLN02624 194 RGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKH-NVLMIADEIQTGLAR 272 (474)
T ss_pred ccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCcCc
Confidence 000 1245566678888888775 35789999999999999998 99999999999 999999999984211
Q ss_pred -cCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHH--HHH
Q psy12791 189 -QKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPC--RLK 260 (393)
Q Consensus 189 -~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 260 (393)
... .....|+++ ++|.+ |..++++|+++.+ +++.+.+...........++..+..+...++.+.. ..+
T Consensus 273 tG~~~a~~~~~i~pDiv~--lsK~l-ggG~~pigav~~~-~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~ 348 (474)
T PLN02624 273 TGKMLACDWEEVRPDVVI--LGKAL-GGGVIPVSAVLAD-KDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLAE 348 (474)
T ss_pred CcchhhHHhcCCCCCEEE--ecccc-cCCCCcceeeeec-HHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHHH
Confidence 111 112356665 67999 5666899999987 67766554322211223456666666555544321 222
Q ss_pred HHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC---HHHHHHHHHhcCccccccc
Q psy12791 261 EHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG---AEETRIFLESLLIFRCAES 333 (393)
Q Consensus 261 ~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~ 333 (393)
+..+....+.+.|+. ++.. + ...++.|.++.|.+..+ ......+.+.+...++.+.
T Consensus 349 ~~~~~~~~l~~~L~~l~~~~~~~--i---------------~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~ 411 (474)
T PLN02624 349 RSAKLGQELRDQLQKIQKQFPKL--I---------------KEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAK 411 (474)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCc--e---------------EEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEe
Confidence 333333444444433 2211 0 01123466777777321 3445566666654444332
Q ss_pred cCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 334 LGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 334 ~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
++ .++.|||++++..++++++.+.+.|+++
T Consensus 412 p~---------------------------~~~~lR~~p~l~~t~e~id~~l~~L~~~ 441 (474)
T PLN02624 412 PT---------------------------HDTIIRLAPPLSISEDELQECSKALSDV 441 (474)
T ss_pred cC---------------------------CCCEEEEECCccCCHHHHHHHHHHHHHH
Confidence 11 1478999999899988888888887654
No 258
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.76 E-value=5.3e-17 Score=156.46 Aligned_cols=211 Identities=17% Similarity=0.131 Sum_probs=136.2
Q ss_pred cCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHHH-HHHHH--hcCCCCeEEEcCCCccch
Q psy12791 35 LSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGAV-TAVTH--LLSAGDHIISGDDVYGGT 110 (393)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~ 110 (393)
.++.+.+++.+++.....|. ++.+...+|+++|++++... ..+++++|++|+ .++.. ....+++|+...++|++.
T Consensus 65 ~~p~v~~ai~~q~~~~~~~~-~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~ 143 (423)
T TIGR00713 65 AHPRVVEAVKEALERGTSYG-APTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGH 143 (423)
T ss_pred CCHHHHHHHHHHHHhCCcCC-CCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCC
Confidence 33445555444433333332 35677889999999987654 566677778887 54432 233568999999999874
Q ss_pred HHHHHHh----------------cccCCcEEEeeCCCCHHHHHhhcC---CCCcEEEEe-cCCCCcccccC----HHHHH
Q psy12791 111 YRYFAQV----------------APKIGLEVDFVDLRKIENLIKYIK---PNTKMVWIE-NPTNPLMTVFD----VKAIS 166 (393)
Q Consensus 111 ~~~~~~~----------------~~~~g~~v~~~~~~d~~~l~~~l~---~~~~~v~l~-~p~nptG~~~~----~~~l~ 166 (393)
....... ....+..+..++..|++++++.+. +++++|+++ .++| +|.+.+ +++|.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~ 222 (423)
T TIGR00713 144 HDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLR 222 (423)
T ss_pred hhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHH
Confidence 3222110 001112245556668899988886 567888886 7777 798887 78999
Q ss_pred HHHHhCCCcEEEEeCccCcccccCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH---HhcCC
Q psy12791 167 AVVKQHPDILLVLDNTFLTAYYQKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ---NSMGV 238 (393)
Q Consensus 167 ~l~~~~~~~~livDea~~~~~~~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~---~~~~~ 238 (393)
++|+++ |+++|+||+|..+..... .....|++ +|+|.+ | +|+|+||++++ +++.+.+.... .....
T Consensus 223 ~l~~~~-~~llI~DEv~~g~r~g~~~~~~~~~~~pDi~--t~sK~l-~-~G~pig~v~~~-~~i~~~~~~~~~~~~~~T~ 296 (423)
T TIGR00713 223 ALTEEY-GSLLIFDEVMTGFRVALGGAQEYFGVEPDLT--TLGKII-G-GGLPVGAFGGR-REIMERLAPEGPVYQAGTL 296 (423)
T ss_pred HHHHHh-CCEEEEEccccccccCcchhHHHhCCCcchh--hhhhhh-c-CCCceeeeeEH-HHHHHhhCcCCCeeeccCC
Confidence 999999 999999999976532111 12234654 799999 5 78999999998 88888775211 11122
Q ss_pred CCCHHHHHHHHhccC
Q psy12791 239 VPSPFDCWLVTRGLK 253 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~ 253 (393)
..++..+..+...++
T Consensus 297 ~~~~~~~aaa~a~l~ 311 (423)
T TIGR00713 297 SGNPLAMAAGLATLK 311 (423)
T ss_pred CCCHHHHHHHHHHHH
Confidence 345666665554443
No 259
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.75 E-value=2.2e-16 Score=148.36 Aligned_cols=286 Identities=12% Similarity=0.110 Sum_probs=170.8
Q ss_pred chHHHHHHHHHHHhCCC--cEEEe--ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCH
Q psy12791 59 PTRRNLERCIASLEEAK--HGLCY--SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKI 133 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~--~~i~~--~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~ 133 (393)
...++.|+.++++++.+ ..+++ +||+.++ .++..++.+ +.+++..-.|+..+....+.....+ ++..++.+..
T Consensus 41 ~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~ 118 (361)
T TIGR01366 41 NLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPG 118 (361)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccC-CceEEecCCC
Confidence 45778899999999984 35555 3356678 666666643 4455556667654332322222233 5666654433
Q ss_pred HHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCc
Q psy12791 134 ENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDV 213 (393)
Q Consensus 134 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~ 213 (393)
+.++..+.+++++|.++|..|.||.+.|+++| ++++ |+++++|.+++.+.....++ ..|+++.|.+|++++++|
T Consensus 119 ~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I---~~~~-g~~~iVDavqs~g~~~idv~-~~D~~~~s~~K~lg~~~G- 192 (361)
T TIGR01366 119 SAPEPQADPGVDVIAWAHNETSTGVAVPVRRP---EGSD-DALVVIDATSGAGGLPVDIA-ETDVYYFAPQKNFASDGG- 192 (361)
T ss_pred CCCCCccCCCCCEEEEcccCCccceecccccc---cccC-CCeEEEEcCccccCCCCCHH-HCCEEEEEchhhcCCCCc-
Confidence 33444556789999999999999999999887 5788 99999999999776544433 379999999999965556
Q ss_pred eEEEEEecChHHHHHHHHHHH-------h--------------cCCCCCHHHHHHHHhccC------CHHHHHHHHHHHH
Q psy12791 214 VMGATVTNDDSLQARLKFLQN-------S--------------MGVVPSPFDCWLVTRGLK------TLPCRLKEHERGS 266 (393)
Q Consensus 214 r~G~~~~~~~~~~~~~~~~~~-------~--------------~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 266 (393)
+++++.+ +++++++..... + +...++....+.+.+.++ .++.+.+++.+..
T Consensus 193 -l~~~~~s-~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~ 270 (361)
T TIGR01366 193 -LWLAIMS-PAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSS 270 (361)
T ss_pred -eEEEEEC-HHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 6776776 776666542110 0 011111111111112221 2455567777778
Q ss_pred HHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhcCccccccccCCccccccCcc
Q psy12791 267 IEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESLLIFRCAESLGGIESLADLPA 345 (393)
Q Consensus 267 ~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~ 345 (393)
+.+.+++.+.+.+..+ .+. .... ...-+.++| ..+ +.++....++ ..++.+..+.
T Consensus 271 ~~l~~~l~~~~~~~~~-~~~-~~~~---------s~~v~~v~~-~~g~~~~~v~~~L~---~~gI~i~~~~--------- 326 (361)
T TIGR01366 271 SRLYSWAQERPYATPF-VTD-PGKR---------SQVVGTIDF-VDDIDAATVAKILR---ANGIVDTEPY--------- 326 (361)
T ss_pred HHHHHHHHhCCCcccC-CCC-hhhc---------ccceEEEEC-CCccCHHHHHHHHH---HCCCeeccCc---------
Confidence 8888888877643211 111 0000 001123444 222 3333333333 2233332110
Q ss_pred cccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 346 EMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
.. .....+|+|++.++++++++++.++|+++.+
T Consensus 327 ----~~----------l~~~~vRis~~~~~t~~di~~l~~al~~~~~ 359 (361)
T TIGR01366 327 ----RK----------LGRNQLRVAMFPAIDPDDVEALTECVDWVVE 359 (361)
T ss_pred ----cc----------cCCCcEEEEcCCCCCHHHHHHHHHHHHHHHh
Confidence 00 1146899999999999999999999997653
No 260
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.75 E-value=3.6e-16 Score=134.67 Aligned_cols=297 Identities=17% Similarity=0.187 Sum_probs=176.3
Q ss_pred ccCCC-CchHHHHHHHHHHHh----CC---CcEEEeccHHHH-H-HHHHHhc---CCCC--eEEEc-CCCccchHHHHHH
Q psy12791 53 YSRSN-NPTRRNLERCIASLE----EA---KHGLCYSSGLGA-V-TAVTHLL---SAGD--HIISG-DDVYGGTYRYFAQ 116 (393)
Q Consensus 53 y~~~~-~~~~~~lr~~la~~~----~~---~~~i~~~~G~~a-l-~~~~~~~---~~gd--~vl~~-~~~y~~~~~~~~~ 116 (393)
..+|. ..+...|-+++++++ |. ++.|.+|+|++. . .++..+. ..|+ +|+.| .|.|-+ |..
T Consensus 67 ~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiG----Y~d 142 (417)
T COG3977 67 LCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIG----YAD 142 (417)
T ss_pred HhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcc----ccc
Confidence 34453 356777888888764 43 279999999986 4 4333332 2343 45544 566654 322
Q ss_pred hcccCCc------EEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeC
Q psy12791 117 VAPKIGL------EVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDN 181 (393)
Q Consensus 117 ~~~~~g~------~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDe 181 (393)
+.-.-.. ++..++.. |.+++. +.+++.+|+++-|.||||.++. +.+|.++|++| |+++++|.
T Consensus 143 ~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~-giPliIDn 219 (417)
T COG3977 143 AGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQH-GIPLIIDN 219 (417)
T ss_pred cccCccceeeccCCcccccccceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhc-CCcEEEec
Confidence 2111111 11111111 555543 3467899999999999999997 66777889999 99999999
Q ss_pred ccCcccccC------CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC-
Q psy12791 182 TFLTAYYQK------SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT- 254 (393)
Q Consensus 182 a~~~~~~~~------~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 254 (393)
+|+.++... ++=-.+-+.|.|+||. |+||.|+|.++++ +++++.+..+.......++.+..+++.+.++.
T Consensus 220 AYg~PFP~iifsd~~~~w~~NiilC~SLSK~--GLPG~R~GIiIan-e~viqaitnmn~iisLap~~~G~Aia~~mie~g 296 (417)
T COG3977 220 AYGVPFPGIIFSDATPLWNENIILCMSLSKL--GLPGSRCGIIIAN-EKVIQAITNMNGIISLAPGRMGPAIAAEMIESG 296 (417)
T ss_pred ccCCCCCceecccccccCCCCEEEEeehhhc--CCCCcceeEEEcc-HHHHHHHHhccceeeecCCCccHHHHHHHhhcc
Confidence 999865321 1112466999999997 7999999999998 89998887666544444444444444444432
Q ss_pred -HHH-----HHHHHHHHHHHHHHHHhh-CCCcceE-eCCCCCCCcchHHHhhhcCCCcce-EEEEEcCCHHHHHHHHHhc
Q psy12791 255 -LPC-----RLKEHERGSIEVAKFLES-HPCVKGV-LHPGLPSHPNHELAKSQWSGTSGM-LSFYVNGGAEETRIFLESL 325 (393)
Q Consensus 255 -~~~-----~~~~~~~~~~~l~~~l~~-~~~~~~v-~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 325 (393)
+.+ .+--+.++.+...+.|++ +|...+. ..|. |.+ +|+=+++-+-..+.+.++|
T Consensus 297 dl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpE-----------------GAIFlWLWf~dLPItt~~LYq~L 359 (417)
T COG3977 297 DLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPE-----------------GAIFLWLWFKDLPITTEELYQRL 359 (417)
T ss_pred hHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCC-----------------cceeehhhhccCCCCHHHHHHHH
Confidence 111 122223444444555543 2322211 1121 222 3433323335566778888
Q ss_pred CccccccccCCccccc-cCcccccCCCCChhhHhhcCCCCCeEEEEecCCC--hHHHHHHHHHHHHHhh
Q psy12791 326 LIFRCAESLGGIESLA-DLPAEMTHKSIPKETRDALGITDNLVRLSVGVEG--YTDLIADLDQALRKAC 391 (393)
Q Consensus 326 ~~~~~~~~~g~~~s~~-~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~--~~~~i~~l~~al~~~~ 391 (393)
+..++.+.+|..|-.. ..++ ...+.|+|+|+..+. .+.-+..+.+.++++.
T Consensus 360 Ka~Gvl~VPG~~FFpGl~~ew---------------pH~hqC~Rmn~~~~~~~ie~Gva~lae~ve~~y 413 (417)
T COG3977 360 KARGVLMVPGHYFFPGLDKEW---------------PHTHQCMRMNYVPEPEKIEKGVAILAEEVERAY 413 (417)
T ss_pred HhCeEEEecccccCCCCCCCC---------------CCccceEEEecCCCHHHHHHHHHHHHHHHHHHH
Confidence 8888888888765321 1111 123689999996654 3555566667666654
No 261
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.73 E-value=6.7e-16 Score=146.45 Aligned_cols=209 Identities=14% Similarity=0.111 Sum_probs=147.3
Q ss_pred hHHHHHHHHHHHhCCC---cEEEeccHH-HHH-HHHHHhc--C-CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC-
Q psy12791 60 TRRNLERCIASLEEAK---HGLCYSSGL-GAV-TAVTHLL--S-AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL- 130 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~---~~i~~~~G~-~al-~~~~~~~--~-~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~- 130 (393)
...++++.+++++|.+ .++++++|+ .++ .++.++- . +||.|+++..+|.+ ..+++...|++++.++.
T Consensus 106 l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S----~~kAi~~~G~~pv~Vd~~ 181 (444)
T TIGR03531 106 LTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKS----CIKAISTAGFEPRVIETV 181 (444)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHH----HHHHHHHcCCeEEEeeee
Confidence 3567888899999998 578888887 456 4444432 2 58999999998875 45667889999999984
Q ss_pred -C------CHHHHHhhcCC---CCcEEEEecCC-CCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc------CCCC
Q psy12791 131 -R------KIENLIKYIKP---NTKMVWIENPT-NPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ------KSLP 193 (393)
Q Consensus 131 -~------d~~~l~~~l~~---~~~~v~l~~p~-nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~------~~~~ 193 (393)
+ |++++++++++ ++.++++.+|+ +++|...|+++|.++|+++ |+++|+|++|+..... ....
T Consensus 182 ~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~-gI~lIvDaAyg~~~~~~~~~~~~g~~ 260 (444)
T TIGR03531 182 LDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANY-DIPHIVNNAYGLQSNKYMELINKAIK 260 (444)
T ss_pred ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHc-CCEEEEECcCcCcChhhhhhhhcccc
Confidence 2 79999999976 45666666664 5566788999999999999 9999999999964321 1122
Q ss_pred Cc-CcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHH-HHHHH--hccCCHHHHHHHHHHHHHHH
Q psy12791 194 WG-VDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFD-CWLVT--RGLKTLPCRLKEHERGSIEV 269 (393)
Q Consensus 194 ~~-~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~l 269 (393)
.| .|+++.|+||++. .+|. +|.++++++++.+.++....... ..++.. .++.+ .+.+.+.+.+++..++++.+
T Consensus 261 ~Grad~vv~s~hK~l~-~pg~-Gg~I~~~d~el~~~i~~~y~g~~-~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l 337 (444)
T TIGR03531 261 VGRVDAVVSSTDKNFM-VPVG-GAIIYSFDENFIQEISKSYPGRA-SASPSLDVLITLLSLGSKGYLELLKERKEMYKYL 337 (444)
T ss_pred ccCCCeEEEeCccCCC-CCCC-EEEEEECCHHHHHHHHHhccCCC-CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 33 5999999999995 5553 56666777888887765432211 222222 22222 23355666777777777888
Q ss_pred HHHHhhC
Q psy12791 270 AKFLESH 276 (393)
Q Consensus 270 ~~~l~~~ 276 (393)
.+.|+.+
T Consensus 338 ~~~L~~l 344 (444)
T TIGR03531 338 KELLQKL 344 (444)
T ss_pred HHHHHHH
Confidence 8877754
No 262
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=8.3e-16 Score=139.96 Aligned_cols=307 Identities=16% Similarity=0.130 Sum_probs=190.8
Q ss_pred cCCeeeeCCCCCCCCCccccC-CCCchHHHHHHHHHHHhC-CCcEEEeccHHHHH-HHHH--Hh-cC-C-CCeEEEcCCC
Q psy12791 35 LSTTFKQNTPGQPPQGFEYSR-SNNPTRRNLERCIASLEE-AKHGLCYSSGLGAV-TAVT--HL-LS-A-GDHIISGDDV 106 (393)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~y~~-~~~~~~~~lr~~la~~~~-~~~~i~~~~G~~al-~~~~--~~-~~-~-gd~vl~~~~~ 106 (393)
..|.+.+++.++......-++ |.++...+|.+.|++..+ .+..++.+||++|+ .++- .. .. + ..+|+.....
T Consensus 59 ~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~ns 138 (404)
T COG4992 59 CHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENS 138 (404)
T ss_pred CCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCC
Confidence 344555555444333333332 356888999999999986 66778888999988 4442 12 22 2 3467877777
Q ss_pred ccchH---------HHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC----HHHHHHHHHhCC
Q psy12791 107 YGGTY---------RYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD----VKAISAVVKQHP 173 (393)
Q Consensus 107 y~~~~---------~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~ 173 (393)
|++-. ..|...+.-.=-.++++|.+|+++++++++++|.+|+++..+...|++.+ ++++.++|++|
T Consensus 139 FHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~- 217 (404)
T COG4992 139 FHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEH- 217 (404)
T ss_pred cCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHh-
Confidence 76521 11222222111246778888999999999999999999999999999997 88999999999
Q ss_pred CcEEEEeCccCccc------ccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHH
Q psy12791 174 DILLVLDNTFLTAY------YQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWL 247 (393)
Q Consensus 174 ~~~livDea~~~~~------~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (393)
|+++|.||+|...- .........||++ +.|.++ .|+.+|.++++ +.+.+.+..-.....-..+|+.++.
T Consensus 218 g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~t--laK~Lg--GG~PigA~la~-~~~~~~~~~G~HgSTfGGNpLacAv 292 (404)
T COG4992 218 GALLILDEVQTGLGRTGKLFAYEHYGVEPDILT--LAKALG--GGFPIGAMLAT-EEIASAFTPGDHGSTFGGNPLACAV 292 (404)
T ss_pred CeEEEEeccccCCCccchHHHHHHhCCCCCEEE--eecccc--CCccceeeEEc-hhhhhcCCCCcccCCCCcCHHHHHH
Confidence 99999999998621 1111223467774 779995 35789999997 6655554322222222346777776
Q ss_pred HHhccCCHH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhc
Q psy12791 248 VTRGLKTLP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESL 325 (393)
Q Consensus 248 ~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (393)
+...++.+. ...++..+....+.+.|+++.. .+| ..++.+|.|.|+-+.+.. ......+++.+
T Consensus 293 ~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~----~~~----------~v~~vRG~GLmiGiel~~-~~~a~~~~~~~ 357 (404)
T COG4992 293 ALAVLEVLLEEGLLENVREKGEYLLQRLRELKR----RYP----------LVKEVRGRGLMIGIELKE-PYRARDIVRAL 357 (404)
T ss_pred HHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhh----cCC----------ceeeeecceeEEEEEecC-cccHHHHHHHH
Confidence 665554332 2334444444445555544211 111 123346778889999943 22456666666
Q ss_pred CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 326 LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 326 ~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
...++.+.. ..++.|||.+.+.-++++++...+++++
T Consensus 358 ~~~gvL~~~---------------------------a~~~ViR~~PpL~i~~eei~~~~~~l~~ 394 (404)
T COG4992 358 REEGVLVLP---------------------------AGPNVIRFLPPLVITEEEIDEALDALER 394 (404)
T ss_pred HHCCeEEec---------------------------CCCCeEEecCCccCCHHHHHHHHHHHHH
Confidence 554432211 1256888887777666666555555543
No 263
>PLN00144 acetylornithine transaminase
Probab=99.72 E-value=2.2e-15 Score=142.63 Aligned_cols=281 Identities=15% Similarity=0.144 Sum_probs=169.7
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHH---hcC------C------CCeEEEcCCCccchHHHHHHhccc
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTH---LLS------A------GDHIISGDDVYGGTYRYFAQVAPK 120 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~---~~~------~------gd~vl~~~~~y~~~~~~~~~~~~~ 120 (393)
.++...+|.+.|++..+.+...+.+||++|+ .++.. ... + ..+|+.-..+|++...........
T Consensus 55 ~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~ 134 (382)
T PLN00144 55 HTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSK 134 (382)
T ss_pred cCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCC
Confidence 3566778888888876555678889999986 44432 111 0 246888888887643221111110
Q ss_pred ------CC---cEEEeeCCCCHHHHHhhcCC-CCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcc
Q psy12791 121 ------IG---LEVDFVDLRKIENLIKYIKP-NTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTA 186 (393)
Q Consensus 121 ------~g---~~v~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~ 186 (393)
++ ..+..++..|++.+++.+.. ++++|+++..+||.|...+ +++|.++|++| |+++|+||+|..+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~-g~llI~DEv~tg~ 213 (382)
T PLN00144 135 EQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEA-GALLVFDEVQCGL 213 (382)
T ss_pred ccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEechhhCC
Confidence 00 12466677789999988853 5788999877999555543 88999999999 9999999999864
Q ss_pred ccc-CC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH--HH
Q psy12791 187 YYQ-KS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP--CR 258 (393)
Q Consensus 187 ~~~-~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 258 (393)
... .+ .....| +.|++|.++ +|+|+|+++++ +++.+.+...........++..+..+...++.+. ..
T Consensus 214 gr~g~~~~~~~~~~~PD--i~t~sK~l~--~G~pig~v~~~-~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~ 288 (382)
T PLN00144 214 GRTGYLWAHEAYGVEPD--IMTLAKPLA--GGLPIGAVLVT-EKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGF 288 (382)
T ss_pred CccchHhhhhhcCCCCC--EEEeccccc--CCcceEEEEEc-HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchH
Confidence 221 11 123456 567899994 57999999997 7888776432222233456666666654433221 11
Q ss_pred HHHHHHHHHHH----HHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcccccccc
Q psy12791 259 LKEHERGSIEV----AKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESL 334 (393)
Q Consensus 259 ~~~~~~~~~~l----~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 334 (393)
.+...+..+.+ .+.+..+|.+..+ ++.|.++|+++. . ....+.+.+...++.+..
T Consensus 289 ~~~~~~~g~~l~~~l~~~~~~~~~~~~v------------------rg~G~~~~l~l~-~--~~~~~~~~~~~~Gv~i~~ 347 (382)
T PLN00144 289 LASVAKKGEYLRELLRRKLGGNPHVKEV------------------RGVGLLVGIQLD-V--PAGPLVDACRDSGLLVLT 347 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCceee------------------ecCceEEEEEec-C--ccHHHHHHHHHCCeEEee
Confidence 22222222233 3333333322222 335778999983 1 223455554444443322
Q ss_pred CCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 335 GGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 335 g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+ + ..+.||++++...++++++...+.|.++
T Consensus 348 ~-------------------------~-~~~~lrl~p~~~~~~~~i~~~~~~l~~~ 377 (382)
T PLN00144 348 A-------------------------G-KGDVVRLVPPLVISEAELEQAVEILADC 377 (382)
T ss_pred c-------------------------C-CCCEEEEeCCCccCHHHHHHHHHHHHHH
Confidence 1 0 1478999999966677777776666654
No 264
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.71 E-value=4.8e-15 Score=142.66 Aligned_cols=286 Identities=16% Similarity=0.116 Sum_probs=165.7
Q ss_pred CchHHHHHHHHHHHhCC---CcEEEeccHHHHH-HHHH--HhcCCCCeEEEcCCCccchHHHHHHhcc-----cCC----
Q psy12791 58 NPTRRNLERCIASLEEA---KHGLCYSSGLGAV-TAVT--HLLSAGDHIISGDDVYGGTYRYFAQVAP-----KIG---- 122 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~---~~~i~~~~G~~al-~~~~--~~~~~gd~vl~~~~~y~~~~~~~~~~~~-----~~g---- 122 (393)
++...+|.+.+++..+. +..++++||++|+ .++. .....+..|+..+++|++........-. ..|
T Consensus 83 ~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~ 162 (425)
T PRK08088 83 YEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLM 162 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCC
Confidence 45566778888877654 3678899999975 3332 1222334566669998876533322211 001
Q ss_pred ---cEEEeeCCC--------CHHHHHhhcC-----CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCc
Q psy12791 123 ---LEVDFVDLR--------KIENLIKYIK-----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNT 182 (393)
Q Consensus 123 ---~~v~~~~~~--------d~~~l~~~l~-----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea 182 (393)
.....+|.+ +++++++.+. ++.++|+++..++..|.+.+ +++|.++|+++ ++++|+||+
T Consensus 163 ~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~-~~~lI~Dev 241 (425)
T PRK08088 163 PGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEH-GIMLIADEV 241 (425)
T ss_pred CCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEecc
Confidence 111112221 1455777664 34678888766555566665 99999999999 999999999
Q ss_pred cCcccccC-CC---CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH--
Q psy12791 183 FLTAYYQK-SL---PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP-- 256 (393)
Q Consensus 183 ~~~~~~~~-~~---~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 256 (393)
|..+.... .. ..+.+.-+.||||.+ | +|+|+||++++ +++.+.+...........++..+..+...++...
T Consensus 242 ~~g~g~~g~~~~~~~~~~~pdi~s~sK~l-~-~G~rig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~ 318 (425)
T PRK08088 242 QTGAGRTGTLFAMEQMGVAADLTTFAKSI-A-GGFPLAGVTGR-AEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQE 318 (425)
T ss_pred ccCCCcCcchhHHhhcCCCCCEEEEeccc-c-CCCcceeeEec-HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhc
Confidence 98632211 11 123344468999999 4 78999999997 8888877543333333456666665555543321
Q ss_pred HHHHHHHHHHHHHHHHH----hhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-------CHHHHHHHHHhc
Q psy12791 257 CRLKEHERGSIEVAKFL----ESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-------GAEETRIFLESL 325 (393)
Q Consensus 257 ~~~~~~~~~~~~l~~~l----~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l 325 (393)
...++..+..+++.+.| ..+|.+..+ ++.|.++|+.+.. +......+...+
T Consensus 319 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v------------------~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~ 380 (425)
T PRK08088 319 NLLQKANALGEKLKDGLLAIAEKHPEIGDV------------------RGLGAMIAIELFEDGDHSKPNAKLTAQIVARA 380 (425)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------eccceEEEEEEecCCCCCCCCHHHHHHHHHHH
Confidence 12222222223333333 333332222 2346789999831 233455666655
Q ss_pred CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 326 LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 326 ~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
...++.+..++ ...+.|||+++...++++++...+.|.++
T Consensus 381 ~~~Gv~~~~~~-------------------------~~~~~iRl~~~~~~t~~ei~~~i~~l~~~ 420 (425)
T PRK08088 381 RDKGLILLSCG-------------------------PYYNVLRILVPLTIEDAQIRQGLEIIAQC 420 (425)
T ss_pred HhCCCEEecCC-------------------------CCCCEEEEECCCCcCHHHHHHHHHHHHHH
Confidence 44343322110 11478999999887777777766666654
No 265
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.71 E-value=6.4e-15 Score=140.35 Aligned_cols=289 Identities=17% Similarity=0.125 Sum_probs=172.1
Q ss_pred CCchHHHHHHHHHHHhCC-CcEEEeccHHHHH-HHHHH--hc----C--C-CCeEEEcCCCccchHHHHHHhcc----cC
Q psy12791 57 NNPTRRNLERCIASLEEA-KHGLCYSSGLGAV-TAVTH--LL----S--A-GDHIISGDDVYGGTYRYFAQVAP----KI 121 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~-~~~i~~~~G~~al-~~~~~--~~----~--~-gd~vl~~~~~y~~~~~~~~~~~~----~~ 121 (393)
.++...+|.+.|++.... +...+.+||++|+ .++.. .. . + .++|+.-..+|++.......... ..
T Consensus 80 ~~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~ 159 (408)
T PRK04612 80 YSAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQE 159 (408)
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCccccc
Confidence 355667788888877543 3577778889887 55422 11 1 1 23688888888775322211110 01
Q ss_pred C-----cEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC-----HHHHHHHHHhCCCcEEEEeCccCccccc-C
Q psy12791 122 G-----LEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD-----VKAISAVVKQHPDILLVLDNTFLTAYYQ-K 190 (393)
Q Consensus 122 g-----~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~-----~~~l~~l~~~~~~~~livDea~~~~~~~-~ 190 (393)
+ ..+..++..|++.+++.+.++..+.++..|.+++|.+++ +++|.++|+++ |+++|+||+|..+... .
T Consensus 160 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tg~gr~G~ 238 (408)
T PRK04612 160 GYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQH-DALLVLDEIQCGMGRTGT 238 (408)
T ss_pred CCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCCc
Confidence 1 124556667899999888655555555566666776654 88999999999 9999999999853211 1
Q ss_pred C---CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHH
Q psy12791 191 S---LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERG 265 (393)
Q Consensus 191 ~---~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 265 (393)
. ...+....+.+++|.+ | +|+++|+++++ +++.+.+...........++..+..+...++.+. ...++..+.
T Consensus 239 ~~a~~~~~~~pdi~t~~K~l-~-~G~piga~~~~-~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~ 315 (408)
T PRK04612 239 LFAHWQEQVTPDIVTLAKAL-G-GGFPIGAMLAG-PKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQ 315 (408)
T ss_pred hhhhhhcCCCCCEEEEcchh-c-CCCceEEEEEC-HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 1 1124455667899999 4 68999999987 7777766432222222346777776666665443 233444444
Q ss_pred HHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhcCccccccccCCccccccCc
Q psy12791 266 SIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESLLIFRCAESLGGIESLADLP 344 (393)
Q Consensus 266 ~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~ 344 (393)
.+.+.+.|+++.. .++ ...+.++.|.++.+.+.. ..+....+.+.+...++.+..
T Consensus 316 g~~l~~~l~~l~~----~~~----------~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~---------- 371 (408)
T PRK04612 316 SAALRAGLEALNA----EFG----------VFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQ---------- 371 (408)
T ss_pred HHHHHHHHHHHHh----hCC----------CeeeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEee----------
Confidence 4455555543210 000 011225567888888842 234455666655544433211
Q ss_pred ccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 345 AEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
...+.||+.+.+.-++++++.+.+++++.
T Consensus 372 -----------------~g~~~lRl~Ppl~it~eeid~~l~~l~~~ 400 (408)
T PRK04612 372 -----------------AGPDVLRFVPALNLTDAELADGLARLRLA 400 (408)
T ss_pred -----------------CCCCEEEEcCCccCCHHHHHHHHHHHHHH
Confidence 01378999988887777777666666543
No 266
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.70 E-value=3e-15 Score=133.48 Aligned_cols=251 Identities=25% Similarity=0.330 Sum_probs=152.0
Q ss_pred CCchHHHHHHHHHHHhCCCcEEE---eccHHHHH-HHHHHhcCCCCeEEEcCC-CccchHHHHH-------HhcccCCcE
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLC---YSSGLGAV-TAVTHLLSAGDHIISGDD-VYGGTYRYFA-------QVAPKIGLE 124 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~---~~~G~~al-~~~~~~~~~gd~vl~~~~-~y~~~~~~~~-------~~~~~~g~~ 124 (393)
.+.+++.|++..|+.+|++++++ +.||++|| .++..+++|||+++...- =|.+ ..... ..++.+|++
T Consensus 52 ~D~GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDT-L~~VIG~~g~~~GSL~e~Gi~ 130 (403)
T PF06838_consen 52 DDIGRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDT-LEEVIGIRGNGPGSLKEFGIK 130 (403)
T ss_dssp T-HHHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CC-HHHHHTSSSSSSSSTGGGT-E
T ss_pred CCccHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhh-HHHHhCCCCCCCCChHHhCce
Confidence 46899999999999999998887 78999999 899999999999986542 3432 11111 124567888
Q ss_pred EEeeCCC-----CHHHHHhhcCCCCcEEEEecC----CCCcccccCHHHHHHHHHhC-CCcEEEEeCccCcccc-cCCCC
Q psy12791 125 VDFVDLR-----KIENLIKYIKPNTKMVWIENP----TNPLMTVFDVKAISAVVKQH-PDILLVLDNTFLTAYY-QKSLP 193 (393)
Q Consensus 125 v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p----~nptG~~~~~~~l~~l~~~~-~~~~livDea~~~~~~-~~~~~ 193 (393)
...+++. |.+.+.++++++||+|+|.-. .-|+-.+-.++++.+++++. |+++++||++|++++. ..|.+
T Consensus 131 Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~ 210 (403)
T PF06838_consen 131 YREVPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPTE 210 (403)
T ss_dssp EEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGG
T ss_pred eEEEeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCccc
Confidence 8888874 799999999999999999533 22333333466666666664 8999999999999875 35777
Q ss_pred CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh------cCCCCCHHHHHHHHhccCCHHHHHHHHHHHHH
Q psy12791 194 WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS------MGVVPSPFDCWLVTRGLKTLPCRLKEHERGSI 267 (393)
Q Consensus 194 ~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (393)
.|+|++.+|+-|..+|---.-+||++++ +++++++...... .|.+..... ...+++--.+.......+.+.
T Consensus 211 vGADl~aGSLIKNpGGgiAptGGYIaGr-~~lVe~~a~RLTaPGiG~e~G~t~~~~R--~~~QGlFlAP~vV~eAlKgai 287 (403)
T PF06838_consen 211 VGADLMAGSLIKNPGGGIAPTGGYIAGR-KDLVERAAYRLTAPGIGKEVGATLGTNR--LMFQGLFLAPHVVGEALKGAI 287 (403)
T ss_dssp GT-SEEEEETTSGGGTTT-SS-EEEEES-HHHHHHHHHHHS-TTTGGGSS--TTTHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhheeccceeCCCCCccCcCCEEech-HHHHHHHHhhhcCCccccccccCcchHH--HHHhHHhhchHHHHHHHHHHH
Confidence 8999999999999874333359999998 9999987543321 233222211 122222222333444444445
Q ss_pred HHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcc-eEEEEEcCCHHHHHHHHHhcCc
Q psy12791 268 EVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSG-MLSFYVNGGAEETRIFLESLLI 327 (393)
Q Consensus 268 ~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 327 (393)
..+..++.+.. + ..|.... .... +-.+.+ ++++.+..|++.++.
T Consensus 288 f~A~~fe~lG~-~--v~P~~~~------------~R~DiIQai~l-~~~e~l~~FC~~iQ~ 332 (403)
T PF06838_consen 288 FAAALFEKLGF-E--VSPKPDD------------PRSDIIQAIEL-GSPEKLIAFCQGIQA 332 (403)
T ss_dssp HHHHHHHHTT--E--EES-TTS--------------SSS-EEEE--SSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-c--CCCCCCC------------CCCceEEEEEC-CCHHHHHHHHHHHHh
Confidence 55556655432 1 1232111 1123 458888 799999999998864
No 267
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.70 E-value=1.8e-14 Score=134.97 Aligned_cols=211 Identities=18% Similarity=0.108 Sum_probs=147.3
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---- 131 (393)
++|...+|++++++++|.+..+.++||+.|+ .+....+++||.| +.++|..+. .......|+..+.++.+
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt---~ahIe~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTT---RYHQEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHH---HHHHHhCCeEEEeeecccccc
Confidence 4788999999999999999999999999997 5445568999976 777776543 22235667766666221
Q ss_pred -----------CHHHHHhhcCC----CCcEEEEecCCCCc-ccccC---HHHHHHHHHhCCCcEEEEeCccCcc------
Q psy12791 132 -----------KIENLIKYIKP----NTKMVWIENPTNPL-MTVFD---VKAISAVVKQHPDILLVLDNTFLTA------ 186 (393)
Q Consensus 132 -----------d~~~l~~~l~~----~~~~v~l~~p~npt-G~~~~---~~~l~~l~~~~~~~~livDea~~~~------ 186 (393)
|++++++.+.+ ++++|.+++++|-. |.+++ ++++.++|+++ |+.|+.|.+...+
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~-Gl~vi~DaAR~~gNA~~I~ 222 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAH-GIKVFYDATRCVENAYFIK 222 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHc-CCEEEEEccchhhChhhhh
Confidence 79999999875 34578888888865 78865 78999999999 9999999998762
Q ss_pred -----cccCCC-------CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCC-----CCHHHHHHHH
Q psy12791 187 -----YYQKSL-------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVV-----PSPFDCWLVT 249 (393)
Q Consensus 187 -----~~~~~~-------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 249 (393)
+.+.++ ...+|.++.|..|..+ .+- +|+++.++++++++++.....+++. .+.-+...+.
T Consensus 223 ~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~-~~~--GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala 299 (450)
T TIGR02618 223 EREQGYEDKSIAEILKEMMSYADGCTMSGKKDCL-VNI--GGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMA 299 (450)
T ss_pred cccccccCCCHHHHHHHHhccCcEEEEeeccCCC-CCC--ceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHH
Confidence 111222 1257899999999985 432 7888878899999998776543321 1111111112
Q ss_pred hccC-CHHH-HHHHHHHHHHHHHHHHhhC
Q psy12791 250 RGLK-TLPC-RLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 250 ~~~~-~~~~-~~~~~~~~~~~l~~~l~~~ 276 (393)
.+++ .... ..+....+.++|.+.|.+.
T Consensus 300 ~gL~e~~~~~y~~~r~~~a~~La~~L~~~ 328 (450)
T TIGR02618 300 IGIREAVDYEYIEHRVKQVRYLGDKLKAA 328 (450)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHC
Confidence 2222 2222 2333345678889988865
No 268
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.69 E-value=2.4e-14 Score=128.60 Aligned_cols=290 Identities=13% Similarity=0.140 Sum_probs=155.9
Q ss_pred CccccCC-C-CchHHHHHHHHHHHhCCC-cEEEeccHHH-HH--HHHH-Hhc----C--------CCCeEEEcCCCccch
Q psy12791 50 GFEYSRS-N-NPTRRNLERCIASLEEAK-HGLCYSSGLG-AV--TAVT-HLL----S--------AGDHIISGDDVYGGT 110 (393)
Q Consensus 50 ~~~y~~~-~-~~~~~~lr~~la~~~~~~-~~i~~~~G~~-al--~~~~-~~~----~--------~gd~vl~~~~~y~~~ 110 (393)
+....+| + -.+..++|+..|+++|++ +++++.+.++ .+ .++. +++ . +.-+.++|.|.|.-
T Consensus 58 G~D~RNY~G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDR- 136 (425)
T PF12897_consen 58 GTDCRNYPGGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDR- 136 (425)
T ss_dssp TEBTTSS-S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HH-
T ss_pred CccccCCCCccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchH-
Confidence 3445555 3 367899999999999998 6666655544 43 3332 221 1 12257999999984
Q ss_pred HHHHHHhcccCCcEEEeeCCC----CHHHHHhhcC--CCCcEEEE-ecCCCCcccccCHHHHHHHHHh---CCCcEEEEe
Q psy12791 111 YRYFAQVAPKIGLEVDFVDLR----KIENLIKYIK--PNTKMVWI-ENPTNPLMTVFDVKAISAVVKQ---HPDILLVLD 180 (393)
Q Consensus 111 ~~~~~~~~~~~g~~v~~~~~~----d~~~l~~~l~--~~~~~v~l-~~p~nptG~~~~~~~l~~l~~~---~~~~~livD 180 (393)
.-.+++.+|++.+.||+. |.+.+++.+. +..|.||+ ..-+||||.+++-+.+.+++.- .++..|+.|
T Consensus 137 ---HFai~E~~Giemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WD 213 (425)
T PF12897_consen 137 ---HFAITEHFGIEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWD 213 (425)
T ss_dssp ---HHHHHHHCT-EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE
T ss_pred ---HHHHHHhhCcEEEecCCCCCCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEee
Confidence 446678899999999985 8999999884 34788887 4669999999997777777754 259999999
Q ss_pred CccCcccc--cCC----CC----------CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHH
Q psy12791 181 NTFLTAYY--QKS----LP----------WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFD 244 (393)
Q Consensus 181 ea~~~~~~--~~~----~~----------~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (393)
++|+.-++ ..+ .+ .+..++..|.||.- .||..++++.++ ++-++.++...........-..
T Consensus 214 NAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKIT--f~GaGva~~aaS-~~Nl~~~~~~~~~~tIgpdKvN 290 (425)
T PF12897_consen 214 NAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKIT--FPGAGVAFFAAS-EANLAWIKKHLSVQTIGPDKVN 290 (425)
T ss_dssp -TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS---TTSS-EEEEE--HHHHHHHHHHHHHH-S---HHH
T ss_pred cCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccc--cCCcceeeeecC-HHHHHHHHHHhcCceeCccHHH
Confidence 99997544 111 11 12348899999986 577779999998 6666666555544444444444
Q ss_pred HHHHHhcc---C-CHHHHHHHHHHH----HHH----HHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc
Q psy12791 245 CWLVTRGL---K-TLPCRLKEHERG----SIE----VAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN 312 (393)
Q Consensus 245 ~~~~~~~~---~-~~~~~~~~~~~~----~~~----l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
+..-.+.+ + .+...|+++.+- .+. +.+.|..-.++..+..|. .|.++++.+.
T Consensus 291 QLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~----------------GGYFIsld~~ 354 (425)
T PF12897_consen 291 QLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPK----------------GGYFISLDVL 354 (425)
T ss_dssp HHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---S----------------BSS-EEEEES
T ss_pred HHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCC----------------CceEEEEecC
Confidence 44333333 3 334445555422 222 233333112455566665 2568999986
Q ss_pred C-CHHHHHHHHHhcCcccccccc-CCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHH
Q psy12791 313 G-GAEETRIFLESLLIFRCAESL-GGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADL 383 (393)
Q Consensus 313 ~-~~~~~~~~~~~l~~~~~~~~~-g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l 383 (393)
+ ....+..+.+ ..++.... |..+.....| .+..|||..++...+|+..++
T Consensus 355 ~G~AkrvV~lak---eAGV~LT~AGAtfPyg~DP------------------~D~nIRiAPS~P~leel~~Am 406 (425)
T PF12897_consen 355 DGTAKRVVELAK---EAGVALTPAGATFPYGKDP------------------RDSNIRIAPSYPSLEELETAM 406 (425)
T ss_dssp TT-HHHHHHHHH---HTTEE---TTTTSGGG--T------------------TS-EEEE--SSS-HHHHHHHH
T ss_pred CChHHHHHHHHH---HhCceeCCCCCCCCCCCCC------------------CCCcEEecCCCCCHHHHHHHH
Confidence 3 4444444444 44444433 4333333222 268999999999988765544
No 269
>KOG1360|consensus
Probab=99.69 E-value=4.2e-15 Score=132.76 Aligned_cols=284 Identities=18% Similarity=0.180 Sum_probs=191.0
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh--cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL--LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIEN 135 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~--~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~ 135 (393)
....+|++.||++.+.+.+++++|.--|. .++..+ .-||=+|......|.+ ..+-.+..+++-..+..+|+++
T Consensus 216 ~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHAS----MI~GIrns~v~K~IFrHND~~h 291 (570)
T KOG1360|consen 216 KHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHAS----MIQGIRNSRVPKHIFRHNDLDH 291 (570)
T ss_pred chhhhHHHHHHHHhcCcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHH----HHHHhhhcCCcceeeccCCHHH
Confidence 34578999999999999999999997775 444443 3366555555555554 3444566677777778888888
Q ss_pred HHhhcCC----CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC---------CCCcCcEEEEc
Q psy12791 136 LIKYIKP----NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS---------LPWGVDIVLYS 202 (393)
Q Consensus 136 l~~~l~~----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~---------~~~~~di~~~S 202 (393)
|++.+.. .+|+|.+++.++.+|.++|+++|.+++++| |++-++||+++.+.+... +....||+.++
T Consensus 292 L~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~y-GAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGT 370 (570)
T KOG1360|consen 292 LEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKY-GAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGT 370 (570)
T ss_pred HHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHh-CceeeeehhhhhccccCCCCCccccCCcchhhhhcccc
Confidence 8888753 379999999999999999999999999999 999999999998665321 11246899999
Q ss_pred ccccccCCCCceEEEEEecChHHHHHHHHHHHhc--CCCCCHHHHH---HHHhccCCH--HHHHHHHHHHHHHHHHHHhh
Q psy12791 203 LTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM--GVVPSPFDCW---LVTRGLKTL--PCRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 203 ~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~ 275 (393)
+.|.| |. .+||+.+. ..+++.++.....+ .....|.-.. .+.+.++.- ...++.+..+..++.+.|.+
T Consensus 371 LgKaf-Gc---VGGYIAat-~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~ 445 (570)
T KOG1360|consen 371 LGKAF-GC---VGGYIAAT-RKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLME 445 (570)
T ss_pred hhhhc-cc---ccceehhh-hhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999 44 38999887 88999888665432 2333333211 122222222 33456667777888888865
Q ss_pred CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChh
Q psy12791 276 HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKE 355 (393)
Q Consensus 276 ~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~ 355 (393)
.. +|-++. -..++-+.+ ++...+....+.|-. ... -+...++.|. .
T Consensus 446 ~G------iPVi~~-------------pSHIiPv~v-gda~l~~~~sd~Li~-~h~----iYvQaINyPT-V-------- 491 (570)
T KOG1360|consen 446 LG------IPVIPN-------------PSHIIPVRV-GDAALAKQASDILIS-KHN----IYVQAINYPT-V-------- 491 (570)
T ss_pred cC------CcccCC-------------Ccceeeeec-cCHHHHHHHHHHHHH-hcC----eEEEeccCCc-c--------
Confidence 32 122111 136788888 677766666665421 000 0111112221 0
Q ss_pred hHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 356 TRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 356 ~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
......+||..+..+|.+..+.|.++|..++
T Consensus 492 -----~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw 522 (570)
T KOG1360|consen 492 -----ARGTERLRIAPTPHHTPQMMNILVNALLDVW 522 (570)
T ss_pred -----cccceeeecCCCCCCCHHHHHHHHHHHHHHH
Confidence 0125789999999999998888888887654
No 270
>PLN02271 serine hydroxymethyltransferase
Probab=99.68 E-value=2.7e-14 Score=136.35 Aligned_cols=237 Identities=14% Similarity=0.135 Sum_probs=154.6
Q ss_pred HHHHHHhCCCc-----EEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHH-----HhcccCCcE--EEeeCCC-
Q psy12791 66 RCIASLEEAKH-----GLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFA-----QVAPKIGLE--VDFVDLR- 131 (393)
Q Consensus 66 ~~la~~~~~~~-----~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~-----~~~~~~g~~--v~~~~~~- 131 (393)
+...++++.+. .|-.-||+.|. .++.++++|||+|+..+..|++...... ..+...|.. ++.++.+
T Consensus 201 era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~ 280 (586)
T PLN02271 201 ERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNP 280 (586)
T ss_pred HHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEccccc
Confidence 34445677542 46677999996 7788899999999999988876432110 112334544 4443343
Q ss_pred -----CHHHHHh-hcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-----CCCCCcCcEEE
Q psy12791 132 -----KIENLIK-YIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ-----KSLPWGVDIVL 200 (393)
Q Consensus 132 -----d~~~l~~-~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~-----~~~~~~~di~~ 200 (393)
|.+++++ +...++|+|++....+| ..+|++++.++|+++ |+++++|.+|..+... .|+. .+|+++
T Consensus 281 ~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D~~~i~eIAdev-GA~LmvD~AH~aGLIa~g~~~sP~~-~aDvvt 356 (586)
T PLN02271 281 QTGYIDYDKLEEKALDFRPKILICGGSSYP--REWDYARFRQIADKC-GAVLMCDMAHISGLVAAKECVNPFD-YCDIVT 356 (586)
T ss_pred ccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCCHHHHHHHHHHc-CCEEEEECcccccccccCcCCCCCc-CCcEEE
Confidence 7899998 55678999999888888 678999999999999 9999999999986542 3444 589999
Q ss_pred EcccccccCCCCceEEEEEecCh-------------------HHHHHHHHHHHhcCCCCCHHH---HHHH--Hh--ccCC
Q psy12791 201 YSLTKYMNGHSDVVMGATVTNDD-------------------SLQARLKFLQNSMGVVPSPFD---CWLV--TR--GLKT 254 (393)
Q Consensus 201 ~S~sK~~~G~~G~r~G~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~---~~~~--~~--~~~~ 254 (393)
+|.|||+.||. +|.+++++. ++.+++....-+ +....+.. +.++ ++ ....
T Consensus 357 ~TTHKtLrGPr---GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfP-glqgGphn~~IAalAvalkea~~~e 432 (586)
T PLN02271 357 STTHKSLRGPR---GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFP-SLQGGPHNNHIAALAIALKQVATPE 432 (586)
T ss_pred eCCcccCCCCC---ceEEEecccccccccCCccccccccccHHHHHHhhcccCC-ccccChhHHHHHHHHHHHHHHhChH
Confidence 99999998875 477776531 344555432211 22222221 2111 11 1223
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC---CHHHHHHHHHhcCc
Q psy12791 255 LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG---GAEETRIFLESLLI 327 (393)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~ 327 (393)
+....++..+|++.|++.|.+.. +.-+ .+.. . ..++.+.+.+ +-..+++.++...+
T Consensus 433 fk~Ya~QVv~NAkaLA~~L~~~G-~~vv--~ggT--d------------nHlvLvDl~~~g~~G~~ae~~Le~~~I 491 (586)
T PLN02271 433 YKAYMQQVKKNAQALASALLRRK-CRLV--TGGT--D------------NHLLLWDLTTLGLTGKNYEKVCEMCHI 491 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCC-CeEe--eCCC--C------------cceeeecCcccCCCHHHHHHHHHHcCe
Confidence 45677788899999999997643 2211 1211 1 2455665532 45778888877665
No 271
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.68 E-value=4e-14 Score=135.98 Aligned_cols=286 Identities=14% Similarity=0.103 Sum_probs=168.0
Q ss_pred CCCchHHHHHHHHHHHhCC---CcEEEeccHHHHH-HHHH--HhcCCCCeEEEcCCCccchHHHHHHhcc-----cCCc-
Q psy12791 56 SNNPTRRNLERCIASLEEA---KHGLCYSSGLGAV-TAVT--HLLSAGDHIISGDDVYGGTYRYFAQVAP-----KIGL- 123 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~---~~~i~~~~G~~al-~~~~--~~~~~gd~vl~~~~~y~~~~~~~~~~~~-----~~g~- 123 (393)
++++...++.++|++.... +...+.+||++|+ .++. .......+|+.-..+|++.......+.. ..+.
T Consensus 73 ~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~ 152 (420)
T TIGR00700 73 TPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFG 152 (420)
T ss_pred cCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCC
Confidence 3456677888888887642 3577788999987 4442 2223345688778888775422222111 1111
Q ss_pred ----EEEeeCCC----------------CHHHHHhhc-----CCCCcEEEEecCCCCcccccC----HHHHHHHHHhCCC
Q psy12791 124 ----EVDFVDLR----------------KIENLIKYI-----KPNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPD 174 (393)
Q Consensus 124 ----~v~~~~~~----------------d~~~l~~~l-----~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~ 174 (393)
.+..++.. +++.+++.+ .+++.+|+++..+..+|.+++ +++|.++|++| |
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~-g 231 (420)
T TIGR00700 153 PFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREH-G 231 (420)
T ss_pred CCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-C
Confidence 12223221 144555554 245789999988888998887 89999999999 9
Q ss_pred cEEEEeCccCcccccC------CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHH
Q psy12791 175 ILLVLDNTFLTAYYQK------SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLV 248 (393)
Q Consensus 175 ~~livDea~~~~~~~~------~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (393)
+++|+||+|..+.... ......|++ +++|.+ | +|+|+||++++ +++.+.+...........++..+..+
T Consensus 232 illI~DEV~tg~gr~g~~~a~~~~~~~pDi~--~lsK~l-~-~G~pig~v~~~-~~i~~~~~~~~~~~T~~~~pl~~aaa 306 (420)
T TIGR00700 232 IVFIADEVQTGFARTGAMFACEHEGPEPDLI--TTAKSL-A-DGLPLSGVTGR-AEIMDAPAPGGLGGTYAGNPLACAAA 306 (420)
T ss_pred CEEEEEecccCCcccchhHHHhhcCCCCCEE--Eeeccc-c-CCcceEEEEec-HHHHhhcCCCCcCCCCCcCHHHHHHH
Confidence 9999999998753211 112245655 589999 5 78999999997 78877664322222223456666655
Q ss_pred HhccCCHHH--HHHHHHHHHHHHHHHHh----hCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC------CHH
Q psy12791 249 TRGLKTLPC--RLKEHERGSIEVAKFLE----SHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG------GAE 316 (393)
Q Consensus 249 ~~~~~~~~~--~~~~~~~~~~~l~~~l~----~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 316 (393)
...++.+.. ..++..+..+.+.+.|+ .++.+..+ ++.|.++++.+.+ +.+
T Consensus 307 ~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v------------------rg~G~~~~i~~~~~~~~~~~~~ 368 (420)
T TIGR00700 307 LAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDV------------------RGLGAMIAVELVDPGTTEPDAG 368 (420)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCEEEe------------------eccceEEEEEEecCCCCCccHH
Confidence 444432211 11222222223333333 23332222 3346788887731 233
Q ss_pred HHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 317 ETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
....+.+.+...++.+.+++.+ .+.|||++....++++++...+.|.+.
T Consensus 369 ~~~~l~~~~~~~Gv~i~p~~~f-------------------------~~~lRl~p~l~~~~~~l~~~~~~l~~~ 417 (420)
T TIGR00700 369 LAERIATAAHAAGLLLLTCGMF-------------------------GNIIRFLPPLTIGDELLSEGLDILCAI 417 (420)
T ss_pred HHHHHHHHHHHCCeEEeccCCC-------------------------CCEEEEECCCCcCHHHHHHHHHHHHHH
Confidence 4566666555445544332211 368999998766677677666666654
No 272
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.67 E-value=2.2e-14 Score=137.56 Aligned_cols=286 Identities=15% Similarity=0.091 Sum_probs=171.3
Q ss_pred CCchHHHHHHHHHHHhCC---CcEEEeccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHhc-----ccCC---
Q psy12791 57 NNPTRRNLERCIASLEEA---KHGLCYSSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQVA-----PKIG--- 122 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~---~~~i~~~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~-----~~~g--- 122 (393)
.++...+|.+.|++.... +...+.+||++|+ .++.. ......+|+.-..+|++......... ...+
T Consensus 81 ~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~ 160 (421)
T PRK09792 81 PYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGP 160 (421)
T ss_pred CCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCC
Confidence 456677888888887642 3578889999987 44432 22334578888888877432221110 0111
Q ss_pred --cEEEeeCCC----------CHHHHHhhcC-----CCCcEEEEecCCCCccccc-C---HHHHHHHHHhCCCcEEEEeC
Q psy12791 123 --LEVDFVDLR----------KIENLIKYIK-----PNTKMVWIENPTNPLMTVF-D---VKAISAVVKQHPDILLVLDN 181 (393)
Q Consensus 123 --~~v~~~~~~----------d~~~l~~~l~-----~~~~~v~l~~p~nptG~~~-~---~~~l~~l~~~~~~~~livDe 181 (393)
..+..++.. +++.+++.+. ++.++|+++..++++|..+ | +++|.++|+++ |+++|+||
T Consensus 161 ~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~-g~llI~DE 239 (421)
T PRK09792 161 FPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEH-GIVMIADE 239 (421)
T ss_pred CCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEec
Confidence 113333332 2466777664 3578999998899999876 5 89999999999 99999999
Q ss_pred ccCcccc-cCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCH
Q psy12791 182 TFLTAYY-QKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTL 255 (393)
Q Consensus 182 a~~~~~~-~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (393)
++..+.. ..+ .....|+ .+++|.++ +|+++|+++++ +++.+.+...........++..+..+...++.+
T Consensus 240 v~tg~gr~G~~~a~~~~~~~pDi--~t~gK~l~--~G~pigav~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l 314 (421)
T PRK09792 240 VQSGFARTGKLFAMDHYADKPDL--MTMAKSLA--GGMPLSGVVGN-ANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNII 314 (421)
T ss_pred cccCCCCCCchhHHHhcCCCCcE--EEeehhhc--CCCceEEEEEc-HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHH
Confidence 9986422 111 1123564 57899994 67999999997 788776642222122234566665444444332
Q ss_pred HH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC------HHHHHHHHH
Q psy12791 256 PC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG------AEETRIFLE 323 (393)
Q Consensus 256 ~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 323 (393)
.. ..++..+..+++.+.|+. +|.+ .+.+|.|.++++.+.+. ......+.+
T Consensus 315 ~~~~~~~~~~~~g~~l~~~l~~l~~~~p~v------------------~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~ 376 (421)
T PRK09792 315 DKESLCERANQLGQRLKNTLIDAKESVPAI------------------AAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQ 376 (421)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHhCCCc------------------ceecccceEEEEEecCCccCCcchHHHHHHHH
Confidence 21 222222333333333332 2221 12355678899999532 133455555
Q ss_pred hcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 324 SLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 324 ~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+...++.+... |..++.|||.+.+..++++++.+.+++.++.
T Consensus 377 ~~~~~Gv~i~~~-------------------------g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l 419 (421)
T PRK09792 377 RALAQGLLLLTC-------------------------GAYGNVIRFLYPLTIPDAQFDAAMKILQDAL 419 (421)
T ss_pred HHHHCCcEEeec-------------------------CCCCCEEEEeCCCcCCHHHHHHHHHHHHHHH
Confidence 554434333110 1115789999999888888888888887653
No 273
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=3e-14 Score=136.61 Aligned_cols=287 Identities=14% Similarity=0.112 Sum_probs=172.9
Q ss_pred CCCchHHHHHHHHHHHhCC---CcEEEeccHHHHH-HHHH--HhcCCCCeEEEcCCCccchHHHHHHhccc-----CC--
Q psy12791 56 SNNPTRRNLERCIASLEEA---KHGLCYSSGLGAV-TAVT--HLLSAGDHIISGDDVYGGTYRYFAQVAPK-----IG-- 122 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~---~~~i~~~~G~~al-~~~~--~~~~~gd~vl~~~~~y~~~~~~~~~~~~~-----~g-- 122 (393)
++++...++.+.|++.... +...+.+||++|+ .++. .......+|+.-...|++.......+... .+
T Consensus 80 ~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~ 159 (421)
T PRK06777 80 VPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFG 159 (421)
T ss_pred cCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCC
Confidence 3456677888888887642 3678889999987 4443 22233456888888887754322211110 00
Q ss_pred ---cEEEeeCCC----------CHHHHHhhcC-----CCCcEEEEecCCCCccccc-C---HHHHHHHHHhCCCcEEEEe
Q psy12791 123 ---LEVDFVDLR----------KIENLIKYIK-----PNTKMVWIENPTNPLMTVF-D---VKAISAVVKQHPDILLVLD 180 (393)
Q Consensus 123 ---~~v~~~~~~----------d~~~l~~~l~-----~~~~~v~l~~p~nptG~~~-~---~~~l~~l~~~~~~~~livD 180 (393)
..+..++.. +++.+++.+. +++.+|+++..++..|... | +++|.++|+++ |+++|+|
T Consensus 160 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~-g~llI~D 238 (421)
T PRK06777 160 PFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEH-GILLIAD 238 (421)
T ss_pred CCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEe
Confidence 012222221 2555666653 3478899988888888654 4 89999999999 9999999
Q ss_pred CccCcccc-cCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC
Q psy12791 181 NTFLTAYY-QKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT 254 (393)
Q Consensus 181 ea~~~~~~-~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (393)
|+|..+.. ... .....|++ +++|.+ | +|+|+||++++ +++.+.+...........++..+..+...++.
T Consensus 239 Ev~tg~gr~g~~~~~~~~~~~pDiv--~~sK~l-~-~G~pigav~~~-~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~ 313 (421)
T PRK06777 239 EVQTGFARTGKLFAMEYYDVKPDLI--TMAKSL-G-GGMPISAVVGR-AEVMDAPAPGGLGGTYAGNPLAVAAALAVLDV 313 (421)
T ss_pred chhhCCccCCchhhhhhcCCCCCEE--eeehhh-c-CCCceEEEEEc-HHHHhccCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99986421 111 11235665 689999 5 78999999997 78877664322222223466666666666543
Q ss_pred HH--HHHHHHHHHHHHHHHHHhhC----CCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC------CHHHHHHHH
Q psy12791 255 LP--CRLKEHERGSIEVAKFLESH----PCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG------GAEETRIFL 322 (393)
Q Consensus 255 ~~--~~~~~~~~~~~~l~~~l~~~----~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 322 (393)
++ ...++..+..+.+.+.|+++ +.+.. .++.|.++.+.+.. +.+....+.
T Consensus 314 ~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrg~G~~~~i~~~~~~~~~~~~~~~~~l~ 375 (421)
T PRK06777 314 IAEEKLCQRALILGAHLVEVLEKAKASCPAIVD------------------IRARGSMVAVEFNDPQTGKPSPEFTRQYQ 375 (421)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEE------------------ecCceEEEEEEEecCccCCccHHHHHHHH
Confidence 32 23444455555565655542 22211 24456777766632 123345555
Q ss_pred HhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 323 ESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 323 ~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.+...++.+.+++. ..+.+||++.+.-++++++...+.|++..
T Consensus 376 ~~~~~~Gv~i~~~~~-------------------------~g~~lr~~ppl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 376 RQALEEGLLLLSCGV-------------------------HGNVIRFLYPLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred HHHHhCCeEEeecCC-------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 544434444433221 13689999988888888887777776553
No 274
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=4.4e-14 Score=135.94 Aligned_cols=282 Identities=16% Similarity=0.147 Sum_probs=167.3
Q ss_pred CchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHhcc-------cCC--c
Q psy12791 58 NPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQVAP-------KIG--L 123 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~~-------~~g--~ 123 (393)
++...+|.+.|++..... ...+.+||++|+ .++.. ......+|+.-...|++.......... .++ .
T Consensus 83 ~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 162 (443)
T PRK08360 83 PVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELS 162 (443)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCC
Confidence 456678888888887543 466678888887 44432 223345677777777664311111100 001 1
Q ss_pred EEEeeCCC-----------------CHHHHHhhcC-----CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEE
Q psy12791 124 EVDFVDLR-----------------KIENLIKYIK-----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILL 177 (393)
Q Consensus 124 ~v~~~~~~-----------------d~~~l~~~l~-----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~l 177 (393)
.+.+++.. +++.+++.+. +++++|+++..+||+|.+++ +++|.++|+++ |+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~-g~ll 241 (443)
T PRK08360 163 DVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEH-GILL 241 (443)
T ss_pred CcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCEE
Confidence 12333221 1233444442 46889999888899999887 88999999999 9999
Q ss_pred EEeCccCcccc-cCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Q psy12791 178 VLDNTFLTAYY-QKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRG 251 (393)
Q Consensus 178 ivDea~~~~~~-~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (393)
|+||+|..+.. ... .....|++ +++|.+ | +|+|+|+++++ +++.+.+...........++..+..+...
T Consensus 242 I~DEv~~g~gr~G~~~a~~~~~~~pDii--tlsK~l-~-~G~pigav~~~-~~i~~~~~~~~~~~T~~~~p~~~aaa~a~ 316 (443)
T PRK08360 242 VVDEVQSGLGRTGKWFAIEHFGVEPDII--TLGKPL-G-GGLPISATIGR-AEIMDSLPPLAHAFTLSGNPVASAAALAV 316 (443)
T ss_pred EEeccccCCCcCccchhhhhcCCCCCEE--Eecccc-c-CCceeEEEEEc-HHHHhhhcCCCCCCCCCcCHHHHHHHHHH
Confidence 99999986421 111 12235665 679999 5 78999999997 78888775332222333456666555555
Q ss_pred cCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-------HHHH
Q psy12791 252 LKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-------AEET 318 (393)
Q Consensus 252 ~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 318 (393)
++.+.. ..++..+....+.+.|++ ++.+. +.++.|.++.+.+..+ ...+
T Consensus 317 l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~------------------~vrg~Gl~~gie~~~~~~~~~~~~~~~ 378 (443)
T PRK08360 317 IEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIG------------------DVRGIGLMIGVDLVKDRETKERAYEEA 378 (443)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCee------------------eeeccceEEEEEEecCCcccCccHHHH
Confidence 544321 233444444444444442 22221 2245577888877421 1234
Q ss_pred HHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 319 RIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 319 ~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..+...+...++-+.. ...+.+|+++.+..++++++.+.+++++.
T Consensus 379 ~~~~~~l~~~Gi~~~~---------------------------~~~~~lr~~P~l~~t~~~id~~~~~l~~~ 423 (443)
T PRK08360 379 AKVVWRAWELGLIVTF---------------------------FSGNVLRIQPPLTIEKEVLDEGLDILEEA 423 (443)
T ss_pred HHHHHHHHHCCeEEee---------------------------cCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 4555554433322210 01467999999998888888887777654
No 275
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.66 E-value=3.9e-14 Score=136.26 Aligned_cols=288 Identities=14% Similarity=0.084 Sum_probs=175.3
Q ss_pred CCCchHHHHHHHHHHHhC--CCcEEEeccHHHHH-HHHHHh--c------CCCCeEEEcCCCccchHHHHHHhccc----
Q psy12791 56 SNNPTRRNLERCIASLEE--AKHGLCYSSGLGAV-TAVTHL--L------SAGDHIISGDDVYGGTYRYFAQVAPK---- 120 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~--~~~~i~~~~G~~al-~~~~~~--~------~~gd~vl~~~~~y~~~~~~~~~~~~~---- 120 (393)
++++...+|.++|++... .+...+.+||++|+ .++... . ....+|+.....|++...........
T Consensus 82 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~ 161 (423)
T PRK05964 82 FTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMH 161 (423)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCcccc
Confidence 456667788999988874 34577788999987 444321 1 12357888888887754322221111
Q ss_pred -------CCcEEEeeCCCC-----HHHHHhhcC---CCCcEEEEec-CCCCcccccC----HHHHHHHHHhCCCcEEEEe
Q psy12791 121 -------IGLEVDFVDLRK-----IENLIKYIK---PNTKMVWIEN-PTNPLMTVFD----VKAISAVVKQHPDILLVLD 180 (393)
Q Consensus 121 -------~g~~v~~~~~~d-----~~~l~~~l~---~~~~~v~l~~-p~nptG~~~~----~~~l~~l~~~~~~~~livD 180 (393)
.+...+.++..| ++++++.+. +++.+|+++. .++..|...+ +++|.++|++| |+++|+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~-g~llI~D 240 (423)
T PRK05964 162 ALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRH-GVLLIFD 240 (423)
T ss_pred ccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEe
Confidence 122233333334 777777774 3567888877 5888888875 89999999999 9999999
Q ss_pred CccCccc-ccCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH---HH-hcCC--CCCHHHHHHH
Q psy12791 181 NTFLTAY-YQKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL---QN-SMGV--VPSPFDCWLV 248 (393)
Q Consensus 181 ea~~~~~-~~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~---~~-~~~~--~~~~~~~~~~ 248 (393)
|++..+. .... .....|++ +++|+++ ..++++|+++++ +++.+.+... .. ..+. ..++..+..+
T Consensus 241 Ev~tg~gr~G~~~a~~~~~v~pDi~--~~~K~l~-gG~~p~~av~~~-~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa 316 (423)
T PRK05964 241 EIATGFGRTGTLFACEQAGVSPDIM--CLSKGLT-GGYLPLAATLCT-AEIFEAFYSDDRAKAFMHSPSYTANPLACAAA 316 (423)
T ss_pred chhhCCCcCcchhHHHhcCCCCCee--eeehhhh-cCcccceEEEEc-HHHHHhhhcCCcccccccCCCCCcCHHHHHHH
Confidence 9997531 1111 12245665 5789994 444779998887 8888876421 00 1111 2456666555
Q ss_pred HhccCCHH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH--HHHHHHHHh
Q psy12791 249 TRGLKTLP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA--EETRIFLES 324 (393)
Q Consensus 249 ~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 324 (393)
...++.+. ...++..+..+.+.+.|+++.. +|.+ .+.++.|.++.+.+.++. +....+.+.
T Consensus 317 ~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~-----~~~i----------~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~ 381 (423)
T PRK05964 317 NASLDLFEDEPVLERVAALSAGLAEGLEPFRD-----LPGV----------ADVRVLGAIGAVELDRPVLERDGPALRAF 381 (423)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcc-----CCCe----------EEeecccEEEEEEeccCcchhHHHHHHHH
Confidence 55554332 2345555555666666654321 1110 112345677888885322 135556665
Q ss_pred cCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 325 LLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 325 l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+...++-+.. ..+.+|+++++..++++++.+.++|+++.
T Consensus 382 l~~~Gv~v~~----------------------------~~~~lR~~p~l~~t~edId~~v~~l~~al 420 (423)
T PRK05964 382 ALERGVLLRP----------------------------LGNTIYLMPPYIITAEELDRITDAIVEVA 420 (423)
T ss_pred HHHCCeEEEe----------------------------cCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 5443332211 02579999999999999999999987653
No 276
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.66 E-value=2.4e-14 Score=136.12 Aligned_cols=285 Identities=16% Similarity=0.078 Sum_probs=167.3
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhc------CCC-CeEEEcCCCccchHHHHHHhcccCCc------
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLL------SAG-DHIISGDDVYGGTYRYFAQVAPKIGL------ 123 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~------~~g-d~vl~~~~~y~~~~~~~~~~~~~~g~------ 123 (393)
++...+|.+.|++..+.+..++++||++|+ .++.... ++| ++|+..+..|++............+.
T Consensus 77 ~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~ 156 (395)
T PRK03715 77 NEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAP 156 (395)
T ss_pred CHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCC
Confidence 344445555555544445788889999986 4443321 123 56888888777643222111111100
Q ss_pred ---EEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccc-cc-----C
Q psy12791 124 ---EVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAY-YQ-----K 190 (393)
Q Consensus 124 ---~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~-~~-----~ 190 (393)
.+...+..|++++++.+.+++++|+++..++..|...| +++|.++|+++ |+++|+||++..+- .. .
T Consensus 157 ~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~-~~llI~DEv~tG~GRtG~~~a~~ 235 (395)
T PRK03715 157 QVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQH-GLLLIVDEVQTGCGRTGTLFAYE 235 (395)
T ss_pred CCCCceeeCCchHHHHHHHcCCCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCCCcchhhHh
Confidence 12233446889999999878899999999999998887 99999999999 99999999998520 01 1
Q ss_pred CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHH
Q psy12791 191 SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIE 268 (393)
Q Consensus 191 ~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 268 (393)
......|++ +++|.++| |+.+|.++++ +++...... .........|..+..+...++.++ ...++..+....
T Consensus 236 ~~gv~PDi~--t~gK~lg~--G~p~~av~~~-~~i~~~~~~-~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~ 309 (395)
T PRK03715 236 LSGIEPDIM--TLGKGIGG--GVPLAALLAK-AEVAVFEAG-DQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEY 309 (395)
T ss_pred hcCCCCcee--eehhhhhC--CcceEEEEEc-cccccccCC-CcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 122346765 67899953 5678998887 565421111 000111235666666666555443 234555555556
Q ss_pred HHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-HHHHHHHHHhcCccccccccCCccccccCcccc
Q psy12791 269 VAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-AEETRIFLESLLIFRCAESLGGIESLADLPAEM 347 (393)
Q Consensus 269 l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~ 347 (393)
+.+.|+++.. .++ + .+.++.|.++.+.+..+ ..........+...++-+..
T Consensus 310 l~~~L~~l~~----~~~-i----------~~vrG~Glm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~------------- 361 (395)
T PRK03715 310 LKEKLLELSE----ERG-L----------EGERGEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNA------------- 361 (395)
T ss_pred HHHHHHHHhh----cCC-c----------CeEEcceeEEEEEecCchHHHHHHHHHhccCCCEEEee-------------
Confidence 6665653210 000 0 11245578889998421 12222222322111211100
Q ss_pred cCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 348 THKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 348 ~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+..||+++....++++++.+.++|++..
T Consensus 362 --------------~~~~~lR~~p~l~~t~~ei~~~~~~l~~~l 391 (395)
T PRK03715 362 --------------PRPNLLRFMPALNVTTEEIDQMIAMLRSVL 391 (395)
T ss_pred --------------cCCCEEEEeCCcccCHHHHHHHHHHHHHHH
Confidence 013679999999999999999888887653
No 277
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.65 E-value=4.2e-15 Score=138.79 Aligned_cols=209 Identities=18% Similarity=0.188 Sum_probs=141.7
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
|+....+.++.+|+.+|++...++++|++. + .++++++++||+|++++.+|-+.+ +.+...|+++++++..
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~----~alil~ga~Pvyi~p~~~~ 139 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVY----NALILSGAIPVYIPPEDNE 139 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHH----HHHHHHTEEEEEEEEEE-T
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHH----HHHHHcCCeEEEecCCccc
Confidence 456678899999999999999999999886 7 888899999999999999998743 3567789999988663
Q ss_pred -------CH-----HHHHhhcCC--CCc---EEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC----
Q psy12791 132 -------KI-----ENLIKYIKP--NTK---MVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK---- 190 (393)
Q Consensus 132 -------d~-----~~l~~~l~~--~~~---~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~---- 190 (393)
++ +.+++++++ +.+ +|++++|+.- |.+.++++|.++|+++ +.+|+||||++......
T Consensus 140 ~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~-Gv~~di~~I~~~~h~~-~~~llvDEAhGah~~F~~lp~ 217 (417)
T PF01276_consen 140 YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYY-GVCYDIKEIAEICHKH-GIPLLVDEAHGAHFGFHPLPR 217 (417)
T ss_dssp TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TT-SEEE-HHHHHHHHCCT-ECEEEEE-TT-TTGGCSGGGT
T ss_pred cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCC-eEEECHHHHHHHhccc-CCEEEEEccccccccCCCCcc
Confidence 34 788887753 344 4999999854 9999999999999999 99999999999743222
Q ss_pred -CCCCcCc-------EEEEcccccccCCCCceEEEEEecChH--HHHHHHHHHHhcCCCCCHHHHH-----HHHhccC--
Q psy12791 191 -SLPWGVD-------IVLYSLTKYMNGHSDVVMGATVTNDDS--LQARLKFLQNSMGVVPSPFDCW-----LVTRGLK-- 253 (393)
Q Consensus 191 -~~~~~~d-------i~~~S~sK~~~G~~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-- 253 (393)
....++| +++.|.||.++++.. ..++-.++.. -.++++.......++ ||.... .+.+.++
T Consensus 218 ~a~~~gad~~~~~~~~vvqS~HKtL~altQ--ts~lh~~~~~~v~~~~~~~~l~~~~TT-SPSY~lmASlD~a~~~m~~~ 294 (417)
T PF01276_consen 218 SALALGADRPNDPGIIVVQSTHKTLPALTQ--TSMLHVKGDRIVDHERVNEALSMHQTT-SPSYPLMASLDVARAQMEEE 294 (417)
T ss_dssp TCSSTTSS-CTSBEEEEEEEHHHHSSS-TT---EEEEEETCCCTTHHHHHHHHHHHS-S-S--HHHHHHHHHHHHHHSHH
T ss_pred chhhccCccccccceeeeechhhccccccc--ceEEEecCCCcccHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHhhh
Confidence 2336788 999999999977665 7777776443 234555433333222 222111 1111111
Q ss_pred CHHHHHHHHHHHHHHHHHHHh
Q psy12791 254 TLPCRLKEHERGSIEVAKFLE 274 (393)
Q Consensus 254 ~~~~~~~~~~~~~~~l~~~l~ 274 (393)
.-...+++..+.+..+++.++
T Consensus 295 ~G~~l~~~~i~~a~~~R~~i~ 315 (417)
T PF01276_consen 295 EGRELLEEAIELAEEFRKKIN 315 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHH
Confidence 112345555666677777773
No 278
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=5.8e-14 Score=135.48 Aligned_cols=292 Identities=17% Similarity=0.124 Sum_probs=168.5
Q ss_pred CCCchHHHHHHHHHHHhC-CCcEE-EeccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHhcc-----c--CC-
Q psy12791 56 SNNPTRRNLERCIASLEE-AKHGL-CYSSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQVAP-----K--IG- 122 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~-~~~~i-~~~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~~-----~--~g- 122 (393)
+.++...+|.++|+++.. ..+.+ +.+||++|. .++.. ......+|+..+..|++.......+.. . .+
T Consensus 83 ~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~ 162 (433)
T PRK08117 83 IYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQP 162 (433)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCC
Confidence 346778899999999873 23444 458999986 44432 123345677777777764322111100 0 00
Q ss_pred --cEEEeeCCC-----------------CHHHHHhhcC-----CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCC
Q psy12791 123 --LEVDFVDLR-----------------KIENLIKYIK-----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPD 174 (393)
Q Consensus 123 --~~v~~~~~~-----------------d~~~l~~~l~-----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~ 174 (393)
..+..+|.. +++++++.+. +++.+|+++......|.+.+ +++|.++|++| |
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~-g 241 (433)
T PRK08117 163 LLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRH-G 241 (433)
T ss_pred CCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHc-C
Confidence 112222221 3445555442 35788999988888899988 99999999999 9
Q ss_pred cEEEEeCccCcccc-cCCC---CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHh
Q psy12791 175 ILLVLDNTFLTAYY-QKSL---PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTR 250 (393)
Q Consensus 175 ~~livDea~~~~~~-~~~~---~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (393)
+++|+||+|..+.. .... .++...-+.+++|.+ | .|+++|+++++ +++.+.+...........++..+..+..
T Consensus 242 ~llI~DEv~tG~gr~G~~~~~~~~gv~pDi~t~sK~l-g-~G~pigav~~~-~~i~~~~~~~~~~~T~~~np~~~aaa~a 318 (433)
T PRK08117 242 ILLIFDEVQTGFGRTGEWFAAQTFGVVPDIMTIAKGI-A-SGLPLSAVVAS-KELMEQWPLGSHGTTFGGNPVACAAALA 318 (433)
T ss_pred CEEEEecchhccCccccchhHhhcCCCCCEeehhhhc-c-CCCcceeEEEc-HHHHhhccCCCCCCCCCcCHHHHHHHHH
Confidence 99999999996311 1111 122222235899999 5 68999999997 7777766422221122345666666655
Q ss_pred ccCCHH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-----CHHHHHHHHH
Q psy12791 251 GLKTLP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-----GAEETRIFLE 323 (393)
Q Consensus 251 ~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 323 (393)
.++.+. ..+++..+..+.+.+.|+.+.. .++. ..+.++.|.++.+.+.. +......+.+
T Consensus 319 ~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~----------~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~ 384 (433)
T PRK08117 319 TLEVIKEEKLLDNANEMGAYALERLEVLKE----KHPV----------IGDVRGIGLMIGIEIVDPDGEPDGDAVEKILD 384 (433)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHh----cCCc----------eeeeecCCcEEEEEEecCCCCcchHHHHHHHH
Confidence 554432 1233344444444444443210 0110 01234556777888742 1233455555
Q ss_pred hcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 324 SLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 324 ~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.+...++.+... |...+.+|+++....++++++.+.++|.++
T Consensus 385 ~l~~~Gv~~~~~-------------------------g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~ 426 (433)
T PRK08117 385 KCLEKGLLFYLC-------------------------GNAGNVLRMIPPLTVTKEEIDEGLDILDEA 426 (433)
T ss_pred HHHHCCCEEeec-------------------------CCCCCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 554333322110 111478999998888888887777777654
No 279
>KOG1359|consensus
Probab=99.65 E-value=5.6e-15 Score=127.00 Aligned_cols=282 Identities=17% Similarity=0.193 Sum_probs=183.8
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENL 136 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l 136 (393)
......|+.+||++.+.+|+|+..++-.|. .++-+++.|.|.|+.....|.+..+-. .++++++ .+ |+.++
T Consensus 111 q~iHk~LE~kiAqfh~rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGi-rLckry~----h~---dv~~l 182 (417)
T KOG1359|consen 111 QDIHKLLESKIAQFHGREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGI-RLCKRYR----HV---DVFDL 182 (417)
T ss_pred hHHHHHHHHHHHHHhCCCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhh-HHHhhhc----cc---hhHHH
Confidence 356678999999999999999999999995 677778889998888877776543322 3344322 22 33334
Q ss_pred Hhh----cCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC---------CCCcCcEEEEcc
Q psy12791 137 IKY----IKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS---------LPWGVDIVLYSL 203 (393)
Q Consensus 137 ~~~----l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~---------~~~~~di~~~S~ 203 (393)
+.. .+-+-++|+....-+..|.+.|+++|.+++++| |+++++||+++.+++... ..-..|++..++
T Consensus 183 ~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei~~La~kY-gaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTL 261 (417)
T KOG1359|consen 183 EHCLISACKMRLKLVVTDGVFSMDGDIAPLEEISQLAKKY-GALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTL 261 (417)
T ss_pred HHHHHHhhhheEEEEEecceeccCCCcccHHHHHHHHHhc-CcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhh
Confidence 433 333567888888889999999999999999999 999999999998765321 112478999999
Q ss_pred cccccCCCCceEEEEEecChHHHHHHHHHHHh--cCCCCCHHHHHHHHhccCCH---HHHHHHHHHHHHHHHHHHhhCCC
Q psy12791 204 TKYMNGHSDVVMGATVTNDDSLQARLKFLQNS--MGVVPSPFDCWLVTRGLKTL---PCRLKEHERGSIEVAKFLESHPC 278 (393)
Q Consensus 204 sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~ 278 (393)
+|.++|. .+||..++ +.+++.++..... +.+...|.....+.+.++.+ .....+...+.+++.++++.- +
T Consensus 262 gKAlGga---~GGyttgp-~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a-G 336 (417)
T KOG1359|consen 262 GKALGGA---SGGYTTGP-KPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA-G 336 (417)
T ss_pred hhhhcCC---CCCCccCC-hhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc-C
Confidence 9999543 38999997 8888888654432 33333333322222222211 123334445566666666521 1
Q ss_pred cceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHh
Q psy12791 279 VKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRD 358 (393)
Q Consensus 279 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~ 358 (393)
+.+.+ . .-++..+-+ |+.+.+.++.+.+-..++-+-.. ..|. . |
T Consensus 337 ---ftIsg-~--------------~hPI~pv~l-Gda~lA~~~ad~lLk~Gi~Vigf------s~Pv-V-----P----- 380 (417)
T KOG1359|consen 337 ---FTISG-A--------------SHPICPVML-GDARLASKMADELLKRGIYVIGF------SYPV-V-----P----- 380 (417)
T ss_pred ---ceecC-C--------------CCCccceec-ccHHHHHHHHHHHHhcCceEEee------cCCc-C-----C-----
Confidence 11111 0 014566666 77777777777664333221100 0111 0 0
Q ss_pred hcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 359 ALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 359 ~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
.....||+.++..+++++|+++.+|+.++.+
T Consensus 381 ---~gkariRVqiSAaHt~edid~~i~Af~~vgr 411 (417)
T KOG1359|consen 381 ---KGKARIRVQISAAHTEEDIDRLIEAFSEVGR 411 (417)
T ss_pred ---CCceEEEEEEehhcCHHHHHHHHHHHHHHHH
Confidence 1246799999999999999999999987653
No 280
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.64 E-value=1.9e-13 Score=132.14 Aligned_cols=210 Identities=17% Similarity=0.124 Sum_probs=130.1
Q ss_pred CchHHHHHH----HHHHHhCCC-cEEEe----ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHH--HHHHhcccCCcE-
Q psy12791 58 NPTRRNLER----CIASLEEAK-HGLCY----SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYR--YFAQVAPKIGLE- 124 (393)
Q Consensus 58 ~~~~~~lr~----~la~~~~~~-~~i~~----~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~--~~~~~~~~~g~~- 124 (393)
.....++++ ...+.++.. ..+.+ .||+.|. .++.+++++||+|+..+...++... ......+..+..
T Consensus 75 ~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~ 154 (475)
T PLN03226 75 NEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSI 154 (475)
T ss_pred ChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceE
Confidence 345556655 344455655 45544 8999996 7888999999999985532222110 011111111222
Q ss_pred ---EEeeCCC------CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-----
Q psy12791 125 ---VDFVDLR------KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ----- 189 (393)
Q Consensus 125 ---v~~~~~~------d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~----- 189 (393)
+..+..+ |++++++.+.. ++++|++. .++ +|...|+++|.++|+++ |+++++|++|..+...
T Consensus 155 ~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~-~S~-~s~~~D~a~i~~ia~~~-ga~LlvD~AH~~Gli~~~~~~ 231 (475)
T PLN03226 155 YFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG-ASA-YPRDWDYARMRKIADKV-GALLMCDMAHISGLVAAQEAA 231 (475)
T ss_pred EEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe-cCc-CCCccCHHHHHHHHHHc-CCEEEEEchhhhCcccCCCCC
Confidence 2233334 89999998863 67776653 333 68899999999999999 9999999999986643
Q ss_pred CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHH--------------HHHHHHHH-hcCCCCCHHHHHHHHhccC-
Q psy12791 190 KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQ--------------ARLKFLQN-SMGVVPSPFDCWLVTRGLK- 253 (393)
Q Consensus 190 ~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~--------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 253 (393)
.++. ++|++++|+||++.|+. +|+++++ +.+. +.+..... .+.+.+.+...+.+..+++
T Consensus 232 ~p~~-~~Div~~t~hK~L~GP~---Gg~I~~~-~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~ 306 (475)
T PLN03226 232 SPFE-YCDVVTTTTHKSLRGPR---GGMIFFR-KGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQ 306 (475)
T ss_pred CCCC-CCeEEEecCcccccCCC---ceEEEEc-hhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHH
Confidence 2232 68999999999997665 5888876 4332 12221111 1222233333322222222
Q ss_pred ----CHHHHHHHHHHHHHHHHHHHhh
Q psy12791 254 ----TLPCRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 254 ----~~~~~~~~~~~~~~~l~~~l~~ 275 (393)
......++..++++.+.+.|.+
T Consensus 307 i~~~~~~~~~~~~~~na~~L~~~L~~ 332 (475)
T PLN03226 307 AMTPEFKAYQKQVKANAAALANRLMS 332 (475)
T ss_pred HhCcCHHHHHHHHHHHHHHHHHHHHh
Confidence 2444677788889999998876
No 281
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.64 E-value=1.1e-13 Score=130.05 Aligned_cols=210 Identities=17% Similarity=0.062 Sum_probs=145.0
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC------
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD------ 129 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~------ 129 (393)
.+|...+|++.+++++|.+..+.++||+.|+ .+....+++||.| +..+|..+.. ......|+..+.+.
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~---ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTR---YHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhH---HHHHhCCcEEEeeecccccc
Confidence 4688999999999999999999999999997 5444568899964 5555554322 22355566555442
Q ss_pred ------CC---CHHHHHhhcCCC----CcEEEEecCCCCc-cccc---CHHHHHHHHHhCCCcEEEEeCccCcc------
Q psy12791 130 ------LR---KIENLIKYIKPN----TKMVWIENPTNPL-MTVF---DVKAISAVVKQHPDILLVLDNTFLTA------ 186 (393)
Q Consensus 130 ------~~---d~~~l~~~l~~~----~~~v~l~~p~npt-G~~~---~~~~l~~l~~~~~~~~livDea~~~~------ 186 (393)
.+ |++++++.+.++ +++|.+++++|.. |... +++++.++|+++ |+.||+|.+...+
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~-Gl~Vi~DaAra~gna~fI~ 229 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKH-GIKVFFDATRCVENAYFIK 229 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHc-CCEEEEECcchhcChhhhc
Confidence 11 889999998753 4578888888888 5666 479999999999 9999999999864
Q ss_pred -----cccCCC-------CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc-C----CCCCHHH-HHHH
Q psy12791 187 -----YYQKSL-------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM-G----VVPSPFD-CWLV 248 (393)
Q Consensus 187 -----~~~~~~-------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~-~~~~ 248 (393)
+...++ -...|.++.|++|.+. .+- +|+++++++++.++++.....+ | ...+.-+ ..++
T Consensus 230 ~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~-~~~--GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alA 306 (460)
T PRK13237 230 EREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCL-VNI--GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMA 306 (460)
T ss_pred ccccccCCCcHhHHhhhccCcCcEEEEeCCCCCC-CCC--ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHH
Confidence 111222 1247999999999984 332 7999999999999998775432 1 1222212 2222
Q ss_pred HhccCCHH-HHHHHHHHHHHHHHHHHhh
Q psy12791 249 TRGLKTLP-CRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 249 ~~~~~~~~-~~~~~~~~~~~~l~~~l~~ 275 (393)
....+... ...+....+.++|.+.|.+
T Consensus 307 vgl~E~~~~~y~~~ri~~~~~l~~~L~~ 334 (460)
T PRK13237 307 IGIEESVQYEYIEHRVGQVRYLGEKLLA 334 (460)
T ss_pred hHHHhhchHHHHHHHHHHHHHHHHHHHH
Confidence 22222222 3444555677888888865
No 282
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.63 E-value=3.4e-14 Score=146.44 Aligned_cols=157 Identities=18% Similarity=0.202 Sum_probs=118.4
Q ss_pred HHHHHHHHHHhCCC-cEEEeccH-HHHH-HHHHHh-cCC--CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHH
Q psy12791 62 RNLERCIASLEEAK-HGLCYSSG-LGAV-TAVTHL-LSA--GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIEN 135 (393)
Q Consensus 62 ~~lr~~la~~~~~~-~~i~~~~G-~~al-~~~~~~-~~~--gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~ 135 (393)
.++++.+|++.|.+ .++.+..+ +.+. .+++++ .++ +|+|++++..|+++...+...++..|++++.++.++ +
T Consensus 124 ~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~--d 201 (954)
T PRK05367 124 LNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK--A 201 (954)
T ss_pred HHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc--C
Confidence 46788899999988 44444444 4445 334343 344 489999999999988777888889999999998753 1
Q ss_pred HHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCc-ccccCCCCCcCcEEEEccccc-----ccC
Q psy12791 136 LIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLT-AYYQKSLPWGVDIVLYSLTKY-----MNG 209 (393)
Q Consensus 136 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~-~~~~~~~~~~~di~~~S~sK~-----~~G 209 (393)
+. .+++..+++.+| |.+|.+.|+++|.++||++ |+++++|..+.. .....|-++|+|++++|.+|| ++
T Consensus 202 ~~---~~~~~~vlvq~p-~~~G~i~d~~~i~~~ah~~-Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~G- 275 (954)
T PRK05367 202 LD---HDDVFGVLLQYP-GTSGEVRDYTALIAAAHAR-GALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFG- 275 (954)
T ss_pred CC---cccEEEEEEecC-CCCeeeccHHHHHHHHHHc-CCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCC-
Confidence 11 235666666676 5889999999999999999 999999986633 334456668999999999999 64
Q ss_pred CCCceEEEEEecChHHHHHH
Q psy12791 210 HSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 210 ~~G~r~G~~~~~~~~~~~~~ 229 (393)
-|| .|+++++ +++.+.+
T Consensus 276 GP~--aGflavr-~~~~r~l 292 (954)
T PRK05367 276 GPH--AAYFAVR-DAYKRSM 292 (954)
T ss_pred CCC--EEEEEEC-HHHHhhC
Confidence 456 9999998 6666665
No 283
>PLN02880 tyrosine decarboxylase
Probab=99.63 E-value=9.5e-14 Score=134.87 Aligned_cols=286 Identities=13% Similarity=0.132 Sum_probs=176.1
Q ss_pred chHHHHH----HHHHHHhCCCc---------EEEeccHHHH-HHHHHHh----cC------CCC-eEEEcCCCccchHHH
Q psy12791 59 PTRRNLE----RCIASLEEAKH---------GLCYSSGLGA-VTAVTHL----LS------AGD-HIISGDDVYGGTYRY 113 (393)
Q Consensus 59 ~~~~~lr----~~la~~~~~~~---------~i~~~~G~~a-l~~~~~~----~~------~gd-~vl~~~~~y~~~~~~ 113 (393)
|...+++ +.+++++|.++ .+++++|+.+ +.++... ++ ... .|++++.+|.+
T Consensus 118 p~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~S---- 193 (490)
T PLN02880 118 PAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSA---- 193 (490)
T ss_pred cccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHH----
Confidence 4444444 44666777663 4566666777 4443221 11 012 35567777774
Q ss_pred HHHhcccCCcE---EEeeCCC-------CHHHHHhhcCCC------CcEEEEecCCCCcccccCHHHHHHHHHhCCCcEE
Q psy12791 114 FAQVAPKIGLE---VDFVDLR-------KIENLIKYIKPN------TKMVWIENPTNPLMTVFDVKAISAVVKQHPDILL 177 (393)
Q Consensus 114 ~~~~~~~~g~~---v~~~~~~-------d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~l 177 (393)
+.+++...|+. ++.+|.+ |+++|++.+.++ +-+|+.+..+..||.+-|+++|.++|+++ |+|+
T Consensus 194 v~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~-~iwl 272 (490)
T PLN02880 194 LQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSN-GMWF 272 (490)
T ss_pred HHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHc-CCEE
Confidence 77888888874 5666553 788888887532 45666688899999999999999999999 9999
Q ss_pred EEeCccCcccccCC-----CC--CcCcEEEEcccccccCCCCceEEEEEecChHH-HHHHHHHHHhcC------------
Q psy12791 178 VLDNTFLTAYYQKS-----LP--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSL-QARLKFLQNSMG------------ 237 (393)
Q Consensus 178 ivDea~~~~~~~~~-----~~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~-~~~~~~~~~~~~------------ 237 (393)
+||.+|+.+....+ +. ..+|.++.++|||+..+.| .|+++.+++.. .+.+.....+..
T Consensus 273 HVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~--~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~ 350 (490)
T PLN02880 273 HVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFD--CSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDY 350 (490)
T ss_pred EEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCcc--EEEEEEeCHHHHHHHHccCHHHhcCccccccCCCCh
Confidence 99999998654321 11 2579999999999976666 88888875432 232321111100
Q ss_pred --------CCCCHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceE
Q psy12791 238 --------VVPSPFDCWLVTR--GLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGML 307 (393)
Q Consensus 238 --------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 307 (393)
.-...+..|+.++ +.+.+..+.++..+.++++.+.+++.+.++.+.-|. .+++
T Consensus 351 ~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~-----------------~~iv 413 (490)
T PLN02880 351 KDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRI-----------------FSLV 413 (490)
T ss_pred hccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCc-----------------eEEE
Confidence 0001222333322 334566677777788888899998877765433222 3677
Q ss_pred EEEEcC---C----HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCCh-HHH
Q psy12791 308 SFYVNG---G----AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGY-TDL 379 (393)
Q Consensus 308 ~~~~~~---~----~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~-~~~ 379 (393)
.|++++ + .+.+.++.+++...+...-. .+.. ....++|++++..+| +++
T Consensus 414 ~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~---~t~~--------------------~g~~~lR~~~~n~~tt~~d 470 (490)
T PLN02880 414 CFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFIS---HTVL--------------------SGKYVLRFAVGAPLTEERH 470 (490)
T ss_pred EEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEE---EEEE--------------------CCEEEEEEEecCCCCCHHH
Confidence 787753 1 12234455554321111100 0000 014689999987754 588
Q ss_pred HHHHHHHHHHhh
Q psy12791 380 IADLDQALRKAC 391 (393)
Q Consensus 380 i~~l~~al~~~~ 391 (393)
++.+.+.+.++.
T Consensus 471 i~~~~~~i~~~~ 482 (490)
T PLN02880 471 VTAAWKVLQDEA 482 (490)
T ss_pred HHHHHHHHHHHH
Confidence 888888887654
No 284
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.63 E-value=1.5e-13 Score=133.79 Aligned_cols=179 Identities=13% Similarity=0.105 Sum_probs=125.6
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCc---EEEeeCCC-----CHHHHHhhcC----CCCcEEEEe--cCCCCcccccCHH
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGL---EVDFVDLR-----KIENLIKYIK----PNTKMVWIE--NPTNPLMTVFDVK 163 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~---~v~~~~~~-----d~~~l~~~l~----~~~~~v~l~--~p~nptG~~~~~~ 163 (393)
..|++++.+|.+ +.++++..|+ +++.+|.+ |+++|++.+. .+++.++++ ..++.||.+.|++
T Consensus 210 ~~v~~S~~~H~S----~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~ 285 (522)
T TIGR03799 210 LAILVSERGHYS----LGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLD 285 (522)
T ss_pred eEEEECCCchHH----HHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHH
Confidence 468888888886 5566777777 78888775 7888888875 355655554 6677999999999
Q ss_pred HHHHHHHhCCCcEEEEeCccCcccccCC-----CC--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc
Q psy12791 164 AISAVVKQHPDILLVLDNTFLTAYYQKS-----LP--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM 236 (393)
Q Consensus 164 ~l~~l~~~~~~~~livDea~~~~~~~~~-----~~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~ 236 (393)
+|.++|+++ |+++++|.+|+.+....+ +. .++|.++.|.|||+.|+.| +|.++.+++.+.+.+.....+.
T Consensus 286 eIa~i~~~~-g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g--~G~llvr~~~~~~~~~~~~~Yl 362 (522)
T TIGR03799 286 EMADIAQEL-GCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMG--AGMVLFKDPALMSAIEHHAEYI 362 (522)
T ss_pred HHHHHHHHc-CCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcc--cEEEEEeCHHHHHHhccCcchh
Confidence 999999999 999999999997543222 12 2689999999998878888 8999887676655543211110
Q ss_pred --------------CCCC-CHHHHHHHHhcc--CCHHHHHHHHHHHHHHHHHHHhhCCCcceEe
Q psy12791 237 --------------GVVP-SPFDCWLVTRGL--KTLPCRLKEHERGSIEVAKFLESHPCVKGVL 283 (393)
Q Consensus 237 --------------~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~ 283 (393)
++-. ..+..++.++.+ +.++...++..+.++.+.+.|++.|.++.+.
T Consensus 363 ~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~ 426 (522)
T TIGR03799 363 LRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVT 426 (522)
T ss_pred cCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEec
Confidence 1101 111223333333 3456667777788888899998888876444
No 285
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.63 E-value=1.5e-13 Score=131.47 Aligned_cols=285 Identities=15% Similarity=0.113 Sum_probs=167.4
Q ss_pred CchHHHHHHHHHHHhC----CCc-EEEe-ccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHhc------ccCC
Q psy12791 58 NPTRRNLERCIASLEE----AKH-GLCY-SSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQVA------PKIG 122 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~----~~~-~i~~-~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~------~~~g 122 (393)
++...+|.++|++... ..+ ..++ +||++|+ .++.. ......+|+.-...|++......... ...+
T Consensus 77 ~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~ 156 (412)
T TIGR02407 77 TEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAG 156 (412)
T ss_pred cHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCC
Confidence 4566778888887642 222 3444 6999987 44432 22334678888888877543222211 1111
Q ss_pred ---cEEEeeCCC--------CHHHHHhhcC------CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeC
Q psy12791 123 ---LEVDFVDLR--------KIENLIKYIK------PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDN 181 (393)
Q Consensus 123 ---~~v~~~~~~--------d~~~l~~~l~------~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDe 181 (393)
..+..+|.. +++.+++.+. +++.+|+++..+++.|.+.+ +++|.++|+++ |+++|+||
T Consensus 157 ~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~DE 235 (412)
T TIGR02407 157 VPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRH-DILLIVDD 235 (412)
T ss_pred CCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEec
Confidence 133445542 3666777764 34688999999999998654 89999999999 99999999
Q ss_pred ccCcc------cccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC-
Q psy12791 182 TFLTA------YYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT- 254 (393)
Q Consensus 182 a~~~~------~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 254 (393)
++..+ +.........|++ +++|++ |..|+++|+++++ +++ +.+...........++..+..+...++.
T Consensus 236 V~tG~GRtG~~~a~~~~~v~PDi~--~~~K~l-g~~G~pigav~~~-~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~ 310 (412)
T TIGR02407 236 IQAGCGRTGTFFSFEPAGIEPDIV--CLSKSI-SGYGLPLALTLIK-PEL-DVWKPGEHNGTFRGNNLAFVTATAALEYY 310 (412)
T ss_pred hhhCCCccchhHHhcccCCCCCEE--Eechhc-cCCccceeEEEEc-hhh-hccCCCccCCCCCccHHHHHHHHHHHHHH
Confidence 99742 1111223456776 477999 4448999999997 554 4332111111222345544433333321
Q ss_pred HH--HHHHHHHHHHHHHHHHHh----hCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc
Q psy12791 255 LP--CRLKEHERGSIEVAKFLE----SHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF 328 (393)
Q Consensus 255 ~~--~~~~~~~~~~~~l~~~l~----~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (393)
+. ...++..+..+.+.+.|+ .++... . +.++.|.++++.++ +.+....+.+.+...
T Consensus 311 i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~-~----------------~vrg~Gl~~~l~l~-~~~~~~~~~~~~~~~ 372 (412)
T TIGR02407 311 WSDDAFEKAVQRKSEIIQERLDRIVAEYPELI-K----------------QVRGRGLMQGIECG-DGDLAGKIAKAAFEN 372 (412)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHhhCCCce-E----------------eeecceeEEEEEec-ChHHHHHHHHHHHHC
Confidence 11 122333333334444333 222110 1 12445778899994 455566676666544
Q ss_pred ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 329 RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 329 ~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
++.+... +...+.||+++....++++++.+.+++++..
T Consensus 373 Gv~v~~~-------------------------~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l 410 (412)
T TIGR02407 373 GLIIETS-------------------------GPNDEVIKLLPPLTIDEETLQQGLDILEQAV 410 (412)
T ss_pred CCEEecc-------------------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 4433211 1114689999999999999999988887653
No 286
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.63 E-value=1.9e-13 Score=130.98 Aligned_cols=289 Identities=15% Similarity=0.110 Sum_probs=177.4
Q ss_pred CCchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHH--Hhc---CCCCeEEEcCCCccchHHHHHHhcc------c--
Q psy12791 57 NNPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVT--HLL---SAGDHIISGDDVYGGTYRYFAQVAP------K-- 120 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~--~~~---~~gd~vl~~~~~y~~~~~~~~~~~~------~-- 120 (393)
.++...++.++|++..... ...+.+||++|. .++. ... ....+|+.....|++.......... .
T Consensus 115 ~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 194 (442)
T TIGR03372 115 LDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFM 194 (442)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCC
Confidence 4677788899998876543 366778899987 4442 122 1235788888888775322211100 0
Q ss_pred -CCcEEEeeCCCCHHHHHhhcC------CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcc-cc
Q psy12791 121 -IGLEVDFVDLRKIENLIKYIK------PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTA-YY 188 (393)
Q Consensus 121 -~g~~v~~~~~~d~~~l~~~l~------~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~-~~ 188 (393)
....+..+|.+|.+.+++.++ +++.+|+++......|...| ++++.++|+++ |+++|+||++..+ -.
T Consensus 195 p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~-g~llI~DEV~tG~GRt 273 (442)
T TIGR03372 195 PLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEF-GALLILDEVQTGMGRT 273 (442)
T ss_pred CCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeecccCCCcc
Confidence 112346667778877766663 35788999988888898888 99999999999 9999999999642 11
Q ss_pred c-----CCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHHHHhcCC--CCCHHHHHHHHhccCCHHH--H
Q psy12791 189 Q-----KSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFLQNSMGV--VPSPFDCWLVTRGLKTLPC--R 258 (393)
Q Consensus 189 ~-----~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~ 258 (393)
. .......|+++ ++|.++ .| +.+|.++++ +++.+.+.......+. ..+|..++.+.+.++.+++ .
T Consensus 274 G~~~a~e~~gv~PDivt--~gK~lg--~G~~Pigavv~~-~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l 348 (442)
T TIGR03372 274 GKMFACEHEGVQPDILC--LAKALG--GGVMPIGATIAT-EAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNL 348 (442)
T ss_pred ccchhhhhcCCCCCeee--ehhhhc--CCcccceEEEec-HHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 1 11223468775 889995 35 358888887 7887766321111122 2357777666666654432 1
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCcc
Q psy12791 259 LKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIE 338 (393)
Q Consensus 259 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~ 338 (393)
.++..+.-+++.+.|+++.. .+|. .+.+.++.|.++.+.+. +.+....+.+.+...++-+...
T Consensus 349 ~~~~~~~G~~l~~~L~~l~~----~~~~---------~i~~vRG~Gl~~giel~-~~~~~~~i~~~l~~~Gvl~~~~--- 411 (442)
T TIGR03372 349 PAQAAIKGDFLLDGFQQLAA----EYPD---------LIIEARGKGLLMAIEFR-DNEIGYAFAKELFQQNILVAGT--- 411 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHH----hCCC---------ceEEEecceEEEEEEeC-ChHHHHHHHHHHHHCCcEEeec---
Confidence 33333334444444443210 0110 01122456788999994 4445566666665444333210
Q ss_pred ccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 339 SLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 339 s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+.....+||++....++++++.+.++|++.
T Consensus 412 ----------------------~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 412 ----------------------LNNAKSIRIEPPLTITIEQCALVIKAAKDA 441 (442)
T ss_pred ----------------------CCCCCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 011468999999999999999999888764
No 287
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.62 E-value=6e-14 Score=144.06 Aligned_cols=161 Identities=18% Similarity=0.181 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHh-cCCC--CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHH
Q psy12791 61 RRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHL-LSAG--DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIE 134 (393)
Q Consensus 61 ~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~-~~~g--d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~ 134 (393)
..++++.+|+++|.+ +++.+..++++ . .++++. +++| |+|++++..|+++...+...++..|++++.++.++.+
T Consensus 150 l~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~ 229 (993)
T PLN02414 150 LLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD 229 (993)
T ss_pred HHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc
Confidence 356788899999998 55666555554 5 344343 4444 7899999999998888888888999999999875422
Q ss_pred HHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccc--cCCCCCcCcEEEEccccccc--CC
Q psy12791 135 NLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYY--QKSLPWGVDIVLYSLTKYMN--GH 210 (393)
Q Consensus 135 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~--~~~~~~~~di~~~S~sK~~~--G~ 210 (393)
...+.+..+++.+|+ .+|.+.|+++|.++||++ |+++++ .++..... ..+-.+|+|+++++.+||.. |.
T Consensus 230 ----~~~~~v~~vlvq~P~-~~G~v~dv~~I~~~ah~~-GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~ 302 (993)
T PLN02414 230 ----YSSGDVCGVLVQYPA-TDGEVLDYAEFVKNAHAN-GVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGY 302 (993)
T ss_pred ----cccCceEEEEEecCC-CCeEEcCHHHHHHHHHHc-CCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCC
Confidence 122334445544554 689999999999999999 999999 55543222 13445799999999999972 22
Q ss_pred CCceEEEEEecChHHHHHH
Q psy12791 211 SDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 211 ~G~r~G~~~~~~~~~~~~~ 229 (393)
.|-+.|+++++ +++...+
T Consensus 303 GGP~aGflavr-~~~~r~~ 320 (993)
T PLN02414 303 GGPHAAFLATS-QEYKRLM 320 (993)
T ss_pred CCCCeeEEEEC-HHHHhhC
Confidence 22348999998 6665543
No 288
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.62 E-value=5.7e-14 Score=135.46 Aligned_cols=309 Identities=16% Similarity=0.107 Sum_probs=181.2
Q ss_pred CeeeeCCCCCCCCCccccC-CCCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHH--hcC--CC-CeEEEcCCCc
Q psy12791 37 TTFKQNTPGQPPQGFEYSR-SNNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTH--LLS--AG-DHIISGDDVY 107 (393)
Q Consensus 37 ~~~~~~~~~~~~~~~~y~~-~~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~--~~~--~g-d~vl~~~~~y 107 (393)
+.+.+++.+++.....+++ +.++...+|.++|++.... +...+.+||++|+ .++.. ... .| .+|+.....|
T Consensus 101 p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~y 180 (459)
T PRK11522 101 PVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAF 180 (459)
T ss_pred HHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCC
Confidence 3444444443332222222 3467778888989887643 2467778899987 44431 121 22 3688888888
Q ss_pred cchHHHHHHhccc---------CCcEEEeeCCCCHHHHHhhcC------CCCcEEEEecCCCCcccccC----HHHHHHH
Q psy12791 108 GGTYRYFAQVAPK---------IGLEVDFVDLRKIENLIKYIK------PNTKMVWIENPTNPLMTVFD----VKAISAV 168 (393)
Q Consensus 108 ~~~~~~~~~~~~~---------~g~~v~~~~~~d~~~l~~~l~------~~~~~v~l~~p~nptG~~~~----~~~l~~l 168 (393)
++........... ....+..+|..|.+++++.+. +++.+|+++..+...|.+.| ++++.++
T Consensus 181 HG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~l 260 (459)
T PRK11522 181 HGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKL 260 (459)
T ss_pred CCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHH
Confidence 7743221111100 011244566668888777764 34678999999888899887 9999999
Q ss_pred HHhCCCcEEEEeCccCcc-cc-----cCCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHHHHhcCC--C
Q psy12791 169 VKQHPDILLVLDNTFLTA-YY-----QKSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFLQNSMGV--V 239 (393)
Q Consensus 169 ~~~~~~~~livDea~~~~-~~-----~~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~--~ 239 (393)
|+++ |+++|+||++..+ -. ........|++ +++|.++ .| +.+|.++++ +++.+.+.......+. .
T Consensus 261 c~~~-g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv--t~gK~lg--gG~~Pigav~~~-~~i~~~~~~~~~~~~~T~~ 334 (459)
T PRK11522 261 CDEF-GALLILDEVQTGMGRTGKMFACEHENVQPDIL--CLAKALG--GGVMPIGATIAT-EEVFSVLFDNPFLHTTTFG 334 (459)
T ss_pred HHHc-CCEEEeccceecCCccchhhhhhccCCCCCEE--Eechhhh--CCCccceeEEEc-HHHHHHhccCCcccCCCCC
Confidence 9999 9999999999642 11 11122346776 6789995 24 358888887 7777655311111122 2
Q ss_pred CCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHH
Q psy12791 240 PSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEE 317 (393)
Q Consensus 240 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (393)
.+|..+..+.+.++.++ ...++..+..+.+.+.|+++.. .+|. .+.+.++.|.++.+.+. +.+.
T Consensus 335 gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~---------~i~~VrG~Gl~~giel~-~~~~ 400 (459)
T PRK11522 335 GNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQLAR----EYPD---------LVQEARGKGMLMAIEFV-DNEI 400 (459)
T ss_pred CCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH----hCCC---------ceeeEEeceeEEEEEec-CchH
Confidence 36666666655554432 2344444555555555543210 0110 11122456788999984 4445
Q ss_pred HHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 318 TRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 318 ~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
...+.+.+...++-+... +.....+|+.+....++++++.+.++|+++
T Consensus 401 ~~~i~~~l~~~Gvl~~~~-------------------------~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~ 448 (459)
T PRK11522 401 GYNFASEMFRQRVLVAGT-------------------------LNNAKTIRIEPPLTLTIEQCEQVLKAARKA 448 (459)
T ss_pred HHHHHHHHHHCCeEEEec-------------------------CCCCCEEEEECCccCCHHHHHHHHHHHHHH
Confidence 556666655444333210 011478999999888888888777777654
No 289
>KOG2862|consensus
Probab=99.62 E-value=5.8e-13 Score=115.70 Aligned_cols=210 Identities=19% Similarity=0.233 Sum_probs=153.3
Q ss_pred hHHHHHHHHHHHhCCC---cEEEeccHHHHH-HHHHHhcCCCCeEEEcCC-CccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 60 TRRNLERCIASLEEAK---HGLCYSSGLGAV-TAVTHLLSAGDHIISGDD-VYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~---~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~-~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
...++++-+...+... .-++-++|..++ .++..++.|||.|++-.. .|+- .+...++++|++|..++.+
T Consensus 51 Im~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~---ra~D~~~r~ga~V~~v~~~~G~ 127 (385)
T KOG2862|consen 51 IMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQ---RAADCARRYGAEVDVVEADIGQ 127 (385)
T ss_pred HHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHH---HHHHHHHhhCceeeEEecCccc
Confidence 3456666666666654 356668888898 788889999999886554 4432 4677889999999998775
Q ss_pred --CHHHHHhhcCCC-CcEEEEecCCCCcccccC-HHHHHHHHHhCCCcEEEEeCccCccccc-CCCCCcCcEEEEccccc
Q psy12791 132 --KIENLIKYIKPN-TKMVWIENPTNPLMTVFD-VKAISAVVKQHPDILLVLDNTFLTAYYQ-KSLPWGVDIVLYSLTKY 206 (393)
Q Consensus 132 --d~~~l~~~l~~~-~~~v~l~~p~nptG~~~~-~~~l~~l~~~~~~~~livDea~~~~~~~-~~~~~~~di~~~S~sK~ 206 (393)
.++++.+++.++ +++|++++....||+..| ++.+.++|++| +++++||.+.+.+... ...+++.|+......|.
T Consensus 128 ~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~-~~lllVD~VaSlggt~F~mDewgVDvaytgSQKa 206 (385)
T KOG2862|consen 128 AVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKH-EALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKA 206 (385)
T ss_pred CccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcC-CeEEEEechhhcCCccceehhhcccEEEecchhh
Confidence 689999988764 899999999999999999 78889999999 9999999988754332 22347899999999999
Q ss_pred ccCCCCceEEEEEecChHHHHHHHHHH--------------HhcCCC--------CCHHH------HHHHHhccCCHHHH
Q psy12791 207 MNGHSDVVMGATVTNDDSLQARLKFLQ--------------NSMGVV--------PSPFD------CWLVTRGLKTLPCR 258 (393)
Q Consensus 207 ~~G~~G~r~G~~~~~~~~~~~~~~~~~--------------~~~~~~--------~~~~~------~~~~~~~~~~~~~~ 258 (393)
+++|+| ++.++.+ +...++++... .+|++. ..+.+ +++.+-..+.++.+
T Consensus 207 L~aP~G--LsiisfS-~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~ 283 (385)
T KOG2862|consen 207 LGAPAG--LSIISFS-DKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENS 283 (385)
T ss_pred cCCCCC--cceeecC-HHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 5667776 66666665322 223332 11222 22222223456778
Q ss_pred HHHHHHHHHHHHHHHhhC
Q psy12791 259 LKEHERGSIEVAKFLESH 276 (393)
Q Consensus 259 ~~~~~~~~~~l~~~l~~~ 276 (393)
++++.+..+.+...|+.+
T Consensus 284 ~~rH~e~s~~l~~~l~~~ 301 (385)
T KOG2862|consen 284 WRRHREMSKWLKLSLEAL 301 (385)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 888888888888777764
No 290
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.61 E-value=1.7e-13 Score=141.28 Aligned_cols=286 Identities=16% Similarity=0.161 Sum_probs=175.1
Q ss_pred HHHHHHHHHHHhCCCcEEEeccHH-HH-HHHHH---Hh-cCCCC----eEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 61 RRNLERCIASLEEAKHGLCYSSGL-GA-VTAVT---HL-LSAGD----HIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 61 ~~~lr~~la~~~~~~~~i~~~~G~-~a-l~~~~---~~-~~~gd----~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
..++.+.+++++|.+..-+..+|+ ++ +..++ .+ .++|| +|++++..|+++ ...+...|++++.++.
T Consensus 544 i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~sn----p~sa~~~G~~vv~v~~ 619 (954)
T PRK05367 544 IDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTN----PASAVMAGMKVVVVAC 619 (954)
T ss_pred HHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhh----HHHHHHCCCEEEEECC
Confidence 457888899999998755555554 44 22222 21 34555 599999999763 3446778999999987
Q ss_pred C-----CHHHHHhhcCC---CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccc--ccCCCCCcCcEEE
Q psy12791 131 R-----KIENLIKYIKP---NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAY--YQKSLPWGVDIVL 200 (393)
Q Consensus 131 ~-----d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~--~~~~~~~~~di~~ 200 (393)
+ |+++|++.+++ ++.+|++++|++-.+...|+++|.++|+++ |+++++|.++.... ...+...|+|+++
T Consensus 620 d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~-G~~v~VDgA~~~al~~l~~pg~~GADi~~ 698 (954)
T PRK05367 620 DENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEH-GGQVYLDGANMNAQVGLARPGDIGADVSH 698 (954)
T ss_pred CCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHc-CCEEEEECcChhhccCCCChhhcCCCEEE
Confidence 5 78999998865 467888899998744457899999999999 99999999997432 2345567999999
Q ss_pred Eccccccc-----CCCCceEEEEEecChHHHHHHHHHHH---h----cCCCC-CHH-H------HH--HHHhccCCHHHH
Q psy12791 201 YSLTKYMN-----GHSDVVMGATVTNDDSLQARLKFLQN---S----MGVVP-SPF-D------CW--LVTRGLKTLPCR 258 (393)
Q Consensus 201 ~S~sK~~~-----G~~G~r~G~~~~~~~~~~~~~~~~~~---~----~~~~~-~~~-~------~~--~~~~~~~~~~~~ 258 (393)
.|.||+|+ |.|| +|++.++ +.+...+..... . .+... ++. + ++ +...+.+.+.+.
T Consensus 699 ~s~HK~f~~P~G~GGPg--~G~l~vr-~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~ 775 (954)
T PRK05367 699 LNLHKTFCIPHGGGGPG--VGPIGVK-AHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQA 775 (954)
T ss_pred ecCcccCCCCcCCCCCc--eEEEeec-ccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHH
Confidence 99999974 5566 8898887 444443322110 0 01111 111 0 11 111122334444
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEE-EEcC-CHHHHHHHHHhcCccccccccCC
Q psy12791 259 LKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSF-YVNG-GAEETRIFLESLLIFRCAESLGG 336 (393)
Q Consensus 259 ~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~l~~~~~~~~~g~ 336 (393)
.+....++.++.+.|+.... +.+.+-....- ...++.+ .++. ....++.+.++|...++....
T Consensus 776 a~~~~~~A~Yl~~~L~~~~~---~~~~~~~~~~~----------~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t-- 840 (954)
T PRK05367 776 TEVAILNANYIAKRLKDHYP---VLYTGANGRVA----------HECILDLRPLKESTGITVDDIAKRLIDYGFHAPT-- 840 (954)
T ss_pred HHHHHHHHHHHHHHHHhhcC---ccccCCCCCcc----------cceEEEeecccccCCCCHHHHHHHHHHCCCeEee--
Confidence 45555677777777765322 22221000000 1234444 2221 011234555555433322110
Q ss_pred ccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 337 IESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 337 ~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
...| .++.+|++++..++.+++|+|.+++.++.
T Consensus 841 ----~~~p------------------v~~~l~i~ptE~~s~~elDr~~~al~~i~ 873 (954)
T PRK05367 841 ----MSFP------------------VAGTLMVEPTESESKAELDRFCDAMIAIR 873 (954)
T ss_pred ----cCCc------------------cCCEEEEEeeecCCHHHHHHHHHHHHHHH
Confidence 0001 15789999999999999999999998765
No 291
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.61 E-value=5e-13 Score=113.87 Aligned_cols=213 Identities=15% Similarity=0.154 Sum_probs=150.8
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---- 131 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---- 131 (393)
.|....+-+.||+|+|.+ ++=+|+|+-+- .++.+++++||.|++...+|.+++ -++++.|+++..+|..
T Consensus 60 kPpI~~F~~dlaeFlg~D-~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYtty----vAAEragl~v~eVp~tg~Pe 134 (382)
T COG1103 60 KPPIKDFLEDLAEFLGMD-EVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTY----VAAERAGLNVAEVPNTGYPE 134 (382)
T ss_pred CCcHHHHHHHHHHHhCCc-eeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHH----HHHHhcCCeEEecCCCCCCc
Confidence 466778888899999985 45667887663 666788999999999999987653 3467889999999864
Q ss_pred ---CHHHHHhhcC-------CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC-CCCCcCcEEE
Q psy12791 132 ---KIENLIKYIK-------PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK-SLPWGVDIVL 200 (393)
Q Consensus 132 ---d~~~l~~~l~-------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~-~~~~~~di~~ 200 (393)
+++...+.++ ..+.+.++++|....|.+.|.++++++|+++ |+++++..+|..+.... ....++|+++
T Consensus 135 y~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~-gvPlllN~AYt~Grmpvs~ke~g~DFiV 213 (382)
T COG1103 135 YKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREY-GVPLLLNCAYTVGRMPVSGKEIGADFIV 213 (382)
T ss_pred eEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHc-CCceEeecceeeccccccccccCCCEEE
Confidence 4444444332 2378889999999999999999999999999 99999999999765432 2346899999
Q ss_pred EcccccccCCCCceEEEEEecChHHHHHHHHHH-H--------hcCCCCCHHHHHHHHhccCCHHHHHHHHH---HHHHH
Q psy12791 201 YSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ-N--------SMGVVPSPFDCWLVTRGLKTLPCRLKEHE---RGSIE 268 (393)
Q Consensus 201 ~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 268 (393)
+|.||+++ ..| .+|.+..+ .++.+.+-+.. . ..|++.-......+.+++.....|..+.. ++++.
T Consensus 214 gSGHKsmA-As~-PiGvl~~~-eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~ 290 (382)
T COG1103 214 GSGHKSMA-ASA-PIGVLAMS-EEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARW 290 (382)
T ss_pred ecCccchh-ccC-CeeEEeeh-hHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999995 233 49999987 77777653322 1 23444322222233344444444544443 45566
Q ss_pred HHHHHhhCCCc
Q psy12791 269 VAKFLESHPCV 279 (393)
Q Consensus 269 l~~~l~~~~~~ 279 (393)
+.+-|+.+.++
T Consensus 291 fv~elEkigg~ 301 (382)
T COG1103 291 FVAELEKIGGV 301 (382)
T ss_pred HHHHHHHhhhH
Confidence 66666655544
No 292
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.61 E-value=3.2e-13 Score=130.84 Aligned_cols=285 Identities=17% Similarity=0.142 Sum_probs=159.3
Q ss_pred CCchHHHHHHHHHHHhCCC---cEEEeccHHHHH-HHHH--HhcCCCCeEEEcCCCccchHHHHHHhccc-------CC-
Q psy12791 57 NNPTRRNLERCIASLEEAK---HGLCYSSGLGAV-TAVT--HLLSAGDHIISGDDVYGGTYRYFAQVAPK-------IG- 122 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~---~~i~~~~G~~al-~~~~--~~~~~gd~vl~~~~~y~~~~~~~~~~~~~-------~g- 122 (393)
.++...+|.+.|++..... ...+.+||++|+ .++. .......+|+.-..+|++.......+... ++
T Consensus 95 ~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~ 174 (451)
T PRK06918 95 MYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGP 174 (451)
T ss_pred ccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCC
Confidence 3567788999999887532 467778888886 4442 22233456888888887754322211110 01
Q ss_pred --cEEEeeCCCC-----------------HHHHHhhc----C-CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCC
Q psy12791 123 --LEVDFVDLRK-----------------IENLIKYI----K-PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPD 174 (393)
Q Consensus 123 --~~v~~~~~~d-----------------~~~l~~~l----~-~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~ 174 (393)
..+..+|..+ ++.+++.+ . +++.+|+++..+...|.+++ +++|.++|+++ |
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~-g 253 (451)
T PRK06918 175 FAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH-G 253 (451)
T ss_pred CCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc-C
Confidence 1122232210 11233222 2 35677887776666677665 88999999999 9
Q ss_pred cEEEEeCccCccccc-CCC---CCc--CcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHH
Q psy12791 175 ILLVLDNTFLTAYYQ-KSL---PWG--VDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLV 248 (393)
Q Consensus 175 ~~livDea~~~~~~~-~~~---~~~--~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (393)
+++|+||+|..+... .+. .++ .|++ |++|.+ | +|+|+||++++ +++.+.+...........++..+..+
T Consensus 254 illI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l-~-~G~pig~v~~~-~~i~~~~~~~~~~~T~~g~~l~~aaa 328 (451)
T PRK06918 254 ILFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSL-G-AGVPISGVIGR-KEIMDESAPGELGGTYAGSPLGCAAA 328 (451)
T ss_pred CEEEEeccccCcCccCceehhHhcCCCCCEE--eeehhh-c-CCCccEEEEEc-HHHHhccCCCCcCcCCCcCHHHHHHH
Confidence 999999999875321 111 122 5644 799999 4 78999999997 78877664322222334466666654
Q ss_pred HhccCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc-------CCH
Q psy12791 249 TRGLKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN-------GGA 315 (393)
Q Consensus 249 ~~~~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 315 (393)
...++.+.. ..++..+..+.+.+.|+. ++.+..+ ++.|.++.+.+. ++.
T Consensus 329 ~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~v------------------rg~G~~~~~~~~~~~~~~~~~~ 390 (451)
T PRK06918 329 LAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDV------------------RGLGAMCAFELVQDRKTKEPDK 390 (451)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCceee------------------ccceeEEEEEEccCCCcCCCcH
Confidence 444432211 112222222333333332 2221111 334666666552 123
Q ss_pred HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 316 EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+....+.+.+...++.+..++. ..+.+|++++...++++++...++|.+.
T Consensus 391 ~~~~~l~~~~~~~Gvlv~~~~~-------------------------~~~~lrl~p~l~~t~~~id~~l~~l~~~ 440 (451)
T PRK06918 391 TLTANICKEANKRGLLLLSAGT-------------------------YGNVIRVLMPLVITDEQLEEGLTIIEES 440 (451)
T ss_pred HHHHHHHHHHHHCCeEEeecCC-------------------------CCCEEEEECCCccCHHHHHHHHHHHHHH
Confidence 4456666665554544433211 0368999998765566666555555443
No 293
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.61 E-value=1.6e-13 Score=132.03 Aligned_cols=213 Identities=18% Similarity=0.169 Sum_probs=135.7
Q ss_pred CCCchHHHHHHHHHHHh-CCCcEEEeccHHHHH-HHHHHh--cCCCCeEEEcCCCccchHHHHHHhc---------cc-C
Q psy12791 56 SNNPTRRNLERCIASLE-EAKHGLCYSSGLGAV-TAVTHL--LSAGDHIISGDDVYGGTYRYFAQVA---------PK-I 121 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~-~~~~~i~~~~G~~al-~~~~~~--~~~gd~vl~~~~~y~~~~~~~~~~~---------~~-~ 121 (393)
++.+...+|.++|++.. +.+...++++|++|+ .++... ...+++|+..++.|++......... .. .
T Consensus 87 ~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 166 (426)
T PRK00062 87 APTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSP 166 (426)
T ss_pred CCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCC
Confidence 34567788999998876 344677778888887 555432 2346789999999988532221110 00 0
Q ss_pred Cc------EEEeeCCCCHHHHHhhcC---CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc
Q psy12791 122 GL------EVDFVDLRKIENLIKYIK---PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY 188 (393)
Q Consensus 122 g~------~v~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~ 188 (393)
+. ....++..|++++++.+. +++++|+++.....+|.+.+ +++|.++|++| |+++|+||+|..+..
T Consensus 167 ~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~G~r~ 245 (426)
T PRK00062 167 GVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEH-GALLIFDEVMTGFRV 245 (426)
T ss_pred CCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeechhcccc
Confidence 11 133445568888888774 35788899877777899998 89999999999 999999999985422
Q ss_pred cCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH---HhcCCCCCHHHHHHHHhccCCHHH--H
Q psy12791 189 QKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ---NSMGVVPSPFDCWLVTRGLKTLPC--R 258 (393)
Q Consensus 189 ~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~ 258 (393)
... .....|+ .+++|.+ | .|+++|+++++ +++.+.+.... .......++..+..+...++.+.. .
T Consensus 246 g~~~~~~~~~~~pDi--~~~gK~l-~-~G~p~ga~~~~-~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~ 320 (426)
T PRK00062 246 ALGGAQGYYGVTPDL--TTLGKII-G-GGLPVGAFGGR-REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGF 320 (426)
T ss_pred CCccHHHHhCCCcch--HhhhhHh-h-CCCcceeeeEH-HHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchH
Confidence 111 1122454 5789999 4 67889999887 78888774211 111223456666655555543322 3
Q ss_pred HHHHHHHHHHHHHHHh
Q psy12791 259 LKEHERGSIEVAKFLE 274 (393)
Q Consensus 259 ~~~~~~~~~~l~~~l~ 274 (393)
.++..+....+.+.|+
T Consensus 321 ~~~~~~~~~~~~~~l~ 336 (426)
T PRK00062 321 YEELEALTKRLAEGLK 336 (426)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444444555555554
No 294
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.61 E-value=9e-14 Score=130.07 Aligned_cols=298 Identities=15% Similarity=0.085 Sum_probs=177.9
Q ss_pred CCCccC-CeeeeCCCCCCCCC-ccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHH-hcCCC-CeEEEcCC
Q psy12791 31 PPIILS-TTFKQNTPGQPPQG-FEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTH-LLSAG-DHIISGDD 105 (393)
Q Consensus 31 ~p~~~~-~~~~~~~~~~~~~~-~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~-~~~~g-d~vl~~~~ 105 (393)
..++-. +.+.+++.+++... +....+.++...++.++++++.+.+..++.+||++|+ .++.. ...+| ++|+..+.
T Consensus 36 ~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~ 115 (364)
T PRK04013 36 NVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTN 115 (364)
T ss_pred ccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 344333 44555544443322 1122356778889999999998777788899999997 55432 22234 78999999
Q ss_pred CccchHHHHHHhc----ccCC-----cEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC----HHHHHHHHHhC
Q psy12791 106 VYGGTYRYFAQVA----PKIG-----LEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD----VKAISAVVKQH 172 (393)
Q Consensus 106 ~y~~~~~~~~~~~----~~~g-----~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~ 172 (393)
+|++......... ...+ ..+..++.+|++.+++.+.+++++|+++..+...|...+ +++|.++|+++
T Consensus 116 syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~ 195 (364)
T PRK04013 116 AFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDV 195 (364)
T ss_pred ccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHHhcCCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHc
Confidence 8887532211100 0011 234566677899999999888999999998877777664 99999999999
Q ss_pred CCcEEEEeCccCccccc-----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHH
Q psy12791 173 PDILLVLDNTFLTAYYQ-----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWL 247 (393)
Q Consensus 173 ~~~~livDea~~~~~~~-----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (393)
|+++|+||++..+-.. .......|+++ ++|.++| |+.+|.++.+ .++.. .........+|..+..
T Consensus 196 -gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~--~gK~lgg--G~P~~a~~~~-~~~~~----~~~~~T~~gnp~~~aa 265 (364)
T PRK04013 196 -GALLIADEVQSGLRTGKFLAIEHYKVEPDIVT--MGKGIGN--GVPVSLTLTN-FDVER----GKHGSTFGGNPLACKA 265 (364)
T ss_pred -CCEEEEechhhcCCCCchhHHHhcCCCCCEEE--ecccccC--CceeEEEEec-ccccC----CCcCCCCCcCHHHHHH
Confidence 9999999998853111 11223567775 5799953 6789998887 44411 1121222346777776
Q ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCc
Q psy12791 248 VTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLI 327 (393)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 327 (393)
+.+.++.+++ +.+.++.+.. |+++.. + .+.+.+|.|.++.+++.. + ...+.+.+..
T Consensus 266 a~a~l~~i~~--~~l~~~~~~~---l~~l~~------~----------~v~~vRG~Gl~~gve~~~-~--~~~i~~~~~~ 321 (364)
T PRK04013 266 VAVTLRILRR--ERLVEKAGEK---FIEIKG------E----------RVVTTRGRGLMIGIVLKK-P--VGKYVEELQN 321 (364)
T ss_pred HHHHHHHHHh--ccHHHHHHHH---HHHhcc------C----------cceeeeeCcEEEEEEeCC-c--HHHHHHHHHh
Confidence 6666554432 2222332222 221100 1 112346678889999942 2 2344444333
Q ss_pred cccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 328 FRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 328 ~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
.++.... ...+.+|+.+.+.-++++++.+.+.|++
T Consensus 322 ~Gll~~~---------------------------~g~~vlr~~Ppl~it~~~i~~~~~~l~~ 356 (364)
T PRK04013 322 RGYLVHT---------------------------AGQRVIRLLPPLIISKDTMEEAKSAIEG 356 (364)
T ss_pred CCcEEee---------------------------CCCCEEEEeCCcccCHHHHHHHHHHHHH
Confidence 2322211 0136788888777666666666555554
No 295
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=5.7e-13 Score=128.49 Aligned_cols=284 Identities=13% Similarity=0.093 Sum_probs=169.4
Q ss_pred CCCchHHHHHHHHHHHhCCC---cEEEeccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHhcc-------cCC
Q psy12791 56 SNNPTRRNLERCIASLEEAK---HGLCYSSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQVAP-------KIG 122 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~---~~i~~~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~~-------~~g 122 (393)
+.++...+|.++|++..... ...+.+||++|+ .++.. ......+|+.....|++.......+.. .++
T Consensus 82 ~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~ 161 (445)
T PRK08593 82 MYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYG 161 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCC
Confidence 35677888999999987533 355568889886 54432 222345678778777764322111111 011
Q ss_pred ---cEEEeeCCCC-----------------HHHHHhhc-----CCCCcEEEEecCCCCcccccC----HHHHHHHHHhCC
Q psy12791 123 ---LEVDFVDLRK-----------------IENLIKYI-----KPNTKMVWIENPTNPLMTVFD----VKAISAVVKQHP 173 (393)
Q Consensus 123 ---~~v~~~~~~d-----------------~~~l~~~l-----~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~ 173 (393)
..+..+|..+ ++++++.+ .+++.+|+++..++..|.+.+ +++|.++|+++
T Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~- 240 (445)
T PRK08593 162 PLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH- 240 (445)
T ss_pred CCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc-
Confidence 1233333221 13344333 246889999999988898876 99999999999
Q ss_pred CcEEEEeCccCcc-ccc-----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHH
Q psy12791 174 DILLVLDNTFLTA-YYQ-----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWL 247 (393)
Q Consensus 174 ~~~livDea~~~~-~~~-----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (393)
|+++|+||++..+ ... .......|++ +++|.++ .|+++|+++++ +++.+.+...........++..+..
T Consensus 241 g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~--t~gK~l~--~G~p~gav~~~-~~i~~~~~~~~~~~T~~~~pl~~aa 315 (445)
T PRK08593 241 GILFAVDDIQQGLGRTGKWSSISHFNITPDLM--SFGKSLA--GGMPMSAIVGR-KEIMESLEAPAHLFTTGANPVSCAA 315 (445)
T ss_pred CCEEEEechhhCCCcCchHHHHHhcCCCCCEe--eeccccc--CCcccEEEEEc-HHHHhhhccCCCCCCCCCCHHHHHH
Confidence 9999999999653 111 1112345766 6889994 46789999997 8888876422222233355666665
Q ss_pred HHhccCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-------C
Q psy12791 248 VTRGLKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-------G 314 (393)
Q Consensus 248 ~~~~~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 314 (393)
+...++.+++ ..++..+..+.+.+.|++ ++.+. +.++.|.++.+.+.. +
T Consensus 316 a~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~------------------~vrG~Gl~~gi~l~~~~~~~~~~ 377 (445)
T PRK08593 316 ALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVG------------------DVRGYGLSIGIDIVSDKKLKTRD 377 (445)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCcEE------------------EEeccceEEEEEEecCCCcCCCc
Confidence 5555544322 334444444555555543 22222 224566777777632 1
Q ss_pred HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 315 AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
......+.+.+...++-+.. .....+|+++.+..++++++.+.+++++.
T Consensus 378 ~~~~~~~~~~~~~~Gv~~~~---------------------------~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 426 (445)
T PRK08593 378 NEAALKICNYCFEHGVVIIA---------------------------VAGNVLRFQPPLVITYEQLDTALNTIEQA 426 (445)
T ss_pred HHHHHHHHHHHHHCCeEEec---------------------------cCCCEEEEECCCccCHHHHHHHHHHHHHH
Confidence 23344555554433322110 01368999999999999998888887754
No 296
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.60 E-value=2.3e-13 Score=138.12 Aligned_cols=160 Identities=17% Similarity=0.164 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHhCCCc-EEEeccHHHH-HHHHHHh---c-----CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 61 RRNLERCIASLEEAKH-GLCYSSGLGA-VTAVTHL---L-----SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 61 ~~~lr~~la~~~~~~~-~i~~~~G~~a-l~~~~~~---~-----~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
..++++.|+++.|.+. .+..++|+.+ +..+++. . ...++|+++.-.|++ ....++..|++++.++.
T Consensus 532 i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgt----nPasa~~~G~~Vv~V~~ 607 (939)
T TIGR00461 532 IAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGT----NPASAAMAGMQVVPVNC 607 (939)
T ss_pred HHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCc----CHHHHHHCCCEEEEecc
Confidence 4678899999999985 5566677765 3222221 1 124578899988875 34457788999999988
Q ss_pred C-----CHHHHHhhcCC---CCcEEEEecCCCCcccccC-HHHHHHHHHhCCCcEEEEeCccCccc--ccCCCCCcCcEE
Q psy12791 131 R-----KIENLIKYIKP---NTKMVWIENPTNPLMTVFD-VKAISAVVKQHPDILLVLDNTFLTAY--YQKSLPWGVDIV 199 (393)
Q Consensus 131 ~-----d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~-~~~l~~l~~~~~~~~livDea~~~~~--~~~~~~~~~di~ 199 (393)
+ |+++|++.+++ ++++|++++|+| +|.+.+ +++|.++|+++ |.++++|.++.... ...|-..++|++
T Consensus 608 d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~-G~~v~VDgAq~~al~~l~~Pg~~GaDi~ 685 (939)
T TIGR00461 608 DQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSF-GGQVYLDGANMNAQVGLTSPGDLGADVC 685 (939)
T ss_pred CCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHc-CCEEEEEecChhhCCCCCCccccCCCEE
Confidence 5 89999999974 799999999999 788887 99999999999 99999999996522 234556799999
Q ss_pred EEccccccc-----CCCCceEEEEEecChHHHHHH
Q psy12791 200 LYSLTKYMN-----GHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 200 ~~S~sK~~~-----G~~G~r~G~~~~~~~~~~~~~ 229 (393)
++|.||+|+ |.|| +|++.++ +.+...+
T Consensus 686 ~~s~HKtf~~P~G~GGPg--~G~i~vr-~~L~~~l 717 (939)
T TIGR00461 686 HLNLHKTFCIPHGGGGPG--MGPIGVK-SHLIPFL 717 (939)
T ss_pred EecCCccCCCCCCCCCCC--eEEEEEh-hhchhhc
Confidence 999999887 6677 8999998 5554443
No 297
>PRK15029 arginine decarboxylase; Provisional
Probab=99.60 E-value=1.5e-13 Score=137.40 Aligned_cols=157 Identities=15% Similarity=0.074 Sum_probs=125.8
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
++....+.++.+|+.+|++...+++||++. + .++++++++||+|+++..+|-+.+ +.+...|+..++++..
T Consensus 203 p~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~----~al~L~ga~Pvyl~P~~~~ 278 (755)
T PRK15029 203 HTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE----QGLILTGAKPVYMVPSRNR 278 (755)
T ss_pred CCcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH----HHHHHcCCeEEEecccccc
Confidence 456778899999999999999999999886 7 778889999999999999998743 4567789999998642
Q ss_pred -------C-----HHHHHhhcCC--CCc--------EEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc
Q psy12791 132 -------K-----IENLIKYIKP--NTK--------MVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ 189 (393)
Q Consensus 132 -------d-----~~~l~~~l~~--~~~--------~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~ 189 (393)
+ ++.+++++.. .++ ++++++|+. -|.+.++++|.++|+++ +++|++|||++.....
T Consensus 279 ~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~-~~~llvDEAhGah~~F 356 (755)
T PRK15029 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKT-SDRLHFDEAWYGYARF 356 (755)
T ss_pred cCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhc-CCeEEEECcccccccc
Confidence 2 7788887743 244 899999985 49999999999999999 9999999999873211
Q ss_pred -------CCC-----C-CcCc-EEEEcccccccCCCCceEEEEEec
Q psy12791 190 -------KSL-----P-WGVD-IVLYSLTKYMNGHSDVVMGATVTN 221 (393)
Q Consensus 190 -------~~~-----~-~~~d-i~~~S~sK~~~G~~G~r~G~~~~~ 221 (393)
.++ . .|+| +++.|.||.++++.. ..++-.+
T Consensus 357 ~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQ--aS~LHv~ 400 (755)
T PRK15029 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQ--ASYIHVR 400 (755)
T ss_pred CccccccccccccccccCCCceEEEEchhhcccchhh--hhhheeC
Confidence 223 2 5788 999999999865543 5555543
No 298
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.60 E-value=5.4e-13 Score=128.24 Aligned_cols=289 Identities=16% Similarity=0.111 Sum_probs=164.1
Q ss_pred CCchHHHHHHHHHHHhC----CCcEE-Ee-ccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHhc------ccC
Q psy12791 57 NNPTRRNLERCIASLEE----AKHGL-CY-SSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQVA------PKI 121 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~----~~~~i-~~-~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~------~~~ 121 (393)
.++...+|.++|++.+. ..+.+ ++ +||++|+ .++.. ......+|+.....|++......... ...
T Consensus 80 ~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~ 159 (425)
T PRK09264 80 HTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGA 159 (425)
T ss_pred CcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCC
Confidence 35667778888888642 22234 44 5999987 44432 23334578888888877432211110 011
Q ss_pred C---cEEEeeCC--------CCHHHHHhhcC------CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEe
Q psy12791 122 G---LEVDFVDL--------RKIENLIKYIK------PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLD 180 (393)
Q Consensus 122 g---~~v~~~~~--------~d~~~l~~~l~------~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livD 180 (393)
+ ..+..+|. +|++++++.+. +++.+|+++......|.+.+ +++|.++|++| |+++|+|
T Consensus 160 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~-g~llI~D 238 (425)
T PRK09264 160 GVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKH-DILLIVD 238 (425)
T ss_pred CCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CcEEEEe
Confidence 1 13445554 25677777774 24678999988888887653 99999999999 9999999
Q ss_pred CccCccc------ccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC
Q psy12791 181 NTFLTAY------YQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT 254 (393)
Q Consensus 181 ea~~~~~------~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (393)
|++..+. .........|++ +++|.+ |..|+++|+++++ +++ ..+...........++..+..+...++.
T Consensus 239 EV~tG~GrtG~~~~~~~~~v~PDi~--t~~K~l-~~~G~pigav~~~-~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~ 313 (425)
T PRK09264 239 DIQAGCGRTGTFFSFERAGITPDIV--TLSKSI-SGYGLPMALVLIK-PEL-DVWKPGEHNGTFRGNNLAFVTATAALEE 313 (425)
T ss_pred chhhCCccccHHHHHhhcCCCCCEE--Eecccc-CCCccceEEEEEc-hhh-hccCCCccCCCCCCCHHHHHHHHHHHHH
Confidence 9997421 111122356765 568999 5668999999998 555 3332111111112334444444333311
Q ss_pred -HH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccc
Q psy12791 255 -LP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCA 331 (393)
Q Consensus 255 -~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 331 (393)
+. ...++..++...+.+.|+.+.. .+|.. ..+.++.|.++++.+. +.+....+.+.+...++.
T Consensus 314 ~~~~~~l~~~~~~~g~~l~~~l~~l~~----~~~~~---------~~~vrg~Gl~~~i~l~-~~~~~~~l~~~~~~~Gv~ 379 (425)
T PRK09264 314 YWSDDAFEKEVKAKGELVRERLEEIAA----KYPGL---------GAEVRGRGMMQGIDFG-DGELAGKIAAEAFENGLI 379 (425)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHH----hCCCc---------eecceecccEEEEEec-ChHHHHHHHHHHHHCCCE
Confidence 11 1233444444555555543210 01110 0112345677899994 555566676666544433
Q ss_pred cccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 332 ESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 332 ~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+...+ .....||+++.+..++++++.+.+.|.+.
T Consensus 380 ~~~~~-------------------------~~~~~lr~~p~l~~t~~ei~~~~~~l~~~ 413 (425)
T PRK09264 380 IETSG-------------------------PEDEVVKLLPPLTIDEEELEEGLDILEEA 413 (425)
T ss_pred EeccC-------------------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 32111 11468999988888877777666666543
No 299
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.59 E-value=1.7e-15 Score=136.74 Aligned_cols=236 Identities=21% Similarity=0.183 Sum_probs=157.2
Q ss_pred cCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHH
Q psy12791 35 LSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRY 113 (393)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~ 113 (393)
+.+...+++.........|+ .++...+|++.+++++|.+..+++.+|+.+. .++..+++|++.|++.++.|-..+ +
T Consensus 7 ~~~~m~~a~~~a~~gd~~Yg--~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~-E 83 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDDAYG--EDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFD-E 83 (290)
T ss_dssp S-HHEEHHHHHTTSB-CCTT--SSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHS-S
T ss_pred CCHHHHHHHHccccCCcccC--CChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeee-c
Confidence 44455555533221112355 3789999999999999999999999999996 778888899999999988764211 1
Q ss_pred HHHhcccCCcEEEeeCCC-----CHHHHHhhcCC------CCcEEEEecCCCCc-ccccC---HHHHHHHHHhCCCcEEE
Q psy12791 114 FAQVAPKIGLEVDFVDLR-----KIENLIKYIKP------NTKMVWIENPTNPL-MTVFD---VKAISAVVKQHPDILLV 178 (393)
Q Consensus 114 ~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~------~~~~v~l~~p~npt-G~~~~---~~~l~~l~~~~~~~~li 178 (393)
-.......|.+++.++.. +++++++.+.+ ++++|++++|+|.. |.+++ +++|.++|+++ |+.++
T Consensus 84 ~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~-gl~lh 162 (290)
T PF01212_consen 84 TGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREH-GLPLH 162 (290)
T ss_dssp TTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHH-T-EEE
T ss_pred cchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhC-ceEEE
Confidence 112224578999888764 68888888753 47899999999874 77776 66778889999 99999
Q ss_pred EeCccCcccc---c---CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCC---HHHH----
Q psy12791 179 LDNTFLTAYY---Q---KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPS---PFDC---- 245 (393)
Q Consensus 179 vDea~~~~~~---~---~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---- 245 (393)
+|.+-..... . ..+..++|++..|++|.+ |.++ .+.++++ +++++.....+...|..+. ...+
T Consensus 163 mDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~-g~~~--Gavl~~~-~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~ 238 (290)
T PF01212_consen 163 MDGARLANAAAALGVSLAEIAAGADSVSFGGTKNG-GAPG--GAVLAGN-KEFIAKARRQRKRLGGGMRQAGVLAAAELY 238 (290)
T ss_dssp EEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT--SSS--EEEEEES-HHHHHHHHHHHHHHTHHHHHTTHHHHHHHH
T ss_pred EehhhHHHhhhcccccHHHHhhhCCEEEEEEEccc-cccc--ceEEEec-hHHHHHHHHHHHHhccCeeecceeeeechh
Confidence 9998653111 1 112247899999999998 5665 7777776 7766655444443333211 1111
Q ss_pred -HHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCC
Q psy12791 246 -WLVTRGLKTLPCRLKEHERGSIEVAKFLESHPC 278 (393)
Q Consensus 246 -~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (393)
......++....+..+..++++++.+.|+..+.
T Consensus 239 ~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~~~ 272 (290)
T PF01212_consen 239 QFAALRALELWLERARHANAMAKRLAAGLEALGG 272 (290)
T ss_dssp HHHHHCHEECSHHHHHCHHHHHHCHHHCHHEECE
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHCCC
Confidence 133444455455666677788888888886554
No 300
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.59 E-value=4.4e-14 Score=125.24 Aligned_cols=288 Identities=15% Similarity=0.144 Sum_probs=149.4
Q ss_pred chHHHHHHHHHHHh---CC---C-cEEEeccHHHHH-HH-HHHhcCC------CCeEEEcCCCccchHHHHHHhcccCCc
Q psy12791 59 PTRRNLERCIASLE---EA---K-HGLCYSSGLGAV-TA-VTHLLSA------GDHIISGDDVYGGTYRYFAQVAPKIGL 123 (393)
Q Consensus 59 ~~~~~lr~~la~~~---~~---~-~~i~~~~G~~al-~~-~~~~~~~------gd~vl~~~~~y~~~~~~~~~~~~~~g~ 123 (393)
-...+|++.|-+++ |- + .-|++++|++.+ .+ +.++... --.|+...|.|+. |+....-+.-
T Consensus 43 f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~----Y~~qt~~f~s 118 (363)
T PF04864_consen 43 FISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSS----YPEQTDFFDS 118 (363)
T ss_dssp TS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CH----HHHHCCCT-B
T ss_pred eccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccc----hHHHHHhccc
Confidence 34566777777664 32 2 589999999985 44 4444211 1368999999983 6655443322
Q ss_pred EEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCC--CcCcEEEE
Q psy12791 124 EVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLP--WGVDIVLY 201 (393)
Q Consensus 124 ~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~--~~~di~~~ 201 (393)
....+.- |...+...-.+.+-+=++++||||.|.+- + .+++.. +..+|.|-+|-.+++ .|+. .+-||+++
T Consensus 119 ~~y~w~G-da~~~~~~~~~~~~IElVTSPNNPDG~lr--~---~V~~g~-~~k~I~D~AYYWPhy-TpI~~~aD~DiMLF 190 (363)
T PF04864_consen 119 RLYKWAG-DASNFKNSDNPSPYIELVTSPNNPDGQLR--E---AVLNGS-SGKVIHDLAYYWPHY-TPITAPADHDIMLF 190 (363)
T ss_dssp TTEEEEE-ECCCGTT-S-CCGEEEEEESS-TTT-----------SSTTT-EEEEEEE-TT-STTT-S---S-B--SEEEE
T ss_pred cCccccc-cHHhhccCCCCCCeEEEEeCCCCCccccc--c---hhcCCC-Ccceeeeeeeecccc-cccCCCCCCceEEE
Confidence 2111111 21122111112345667799999999864 1 223334 667899999998775 3443 45689999
Q ss_pred cccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHH--------------HHHHHHHHHH
Q psy12791 202 SLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPC--------------RLKEHERGSI 267 (393)
Q Consensus 202 S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~ 267 (393)
|+||.- |++|-|+||.+.+++++.+++..........++-..+.-+++.++.+.. ..+...++-+
T Consensus 191 T~SK~T-GHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~ 269 (363)
T PF04864_consen 191 TLSKLT-GHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWE 269 (363)
T ss_dssp EHHHHC-S-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHH
T ss_pred EEeccc-CccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHH
Confidence 999998 8999999999999999999887666555555666655544444432211 1222233444
Q ss_pred HHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhcCccccccccCCccccccCccc
Q psy12791 268 EVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESLLIFRCAESLGGIESLADLPAE 346 (393)
Q Consensus 268 ~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~ 346 (393)
+|.+.+.... ++..+.++. .......+.....+.+.|+.... ..++...++++.++.+......
T Consensus 270 ~L~~~~~~S~---rFSLq~~~~-~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~I~tr~G~~f----------- 334 (363)
T PF04864_consen 270 KLRAAVSASK---RFSLQKFSP-QYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAKIITRSGVLF----------- 334 (363)
T ss_dssp HHHHHHCCSS---SEEE---SC-EEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTTEEEEEGGGG-----------
T ss_pred HHHHHHHhcC---ceecCcCCc-hhccccccccCCCCCeEEEecCCcccccHHHHHHhCCcccCCCCcc-----------
Confidence 5555554322 234444321 11222223333346788999852 2346777877766654333222
Q ss_pred ccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 347 MTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 347 ~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
|....++|||+ -.+++..+.|.+-|+++
T Consensus 335 --------------ga~~ryVRlSm--l~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 335 --------------GADSRYVRLSM--LKRDDDFDQLLERLSKL 362 (363)
T ss_dssp --------------TS-TTEEEEES--SS-HHHHHHHHHHHHCC
T ss_pred --------------CCCCCeEEEec--cCCHHHHHHHHHHHHhh
Confidence 23478999998 55666666666655543
No 301
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=1.4e-12 Score=125.95 Aligned_cols=286 Identities=15% Similarity=0.102 Sum_probs=169.7
Q ss_pred CCchHHHHHHHHHHHhCC---CcEEEeccHHHHH-HHHH--HhcCCCCeEEEcCCCccchHHHHHHhcc-----cCC---
Q psy12791 57 NNPTRRNLERCIASLEEA---KHGLCYSSGLGAV-TAVT--HLLSAGDHIISGDDVYGGTYRYFAQVAP-----KIG--- 122 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~---~~~i~~~~G~~al-~~~~--~~~~~gd~vl~~~~~y~~~~~~~~~~~~-----~~g--- 122 (393)
+++...++.+.|++.... +...+.+||++|+ .++. ......++|+....+|++.......+.. ..+
T Consensus 97 ~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~ 176 (443)
T PRK06058 97 PYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGP 176 (443)
T ss_pred CCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCC
Confidence 456667888888887642 2577889998887 4443 1223447899889988875422221110 011
Q ss_pred --cEEEeeCC----CC---------------HHHHHhhcC-CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcE
Q psy12791 123 --LEVDFVDL----RK---------------IENLIKYIK-PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDIL 176 (393)
Q Consensus 123 --~~v~~~~~----~d---------------~~~l~~~l~-~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~ 176 (393)
-.+..++. ++ ++.+++.+. +++.+|+++..+...|.+.| +++|.++|++| |++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~-gil 255 (443)
T PRK06058 177 FAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCREN-GVV 255 (443)
T ss_pred CCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc-CCE
Confidence 11222221 11 223334443 45778888766666676665 99999999999 999
Q ss_pred EEEeCccCcccc-c-----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHh
Q psy12791 177 LVLDNTFLTAYY-Q-----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTR 250 (393)
Q Consensus 177 livDea~~~~~~-~-----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (393)
+|+||++..+.. . .......|+++ ++|.++ .|+++|+++++ +++.+.+...........++..+..+.+
T Consensus 256 lI~DEV~tGfgRtG~~fa~~~~gv~PDiv~--~gK~l~--~G~Pi~av~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a 330 (443)
T PRK06058 256 FIADEVQTGFARTGAWFACEHEGIVPDLIT--TAKGIA--GGLPLSAVTGR-AEIMDAPHPGGLGGTYGGNPVACAAALA 330 (443)
T ss_pred EEEeccccCCCcChhhhHHHhcCCCCCEEE--Eccccc--CCCccEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHH
Confidence 999999986421 1 11123467775 569994 57899999997 7887766432222222346777766666
Q ss_pred ccCCHHH--HHHHHHHHHHHHHHHHhhC----CCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC------CHHHH
Q psy12791 251 GLKTLPC--RLKEHERGSIEVAKFLESH----PCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG------GAEET 318 (393)
Q Consensus 251 ~~~~~~~--~~~~~~~~~~~l~~~l~~~----~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 318 (393)
.++.+.+ ..++..+....+.+.|+++ +.+. +.++.|.++.+.+.. +.+..
T Consensus 331 ~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrg~G~~~~i~~~~~~~~~~~~~~~ 392 (443)
T PRK06058 331 AIETIEEDDLVARARQIEALMTDRLRALAAEDDRIG------------------DVRGRGAMIAIELVKPGTTEPDAELT 392 (443)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEE------------------eeeccceEEEEEEecCCCCCCcHHHH
Confidence 6654322 2333334444555555432 2211 124567787787732 12345
Q ss_pred HHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 319 RIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 319 ~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+++.+...++.+..++. ..+.||+.+.+..++++++.+.++|++..
T Consensus 393 ~~l~~~~~~~Gv~~~~~~~-------------------------~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l 440 (443)
T PRK06058 393 KALAAAAHAAGVIVLTCGT-------------------------YGNVIRLLPPLVIGDELLREGLDVLEAAL 440 (443)
T ss_pred HHHHHHHHHCCeEEeccCC-------------------------CCCEEEEECCCccCHHHHHHHHHHHHHHH
Confidence 5566555444443322111 13689999999999888888888877653
No 302
>PLN02590 probable tyrosine decarboxylase
Probab=99.58 E-value=7.3e-13 Score=128.90 Aligned_cols=287 Identities=16% Similarity=0.154 Sum_probs=180.6
Q ss_pred CchHHHHHHH----HHHHhCCCc---------EEEeccHHHHH-HHHHHh----cC-------CCCeEEEcCCCccchHH
Q psy12791 58 NPTRRNLERC----IASLEEAKH---------GLCYSSGLGAV-TAVTHL----LS-------AGDHIISGDDVYGGTYR 112 (393)
Q Consensus 58 ~~~~~~lr~~----la~~~~~~~---------~i~~~~G~~al-~~~~~~----~~-------~gd~vl~~~~~y~~~~~ 112 (393)
.|...++++. +++++|.++ .+++++|+++. .++.+. .+ +.-.|.+++.+|.+
T Consensus 165 sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~S--- 241 (539)
T PLN02590 165 SPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSS--- 241 (539)
T ss_pred CchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHH---
Confidence 4555555555 566677663 46677777774 443321 11 11144567777774
Q ss_pred HHHHhcccCCc---EEEeeCCC-------CHHHHHhhcCCC------CcEEEEecCCCCcccccCHHHHHHHHHhCCCcE
Q psy12791 113 YFAQVAPKIGL---EVDFVDLR-------KIENLIKYIKPN------TKMVWIENPTNPLMTVFDVKAISAVVKQHPDIL 176 (393)
Q Consensus 113 ~~~~~~~~~g~---~v~~~~~~-------d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~ 176 (393)
+.++++..|+ .++.+|.+ |+++|++++.++ +-+|+.+..+..||.+-|+++|.++|+++ ++|
T Consensus 242 -v~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~-g~W 319 (539)
T PLN02590 242 -FRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKY-GIW 319 (539)
T ss_pred -HHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHh-CCe
Confidence 6788888887 46666654 788998888542 44666688899999999999999999999 999
Q ss_pred EEEeCccCcccccCCC----C---CcCcEEEEcccccccCCCCceEEEEEecChH-HHHHHHHHHHhc------------
Q psy12791 177 LVLDNTFLTAYYQKSL----P---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDS-LQARLKFLQNSM------------ 236 (393)
Q Consensus 177 livDea~~~~~~~~~~----~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~-~~~~~~~~~~~~------------ 236 (393)
++||.||+.+....+. . ..+|-+..++|||+.-+.+ .|.+..+++. +.+.+.....+.
T Consensus 320 lHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~--cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d 397 (539)
T PLN02590 320 LHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQT--CSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVN 397 (539)
T ss_pred EEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcC--EEEEEecCHHHHHHHhhcCHHHhCCcccccccCCC
Confidence 9999999986532221 1 2479999999999853443 8888887653 333332111111
Q ss_pred --------CCCCCHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcce
Q psy12791 237 --------GVVPSPFDCWLVTRG--LKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGM 306 (393)
Q Consensus 237 --------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~ 306 (393)
+-....+..|+.++. .+.+..++++..+.++.+.+.+++.+.++-+..|. -++
T Consensus 398 ~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~-----------------l~i 460 (539)
T PLN02590 398 YKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRY-----------------FSL 460 (539)
T ss_pred ccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc-----------------eEE
Confidence 001112233444333 35577788888899999999999888766443333 256
Q ss_pred EEEEEcC---C----HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEec-CCChHH
Q psy12791 307 LSFYVNG---G----AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVG-VEGYTD 378 (393)
Q Consensus 307 ~~~~~~~---~----~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~-~~~~~~ 378 (393)
+.|+..+ + .+.+.++++++..-+...-. +. .+ ...-+||+++. ..++++
T Consensus 461 VcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs---------~t-----~~---------~g~~~lR~~i~n~~T~~~ 517 (539)
T PLN02590 461 VCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFIS---------HT-----AL---------SGKFVLRFAVGAPLTEEK 517 (539)
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEE---------ee-----EE---------CCEEEEEEEecCCCCCHH
Confidence 7777643 2 23345666665432222110 00 00 01358999996 557788
Q ss_pred HHHHHHHHHHHhh
Q psy12791 379 LIADLDQALRKAC 391 (393)
Q Consensus 379 ~i~~l~~al~~~~ 391 (393)
+++.+.+.+.+.+
T Consensus 518 dv~~~~~~i~~~a 530 (539)
T PLN02590 518 HVTEAWQIIQKHA 530 (539)
T ss_pred HHHHHHHHHHHHH
Confidence 8888887776643
No 303
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.58 E-value=2.6e-13 Score=122.16 Aligned_cols=236 Identities=19% Similarity=0.211 Sum_probs=162.8
Q ss_pred HHHHHHHHhCCC-cEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHh--cccCC--cEEEeeCCC------
Q psy12791 64 LERCIASLEEAK-HGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQV--APKIG--LEVDFVDLR------ 131 (393)
Q Consensus 64 lr~~la~~~~~~-~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~--~~~~g--~~v~~~~~~------ 131 (393)
..+...+++|++ ..+-..||++|. .+..++++|||+|+..+..+++.. ... ....| .+++.++.+
T Consensus 77 aierak~LFga~~anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHl---tHg~~v~~sG~~~~~v~Y~vd~et~~I 153 (413)
T COG0112 77 AIERAKKLFGAEYANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHL---THGSPVNFSGKLFNVVSYGVDPETGLI 153 (413)
T ss_pred HHHHHHHHhCCCccccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcc---cCCCCCCccceeEEeEecccccccCcc
Confidence 345556689998 588899999996 888999999999998888776521 111 11112 456666654
Q ss_pred CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcc-----cccCCCCCcCcEEEEcccc
Q psy12791 132 KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTA-----YYQKSLPWGVDIVLYSLTK 205 (393)
Q Consensus 132 d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~-----~~~~~~~~~~di~~~S~sK 205 (393)
|.|++++...+ ++|+|+.-....| ...|.+++.++|++. |++|++|.++..+ .+++|+.. +|+++.|.||
T Consensus 154 DyD~~~k~a~e~kPK~ii~G~SaY~--r~id~~~~reIad~V-GA~L~~DmAHiaGLVA~G~~p~P~~~-AdvVTtTTHK 229 (413)
T COG0112 154 DYDEVEKLAKEVKPKLIIAGGSAYS--RPIDFKRFREIADEV-GAYLMVDMAHVAGLIAGGVHPNPLPH-ADVVTTTTHK 229 (413)
T ss_pred CHHHHHHHHHHhCCCEEEECccccc--cccCHHHHHHHHHHh-CceEEehHHHHHHHHhcccCCCCCCc-cceEeCCccc
Confidence 78888887654 6899998554444 577999999999999 9999999999874 45577776 9999999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHH------Hhcc-CCHHHHHHHHHHHHHHHHHHHhhCCC
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLV------TRGL-KTLPCRLKEHERGSIEVAKFLESHPC 278 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (393)
++.|| |+|.+.++++++.+++..... .|....|....++ .+.+ ..+....++..+|++.|++.|.+..
T Consensus 230 TlrGP---rGG~Il~~~eel~kkin~aVF-Pg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G- 304 (413)
T COG0112 230 TLRGP---RGGIILTNDEELAKKINSAVF-PGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERG- 304 (413)
T ss_pred CCCCC---CceEEEeccHHHHHHhhhhcC-CccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 99665 799999987789998875433 2333334332222 1222 2346667778899999999998743
Q ss_pred cceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc--C-CHHHHHHHHHhcCc
Q psy12791 279 VKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN--G-GAEETRIFLESLLI 327 (393)
Q Consensus 279 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~l~~ 327 (393)
..-+ .+... ..++-+.+. + +-..++..+++..+
T Consensus 305 ~~vv--sGgTd--------------nHl~lVDl~~~~~~Gk~ae~~L~~~~I 340 (413)
T COG0112 305 FKVV--SGGTD--------------NHLVLVDLRSKGLTGKKAEAALERAGI 340 (413)
T ss_pred CeEe--cCCcc--------------ceEEEEEcccCCCCHHHHHHHHHHcCE
Confidence 2211 22111 245555554 1 45677777777654
No 304
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.57 E-value=6.5e-13 Score=127.35 Aligned_cols=288 Identities=17% Similarity=0.087 Sum_probs=162.6
Q ss_pred CCCCchHHHHHHHHHHHhCC---CcEEEeccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHhc-----ccCC-
Q psy12791 55 RSNNPTRRNLERCIASLEEA---KHGLCYSSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQVA-----PKIG- 122 (393)
Q Consensus 55 ~~~~~~~~~lr~~la~~~~~---~~~i~~~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~-----~~~g- 122 (393)
.++++...+|.+.|++.... +...+.+||++|+ .++.. ......+|+.-...|++.......+. ...+
T Consensus 79 ~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~ 158 (425)
T PRK07495 79 VVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGF 158 (425)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCC
Confidence 34567778889999887753 2467778889887 44432 22334578887888876432111110 0111
Q ss_pred ----cEEEeeCCCC----------HHHHHhhcC-----CCCcEEEEecCCCCccccc-C---HHHHHHHHHhCCCcEEEE
Q psy12791 123 ----LEVDFVDLRK----------IENLIKYIK-----PNTKMVWIENPTNPLMTVF-D---VKAISAVVKQHPDILLVL 179 (393)
Q Consensus 123 ----~~v~~~~~~d----------~~~l~~~l~-----~~~~~v~l~~p~nptG~~~-~---~~~l~~l~~~~~~~~liv 179 (393)
..+..+|..+ ++++++.+. ++.++|+++..+..+|... | +++|.++|++| |+++|+
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~-g~llI~ 237 (425)
T PRK07495 159 GAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQH-GILLIA 237 (425)
T ss_pred CCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEE
Confidence 1234444432 444555542 3578888877666678554 3 88999999999 999999
Q ss_pred eCccCccccc-CC--C-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCH
Q psy12791 180 DNTFLTAYYQ-KS--L-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTL 255 (393)
Q Consensus 180 Dea~~~~~~~-~~--~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (393)
||+|..+... .. . ..+...-+.+++|.++ .|+++|+++++ +++.+.+...........++..+..+...++.+
T Consensus 238 DEv~tG~gr~G~~~a~~~~gv~pDi~tlsK~l~--~G~pigav~~~-~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l 314 (425)
T PRK07495 238 DEVQTGFARTGKLFAMEHHEVAADLTTMAKGLA--GGFPLAAVTGR-AEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVI 314 (425)
T ss_pred echhhcCCcCCCceeecccCCCCCEEeehhhhc--CCccceEEEEc-HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHH
Confidence 9999853211 11 1 1233333567899994 57899999997 788776643222222334666666555544433
Q ss_pred HH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC------HHHHHHHHH
Q psy12791 256 PC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG------AEETRIFLE 323 (393)
Q Consensus 256 ~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 323 (393)
.. ..++..+..+.+.+.|+. +|.+.. .++.|.++++.+.++ .+....+.+
T Consensus 315 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~------------------vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~ 376 (425)
T PRK07495 315 EEEDLCERANQLGNRLKQRLASLRETVPEIAD------------------IRGPGFMNAVEFNDADSGLPSAEFANRVRL 376 (425)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHhhCCCeee------------------eecCceEEEEEEecCCCCCccHHHHHHHHH
Confidence 21 223333334444444432 222221 244577889988421 122344544
Q ss_pred hcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 324 SLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 324 ~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
.+...++-+... |...+.|||.+.+.-++++++.+.++|++
T Consensus 377 ~~~~~Gvl~~~~-------------------------g~~~~~~r~~Ppl~it~~~id~~~~~l~~ 417 (425)
T PRK07495 377 KALEKGLILLTC-------------------------GVHGNVIRFLAPITIQDDVFAEALDILEA 417 (425)
T ss_pred HHHHCCeEEeec-------------------------CCCCCEEEEeCCCccCHHHHHHHHHHHHH
Confidence 443333222110 11146788887777666666655555543
No 305
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.57 E-value=2.6e-12 Score=120.71 Aligned_cols=323 Identities=15% Similarity=0.085 Sum_probs=189.1
Q ss_pred CCCCC-CC--CCCCC-ccCCeeeeCCCCCCCCCc-cccCC-CCchHHHHHHHHHHHhCC---CcEEEeccHHHHH-HHHH
Q psy12791 22 DQWRS-QC--VIPPI-ILSTTFKQNTPGQPPQGF-EYSRS-NNPTRRNLERCIASLEEA---KHGLCYSSGLGAV-TAVT 91 (393)
Q Consensus 22 ~~~~~-~~--~~~p~-~~~~~~~~~~~~~~~~~~-~y~~~-~~~~~~~lr~~la~~~~~---~~~i~~~~G~~al-~~~~ 91 (393)
..++| .+ +...+ +..|.+.+++.+++.... .-.++ ..+.+.++.++|.+.... +.+.+.+||++|+ .++.
T Consensus 56 ~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiK 135 (447)
T COG0160 56 NEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIK 135 (447)
T ss_pred CEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHH
Confidence 45566 22 33333 344556655544332222 11222 226677788888887654 3588889999997 5542
Q ss_pred --HhcCCCCeEEEcCCCccchHHHHHHhc-----cc-----CCcEEEeeCCC----C-------------HHHHHhhcC-
Q psy12791 92 --HLLSAGDHIISGDDVYGGTYRYFAQVA-----PK-----IGLEVDFVDLR----K-------------IENLIKYIK- 141 (393)
Q Consensus 92 --~~~~~gd~vl~~~~~y~~~~~~~~~~~-----~~-----~g~~v~~~~~~----d-------------~~~l~~~l~- 141 (393)
.....+..|+.....|++.....-.+. +. ....+..+|.. + .+.++..+.
T Consensus 136 iAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~ 215 (447)
T COG0160 136 IARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFD 215 (447)
T ss_pred HHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHh
Confidence 233445678888888876432211111 11 11225555543 1 223444232
Q ss_pred -----CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccc------ccCCCCCcCcEEEEccccc
Q psy12791 142 -----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAY------YQKSLPWGVDIVLYSLTKY 206 (393)
Q Consensus 142 -----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~------~~~~~~~~~di~~~S~sK~ 206 (393)
.++.+++++..+...|.+.+ ++++.++|++| |+++|+||+|..+- .........||++ ++|.
T Consensus 216 ~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~-gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt--~aK~ 292 (447)
T COG0160 216 LEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREH-GILLIADEVQTGFGRTGKMFAFEHFGVEPDIVT--LAKS 292 (447)
T ss_pred hcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccccchhhhhcCCCCCEEE--eccc
Confidence 24789999999999999997 88999999999 99999999998731 1112223578885 7799
Q ss_pred ccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhhCCCcceEeC
Q psy12791 207 MNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLESHPCVKGVLH 284 (393)
Q Consensus 207 ~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~v~~ 284 (393)
++ - |+.+|.++.+ +++.+ ...-........+|..++.+...++.+++ ..++..+.-+++.+.|.++.. .+
T Consensus 293 ig-~-G~Pl~avv~r-~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~----~~ 364 (447)
T COG0160 293 LG-G-GLPLSAVVGR-AEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQE----KH 364 (447)
T ss_pred cc-C-CCceeEEecc-HHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHh----hc
Confidence 95 3 8889999998 77776 32211111233466666666665554332 233333333444444433211 11
Q ss_pred CCCCCCcchHHHhhhcCCCcceEEEEEc-------CCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhH
Q psy12791 285 PGLPSHPNHELAKSQWSGTSGMLSFYVN-------GGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETR 357 (393)
Q Consensus 285 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~ 357 (393)
| .+-+.+|.|.|+-+++. .+.+..+++++++...++.+..+
T Consensus 365 ~----------~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~---------------------- 412 (447)
T COG0160 365 P----------LIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTC---------------------- 412 (447)
T ss_pred C----------ceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEecc----------------------
Confidence 1 12233667788888875 23467777777766555433222
Q ss_pred hhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 358 DALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 358 ~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
|...+.|||..-..-++++++...++|.+.
T Consensus 413 ---G~~~nviRi~PPL~is~e~~d~~l~il~~a 442 (447)
T COG0160 413 ---GPHGNVLRILPPLTISDEELDEGLDILEEA 442 (447)
T ss_pred ---CCCCcEEEEeCCcccCHHHHHHHHHHHHHH
Confidence 222678898887777777777776666644
No 306
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.56 E-value=9.7e-13 Score=132.90 Aligned_cols=164 Identities=18% Similarity=0.166 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHhCCCcE-EEeccHHHH-HHHHHHh----cC----CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 61 RRNLERCIASLEEAKHG-LCYSSGLGA-VTAVTHL----LS----AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 61 ~~~lr~~la~~~~~~~~-i~~~~G~~a-l~~~~~~----~~----~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
..++++.++++.|.+.. +.-++|+.+ +..++++ .. ..++|+++.-.|+++ ...+...|++++.++.
T Consensus 545 i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtN----pasa~~~GieVv~Vp~ 620 (954)
T PRK12566 545 IDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTN----PASAQMAGMRVVIVEC 620 (954)
T ss_pred HHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccC----HHHHHHCCCEEEEecc
Confidence 46789999999999854 444577776 3333332 21 235788988888653 2336678999999988
Q ss_pred C-----CHHHHHhhcC---CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccc--cCCCCCcCcEEE
Q psy12791 131 R-----KIENLIKYIK---PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYY--QKSLPWGVDIVL 200 (393)
Q Consensus 131 ~-----d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~--~~~~~~~~di~~ 200 (393)
+ |+++|++.++ +++++|.+++|++-.+...++++|.++++++ |+++++|.++..... ..|.+.|+|+++
T Consensus 621 D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~-Galv~vDgA~~~a~~~l~~Pg~~GADi~~ 699 (954)
T PRK12566 621 DPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQH-GGQVYMDGANLNAQVGLARPADIGADVSH 699 (954)
T ss_pred CCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHc-CCEEEEEeeChhhccCCCChhhcCCCEEE
Confidence 5 8999999987 5788889999998887777799999999999 999999999975332 234568999999
Q ss_pred EcccccccCCCC---ceEEEEEecChHHHHHHH
Q psy12791 201 YSLTKYMNGHSD---VVMGATVTNDDSLQARLK 230 (393)
Q Consensus 201 ~S~sK~~~G~~G---~r~G~~~~~~~~~~~~~~ 230 (393)
++++|+|++|.| .-+|.+.+. +.+...++
T Consensus 700 ~s~HKtf~~P~G~GGP~vG~iav~-~~L~pfLp 731 (954)
T PRK12566 700 MNLHKTFCIPHGGGGPGMGPIGVR-AHLAPFVA 731 (954)
T ss_pred ecCCcccCcCccCCCCccchhhhh-hhhhhhcc
Confidence 999999964433 224554544 44444444
No 307
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.56 E-value=6.1e-13 Score=123.85 Aligned_cols=240 Identities=19% Similarity=0.170 Sum_probs=144.4
Q ss_pred HHHHHHHHhCCC----c-EEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHH-HHHhc-----ccCCcEEEeeCCC
Q psy12791 64 LERCIASLEEAK----H-GLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRY-FAQVA-----PKIGLEVDFVDLR 131 (393)
Q Consensus 64 lr~~la~~~~~~----~-~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~-~~~~~-----~~~g~~v~~~~~~ 131 (393)
.++.+.++++++ . .+=.-||+.|. .++.++++|||+|+..+..+++.... +..-. .....+++.++++
T Consensus 71 a~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d 150 (399)
T PF00464_consen 71 AIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVD 150 (399)
T ss_dssp HHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-
T ss_pred HHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeee
Confidence 445566688887 4 66678999996 88889999999999988877542100 00000 1112456565544
Q ss_pred ------CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcc-----cccCCCCCcCcEE
Q psy12791 132 ------KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTA-----YYQKSLPWGVDIV 199 (393)
Q Consensus 132 ------d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~-----~~~~~~~~~~di~ 199 (393)
|.+++++.+.+ ++++|++..-+.| ..+|.+++.++|++. |++|++|.++..+ .+.+|+.. +|++
T Consensus 151 ~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~--~~~d~~~~reIad~v-ga~l~~D~sH~~GLIa~g~~~~P~~~-ADvv 226 (399)
T PF00464_consen 151 PDTGLIDYDELEKLAKEHKPKLIICGASSYP--RPIDFKRFREIADEV-GAYLMADISHIAGLIAGGLFPNPFPY-ADVV 226 (399)
T ss_dssp TTTSSB-HHHHHHHHHHH--SEEEEE-SSTS--S---HHHHHHHHHHT-T-EEEEE-TTTHHHHHTTSS--GCCT-SSEE
T ss_pred cCCCeECHHHHHHHHhhcCCCEEEECchhcc--CccCHHHHHHHHHhc-CcEEEecccccccceehheecCcccc-ceEE
Confidence 78888887654 6899999766655 467899999999999 9999999999874 44577776 9999
Q ss_pred EEcccccccCCCCceEEEEEec-------------ChHHHHHHHHHHHhc--CCCCCHHHHHHH---HhccC-CHHHHHH
Q psy12791 200 LYSLTKYMNGHSDVVMGATVTN-------------DDSLQARLKFLQNSM--GVVPSPFDCWLV---TRGLK-TLPCRLK 260 (393)
Q Consensus 200 ~~S~sK~~~G~~G~r~G~~~~~-------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~-~~~~~~~ 260 (393)
++|.||.|.|| |.|.++++ ++++.+++.....+. ++.....-+.++ ..... ......+
T Consensus 227 t~sThKtl~GP---rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~ 303 (399)
T PF00464_consen 227 TGSTHKTLRGP---RGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAK 303 (399)
T ss_dssp EEESSGGG-SS---S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred Eeecccccccc---CceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHH
Confidence 99999999766 68999998 578988887554322 111111111111 11122 2456777
Q ss_pred HHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC---CHHHHHHHHHhcCc
Q psy12791 261 EHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG---GAEETRIFLESLLI 327 (393)
Q Consensus 261 ~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~ 327 (393)
+..+|++.|++.|.+... . +.. +. .-..++++.+.. +..+++..+++..+
T Consensus 304 qVv~NAk~La~~L~~~G~-~-v~~-gg--------------Td~H~vlvd~~~~~~~g~~a~~~Le~~gI 356 (399)
T PF00464_consen 304 QVVKNAKALAEALQERGF-K-VVT-GG--------------TDNHQVLVDLRSFGIDGKEAEKALEEAGI 356 (399)
T ss_dssp HHHHHHHHHHHHHHHTT--E-EGG-GS---------------SSSEEEEEGGGGTS-HHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHhhCCc-E-EEE-CC--------------CCCCeEEEEecccccchHHHHHHHHhcCe
Confidence 888999999999987532 1 211 10 113567887742 44677777777665
No 308
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.54 E-value=5.3e-12 Score=113.44 Aligned_cols=250 Identities=15% Similarity=0.126 Sum_probs=160.9
Q ss_pred CCchHHHHHHHHHHH-hCCC---------cEEEeccHHHHH-HHH--HHhcCCCCeEEEcCCCccchHHHHHHhcccCCc
Q psy12791 57 NNPTRRNLERCIASL-EEAK---------HGLCYSSGLGAV-TAV--THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL 123 (393)
Q Consensus 57 ~~~~~~~lr~~la~~-~~~~---------~~i~~~~G~~al-~~~--~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~ 123 (393)
|-.+.....+.++++ +|.+ ..+-..+|+-|+ .+. .+...+...|.+++|+|+. +..++...|.
T Consensus 67 ~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~N----H~~If~~aGl 142 (396)
T COG1448 67 PIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPN----HKAIFEAAGL 142 (396)
T ss_pred CcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHh----HHHHHHhcCC
Confidence 345677788888886 4532 245567777787 332 3334566779999999984 6777888999
Q ss_pred EEEeeCCC-------CHHHHHhhcCC--CCcEEEE-ecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC
Q psy12791 124 EVDFVDLR-------KIENLIKYIKP--NTKMVWI-ENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK 190 (393)
Q Consensus 124 ~v~~~~~~-------d~~~l~~~l~~--~~~~v~l-~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~ 190 (393)
++..+|.- |.+.+.+.+.. ...+|++ ...|||||.-++ +++|.++.++. +.+.++|-||..+-...
T Consensus 143 ~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r-~lip~~D~AYQGF~~Gl 221 (396)
T COG1448 143 EVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER-GLIPFFDIAYQGFADGL 221 (396)
T ss_pred ceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc-CCeeeeehhhhhhccch
Confidence 99988863 56666665542 3345555 577999999997 77899999999 99999999998754321
Q ss_pred CCC---------Cc-CcEEEEcccccccCCCCceEEEEE--ecChHHHHHH----HHHHHhcCCCCCHHHHHHHHhccC-
Q psy12791 191 SLP---------WG-VDIVLYSLTKYMNGHSDVVMGATV--TNDDSLQARL----KFLQNSMGVVPSPFDCWLVTRGLK- 253 (393)
Q Consensus 191 ~~~---------~~-~di~~~S~sK~~~G~~G~r~G~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~- 253 (393)
..+ .+ --+|+.|+||.| |+=|-|+|++. +.+.+...++ +.......+++....+......+.
T Consensus 222 eeDa~~lR~~a~~~~~~lva~S~SKnf-gLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~ 300 (396)
T COG1448 222 EEDAYALRLFAEVGPELLVASSFSKNF-GLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNN 300 (396)
T ss_pred HHHHHHHHHHHHhCCcEEEEehhhhhh-hhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCC
Confidence 111 11 258999999999 69999999854 4555555544 333333444444444444333332
Q ss_pred ---------CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHh
Q psy12791 254 ---------TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLES 324 (393)
Q Consensus 254 ---------~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (393)
.+...++++.+.+..+.+.|+.+..-..+. .+ ....||++++= -++++++++.++
T Consensus 301 p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~-----------~i----~~Q~GMFsy~G-ls~~QV~rLree 364 (396)
T COG1448 301 PELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFD-----------FI----ISQRGMFSYTG-LSPEQVDRLREE 364 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccc-----------hH----hhcCceeecCC-CCHHHHHHHHHh
Confidence 233455555566666666666421111010 00 11247777762 289999999998
Q ss_pred cCcc
Q psy12791 325 LLIF 328 (393)
Q Consensus 325 l~~~ 328 (393)
..+.
T Consensus 365 ~~IY 368 (396)
T COG1448 365 FGIY 368 (396)
T ss_pred ccEE
Confidence 7764
No 309
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.54 E-value=1.1e-12 Score=129.98 Aligned_cols=157 Identities=15% Similarity=0.154 Sum_probs=122.2
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
++....+.++.+|+.+|++...+++||++. + .++.+++.+||.|++++.+|-+.+ ..++...|+..+++...
T Consensus 172 ~eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~---hgaLiLsGa~PVYl~P~~n~ 248 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNH---HGALIQAGATPVYLETARNP 248 (720)
T ss_pred CChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHH---HHHHHHcCCeEEEeeccccc
Confidence 345678889999999999999999999886 7 788889999999999999998743 22356789999988642
Q ss_pred -------C-----HHHHHhhcCCC----------CcEEEEecCCCCcccccCHHHHHHH-HHhCCCcEEEEeCccCcccc
Q psy12791 132 -------K-----IENLIKYIKPN----------TKMVWIENPTNPLMTVFDVKAISAV-VKQHPDILLVLDNTFLTAYY 188 (393)
Q Consensus 132 -------d-----~~~l~~~l~~~----------~~~v~l~~p~nptG~~~~~~~l~~l-~~~~~~~~livDea~~~~~~ 188 (393)
+ .+.+++++.+. .+++++++|+. -|.+.++++|.++ ++.+ + +|++|||++....
T Consensus 249 ~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~-~-~llvDEAhgah~~ 325 (720)
T PRK13578 249 FGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLC-D-YILFDSAWVGYEQ 325 (720)
T ss_pred cCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccC-C-cEEEeCcchhhhc
Confidence 2 34477766533 58999999984 5999999999998 6777 7 9999999987432
Q ss_pred cCC---------CCCcCc----EEEEcccccccCCCCceEEEEEec
Q psy12791 189 QKS---------LPWGVD----IVLYSLTKYMNGHSDVVMGATVTN 221 (393)
Q Consensus 189 ~~~---------~~~~~d----i~~~S~sK~~~G~~G~r~G~~~~~ 221 (393)
..+ +..|+| +++.|.||.++|+.. ..++-.+
T Consensus 326 F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQ--aS~LHvk 369 (720)
T PRK13578 326 FIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQ--TSQIHKK 369 (720)
T ss_pred cCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhh--HhhhhcC
Confidence 222 235788 999999999866654 5555444
No 310
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.53 E-value=5e-12 Score=122.05 Aligned_cols=285 Identities=15% Similarity=0.140 Sum_probs=162.1
Q ss_pred CCCchHHHHHHHHHHHhCCC----cEEEe-ccHHHHH-HHHH--HhcCCCCeEEEcCCCccchHHHHHHhccc----CC-
Q psy12791 56 SNNPTRRNLERCIASLEEAK----HGLCY-SSGLGAV-TAVT--HLLSAGDHIISGDDVYGGTYRYFAQVAPK----IG- 122 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~----~~i~~-~~G~~al-~~~~--~~~~~gd~vl~~~~~y~~~~~~~~~~~~~----~g- 122 (393)
++++...+|.++|++..... ..+++ +||++|. .++. .......+|+.....|++........... .+
T Consensus 79 ~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~ 158 (442)
T TIGR00709 79 LTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAV 158 (442)
T ss_pred cCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccC
Confidence 45677788889998876432 33454 7999987 4443 22233457888888887754332222110 00
Q ss_pred ----cEEEeeCCCC-------------H----HHHHhhcC------CCCcEEEEecCCCCcccccC----HHHHHHHHHh
Q psy12791 123 ----LEVDFVDLRK-------------I----ENLIKYIK------PNTKMVWIENPTNPLMTVFD----VKAISAVVKQ 171 (393)
Q Consensus 123 ----~~v~~~~~~d-------------~----~~l~~~l~------~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~ 171 (393)
..+..++..+ . +.+++.+. +++.+|+++..++..|.+.+ +++|.++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~ 238 (442)
T TIGR00709 159 GMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRK 238 (442)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 1123333221 0 11223331 35788888888777787754 8899999999
Q ss_pred CCCcEEEEeCccCcccc-cC-----CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHH
Q psy12791 172 HPDILLVLDNTFLTAYY-QK-----SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDC 245 (393)
Q Consensus 172 ~~~~~livDea~~~~~~-~~-----~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (393)
+ |+++|.||++..+.. .. ......|+++ ++|.++ . |+++|+++++ +++ +.+...........++..+
T Consensus 239 ~-g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~-~-G~Pigav~~~-~~~-~~~~~~~~~~T~~gnpla~ 311 (442)
T TIGR00709 239 H-DIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVG-G-GLPLAVLLIA-PEF-DAWQPAGHTGTFRGNQLAM 311 (442)
T ss_pred c-CCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--Eccccc-C-CcccEEEEEc-hHH-hccCCCcCCCCCCcCHHHH
Confidence 9 999999999986421 11 1223468887 789995 3 7999999997 553 4332111111223466666
Q ss_pred HHHHhccCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH----
Q psy12791 246 WLVTRGLKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA---- 315 (393)
Q Consensus 246 ~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 315 (393)
..+...++.+.+ ..++..+....+.+.|++ ++.+. +.+|.|.++.+.+..+.
T Consensus 312 aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~------------------~vrG~Gl~~~ie~~~~~~~~~ 373 (442)
T TIGR00709 312 VTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIG------------------NVRGRGLMQGIMIVDERQSKD 373 (442)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCee------------------eeeccceEEEEEEccCccccc
Confidence 666665544321 233333444444444443 22222 23566788888874211
Q ss_pred ---------HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHH
Q psy12791 316 ---------EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQA 386 (393)
Q Consensus 316 ---------~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a 386 (393)
+....+...+...++-+... +...+.||+.+.+..++++++.+.++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-------------------------~~~~~~l~~~Ppl~it~~ei~~~~~~ 428 (442)
T TIGR00709 374 ATGAYPRDCELAAAIQGACFENGLLLETG-------------------------GREGEVFRLLCPITIDQEECEEGISR 428 (442)
T ss_pred ccccCCcchHHHHHHHHHHHHCCeEEeec-------------------------CCCCCEEEEECCCCCCHHHHHHHHHH
Confidence 12334444433323222110 11146889999888888888777766
Q ss_pred HHHh
Q psy12791 387 LRKA 390 (393)
Q Consensus 387 l~~~ 390 (393)
+++.
T Consensus 429 l~~~ 432 (442)
T TIGR00709 429 FKQA 432 (442)
T ss_pred HHHH
Confidence 6543
No 311
>KOG1357|consensus
Probab=99.52 E-value=9.5e-14 Score=126.20 Aligned_cols=284 Identities=16% Similarity=0.176 Sum_probs=186.1
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLI 137 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~ 137 (393)
....++++..|+++|.+++++++.|-... ..+..++.+|.-|+.....|.+ +..-++.-|+.++.+..+|.++|+
T Consensus 182 ~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaS----i~~GaRLSgAtiRVfkHNdm~~LE 257 (519)
T KOG1357|consen 182 EEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHAS----LITGARLSGATTRVFRHNDMQGLE 257 (519)
T ss_pred HHHHHHHHHHHHhcCCcceEEEeccccccccCcceeecCCcceeeccccchh----eeccccccCceEEEEecCCHHHHH
Confidence 45678999999999999999999996665 5667788999888887777764 566788999999999999988888
Q ss_pred hhcCC-------CC-----c-EEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC----------CCCC
Q psy12791 138 KYIKP-------NT-----K-MVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK----------SLPW 194 (393)
Q Consensus 138 ~~l~~-------~~-----~-~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~----------~~~~ 194 (393)
+.+.+ +| + +|+++.....-|.+.++.++.++.+++ .++++.||+++.+.... ....
T Consensus 258 r~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkky-kayl~lDEAHSiGA~g~tGrgvce~~g~d~~ 336 (519)
T KOG1357|consen 258 RLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKY-KAYLYLDEAHSIGAMGATGRGVCEYFGVDPE 336 (519)
T ss_pred HHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccc-cEEEEeeccccccccCCCCcceeeccCCCch
Confidence 87742 22 3 455578888889999999999999999 99999999999754311 1123
Q ss_pred cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH--hcCCCCCHHHHHHHHhccC---------CHHHHHHHHH
Q psy12791 195 GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN--SMGVVPSPFDCWLVTRGLK---------TLPCRLKEHE 263 (393)
Q Consensus 195 ~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 263 (393)
..||.+++|+|+++ .. +||+.++ +++++.++.... ..+...++..+.....+++ ...++.+++.
T Consensus 337 dvDImMGtftKSfg-a~---GGyiags-k~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~ 411 (519)
T KOG1357|consen 337 DVDIMMGTFTKSFG-AA---GGYIAGS-KELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLA 411 (519)
T ss_pred hheeecceehhhcc-cc---cceecCc-HHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHH
Confidence 57899999999994 32 7888887 888887754332 2344444444333333222 2344666677
Q ss_pred HHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccC
Q psy12791 264 RGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADL 343 (393)
Q Consensus 264 ~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~ 343 (393)
+|...++..|+....+ .+-. . -+.++-+-+- .+..+..|-+.+....+++...+. .+.
T Consensus 412 ~ns~yfr~~l~~~gfi---vyG~-~--------------dSpVvplll~-~~~k~~~f~r~~l~~nigvVvvgf---Pat 469 (519)
T KOG1357|consen 412 ENSRYFRWELQKMGFI---VYGN-N--------------DSPVVPLLLY-GPAKIVAFSREMLERNIGVVVVGF---PAT 469 (519)
T ss_pred hhhHHHHHhhhcCcEE---EecC-C--------------CCCcceeeec-CcccccHHHHHHHhcCceEEEEeC---CCc
Confidence 7777776666543221 1110 0 1233333331 222333333333222222221111 000
Q ss_pred cccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 344 PAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
| .-++.+|++.+..++.|.++.+.++...+.
T Consensus 470 p-----------------l~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 470 P-----------------LLESRARFCLSASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred h-----------------HHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence 1 115778999999999888888887776543
No 312
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.52 E-value=2e-12 Score=120.86 Aligned_cols=278 Identities=14% Similarity=0.086 Sum_probs=177.6
Q ss_pred chHHHHHHHHHHHhCCC---cEEE-eccHHHHH-HHHHHhc-CCCCeEEEcCCCccchHHHHH-HhcccCCc-EEEeeCC
Q psy12791 59 PTRRNLERCIASLEEAK---HGLC-YSSGLGAV-TAVTHLL-SAGDHIISGDDVYGGTYRYFA-QVAPKIGL-EVDFVDL 130 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~---~~i~-~~~G~~al-~~~~~~~-~~gd~vl~~~~~y~~~~~~~~-~~~~~~g~-~v~~~~~ 130 (393)
....++++.|.++++.+ +.++ .+||+.++ .++..++ ++|++|++.. .|+. .+. .+++.+|+ ++..+..
T Consensus 39 ~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~---r~~~eia~~~g~~~v~~l~~ 114 (374)
T TIGR01365 39 EKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGK---GWVTDVTKQLKLPDVRVLEA 114 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHH---HHHHHHHHhcCCCCcEEEcC
Confidence 45667788888899874 2344 45666678 7788888 5888888754 5543 234 77888898 4666654
Q ss_pred C-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccc
Q psy12791 131 R-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTK 205 (393)
Q Consensus 131 ~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK 205 (393)
+ ++++++. + +.|+++|.-..||+..|++++.... + ++++|+|.+.+.+.....++ +.|+++.|..|
T Consensus 115 ~~g~~~~~~~ve~----~-~~v~~vhnETSTGv~npv~~i~~~~--~-~~lliVDavSs~g~~~l~~d-~iDv~~tgsQK 185 (374)
T TIGR01365 115 EYGKLPDLKKVDF----K-NDVVFTWNGTTSGVRVPNGDFIPAD--R-EGLTICDATSAAFAQDLDYH-KLDVVTFSWQK 185 (374)
T ss_pred CCCCCCCHHHcCC----C-CCEEEecCCCchheecccccccccc--C-CCcEEEEccchhcCCCCChh-HCcEEEEechh
Confidence 3 6777752 1 2367899999999999987665322 5 89999999988665433333 58999999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHH------H--------------hcCCCC-C-HHH-HHHHHhcc------CCHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQ------N--------------SMGVVP-S-PFD-CWLVTRGL------KTLP 256 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~------~--------------~~~~~~-~-~~~-~~~~~~~~------~~~~ 256 (393)
+++++|| +++++.+ ++.+++.+... . ..+... . +.. .+.+...+ ..++
T Consensus 186 ~L~~ppG--ls~v~vs-~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle 262 (374)
T TIGR01365 186 VLGGEGA--HGMLILS-PRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLK 262 (374)
T ss_pred ccCCCCc--eEEEEEC-HHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHH
Confidence 9999999 9999998 66666554211 0 001111 1 111 11222222 2477
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcceEeC-CCCCCCcchHHHhhhcCCCcceEEEEEcCCHH-----H-----HHHHHHhc
Q psy12791 257 CRLKEHERGSIEVAKFLESHPCVKGVLH-PGLPSHPNHELAKSQWSGTSGMLSFYVNGGAE-----E-----TRIFLESL 325 (393)
Q Consensus 257 ~~~~~~~~~~~~l~~~l~~~~~~~~v~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~l 325 (393)
.+.+++.++++.+.++++..+....+.. +.. + ...++.+.++.... + ...+.+.+
T Consensus 263 ~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~-------------r-S~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l 328 (374)
T TIGR01365 263 PLIARADDNLAVLEAFVAKNNWIHFLAETPEI-------------R-SNTSVCLKVVDPAIDALDEDAQADFAKELISTL 328 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcccCCCChhh-------------c-CCCeEEEEeCCccccccccchhhHHHHHHHHHH
Confidence 8889999999999999998653221110 110 0 12345666632110 2 45677777
Q ss_pred CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 326 LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 326 ~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
+..++.+..|... ..+..+||.-.-+-+.++++.+..+|.=
T Consensus 329 ~~~gi~i~~G~~~-----------------------~~~~~fRIg~~G~i~~~di~~l~~~l~~ 369 (374)
T TIGR01365 329 EKEGVAYDIGSYR-----------------------DAPSGLRIWCGATVEKSDLECLCPWLDW 369 (374)
T ss_pred HHCCEEEeccccc-----------------------cCCCceEEecCCcCCHHHHHHHHHHHHH
Confidence 6555554433210 1146899998877788888898888863
No 313
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.52 E-value=1.8e-12 Score=113.37 Aligned_cols=159 Identities=19% Similarity=0.236 Sum_probs=121.9
Q ss_pred HHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhc--CCCCeEEEcCC-CccchHHHHHHhcccCCcEEEeeCCCCHHH
Q psy12791 62 RNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLL--SAGDHIISGDD-VYGGTYRYFAQVAPKIGLEVDFVDLRKIEN 135 (393)
Q Consensus 62 ~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~--~~gd~vl~~~~-~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~ 135 (393)
+.|-.+||-++|+. .+++++.+++. + ..+.+.+ .+|+.||+++- +|++-.......++..+.....--.+.+++
T Consensus 79 ~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~~ 158 (407)
T COG3844 79 ERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPRA 158 (407)
T ss_pred hHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeChHH
Confidence 45778888899986 68888888887 6 5555543 45888888765 555544455566666664411111236789
Q ss_pred HHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCC-CcCcEEEEcccccccCCCCce
Q psy12791 136 LIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLP-WGVDIVLYSLTKYMNGHSDVV 214 (393)
Q Consensus 136 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~-~~~di~~~S~sK~~~G~~G~r 214 (393)
+++++++++.+|++++.|.-||...++.+|-.+++++ |++++.|-+++.+.....+. .|+|+-+++..|+++|-||-.
T Consensus 159 ~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~-galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGap 237 (407)
T COG3844 159 LEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQH-GALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAP 237 (407)
T ss_pred HHHhhccceEEEEeccccccccceeeHHHHHHHHHhc-CceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCc
Confidence 9999999999999999999999999999999999999 99999999999877644443 589999999999999888865
Q ss_pred EEEEEec
Q psy12791 215 MGATVTN 221 (393)
Q Consensus 215 ~G~~~~~ 221 (393)
.|..+.+
T Consensus 238 a~l~v~~ 244 (407)
T COG3844 238 AGLFVAP 244 (407)
T ss_pred eeEEecc
Confidence 5555543
No 314
>KOG0258|consensus
Probab=99.52 E-value=8.1e-13 Score=118.08 Aligned_cols=218 Identities=14% Similarity=0.135 Sum_probs=145.4
Q ss_pred CchHHHHHHHHHHHhC----C---CcEEEeccHHHH-HHHHHH-h-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 58 NPTRRNLERCIASLEE----A---KHGLCYSSGLGA-VTAVTH-L-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~----~---~~~i~~~~G~~a-l~~~~~-~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
..+.+-+|+.+|+++. . ++.|++|+|++. +..++. + ..+.+-|++|-|.|+ .|......+|...+.
T Consensus 112 SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYP----LYsAti~l~~~~~v~ 187 (475)
T KOG0258|consen 112 SQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYP----LYSATISLLGGTQVP 187 (475)
T ss_pred ccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCc----hhHHHHHHhCCcccc
Confidence 4567778999998863 2 268999999875 644444 3 346788999999998 677777788888776
Q ss_pred eCCC-------CHHHHHhhcCC-----CCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccCC-
Q psy12791 128 VDLR-------KIENLIKYIKP-----NTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQKS- 191 (393)
Q Consensus 128 ~~~~-------d~~~l~~~l~~-----~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~~- 191 (393)
+-++ |.+++++.+++ +++++++.||.||||.++. +++|..+|.+. ++.|+-||+|.+.++...
T Consensus 188 YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~-~l~llaDEVYQ~Nvy~~~s 266 (475)
T KOG0258|consen 188 YYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEE-GLVLLADEVYQDNVYTTGS 266 (475)
T ss_pred eeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHc-CeEEechHHHHhhccCCCc
Confidence 6554 67777776642 5789999999999999997 77888889999 999999999998554321
Q ss_pred -C----------C-CcC----cEEEEcccccccCCCCceEEEEEe--cChHHHHHHHHHHHhcC--------------CC
Q psy12791 192 -L----------P-WGV----DIVLYSLTKYMNGHSDVVMGATVT--NDDSLQARLKFLQNSMG--------------VV 239 (393)
Q Consensus 192 -~----------~-~~~----di~~~S~sK~~~G~~G~r~G~~~~--~~~~~~~~~~~~~~~~~--------------~~ 239 (393)
+ . ... .+..+|.||.+.|-.|.|+||+-. .+++..+.+.+....-- ..
T Consensus 267 kFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnP 346 (475)
T KOG0258|consen 267 KFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNP 346 (475)
T ss_pred chHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCC
Confidence 0 0 111 367788899998999999999653 33555554443322110 01
Q ss_pred CCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcce
Q psy12791 240 PSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKG 281 (393)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 281 (393)
+.|.+.-+.+-. ..-....+.+.+++..+.+.+++.+++.+
T Consensus 347 P~Pgd~Sy~~~~-~Ekd~il~~l~~ra~l~~~~~ns~~gi~c 387 (475)
T KOG0258|consen 347 PKPGDPSYDLFS-SEKDGILSSLRSRAKLTEDAFNSLEGISC 387 (475)
T ss_pred CCCCCcchhhhh-hhhHhHHHHHHHHhHHHHHHHhhcCceee
Confidence 111111110000 11122345555666777888888877654
No 315
>KOG1358|consensus
Probab=99.51 E-value=3.7e-13 Score=120.29 Aligned_cols=293 Identities=16% Similarity=0.194 Sum_probs=182.9
Q ss_pred hHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHh
Q psy12791 60 TRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIK 138 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~ 138 (393)
..-.|++.||+++|.++.|+.+.|-+++ .++.++.+.||.+++..-... ..+..++...-.+.++..+|.++++.
T Consensus 140 vHldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nf----aIq~GlqlSRS~i~~Fkhndm~~ler 215 (467)
T KOG1358|consen 140 VHLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNF----AIQKGLQLSRSTISYFKHNDMEDLER 215 (467)
T ss_pred eecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCcEEEEehhhhH----HHHHHHhhhhheeEEecCCCHHHHHH
Confidence 3457999999999999999999999998 899999999999888765544 35555555556788888888888887
Q ss_pred hcCCCC-------------cEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC---C------CC-Cc
Q psy12791 139 YIKPNT-------------KMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK---S------LP-WG 195 (393)
Q Consensus 139 ~l~~~~-------------~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~---~------~~-~~ 195 (393)
.+.+.+ +.|+++..--+||.++|+.+|.++..+| ..-+++||+++.+.... . .+ -.
T Consensus 216 ll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Ky-k~RvildEs~SfG~lg~~GrGvteH~~v~~~~ 294 (467)
T KOG1358|consen 216 LLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKY-KFRVILDESLSFGVLGKTGRGVTEHFGVPITD 294 (467)
T ss_pred hccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhh-eEEEEEecccccccccccCccccccCCCCccc
Confidence 775433 4677788888999999999999999999 99999999999865432 1 11 24
Q ss_pred CcEEEEcccccccCCCCceEEEEEecChHH--HHHHHHHHHhcCCCCCHHHHHHHHhccC---CHHHHHHHHHHHHHHHH
Q psy12791 196 VDIVLYSLTKYMNGHSDVVMGATVTNDDSL--QARLKFLQNSMGVVPSPFDCWLVTRGLK---TLPCRLKEHERGSIEVA 270 (393)
Q Consensus 196 ~di~~~S~sK~~~G~~G~r~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~ 270 (393)
.|++++|+.-.+++. +|+++++ .-+ .+++......+.+...+..+..+...+. ..+..++.+.+....+.
T Consensus 295 iDiv~~sm~~alas~----GgFc~G~-~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H 369 (467)
T KOG1358|consen 295 IDIVTASMETALASG----GGFCAGK-SFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFH 369 (467)
T ss_pred eeeeeeccccccccc----Cceeecc-eeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccc
Confidence 689999999888522 6777764 322 2334333344444444444333332221 11122223333333333
Q ss_pred HHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc---CCHHHHHHHHHhcCccccccccCCccccccCcccc
Q psy12791 271 KFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN---GGAEETRIFLESLLIFRCAESLGGIESLADLPAEM 347 (393)
Q Consensus 271 ~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~ 347 (393)
..|....+..-. + ..-++++-+.+. ++.++-..+++.+-...+.- +. ..+
T Consensus 370 ~~l~~~s~~~v~---~--------------~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~---~~-------ll~ 422 (467)
T KOG1358|consen 370 AALSSNSGFIVS---G--------------SPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAE---GV-------LLT 422 (467)
T ss_pred hhhhcCCceEEe---c--------------CcCCceeeeeecccccchHHHHHHHHHHHHHHHhh---cc-------eeh
Confidence 334332221111 1 112455666554 24566666666653222111 00 000
Q ss_pred cCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 348 THKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 348 ~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
...++...+. . .-+..||+.+....++++++++.+.+++.+.
T Consensus 423 ~a~~~~~~e~--~-~~~pSiri~~~a~~seeel~ra~~~ik~~~~ 464 (467)
T KOG1358|consen 423 RAKYLEKLER--C-PIPPSIRICVSAGMSEEELERAAELIKEVAS 464 (467)
T ss_pred hhhhhhhccc--C-CCCCcEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 0001100000 0 1145899999999999999999999987653
No 316
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.50 E-value=1.7e-11 Score=118.34 Aligned_cols=283 Identities=15% Similarity=0.117 Sum_probs=166.3
Q ss_pred CchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHH--HhcCCCCeEEEcCCCccchHHHHHHhcc-----cCC-----
Q psy12791 58 NPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVT--HLLSAGDHIISGDDVYGGTYRYFAQVAP-----KIG----- 122 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~--~~~~~gd~vl~~~~~y~~~~~~~~~~~~-----~~g----- 122 (393)
.+...+|.+.|++.... +...+.+||++|+ .++. .......+|+.-...|++.......+.. ..+
T Consensus 95 ~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 174 (457)
T PRK05639 95 SERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLM 174 (457)
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCC
Confidence 46667888899887654 3577788899987 4442 2233345788878888774422211111 111
Q ss_pred cEEEeeCCCC-------------H--------HHHHhhc------CCCCcEEEEecCCCCcccccC----HHHHHHHHHh
Q psy12791 123 LEVDFVDLRK-------------I--------ENLIKYI------KPNTKMVWIENPTNPLMTVFD----VKAISAVVKQ 171 (393)
Q Consensus 123 ~~v~~~~~~d-------------~--------~~l~~~l------~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~ 171 (393)
-.+..+|..+ . +.+++.+ .+++.+|+++..+...|.+.| +++|.++|++
T Consensus 175 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~ 254 (457)
T PRK05639 175 PNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDE 254 (457)
T ss_pred CCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 1233444321 1 2344433 245889999988888888776 8999999999
Q ss_pred CCCcEEEEeCccCccc-c-----cCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHH
Q psy12791 172 HPDILLVLDNTFLTAY-Y-----QKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDC 245 (393)
Q Consensus 172 ~~~~~livDea~~~~~-~-----~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (393)
+ |+++|+||++..+- . ........|+++ ++|.++| |+.+|+++++ +++.+.... ........+|..+
T Consensus 255 ~-g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~g--G~pi~av~~~-~~i~~~~~~-~~~~T~~g~p~~~ 327 (457)
T PRK05639 255 H-GILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVAS--GMGLSGVIGR-KELMDLTSG-SALLTPAANPVIS 327 (457)
T ss_pred c-CCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcC--CCcceeEEeh-HHHHhhcCC-CcccCCCcCHHHH
Confidence 9 99999999988521 1 111223578887 7899952 4568999987 777762211 1111223456666
Q ss_pred HHHHhccCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-----C
Q psy12791 246 WLVTRGLKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-----G 314 (393)
Q Consensus 246 ~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 314 (393)
..+...++.+.. ..++..+..+.+.+.|++ ++.+. +.+|.|.++.+++.. +
T Consensus 328 aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~------------------~VrG~Gl~~gve~~~~~~~~~ 389 (457)
T PRK05639 328 AAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIG------------------DVRGKGLMIGVEIVKENGKPD 389 (457)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEE------------------eeccceeEEEEEEecCCCCCC
Confidence 666555544322 223333344445554443 22221 235667788887732 2
Q ss_pred HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 315 AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.+....+.+.+...++-+... |...+.||+++.+..++++++.+.++|++.
T Consensus 390 ~~~~~~~~~~~~~~Gv~~~~~-------------------------g~~~~~lr~~Ppl~it~~~id~~~~~l~~~ 440 (457)
T PRK05639 390 PELTGKICWRAFELGLILPSY-------------------------GMFGNVIRITPPLVITKEIAEKGLEIMERA 440 (457)
T ss_pred HHHHHHHHHHHHhCCeEEeec-------------------------CCCCCEEEEeCCCccCHHHHHHHHHHHHHH
Confidence 234455555554333332210 111478999999988888888777777654
No 317
>PRK06541 hypothetical protein; Provisional
Probab=99.50 E-value=8e-12 Score=120.86 Aligned_cols=289 Identities=16% Similarity=0.119 Sum_probs=166.4
Q ss_pred CCCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHH--hc---C---CCCeEEEcCCCccchHHHHHHhccc----
Q psy12791 56 SNNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTH--LL---S---AGDHIISGDDVYGGTYRYFAQVAPK---- 120 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~--~~---~---~gd~vl~~~~~y~~~~~~~~~~~~~---- 120 (393)
+.++...++.+.|++.... +...+.+||++|+ .++.. .. . ...+|+.-..+|++...........
T Consensus 92 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~ 171 (460)
T PRK06541 92 YAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFK 171 (460)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhc
Confidence 4567777888888887643 3577778899987 44421 11 1 1357888787777643221111000
Q ss_pred --CC---cEEEeeCCC----------C--------HHHHHhhcC----CCCcEEEEecCCCCcccccC----HHHHHHHH
Q psy12791 121 --IG---LEVDFVDLR----------K--------IENLIKYIK----PNTKMVWIENPTNPLMTVFD----VKAISAVV 169 (393)
Q Consensus 121 --~g---~~v~~~~~~----------d--------~~~l~~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~ 169 (393)
++ ..+..+|.. + ++.+++.+. +++.+|+++..+++.|.+.+ +++|.++|
T Consensus 172 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc 251 (460)
T PRK06541 172 APFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREIC 251 (460)
T ss_pred cccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHH
Confidence 00 112222211 1 255666663 34667777777999999988 99999999
Q ss_pred HhCCCcEEEEeCccCcc-cccC-----CCCCcCcEEEEcccccccCCCCc-eEEEEEecChHHHHHHHHHHH----hcCC
Q psy12791 170 KQHPDILLVLDNTFLTA-YYQK-----SLPWGVDIVLYSLTKYMNGHSDV-VMGATVTNDDSLQARLKFLQN----SMGV 238 (393)
Q Consensus 170 ~~~~~~~livDea~~~~-~~~~-----~~~~~~di~~~S~sK~~~G~~G~-r~G~~~~~~~~~~~~~~~~~~----~~~~ 238 (393)
+++ |+++|+||++..+ .... ......|+++ ++|.++ .|+ ++|+++++ +++.+.+..... ....
T Consensus 252 ~~~-g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~--~G~~pigav~~~-~~i~~~~~~~~~~~~~~~T~ 325 (460)
T PRK06541 252 DRY-DVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGIT--SGYSPLGAMIAS-DRLFEPFLDGPTMFLHGYTF 325 (460)
T ss_pred HHc-CCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--eccccc--CCccceeEEEEc-HHHHHHhhcCCCccccCCCC
Confidence 999 9999999999543 2111 1223467774 889994 464 79999997 777776643211 1122
Q ss_pred CCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH-
Q psy12791 239 VPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA- 315 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 315 (393)
..+|..+..+...++.+. ...++..+....+.+.|+++.. +|- +.+.++.|.++.+.+..+.
T Consensus 326 ~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-----~~~----------v~~vrg~Gl~~~ie~~~~~~ 390 (460)
T PRK06541 326 GGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-----LPI----------VGDVRGDGYFYGIELVKDKA 390 (460)
T ss_pred CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-----CCC----------eEEEEecceEEEEEEecCcc
Confidence 345666666655554432 2345555556666666654311 010 1112445778888873211
Q ss_pred -------HHH-----HHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHH
Q psy12791 316 -------EET-----RIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADL 383 (393)
Q Consensus 316 -------~~~-----~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l 383 (393)
... ..+.+.+...++-+... +.....|||++.+..++++++.+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~-------------------------~~g~~~lrl~Ppl~~t~~~id~~ 445 (460)
T PRK06541 391 TKETFTDDESERLLRGFLSPALFEAGLYCRAD-------------------------DRGDPVVQLAPPLISGQEEFDEI 445 (460)
T ss_pred cccCCcchhhhhhHHHHHHHHHHhCCeEEEec-------------------------CCCCCEEEEECCCCCCHHHHHHH
Confidence 111 12333333223222110 01136899999988888888888
Q ss_pred HHHHHHh
Q psy12791 384 DQALRKA 390 (393)
Q Consensus 384 ~~al~~~ 390 (393)
.++|++.
T Consensus 446 ~~~l~~~ 452 (460)
T PRK06541 446 EQILRSV 452 (460)
T ss_pred HHHHHHH
Confidence 7777654
No 318
>PLN02263 serine decarboxylase
Probab=99.49 E-value=1.5e-11 Score=116.85 Aligned_cols=207 Identities=13% Similarity=0.089 Sum_probs=142.9
Q ss_pred HHHHHHHHHhCCCc----EEEeccHHHHH-HHHHHh--cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----
Q psy12791 63 NLERCIASLEEAKH----GLCYSSGLGAV-TAVTHL--LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---- 131 (393)
Q Consensus 63 ~lr~~la~~~~~~~----~i~~~~G~~al-~~~~~~--~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---- 131 (393)
++-+.+++++|.+. .+++++|++++ .++... ..+...+++++.+|.+ +.++++..|++++.+|.+
T Consensus 137 ~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~S----v~KAa~llgi~~~~Vp~d~~g~ 212 (470)
T PLN02263 137 GVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS----VFKAARMYRMECVKVDTLVSGE 212 (470)
T ss_pred HHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHH----HHHHHHhcCCcceEeccCCCCc
Confidence 34455677777642 56777777774 544432 2233478888888875 678899999999999876
Q ss_pred -CHHHHHhhcCCC---CcEEEEecCCCCcccccCHHHHHHHHHhCCCc-----EEEEeCccCccccc---C--CCC--Cc
Q psy12791 132 -KIENLIKYIKPN---TKMVWIENPTNPLMTVFDVKAISAVVKQHPDI-----LLVLDNTFLTAYYQ---K--SLP--WG 195 (393)
Q Consensus 132 -d~~~l~~~l~~~---~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-----~livDea~~~~~~~---~--~~~--~~ 195 (393)
|+++|++++.++ +-+|+.+.++.++|.+=|+++|.++|+++ |+ |++||.||+.+... . .++ ..
T Consensus 213 mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~-g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~ 291 (470)
T PLN02263 213 IDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEEC-GFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKP 291 (470)
T ss_pred CcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHc-CCccCCeeEEEeccchhhHhhhcccccccCCCcC
Confidence 899999888654 34666788999999999999999999999 86 99999999875431 1 111 24
Q ss_pred CcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh--------cCCCC--CHHHHHHHHhc--cCCHHHHHHHHH
Q psy12791 196 VDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS--------MGVVP--SPFDCWLVTRG--LKTLPCRLKEHE 263 (393)
Q Consensus 196 ~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~ 263 (393)
+|-+..++|||+..+.+ .|.++.++ ...+.+.....+ .++-. .....|+.++. .+.+..+.++..
T Consensus 292 vDSIsvD~HK~l~~P~~--cgvll~R~-~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~ 368 (470)
T PLN02263 292 IGSVSVSGHKFVGCPMP--CGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCL 368 (470)
T ss_pred ccEEEECCccccCCCcC--EEEEEEeh-hhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 88999999999854544 88888874 433433221111 11111 13334444443 355777888888
Q ss_pred HHHHHHHHHHhhCC
Q psy12791 264 RGSIEVAKFLESHP 277 (393)
Q Consensus 264 ~~~~~l~~~l~~~~ 277 (393)
+.++.+.+.|++.+
T Consensus 369 ~~A~~l~~~l~~~g 382 (470)
T PLN02263 369 RNAHYLKDRLREAG 382 (470)
T ss_pred HHHHHHHHHHHhCC
Confidence 89999999998763
No 319
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.49 E-value=2.7e-12 Score=122.85 Aligned_cols=229 Identities=20% Similarity=0.172 Sum_probs=159.4
Q ss_pred hHHHHHHH----HHHHhCCC---cEEEeccHHHHH-HHHHHh---cC--C---CC------eEEEcCCCccchHHHHHHh
Q psy12791 60 TRRNLERC----IASLEEAK---HGLCYSSGLGAV-TAVTHL---LS--A---GD------HIISGDDVYGGTYRYFAQV 117 (393)
Q Consensus 60 ~~~~lr~~----la~~~~~~---~~i~~~~G~~al-~~~~~~---~~--~---gd------~vl~~~~~y~~~~~~~~~~ 117 (393)
...++++. ++++++.+ ...++++|++++ .++++. .. . +. +|+++.-.|.+ +.+.
T Consensus 98 ~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s----~~Ka 173 (460)
T COG0076 98 AAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFS----FEKA 173 (460)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhH----HHHH
Confidence 44444444 56667774 366777777774 444321 10 0 11 58888888875 7888
Q ss_pred cccCCcEEEeeCCC------CHHHHHhhcCCCCcE--EEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc
Q psy12791 118 APKIGLEVDFVDLR------KIENLIKYIKPNTKM--VWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ 189 (393)
Q Consensus 118 ~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~--v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~ 189 (393)
++.+|++...++.+ |++++++++++++.. |+.+.++.+||.+=|+++|.++|+++ +++++||.|++.+...
T Consensus 174 a~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~-~i~lHVDAA~GG~~~p 252 (460)
T COG0076 174 ARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEY-GIWLHVDAAFGGFLLP 252 (460)
T ss_pred HHHhCCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHc-CCcEEEEccccceeec
Confidence 89999887777654 799999999988766 88899999999999999999999999 9999999999986541
Q ss_pred --C---C--CC-CcCcEEEEcccccccCCCCceEEEEEecChH-HHHHHHHHHHhcCC-----------CC--CHHHHHH
Q psy12791 190 --K---S--LP-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDS-LQARLKFLQNSMGV-----------VP--SPFDCWL 247 (393)
Q Consensus 190 --~---~--~~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~-~~~~~~~~~~~~~~-----------~~--~~~~~~~ 247 (393)
. . .. .++|-++.++||++.-++| .|+++.++++ +.+.+.....+++. -. ....+|+
T Consensus 253 f~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~--~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~ 330 (460)
T COG0076 253 FLEPDGRWDFGLEGVDSITVDGHKYGLAPIG--CGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYA 330 (460)
T ss_pred ccCccchhhcCCCCceEEEECcccccCCCCC--ceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHH
Confidence 1 1 11 2678999999999866777 9999999874 44443322222221 01 1122333
Q ss_pred HHhc--cCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc
Q psy12791 248 VTRG--LKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN 312 (393)
Q Consensus 248 ~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
..+. .+.+....++..++++++++.|+..+..+-+.-|. .+++.|+.+
T Consensus 331 ~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~-----------------l~~V~fr~~ 380 (460)
T COG0076 331 NLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPE-----------------LPIVAFRLK 380 (460)
T ss_pred HHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCc-----------------cceEEEEcC
Confidence 3333 35677778888899999999998876555444444 467888874
No 320
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.49 E-value=2.1e-11 Score=117.51 Aligned_cols=287 Identities=13% Similarity=0.003 Sum_probs=166.1
Q ss_pred CCCchHHHHHHHHHHHhCC---CcEEEeccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHhcc-----c--C-
Q psy12791 56 SNNPTRRNLERCIASLEEA---KHGLCYSSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQVAP-----K--I- 121 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~---~~~i~~~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~~-----~--~- 121 (393)
+.++...+|.+.|++.... +...+.+||++|+ .++.. .....++|+.-...|++.......+.. . +
T Consensus 94 ~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~ 173 (441)
T PRK05769 94 FYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFF 173 (441)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCC
Confidence 3456778888888887642 3566778888887 54431 223346788878888775422222110 0 0
Q ss_pred --CcEEEeeCCC----------C--------HHHHHh-hc-----CCCCcEEEEecCCCCcccccC----HHHHHHHHHh
Q psy12791 122 --GLEVDFVDLR----------K--------IENLIK-YI-----KPNTKMVWIENPTNPLMTVFD----VKAISAVVKQ 171 (393)
Q Consensus 122 --g~~v~~~~~~----------d--------~~~l~~-~l-----~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~ 171 (393)
-..+..++.. + ++.+++ .+ .+++.+|+++..+...|.+.| +++|.++|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~ 253 (441)
T PRK05769 174 PLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADK 253 (441)
T ss_pred CCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHH
Confidence 0123333321 1 223444 22 235788999988888899888 9999999999
Q ss_pred CCCcEEEEeCccCccc-cc-----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHH
Q psy12791 172 HPDILLVLDNTFLTAY-YQ-----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDC 245 (393)
Q Consensus 172 ~~~~~livDea~~~~~-~~-----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (393)
+ |+++|+||++..+. .. .......|+++ ++|.++ .|+++|+++++ +++.+..... .......++..+
T Consensus 254 ~-g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt--~~K~l~--~G~p~gav~~~-~~i~~~~~~~-~~~T~~g~p~~~ 326 (441)
T PRK05769 254 Y-GILLIDDEVQTGMGRTGKMFAIEHFGVEPDIIT--LAKAIA--GGLPLGAVIGR-AELMFLPPGS-HANTFGGNPVAA 326 (441)
T ss_pred c-CCEEEEechhhCCCcccceehhhccCCCCCEEE--Eccccc--CCcccEEEEEe-hhhhhcCCCC-CCCCCCcCHHHH
Confidence 9 99999999998531 11 11122357774 789994 46889999987 6665433211 111112356666
Q ss_pred HHHHhccCCHHH-HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-----HHHHH
Q psy12791 246 WLVTRGLKTLPC-RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-----AEETR 319 (393)
Q Consensus 246 ~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 319 (393)
..+...++.+++ ..++..+..+.+.+.|++... .++- ..+.++.|.++.+.+..+ .+...
T Consensus 327 aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~~l~~----~~~~----------~~~vrg~G~~~~i~~~~~~~~~~~~~~~ 392 (441)
T PRK05769 327 AAALATLEELEEGLLENAQKLGEYLRKELKELKE----KYEF----------IGDVRGLGLMIGVELVKDRKEPDPKLRD 392 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hCCC----------eeeeecceEEEEEEeccCCccccHHHHH
Confidence 666665554432 233444444555555543210 0010 112245677888887422 13344
Q ss_pred HHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 320 IFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 320 ~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.+.+.+...++-+.. .....+|+++....++++++.+.+++++.
T Consensus 393 ~~~~~~~~~Gil~~~---------------------------~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 436 (441)
T PRK05769 393 KVLYEAFKRGLLLLG---------------------------AGKSAIRIIPPLIITEEEADIGLEILEEA 436 (441)
T ss_pred HHHHHHHhCCcEEec---------------------------CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 454444333322210 11367999999999999998888888765
No 321
>PRK07678 aminotransferase; Validated
Probab=99.48 E-value=2.8e-11 Score=117.00 Aligned_cols=292 Identities=14% Similarity=0.096 Sum_probs=170.2
Q ss_pred CCCchHHHHHHHHHHHhCCC-cEEEeccHHHHH-HHHHH---hc----CCC-CeEEEcCCCccchHHHHHHhccc-----
Q psy12791 56 SNNPTRRNLERCIASLEEAK-HGLCYSSGLGAV-TAVTH---LL----SAG-DHIISGDDVYGGTYRYFAQVAPK----- 120 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~al-~~~~~---~~----~~g-d~vl~~~~~y~~~~~~~~~~~~~----- 120 (393)
++++...+|.+.|++..+.. ...+.+||++|+ .++.. .. ++| .+|+.-...|++...........
T Consensus 86 ~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~ 165 (451)
T PRK07678 86 QSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKY 165 (451)
T ss_pred cCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCccccc
Confidence 45667788999999887654 455668899986 44422 11 123 56888888887743221111000
Q ss_pred -CC---cEEEeeCCC--------------C---HHHHHhhcC----CCCcEEEEecCCCCcccccC----HHHHHHHHHh
Q psy12791 121 -IG---LEVDFVDLR--------------K---IENLIKYIK----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQ 171 (393)
Q Consensus 121 -~g---~~v~~~~~~--------------d---~~~l~~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~ 171 (393)
++ ..+..++.. + ++.+++.+. +++.+|+++..+...|.+.| ++++.++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~ 245 (451)
T PRK07678 166 KYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQK 245 (451)
T ss_pred ccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH
Confidence 00 112222221 1 223444452 46889999988877888876 8999999999
Q ss_pred CCCcEEEEeCccCcc-ccc-----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH------HHhcCCC
Q psy12791 172 HPDILLVLDNTFLTA-YYQ-----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL------QNSMGVV 239 (393)
Q Consensus 172 ~~~~~livDea~~~~-~~~-----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~------~~~~~~~ 239 (393)
| |+++|+||++..+ ... .......|+++ ++|.++| ..+.+|.++++ +++.+.+... .......
T Consensus 246 ~-g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt--~gK~lgg-G~~Pi~av~~~-~~i~~~~~~~~~~~~~~h~~T~~ 320 (451)
T PRK07678 246 H-GALLISDEVICGFGRTGKAFGFMNYGVKPDIIT--MAKGITS-AYLPLSATAVK-KEIYEAFKGKGEYEHFRHVNTFG 320 (451)
T ss_pred c-CCEEEEeehhhcCCcCchhHHHHhcCCCCCEEE--eeccccc-CCcceeEEEEc-HHHHHHHhccCcccccccCCCCC
Confidence 9 9999999999753 111 11234578885 6799953 22569999997 7888776421 1112223
Q ss_pred CCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC
Q psy12791 240 PSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG 313 (393)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
.+|..++.+.+.++.+++ ..++..+..+.+.+.|++ ++.+. +.++.|.++.+.+..
T Consensus 321 gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~------------------~vrg~Gl~~~i~~~~ 382 (451)
T PRK07678 321 GNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVG------------------DIRGKGLLVGIELVN 382 (451)
T ss_pred cCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEE------------------EEEeeceEEEEEEec
Confidence 457777666666654432 233344444444444432 22222 224567788888731
Q ss_pred --------CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHH
Q psy12791 314 --------GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQ 385 (393)
Q Consensus 314 --------~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~ 385 (393)
+.+....+.+.+...++-+...+ +.. ......|||++.+..++++++.+.+
T Consensus 383 ~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g-------~~v--------------~~~~~~lrl~Ppl~it~~eid~~~~ 441 (451)
T PRK07678 383 DKETKEPADNDKVASVVAACKEKGLIIGKNG-------DTV--------------AGYNNVLTLSPPLVISSEEIAFIVG 441 (451)
T ss_pred CCcccCcCchHHHHHHHHHHHHCCcEEeecC-------ccc--------------cCCCCEEEEECCCcCCHHHHHHHHH
Confidence 12334556555544443322110 000 0013679999999988888888888
Q ss_pred HHHHhh
Q psy12791 386 ALRKAC 391 (393)
Q Consensus 386 al~~~~ 391 (393)
++++..
T Consensus 442 ~l~~~l 447 (451)
T PRK07678 442 TLKTAL 447 (451)
T ss_pred HHHHHH
Confidence 887653
No 322
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.47 E-value=2e-12 Score=119.28 Aligned_cols=230 Identities=16% Similarity=0.168 Sum_probs=145.7
Q ss_pred eeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCC-CcEEEeccHHHH-HHHHH--HhcCCCCeEEEcCCCccchHHHH
Q psy12791 39 FKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEA-KHGLCYSSGLGA-VTAVT--HLLSAGDHIISGDDVYGGTYRYF 114 (393)
Q Consensus 39 ~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~-~~~i~~~~G~~a-l~~~~--~~~~~gd~vl~~~~~y~~~~~~~ 114 (393)
+.+++.+++..+..|+. |...--++.+.+.+.... +..-+++||++| +.++. .-....|+|+.-+-+|++..+.+
T Consensus 74 V~~Av~~~l~~G~~fg~-Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~ 152 (432)
T COG0001 74 VVEAVQEQLERGLSFGA-PTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSL 152 (432)
T ss_pred HHHHHHHHHHhcCCCCC-CCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHH
Confidence 33444444445555654 334444566777776665 568899999999 45543 23455789999999998876544
Q ss_pred HHhc----------ccCCc------EEEeeCCCCHHHHHhhcCC---CCcEEEEecCCCCcccccC----HHHHHHHHHh
Q psy12791 115 AQVA----------PKIGL------EVDFVDLRKIENLIKYIKP---NTKMVWIENPTNPLMTVFD----VKAISAVVKQ 171 (393)
Q Consensus 115 ~~~~----------~~~g~------~v~~~~~~d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~----~~~l~~l~~~ 171 (393)
..-+ ...|+ .+..+|.+|++.++++++. +..+|+++......|.+.| +++|.++|++
T Consensus 153 lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e 232 (432)
T COG0001 153 LVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEE 232 (432)
T ss_pred HhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHH
Confidence 3321 11121 3566677899999888864 5788999877777788887 8899999999
Q ss_pred CCCcEEEEeCccCccccc-----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh-c-CC-CCCHH
Q psy12791 172 HPDILLVLDNTFLTAYYQ-----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS-M-GV-VPSPF 243 (393)
Q Consensus 172 ~~~~~livDea~~~~~~~-----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~ 243 (393)
+ |+++|.||+...+-.. .......|+. ++.|..+ .|+.+|.+.++ .++++.+...... . |. +.+|.
T Consensus 233 ~-G~lLI~DEViTGFR~~~gGaq~~~gi~PDlt--tlGKiIG--GGlP~ga~gGr-~eiM~~~~p~g~vyqaGT~sgnpl 306 (432)
T COG0001 233 H-GALLIFDEVITGFRVALGGAQGYYGVEPDLT--TLGKIIG--GGLPIGAFGGR-AEIMEQLAPLGPVYQAGTLSGNPL 306 (432)
T ss_pred c-CcEEEEecchhhcccCCcccccccCcCcchh--hhhhhhc--CCcceeeeccH-HHHHhhhCCCCCccccCCCCCcHH
Confidence 9 9999999998865432 1112345665 5789995 56779999988 8888876543321 1 11 12344
Q ss_pred HHHHHHhccCCHHH---HHHHHHHHHHHHHHHHhh
Q psy12791 244 DCWLVTRGLKTLPC---RLKEHERGSIEVAKFLES 275 (393)
Q Consensus 244 ~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~ 275 (393)
.-......++.+.. -.+++.+...+|.+-|++
T Consensus 307 amaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~ 341 (432)
T COG0001 307 AMAAGLATLEELMTEEGVYERLDALGERLAEGLRA 341 (432)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 43333333333322 244555555566655553
No 323
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.47 E-value=2.4e-11 Score=117.05 Aligned_cols=287 Identities=15% Similarity=0.104 Sum_probs=164.2
Q ss_pred CCchHHHHHHHHHHHhC--CCcEEEeccHHHHH-HHHHH--hc-----CC-CCeEEEcCCCccchHHHH---------HH
Q psy12791 57 NNPTRRNLERCIASLEE--AKHGLCYSSGLGAV-TAVTH--LL-----SA-GDHIISGDDVYGGTYRYF---------AQ 116 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~--~~~~i~~~~G~~al-~~~~~--~~-----~~-gd~vl~~~~~y~~~~~~~---------~~ 116 (393)
.++...++.++|++... .+...+.+||++|+ .++.. .. .+ ..+|+.-...|++..... ..
T Consensus 87 ~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~ 166 (442)
T PRK13360 87 GHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRK 166 (442)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhh
Confidence 45667788888888764 34577788999987 44431 11 12 357888888887632110 00
Q ss_pred hcccCCcEEEeeCCC------------------CHHHHHhhcC----CCCcEEEEecCCCCcccccC----HHHHHHHHH
Q psy12791 117 VAPKIGLEVDFVDLR------------------KIENLIKYIK----PNTKMVWIENPTNPLMTVFD----VKAISAVVK 170 (393)
Q Consensus 117 ~~~~~g~~v~~~~~~------------------d~~~l~~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~ 170 (393)
........+..+|.. .++++++.+. +++.+|+++..+...|.+.| +++|.++|+
T Consensus 167 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~ 246 (442)
T PRK13360 167 AFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICD 246 (442)
T ss_pred ccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 000000112223321 1346666663 35778999988988899988 999999999
Q ss_pred hCCCcEEEEeCccCcc-cccC-----CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH-------HHhcC
Q psy12791 171 QHPDILLVLDNTFLTA-YYQK-----SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL-------QNSMG 237 (393)
Q Consensus 171 ~~~~~~livDea~~~~-~~~~-----~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~-------~~~~~ 237 (393)
++ |+++|+||++..+ .... ......|++ +++|.++| ..+.+|.++++ +++.+.+... .....
T Consensus 247 ~~-g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--t~gK~l~g-G~~P~gav~~~-~~i~~~~~~~~~~~~~~~~~~T 321 (442)
T PRK13360 247 KH-GILLIFDEVITGFGRLGAPFAAQYFGVTPDLL--TCAKGLTN-GAIPMGAVFVS-SEIHDAFMQGPEAGIEFFHGYT 321 (442)
T ss_pred Hc-CCEEEEechhhCCCCCccchhhhhcCCCCcee--eeeecccc-CccceEEEEEc-HHHHHHhhcCCccccccccCCC
Confidence 99 9999999999542 2111 122346776 67899952 22458888887 7777765421 01112
Q ss_pred CCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC--
Q psy12791 238 VVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-- 313 (393)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-- 313 (393)
...++..+..+...++.+.+ ..++..+....+.+.|+++.. ++. +.+.++.|.+..+.+..
T Consensus 322 ~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~-----~~~----------v~~vrG~Gl~~~~~l~~~~ 386 (442)
T PRK13360 322 YSGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRD-----APH----------VIDIRNLGLVGAVELAPRD 386 (442)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-----CCC----------eeeeeccceEEEEEEecCC
Confidence 22466666666655544332 234444444555555553211 111 01123445555555531
Q ss_pred --CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 314 --GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 314 --~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+....+.+.+...++-+.. ..+.+||++.+..++++++.+.++|.+..
T Consensus 387 ~~~~~~~~~~~~~l~~~Gvl~~~----------------------------~~~~lr~~Ppl~~t~~eid~~~~~l~~~l 438 (442)
T PRK13360 387 GKPGKRAYEVFLKCFEKGLMIRY----------------------------TGDILALSPPLIIEEAQIDELFDILAQAL 438 (442)
T ss_pred CCcchhHHHHHHHHHHCCcEEEe----------------------------cCCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence 112334444443332322210 13579999999999999998888887653
No 324
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.47 E-value=2.1e-11 Score=105.53 Aligned_cols=249 Identities=21% Similarity=0.287 Sum_probs=165.0
Q ss_pred CchHHHHHHHHHHHhCCCcEE---EeccHHHHH-HHHHHhcCCCCeEEEcCCC-ccchHHHHHHh----------cccCC
Q psy12791 58 NPTRRNLERCIASLEEAKHGL---CYSSGLGAV-TAVTHLLSAGDHIISGDDV-YGGTYRYFAQV----------APKIG 122 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i---~~~~G~~al-~~~~~~~~~gd~vl~~~~~-y~~~~~~~~~~----------~~~~g 122 (393)
+-++..|++..|+.+|.+.++ -+.||+.|| .++..+++|||+.+...-. |. .+... ++.+|
T Consensus 64 D~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYD----TLeevIG~rg~~~gSL~dfg 139 (416)
T COG4100 64 DLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYD----TLEEVIGLRGEGQGSLKDFG 139 (416)
T ss_pred ccchhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcch----hHHHHhccCCCCcccHHHhC
Confidence 567888999999999998544 478999999 8899999999998754322 22 23322 34456
Q ss_pred cEEEeeCCC-----CHHHHHhhcCCCCcEEEEec----CCCCcccccCHHHHHHHHHhC-CCcEEEEeCccCcccc-cCC
Q psy12791 123 LEVDFVDLR-----KIENLIKYIKPNTKMVWIEN----PTNPLMTVFDVKAISAVVKQH-PDILLVLDNTFLTAYY-QKS 191 (393)
Q Consensus 123 ~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~----p~nptG~~~~~~~l~~l~~~~-~~~~livDea~~~~~~-~~~ 191 (393)
+....+|+. |.+.+...++++||+|-+.- .+-|+-.+-+++++..+.++. |+++++||++|+.++. ..|
T Consensus 140 i~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~EP 219 (416)
T COG4100 140 IKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKEP 219 (416)
T ss_pred cceeecccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccCc
Confidence 666777764 89999999999999999853 345555555688888888875 8999999999999875 357
Q ss_pred CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH--hcCC--CCCHHHHHHHHhccCCHHHHHHHHHHHHH
Q psy12791 192 LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN--SMGV--VPSPFDCWLVTRGLKTLPCRLKEHERGSI 267 (393)
Q Consensus 192 ~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (393)
...|+|++.+|+-|.-+|----.+||++++ +++++....... ..|. ..+..+....-+++--.+....+..+.+.
T Consensus 220 t~vGaDliAGSLIKNpGGgiaktGGYiaGk-~~~ve~~~yRlTaPGIG~e~Gat~~~l~~myqGlFlAPhvv~qa~Kga~ 298 (416)
T COG4100 220 THVGADLIAGSLIKNPGGGIAKTGGYIAGK-AELVEAAAYRLTAPGIGREGGATLYSLREMYQGLFLAPHVVSQAVKGAH 298 (416)
T ss_pred cccchhhhccceeeCCCCceeeccceeech-HHHHHhhceeeecCCccccccccHHHHHHHHhhhccchHHHHHHhhhhH
Confidence 778999999999998864333347999998 888886642221 1111 11222222222233222333444445555
Q ss_pred HHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcce-EEEEEcCCHHHHHHHHHhcCc
Q psy12791 268 EVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGM-LSFYVNGGAEETRIFLESLLI 327 (393)
Q Consensus 268 ~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~ 327 (393)
-...+|..+ .++..++.. .....+ -.+.+ ++++.+-.|+++++.
T Consensus 299 fta~~le~l------g~~~~P~~~---------~kRtDlIQavkf-~~~eKmIaFcqaiQ~ 343 (416)
T COG4100 299 FTARFLEKL------GFPVNPKYD---------AKRTDLIQAVKF-GSKEKMIAFCQAIQA 343 (416)
T ss_pred HHHHHHHHc------CCCCCCccc---------ccccchhhheec-CCHHHHHHHHHHHhh
Confidence 556666643 222222211 011223 46777 689999999998864
No 325
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.47 E-value=2.4e-11 Score=117.19 Aligned_cols=288 Identities=15% Similarity=0.110 Sum_probs=165.6
Q ss_pred CCCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHH--hc----C-C-CCeEEEcCCCccchHHHHH---------
Q psy12791 56 SNNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTH--LL----S-A-GDHIISGDDVYGGTYRYFA--------- 115 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~--~~----~-~-gd~vl~~~~~y~~~~~~~~--------- 115 (393)
+.++...+|.++|++.... +...+.+||++|+ .++.. .. . + ..+|+.-...|++......
T Consensus 89 ~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~ 168 (445)
T PRK09221 89 MGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNR 168 (445)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhh
Confidence 3456777888999887643 3577788899887 44421 11 1 1 3468888888876421110
Q ss_pred HhcccCCcEEEeeCCC------------------CHHHHHhhcC----CCCcEEEEecCCCCcccccC----HHHHHHHH
Q psy12791 116 QVAPKIGLEVDFVDLR------------------KIENLIKYIK----PNTKMVWIENPTNPLMTVFD----VKAISAVV 169 (393)
Q Consensus 116 ~~~~~~g~~v~~~~~~------------------d~~~l~~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~ 169 (393)
......-..+..++.. ..+++++.+. +++.+|+++......|.+.| +++|.++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc 248 (445)
T PRK09221 169 KMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREIC 248 (445)
T ss_pred hccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHH
Confidence 0000000112223221 1245565553 45789999999988999988 99999999
Q ss_pred HhCCCcEEEEeCccCcc-ccc-----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH-------HHhc
Q psy12791 170 KQHPDILLVLDNTFLTA-YYQ-----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL-------QNSM 236 (393)
Q Consensus 170 ~~~~~~~livDea~~~~-~~~-----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~-------~~~~ 236 (393)
+++ |+++|+||++..+ ... .......|++ +++|.++| ..+.+|.++++ +++.+.+... ....
T Consensus 249 ~~~-g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~--~~gK~l~g-G~~Pi~av~~~-~~i~~~~~~~~~~~~~~~~~~ 323 (445)
T PRK09221 249 DKH-GILLIFDEVITGFGRLGAAFAAERFGVTPDII--TFAKGLTN-GAIPMGAVIAS-DEIYDAFMQGPEYAIEFFHGY 323 (445)
T ss_pred HHc-CCEEEEeehhhCCCcCchhhHHHhcCCCCCEE--Eecccccc-CcccceeeEEc-HHHHHhhccCccccccccccc
Confidence 999 9999999998642 111 1122345766 57899952 12348888887 7777766421 0111
Q ss_pred CCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-
Q psy12791 237 GVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG- 313 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~- 313 (393)
.....+..+..+...++.+. ...++..+..+.+.+.|+++.. ++. +.+.++.|.+..+.+..
T Consensus 324 T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~-----~~~----------v~~vrg~Gl~~~v~~~~~ 388 (445)
T PRK09221 324 TYSAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLKG-----LPH----------VIDIRNIGLVAGIELAPR 388 (445)
T ss_pred CCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhcc-----CCC----------EEEEecCceEEEEEEecc
Confidence 22245666666655554432 2344455555556666654311 111 11224556666666632
Q ss_pred ---CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 314 ---GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 314 ---~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+......+.+.+...++.+.. ....+|+++.+..++++++.+.++|++.
T Consensus 389 ~~~~~~~~~~~~~~~~~~Gv~~~~----------------------------~~~~lr~~Ppl~~t~~eid~~~~~l~~~ 440 (445)
T PRK09221 389 PGAPGARGYEAFMKCFEKGLLVRY----------------------------TGDTIALSPPLIIEKAQIDELVDALGDA 440 (445)
T ss_pred cccccchHHHHHHHHHHCCeEEee----------------------------cCCEEEEECCccCCHHHHHHHHHHHHHH
Confidence 111233444444332322211 1357999999998988888888888765
Q ss_pred h
Q psy12791 391 C 391 (393)
Q Consensus 391 ~ 391 (393)
.
T Consensus 441 l 441 (445)
T PRK09221 441 L 441 (445)
T ss_pred H
Confidence 3
No 326
>PRK05965 hypothetical protein; Provisional
Probab=99.47 E-value=3.2e-11 Score=116.79 Aligned_cols=285 Identities=15% Similarity=0.087 Sum_probs=163.0
Q ss_pred CCchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHHH--hc----C-C-CCeEEEcCCCccchHHHHHHhc------c
Q psy12791 57 NNPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVTH--LL----S-A-GDHIISGDDVYGGTYRYFAQVA------P 119 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~~--~~----~-~-gd~vl~~~~~y~~~~~~~~~~~------~ 119 (393)
.++...+|.++|++..... ...+.+||++|+ .++.. .. . + ..+|+.-..+|++......... .
T Consensus 88 ~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~ 167 (459)
T PRK05965 88 GSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHR 167 (459)
T ss_pred CCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhc
Confidence 4566778889998876432 455567899987 54432 11 1 2 3568888888877432111110 0
Q ss_pred cCCc---EEEeeCC---------CC--------HHHHHhhcC----CCCcEEEEecCCCCcccccC----HHHHHHHHHh
Q psy12791 120 KIGL---EVDFVDL---------RK--------IENLIKYIK----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQ 171 (393)
Q Consensus 120 ~~g~---~v~~~~~---------~d--------~~~l~~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~ 171 (393)
.++. .+..++. +| ++++++.+. +++.+|+++..+...|.+.+ +++|.++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~ 247 (459)
T PRK05965 168 GFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRE 247 (459)
T ss_pred ccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHH
Confidence 1110 1122221 12 245666663 45789999988888888776 8999999999
Q ss_pred CCCcEEEEeCccCccc-c-----cCCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHH-------HHhcC
Q psy12791 172 HPDILLVLDNTFLTAY-Y-----QKSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFL-------QNSMG 237 (393)
Q Consensus 172 ~~~~~livDea~~~~~-~-----~~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~-------~~~~~ 237 (393)
| |+++|+||++..+- . ........|+++ ++|.++ .| +.+|.++++ +++.+.+... .....
T Consensus 248 ~-gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~--gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~h~~T 321 (459)
T PRK05965 248 L-GILFVADEVITGFGRTGPLFACEAEGVVPDLMT--VAKGLT--SGYVPMGAVLMS-DHVYQGIADGAGAAAPVGHGYT 321 (459)
T ss_pred c-CCEEEEechhccCccCchhhhHhhcCCCCCeEE--echhhc--cCCcceeEEEEc-HHHHHHHhccccccccccccCC
Confidence 9 99999999998641 1 112233578886 579995 35 369999997 7887766421 11112
Q ss_pred CCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH
Q psy12791 238 VVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA 315 (393)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
....|..+..+.+.++.+++ ..++..+....+.+.|+++. .+|. +.+.++.|.++.+.+..+.
T Consensus 322 ~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~-----~~~~----------v~~vrG~Gl~~gie~~~~~ 386 (459)
T PRK05965 322 YSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALR-----AHPL----------VGDVRGRGLLGALELVADK 386 (459)
T ss_pred CCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhc-----cCCC----------EEEEeecceEEEEEEeccc
Confidence 23467777766666654432 23333344444444444321 0111 1233566778888874211
Q ss_pred ----------HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHH
Q psy12791 316 ----------EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQ 385 (393)
Q Consensus 316 ----------~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~ 385 (393)
+...++.+.+...++-+.. .....||+.+.+..++++++.+.+
T Consensus 387 ~~~~~~~~~~~~~~~i~~~~~~~Gll~~~---------------------------~g~~~i~~~PpL~it~~ei~~~~~ 439 (459)
T PRK05965 387 ATKTPFDAALDPADRIFDRAYANGLVFRA---------------------------FGDGVLGFAPALCCTEGEFDLIFE 439 (459)
T ss_pred cccCCCCchhHHHHHHHHHHHhCCeEEEe---------------------------cCCcEEEEECCCcCCHHHHHHHHH
Confidence 1234444444333322211 013678888777777776666666
Q ss_pred HHHH
Q psy12791 386 ALRK 389 (393)
Q Consensus 386 al~~ 389 (393)
++.+
T Consensus 440 ~l~~ 443 (459)
T PRK05965 440 RTRK 443 (459)
T ss_pred HHHH
Confidence 6554
No 327
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.47 E-value=1.4e-11 Score=117.96 Aligned_cols=285 Identities=16% Similarity=0.138 Sum_probs=165.8
Q ss_pred CCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHH---hc-C---C-CCeEEEcCCCccchHHHHHHhccc-----
Q psy12791 57 NNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTH---LL-S---A-GDHIISGDDVYGGTYRYFAQVAPK----- 120 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~---~~-~---~-gd~vl~~~~~y~~~~~~~~~~~~~----- 120 (393)
.++...+|.+.|++.... +...+.+||++|+ .++.. .. . + ..+|+.-...|++.......+...
T Consensus 81 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~ 160 (422)
T PRK05630 81 THEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMH 160 (422)
T ss_pred CCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCccccc
Confidence 456678899999988643 3577788999987 44421 11 1 2 246888888887643211111110
Q ss_pred --CC---cEEEeeCCC--------C----HHHHHhhcCCCCcEEEEecC-CCCcccccC----HHHHHHHHHhCCCcEEE
Q psy12791 121 --IG---LEVDFVDLR--------K----IENLIKYIKPNTKMVWIENP-TNPLMTVFD----VKAISAVVKQHPDILLV 178 (393)
Q Consensus 121 --~g---~~v~~~~~~--------d----~~~l~~~l~~~~~~v~l~~p-~nptG~~~~----~~~l~~l~~~~~~~~li 178 (393)
++ ..+..+|.. + .+.+++.+.+++.+|+++.. +...|...+ +++|.++|+++ |+++|
T Consensus 161 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~-g~llI 239 (422)
T PRK05630 161 SLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKH-DILLI 239 (422)
T ss_pred ccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEEE
Confidence 00 112222221 1 23445555567889999874 777788775 88999999999 99999
Q ss_pred EeCccCcccc-c-----CCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHH------HHhcCCCCCHHHH
Q psy12791 179 LDNTFLTAYY-Q-----KSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFL------QNSMGVVPSPFDC 245 (393)
Q Consensus 179 vDea~~~~~~-~-----~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 245 (393)
+||++..+-- . .......|++ +++|.++| | ..+|+++++ +++.+.+... ........+|..+
T Consensus 240 ~DEv~tG~GrtG~~~a~~~~gv~PDi~--t~gK~l~g--G~~p~~av~~~-~~i~~~~~~~~~~~~~~h~~T~~g~Pla~ 314 (422)
T PRK05630 240 ADEIATGFGRTGELFATLAAGVTPDIM--CVGKALTG--GFMSFAATLCT-DKVAQLISTPNGGGALMHGPTFMANPLAC 314 (422)
T ss_pred EecceeCCCcCchhhHHHhcCCCCCee--eeechhhc--Cccccceeecc-HHHHHHHhccCCCCccccCCCCcCCHHHH
Confidence 9999965311 1 1112346777 67899853 3 248888887 7887766421 1111223456666
Q ss_pred HHHHhccCCHHH--HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHH
Q psy12791 246 WLVTRGLKTLPC--RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLE 323 (393)
Q Consensus 246 ~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
..+...++.+.+ ..++..+....+.+.|+.+. .+|. +.+.++.|.++.+.+. ++.....+.+
T Consensus 315 aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~-----~~~~----------v~~vRg~Gl~~~ie~~-~~~~~~~~~~ 378 (422)
T PRK05630 315 AVAHASLEIIETGMWRKQVKRIEAELIAGLSPLA-----HLPG----------VADVRVLGAIGVVEME-QPVDMEEATQ 378 (422)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhh-----cCCC----------eeeeeccccEEEEEEC-CcccHHHHHH
Confidence 666555544432 23344444444555444211 0111 1223566788999984 3223344544
Q ss_pred hcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 324 SLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 324 ~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+...++-+.. ..+.+||.+.+..++++++.+.++|++..
T Consensus 379 ~~~~~Gl~~~~----------------------------~g~~l~~~PpL~it~~~i~~~~~~l~~al 418 (422)
T PRK05630 379 AAVDHGVWLRP----------------------------FGRLVYVMPPYITTSEQIAQICAALAAAV 418 (422)
T ss_pred HHHHCCeEEEe----------------------------cCCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 44333322210 02578999998888888888888887653
No 328
>PRK06149 hypothetical protein; Provisional
Probab=99.45 E-value=1.6e-11 Score=129.01 Aligned_cols=320 Identities=15% Similarity=0.081 Sum_probs=183.8
Q ss_pred CCCCC-CCCCCCCc-cCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhC--CCcEEEeccHHHHH-HHHH--Hhc
Q psy12791 22 DQWRS-QCVIPPII-LSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEE--AKHGLCYSSGLGAV-TAVT--HLL 94 (393)
Q Consensus 22 ~~~~~-~~~~~p~~-~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~--~~~~i~~~~G~~al-~~~~--~~~ 94 (393)
..++| .++...++ ..+.+.+++.+++......+++..+...+|.++|++++. .+...+++||++|. .++. ...
T Consensus 585 ~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~ 664 (972)
T PRK06149 585 RSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAA 664 (972)
T ss_pred CEEEECCCCccccCCCCHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHh
Confidence 45667 33333344 334555444443332222334455777889999999873 45688889999986 4443 122
Q ss_pred CCCCeEEEcCCCccchHHHHHHhc-c---cCCc------EEEeeC--------C--CC-----HHHHHhhc------CCC
Q psy12791 95 SAGDHIISGDDVYGGTYRYFAQVA-P---KIGL------EVDFVD--------L--RK-----IENLIKYI------KPN 143 (393)
Q Consensus 95 ~~gd~vl~~~~~y~~~~~~~~~~~-~---~~g~------~v~~~~--------~--~d-----~~~l~~~l------~~~ 143 (393)
...++|+..+..|++.......+. . ..+. .+..++ . ++ .+++++.+ .++
T Consensus 665 tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 744 (972)
T PRK06149 665 SGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRG 744 (972)
T ss_pred cCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCc
Confidence 334568877777775321111110 0 0000 111121 1 11 13333322 135
Q ss_pred CcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcc-cccC------CCCCcCcEEEEcccccccCCCC
Q psy12791 144 TKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTA-YYQK------SLPWGVDIVLYSLTKYMNGHSD 212 (393)
Q Consensus 144 ~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~-~~~~------~~~~~~di~~~S~sK~~~G~~G 212 (393)
+.+|+++......|.+.+ +++|.++|++| |+++|+||++..+ -... ......||+ +++|.++ .|
T Consensus 745 iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~-g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--t~gK~lg--~G 819 (972)
T PRK06149 745 LAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR-GGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAKGMG--NG 819 (972)
T ss_pred eEEEEEcccccCCCcccCCHHHHHHHHHHHHHc-CCEEEEEeehhcCCccCccchhhhhcCCCCCEE--Eeccccc--CC
Confidence 778888888888888887 99999999999 9999999999542 2111 122346887 6789995 35
Q ss_pred ceEEEEEecChHHHHHHHHHHH-hcCCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeCC
Q psy12791 213 VVMGATVTNDDSLQARLKFLQN-SMGVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLHP 285 (393)
Q Consensus 213 ~r~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~ 285 (393)
+.+|+++++ +++.+.+..... ......+|..+..+.+.++.+++ ..++..+.-..+.+.|++ ++.+
T Consensus 820 ~Pl~av~~~-~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i------ 892 (972)
T PRK06149 820 HPLGAVITR-REIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLI------ 892 (972)
T ss_pred eeeEEEEEc-HHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCe------
Confidence 679999997 788877653111 11234577777777666654432 122333333444444443 2222
Q ss_pred CCCCCcchHHHhhhcCCCcceEEEEEcC-------CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHh
Q psy12791 286 GLPSHPNHELAKSQWSGTSGMLSFYVNG-------GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRD 358 (393)
Q Consensus 286 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~ 358 (393)
.+.+|.|.++.+.+.. +.+....+.+.+...++-+...
T Consensus 893 ------------~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~----------------------- 937 (972)
T PRK06149 893 ------------GAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPT----------------------- 937 (972)
T ss_pred ------------EEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeec-----------------------
Confidence 2235667888888731 2334556666655444333221
Q ss_pred hcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 359 ALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 359 ~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
|...+.|||...+..++++++.+.++|++.
T Consensus 938 --g~~~~vl~~~Ppl~it~~~id~~~~~l~~~ 967 (972)
T PRK06149 938 --GDHLNILKIKPPLCLDRESADFFVDMLDRV 967 (972)
T ss_pred --CCCCCEEEEECCCcCCHHHHHHHHHHHHHH
Confidence 112467888888888888888777777654
No 329
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.44 E-value=4.5e-11 Score=110.70 Aligned_cols=276 Identities=12% Similarity=0.018 Sum_probs=174.6
Q ss_pred chHHHHHHHHHHHhCCC---cEEEeccHHH-HH-HHHHHhcCCCCeEE-EcCCCccchHHHHHHhcccCCcEEEeeCC--
Q psy12791 59 PTRRNLERCIASLEEAK---HGLCYSSGLG-AV-TAVTHLLSAGDHII-SGDDVYGGTYRYFAQVAPKIGLEVDFVDL-- 130 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~---~~i~~~~G~~-al-~~~~~~~~~gd~vl-~~~~~y~~~~~~~~~~~~~~g~~v~~~~~-- 130 (393)
....++++.|.++++.+ +.+++++|.+ ++ .+.+.++.+||+++ +..-.+.+. .+...++.+| ++..+..
T Consensus 49 ~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~--r~~~ea~~~g-~v~~~~~~~ 125 (364)
T PRK12462 49 SLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSR--KAIGEASRVA-AMRVVWDGA 125 (364)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHH--HHHHHHHhcC-CceEecCcC
Confidence 45677888888899985 3555555555 47 66778889999655 444443332 3455566666 4433321
Q ss_pred -------CCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCC-cCcEEEEc
Q psy12791 131 -------RKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPW-GVDIVLYS 202 (393)
Q Consensus 131 -------~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~-~~di~~~S 202 (393)
.+++++ .+.++.+.|.+++-...||+..| ++.+.+ ++++|+|.+.+.+. .|++. ..|+++.+
T Consensus 126 ~~~~~~~p~~~~~--~~~~d~~~v~~t~NETstGv~~~-----~~~~~~-~~llvvD~sS~~~s--~pid~~~~dvi~ag 195 (364)
T PRK12462 126 ASGYRTLPSLAEL--DWDARAPFRHYVSNETVEGLQFP-----DAAGLP-DSPLIADMSSDFMS--RPFDVEAYGMVYAH 195 (364)
T ss_pred CCCCCcCCCHHHh--ccCCCCcEEEEccCCCCceEecC-----cccccC-CCeEEEEcCchhhC--CCCChHHccEEEee
Confidence 134444 33456789999999999999997 333446 89999999887543 34443 34999999
Q ss_pred ccccccCCCCceEEEEEecChHHHHHHHHHHH------------hcCCCCCHHHHHHHHhcc-----C--CHHHHHHHHH
Q psy12791 203 LTKYMNGHSDVVMGATVTNDDSLQARLKFLQN------------SMGVVPSPFDCWLVTRGL-----K--TLPCRLKEHE 263 (393)
Q Consensus 203 ~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~ 263 (393)
..|.+ |+|| ++.++.+ ++++++...... ....+++....+.+...+ + .++.+.+++.
T Consensus 196 sQKnl-gP~G--ltvvivs-~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~ 271 (364)
T PRK12462 196 AQKNL-GPAG--VTVAIIR-RALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINA 271 (364)
T ss_pred ccccC-CCCc--eEEEEEC-HHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHH
Confidence 99999 6999 7888887 777766532110 011223333333222221 2 4566677788
Q ss_pred HHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcc-eEEEEEcCCHHHHHHHHHhcCccccccccCCcccccc
Q psy12791 264 RGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSG-MLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLAD 342 (393)
Q Consensus 264 ~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~ 342 (393)
+.++.+.++++..+++... +. . + ...+. -+.|.+ .+++....|++..+..++..--|..
T Consensus 272 ~ka~~ly~~id~~~~~~~~--~~-~--~---------~~RS~mnv~f~~-~~~~l~~~f~~~a~~~gl~~lkGhr----- 331 (364)
T PRK12462 272 RKAAMLYATLDALNEVIDC--HA-H--R---------AARSTMNVAFRF-RQPRLDTLFKEQSTEAGFCGLSGHR----- 331 (364)
T ss_pred HHHHHHHHHHHhCCCcccC--CC-C--h---------hhcCcceEEEEc-CCHHHHHHHHHHHHHCCCccccCCc-----
Confidence 8888999999876642211 10 0 0 00112 266677 4778888999888765544322211
Q ss_pred CcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 343 LPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+.+|+|+--.-+.+.+++|.+-+++..
T Consensus 332 --------------------~vgg~Ras~yna~~~e~v~~L~~fm~~f~ 360 (364)
T PRK12462 332 --------------------SIGGIRASLYNAVSEQAVSRLCAFLKDFA 360 (364)
T ss_pred --------------------ccCceEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 13669999987788888999998887654
No 330
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.44 E-value=6.8e-11 Score=114.23 Aligned_cols=286 Identities=16% Similarity=0.129 Sum_probs=164.2
Q ss_pred CCCchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHHHh---c----CC-CCeEEEcCCCccchHHHHHHhcc-----
Q psy12791 56 SNNPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVTHL---L----SA-GDHIISGDDVYGGTYRYFAQVAP----- 119 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~~~---~----~~-gd~vl~~~~~y~~~~~~~~~~~~----- 119 (393)
+.++...+|.+.|++..+.. ...+.+||++|+ .++... . .+ ..+|+.-..+|++.......+..
T Consensus 94 ~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~ 173 (453)
T PRK06943 94 CTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFK 173 (453)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhh
Confidence 34567778888888877643 466778899987 544321 0 12 35788888888774311110000
Q ss_pred -cCC---cEEEeeCCC-----------------CHHHHHhhcC---CCCcEEEEec-CCCCcccccC----HHHHHHHHH
Q psy12791 120 -KIG---LEVDFVDLR-----------------KIENLIKYIK---PNTKMVWIEN-PTNPLMTVFD----VKAISAVVK 170 (393)
Q Consensus 120 -~~g---~~v~~~~~~-----------------d~~~l~~~l~---~~~~~v~l~~-p~nptG~~~~----~~~l~~l~~ 170 (393)
.++ ..+..++.. +++++++.+. +++.+|+++. .+...|.+.+ +++|.++|+
T Consensus 174 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~ 253 (453)
T PRK06943 174 DAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCD 253 (453)
T ss_pred cccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHH
Confidence 000 012222211 2456666663 4678999988 4777788775 899999999
Q ss_pred hCCCcEEEEeCccCcc-ccc-----CCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHH------HHhcC
Q psy12791 171 QHPDILLVLDNTFLTA-YYQ-----KSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFL------QNSMG 237 (393)
Q Consensus 171 ~~~~~~livDea~~~~-~~~-----~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~------~~~~~ 237 (393)
+| |+++|+||++..+ -.. .......|+++ ++|.++ .| +.+|.++++ +++.+.+... .....
T Consensus 254 ~~-gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt--~gKgl~--gG~~Pi~av~~~-~ei~~~~~~~~~~~~~~~~~T 327 (453)
T PRK06943 254 RY-GVHLIADEIAVGCGRTGTFFACEQAGVWPDFLC--LSKGIS--GGYLPLSLVLSR-DAIFAAFYDDDVTRGFLHSHS 327 (453)
T ss_pred Hc-CCEEEeechhhCCCCCcchhHHHhCCCCCCeEe--eehhhc--cCcccceEEEEc-HHHHHhhcccCccCCccCCCC
Confidence 99 9999999998763 111 11233578886 579995 35 469999987 7887766421 01111
Q ss_pred CCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH
Q psy12791 238 VVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA 315 (393)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
...++..+..+.+.++.+.+ ..++..+..+.+.+.|+++. .++. +.+.++.|.++.+.+..+.
T Consensus 328 ~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~-----~~~~----------v~~vrG~Gl~~gvel~~~~ 392 (453)
T PRK06943 328 YTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLA-----AHPQ----------VRHLRQRGTIFAFDVALDG 392 (453)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-----cCCC----------EEeEeccccEEEEEEccCC
Confidence 12467777666666654432 23334444445555554321 0111 1123566788888884221
Q ss_pred ----HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 316 ----EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 316 ----~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
....++...+...++-+.. ..+.+|+++.+..++++++.+.++|++.
T Consensus 393 ~~~~~~~~~i~~~~~~~Gll~~~----------------------------~g~~l~~~Ppl~it~~eid~~~~~l~~a 443 (453)
T PRK06943 393 DAARTFSRRFFEAALERELLLRP----------------------------IGTTVYLMPPYVLDDDEIAWLAERTRAT 443 (453)
T ss_pred CcchHHHHHHHHHHHHCCcEEEe----------------------------cCCEEEEeCCCcCCHHHHHHHHHHHHHH
Confidence 2234454444333322211 0245888877777777777666666543
No 331
>PRK07046 aminotransferase; Validated
Probab=99.44 E-value=6.6e-11 Score=114.21 Aligned_cols=212 Identities=13% Similarity=0.086 Sum_probs=134.1
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHhc---------ccCCc-
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQVA---------PKIGL- 123 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~---------~~~g~- 123 (393)
+++...+|.+.|++..+.+...+.+||++|. .++.. .....++|+.-...|++......... ...|.
T Consensus 113 ~~~~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~ 192 (453)
T PRK07046 113 PSEDAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQV 192 (453)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCC
Confidence 4566677888888887766788889999986 44432 23345678888888877432111110 01111
Q ss_pred -----EEEeeCCCCHHHHHhhcC-CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCc----cccc
Q psy12791 124 -----EVDFVDLRKIENLIKYIK-PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLT----AYYQ 189 (393)
Q Consensus 124 -----~v~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~----~~~~ 189 (393)
.+..++.+|++.+++.+. ++..+|+++..+...|.+.| ++++.++|+++ |+++|+||++.. +-.+
T Consensus 193 ~~~~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~-g~llI~DEV~tfr~g~Gg~~ 271 (453)
T PRK07046 193 HDLTATTRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRY-GTLLVIDETHTISSGPGGYT 271 (453)
T ss_pred ccccCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEEccccCccCCcchh
Confidence 245566679999999885 35788999888877788776 89999999999 999999999861 1111
Q ss_pred CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH------H-hc--CCCCCHHHHHHHHhccCCHH--HH
Q psy12791 190 KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ------N-SM--GVVPSPFDCWLVTRGLKTLP--CR 258 (393)
Q Consensus 190 ~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~------~-~~--~~~~~~~~~~~~~~~~~~~~--~~ 258 (393)
.......|+++ ++|.++ .|+.+|.++++ +++.+.+.... . .. ....++..+..+...++.+. ..
T Consensus 272 ~~~gv~PDi~t--~gK~lg--gG~Pi~av~g~-~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~ 346 (453)
T PRK07046 272 RAHGLEPDFLV--VGKPIA--GGVPCAVYGFS-AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAA 346 (453)
T ss_pred HHhCCCcccee--ehhhhc--CCCcceeeeeh-HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccH
Confidence 11223468875 789995 35779999987 78888764210 0 11 11235666665555544332 12
Q ss_pred HHHHHHHHHHHHHHHh
Q psy12791 259 LKEHERGSIEVAKFLE 274 (393)
Q Consensus 259 ~~~~~~~~~~l~~~l~ 274 (393)
.++..+..+.+.+.|+
T Consensus 347 ~~~~~~~g~~l~~~L~ 362 (453)
T PRK07046 347 YAHMLALAARLAAGLR 362 (453)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444445555554
No 332
>PRK07482 hypothetical protein; Provisional
Probab=99.43 E-value=6.9e-11 Score=114.54 Aligned_cols=304 Identities=14% Similarity=0.055 Sum_probs=170.5
Q ss_pred CeeeeCCCCCCCCCc---cccCCCCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHHh--c----C-C-CCeEEE
Q psy12791 37 TTFKQNTPGQPPQGF---EYSRSNNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTHL--L----S-A-GDHIIS 102 (393)
Q Consensus 37 ~~~~~~~~~~~~~~~---~y~~~~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~~--~----~-~-gd~vl~ 102 (393)
+.+.+++.+++.... .+..+.++...+|.+.|++.... +...+.+||++|+ .++... . . + ..+|+.
T Consensus 69 p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~ 148 (461)
T PRK07482 69 TEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIIS 148 (461)
T ss_pred HHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEE
Confidence 445555544433321 12234567778899999887643 3566778999987 544321 1 1 2 356887
Q ss_pred cCCCccchHHHHHHhc------ccCC---cEEEeeCCC------------------CHHHHHhhcC----CCCcEEEEec
Q psy12791 103 GDDVYGGTYRYFAQVA------PKIG---LEVDFVDLR------------------KIENLIKYIK----PNTKMVWIEN 151 (393)
Q Consensus 103 ~~~~y~~~~~~~~~~~------~~~g---~~v~~~~~~------------------d~~~l~~~l~----~~~~~v~l~~ 151 (393)
-...|++.......+. ..++ ..+..++.. +++.+++.+. +++.+|+++.
T Consensus 149 ~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EP 228 (461)
T PRK07482 149 RWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEP 228 (461)
T ss_pred ecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 7788876321111100 0011 112222111 2456666663 3578999988
Q ss_pred CCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcc-ccc-----CCCCCcCcEEEEcccccccCCCCc-eEEEEEe
Q psy12791 152 PTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTA-YYQ-----KSLPWGVDIVLYSLTKYMNGHSDV-VMGATVT 220 (393)
Q Consensus 152 p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~-~~~-----~~~~~~~di~~~S~sK~~~G~~G~-r~G~~~~ 220 (393)
.+...|.+.+ +++|.++|++| |+++|+||++..+ -.. .......|+++ ++|.++| |+ .+|.+++
T Consensus 229 vqg~gG~~~~~~~yl~~lr~lc~~~-giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~g--G~~Pi~av~~ 303 (461)
T PRK07482 229 VLGTGGIVPPPAGYWPAIQAVLKKY-DILLIADEVVTGFGRLGSMFGSDHYGIEPDLIT--VAKGLTS--AYAPLSGSIV 303 (461)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEeccccCCCcCcchhhHHhcCCCCCEEE--Ecccccc--Cccccceeee
Confidence 8877788875 88999999999 9999999999864 111 11233578886 6799952 42 5888888
Q ss_pred cChHHHHHHHHH-------HHhcCCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHh----hCCCcceEeCCCC
Q psy12791 221 NDDSLQARLKFL-------QNSMGVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLE----SHPCVKGVLHPGL 287 (393)
Q Consensus 221 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~----~~~~~~~v~~~~l 287 (393)
+ +++.+.+... ........+|..++.+...++.+.+ ..++..+..+.+.+.|+ .++.+.
T Consensus 304 ~-~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~------- 375 (461)
T PRK07482 304 G-EKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVG------- 375 (461)
T ss_pred c-HHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEE-------
Confidence 7 7777766421 0111223467777777666654432 22333333444444443 233222
Q ss_pred CCCcchHHHhhhcCCCcceEEEEEcCCH----------HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhH
Q psy12791 288 PSHPNHELAKSQWSGTSGMLSFYVNGGA----------EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETR 357 (393)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~ 357 (393)
+.++.|.++.+.+..+. ....++...+...++-...+
T Consensus 376 -----------~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---------------------- 422 (461)
T PRK07482 376 -----------EVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAM---------------------- 422 (461)
T ss_pred -----------EEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecC----------------------
Confidence 22556778888884211 11234444433322221100
Q ss_pred hhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 358 DALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 358 ~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.....+|+.+.+..++++++.+.+++++.
T Consensus 423 ----~~~~~i~~~Ppl~it~~ei~~~~~~l~~~ 451 (461)
T PRK07482 423 ----PHGDILGFAPPLVLTRAEADEIVAIAKDA 451 (461)
T ss_pred ----CCCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 01357888888888887777666666543
No 333
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.43 E-value=3.5e-11 Score=115.29 Aligned_cols=284 Identities=14% Similarity=0.087 Sum_probs=165.9
Q ss_pred CCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHH--hc-----CCCCeEEEcCCCccchHHHHHHhcc-------
Q psy12791 57 NNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTH--LL-----SAGDHIISGDDVYGGTYRYFAQVAP------- 119 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~--~~-----~~gd~vl~~~~~y~~~~~~~~~~~~------- 119 (393)
.++...+|.+.|++.... +...+.+||++|+ .++.. .. ....+|+.-..+|++.......+..
T Consensus 84 ~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~ 163 (428)
T PRK07986 84 THPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHS 163 (428)
T ss_pred CCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhh
Confidence 456778888899888754 3466778899986 44432 11 2245788888888763211111100
Q ss_pred cCC---cEEEeeCC-----------CCHHHHHhhcC---CCCcEEEEecC-CCCcccccC----HHHHHHHHHhCCCcEE
Q psy12791 120 KIG---LEVDFVDL-----------RKIENLIKYIK---PNTKMVWIENP-TNPLMTVFD----VKAISAVVKQHPDILL 177 (393)
Q Consensus 120 ~~g---~~v~~~~~-----------~d~~~l~~~l~---~~~~~v~l~~p-~nptG~~~~----~~~l~~l~~~~~~~~l 177 (393)
.++ ..+..++. .|++++++.+. ++..+|+++.. +...|...+ +++|.++|+++ |+++
T Consensus 164 ~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~-g~lL 242 (428)
T PRK07986 164 LYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDRE-GILL 242 (428)
T ss_pred ccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCEE
Confidence 000 11122221 24566776664 35678888874 666676553 89999999999 9999
Q ss_pred EEeCccCcc-ccc-----CCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHHH-----HhcCCCCCHHHH
Q psy12791 178 VLDNTFLTA-YYQ-----KSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFLQ-----NSMGVVPSPFDC 245 (393)
Q Consensus 178 ivDea~~~~-~~~-----~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 245 (393)
|+||++..+ ... .......|+++ ++|.++ .| +.+|.++++ +++.+.+.... .......+|..+
T Consensus 243 I~DEv~tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~--gG~~p~~av~~~-~~i~~~~~~~~~~~~~~~~T~~g~p~~~ 317 (428)
T PRK07986 243 IADEIATGFGRTGKLFACEHAGIAPDILC--LGKALT--GGTMTLSATLTT-REVAETISNGEAGCFMHGPTFMGNPLAC 317 (428)
T ss_pred EEeccccCCccCCCeeeecccCCCCCEEE--echhhh--CCcccCcchhch-HHHHHHhhcCCCCccccCCCCCcCHHHH
Confidence 999998643 111 11223467774 889994 35 457887887 78888775311 111112457777
Q ss_pred HHHHhccCCHHH--HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHH
Q psy12791 246 WLVTRGLKTLPC--RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLE 323 (393)
Q Consensus 246 ~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
+.+...++.+++ ..++..+..+.+.+.|+.+.. ++. +.+.++.|.++.+.+. ++.....+.+
T Consensus 318 aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~-----~~~----------i~~vRg~Gl~~~ve~~-~~~~~~~~~~ 381 (428)
T PRK07986 318 AVANASLSLLESGDWQQQVAAIEAQLREELAPLRD-----APM----------VADVRVLGAIGVVETT-RPVNMAALQR 381 (428)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-----CCC----------EEeEeccceEEEEEeC-CcccHHHHHH
Confidence 666666554432 344455555555555553210 111 1223556778888884 3333455555
Q ss_pred hcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 324 SLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 324 ~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.+...++-+.. ..+.||+.+.+..++++++.+.++|.+.
T Consensus 382 ~l~~~Gl~~~~----------------------------~g~~i~~~Ppl~it~~ei~~~~~~l~~~ 420 (428)
T PRK07986 382 FFVEQGVWIRP----------------------------FGKLIYLMPPYIILPEQLQRLTAAVNRA 420 (428)
T ss_pred HHHHCCcEEEe----------------------------cCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 55443332211 0257899888888888888877777654
No 334
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.43 E-value=9.1e-11 Score=114.45 Aligned_cols=286 Identities=16% Similarity=0.124 Sum_probs=163.3
Q ss_pred CCchHHHHHHHHHHHhC-CC--cEEEeccHHHHH-HHHHHhc------C-C-CCeEEEcCCCccchHHHHHHhcc-----
Q psy12791 57 NNPTRRNLERCIASLEE-AK--HGLCYSSGLGAV-TAVTHLL------S-A-GDHIISGDDVYGGTYRYFAQVAP----- 119 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~-~~--~~i~~~~G~~al-~~~~~~~------~-~-gd~vl~~~~~y~~~~~~~~~~~~----- 119 (393)
..+...+|.+.|.+.+. .+ ...+.+||++|. .++.... . + .++|+..+..|++....-..+..
T Consensus 131 ~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~ 210 (504)
T PLN02760 131 TTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALH 210 (504)
T ss_pred CcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhc
Confidence 45667788888888753 32 467789999987 5443221 1 2 25688888778764311111010
Q ss_pred -cCCc---EEEeeCCC----------C--------HHHHHhhcC----CCCcEEEEecCCCCcccccC----HHHHHHHH
Q psy12791 120 -KIGL---EVDFVDLR----------K--------IENLIKYIK----PNTKMVWIENPTNPLMTVFD----VKAISAVV 169 (393)
Q Consensus 120 -~~g~---~v~~~~~~----------d--------~~~l~~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~ 169 (393)
.++. .+..++.+ + .+++++.+. +++.+|+++......|.+.| +++|.++|
T Consensus 211 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc 290 (504)
T PLN02760 211 QKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVL 290 (504)
T ss_pred cCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHH
Confidence 1110 12222211 1 134555542 34778999988888898888 99999999
Q ss_pred HhCCCcEEEEeCccCcc-ccc-----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH-------HHhc
Q psy12791 170 KQHPDILLVLDNTFLTA-YYQ-----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL-------QNSM 236 (393)
Q Consensus 170 ~~~~~~~livDea~~~~-~~~-----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~-------~~~~ 236 (393)
+++ |+++|+||++..+ ... ......+|++ +++|.++| ..+.+|.++++ +++.+.+... ....
T Consensus 291 ~~~-g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDiv--tlgK~lgg-G~~PigAv~~~-~~i~d~~~~~~~~~~~~~h~~ 365 (504)
T PLN02760 291 KKY-DILFIADEVICAFGRLGTMFGCDKYNIKPDLV--SLAKALSS-AYMPIGAVLVS-PEISDVIHSQSNKLGSFAHGF 365 (504)
T ss_pred HHc-CCEEEecchhhCCcccchhhHHHhcCCCCcEE--EecccccC-CccccceEeec-HHHHhhhhcccccccCcccCC
Confidence 999 9999999999643 211 1122346765 57899953 11358888887 8888876421 1111
Q ss_pred CCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC
Q psy12791 237 GVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG 314 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
....+|..+..+.+.++.+++ ..++..+....+.+.|+.+.. ++. +.+.+|.|.++.+.+..+
T Consensus 366 T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~-----~~~----------v~~vrG~Gl~~gie~~~~ 430 (504)
T PLN02760 366 TYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSG-----SPI----------IGEIRGTGLILGTEFVDN 430 (504)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhc-----CCC----------eeeEEeCceEEEEEEecC
Confidence 223367777777666654432 344444555555555554210 111 122356678888887421
Q ss_pred H----------HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHH
Q psy12791 315 A----------EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLD 384 (393)
Q Consensus 315 ~----------~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~ 384 (393)
. +....+.+.+...++-+.. ....+|+++.+..++++++.+.
T Consensus 431 ~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~----------------------------~g~~lrl~Ppl~it~eeid~~~ 482 (504)
T PLN02760 431 KSPNDPFPAEWGVGAYFGAECKKRGMLVRV----------------------------AGDNIMMSPPLIITPEEVDELI 482 (504)
T ss_pred CcccccccchhHHHHHHHHHHHhCCcEEEe----------------------------cCCEEEEECCCCCCHHHHHHHH
Confidence 1 1233444444332322110 1246899988777777777776
Q ss_pred HHHHHh
Q psy12791 385 QALRKA 390 (393)
Q Consensus 385 ~al~~~ 390 (393)
+++.+.
T Consensus 483 ~~l~~a 488 (504)
T PLN02760 483 SIYGKA 488 (504)
T ss_pred HHHHHH
Confidence 666543
No 335
>PLN02452 phosphoserine transaminase
Probab=99.43 E-value=1.9e-11 Score=114.39 Aligned_cols=277 Identities=13% Similarity=0.021 Sum_probs=176.7
Q ss_pred chHHHHHHHHHHHhCCC---cEEEe-ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC--C-
Q psy12791 59 PTRRNLERCIASLEEAK---HGLCY-SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD--L- 130 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~---~~i~~-~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~--~- 130 (393)
....+.++.|.++++.+ +.+++ ++|+.++ .++..++.+||++++....+.+. .+.+.++.+|...+... .
T Consensus 52 ~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~--r~~~~a~~~g~~~~~~~~~~~ 129 (365)
T PLN02452 52 SIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSK--KAAKEAKKYCKTNVIASGKDE 129 (365)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHH--HHHHHHHHhCCCcEEEecCCC
Confidence 45678888999999975 35555 4445567 77778888999887766555443 35566777776443331 1
Q ss_pred -----CCHHHHHhhcCCCCcEEEEecCCCCcccc-cCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCC-cCcEEEEcc
Q psy12791 131 -----RKIENLIKYIKPNTKMVWIENPTNPLMTV-FDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPW-GVDIVLYSL 203 (393)
Q Consensus 131 -----~d~~~l~~~l~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~-~~di~~~S~ 203 (393)
.++++++ ..++.+.|.+++-...||+. .|++++. ++++|+|.+.+.+.. +++. ..++...|.
T Consensus 130 ~~~~~~~~~~~~--~~~~~~~v~~~hnETstGv~~~~~~~i~-------~~~lvVDa~Ss~g~~--pidv~~~~v~~~sa 198 (365)
T PLN02452 130 KYTKIPSVSEWE--LTPDAKFVHICANETIHGVEFKDYPDVG-------NVPLVADMSSNFLSK--PVDVSKYGVIYAGA 198 (365)
T ss_pred CCCCCCChHHcC--CCCCCcEEEECCCCCCCcEecCcccccC-------CCeEEEECCccccCc--ccCHHHcCEEEEec
Confidence 1445442 23468899999999999995 6665542 479999999986654 4432 233455799
Q ss_pred cccccCCCCceEEEEEecChHHHHHHHHHHH------------hcCCCCCHHHHHHHHhccC------CHHHHHHHHHHH
Q psy12791 204 TKYMNGHSDVVMGATVTNDDSLQARLKFLQN------------SMGVVPSPFDCWLVTRGLK------TLPCRLKEHERG 265 (393)
Q Consensus 204 sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 265 (393)
+|.+ |++| +|+++.+ +++++++..... .+-.+++....+.+...++ .++.+.++..+.
T Consensus 199 qK~l-GP~G--l~~v~vr-~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~ 274 (365)
T PLN02452 199 QKNV-GPSG--VTIVIIR-KDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRK 274 (365)
T ss_pred cccc-CCCC--eEEEEEc-HHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 9999 7999 8999998 777766532110 0011222222222222222 355667777888
Q ss_pred HHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcc
Q psy12791 266 SIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPA 345 (393)
Q Consensus 266 ~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~ 345 (393)
++.+.++|++.+++. .+... +. .+ ....+.|.++ +.+..+.|++.++..++....|..
T Consensus 275 a~~l~~~l~~~~G~y---~~~~~--~~-------~r-s~~~vsF~~~-~~~~~~~f~~~~~~~g~~~~~G~r-------- 332 (365)
T PLN02452 275 ADLLYDAIDESNGFY---VCPVE--KS-------VR-SLMNVPFTLG-GSELEAEFVKEAAKAGMVQLKGHR-------- 332 (365)
T ss_pred HHHHHHHHHhCCCcc---cCCCC--hH-------Hh-CCeEEEEEcC-CchhHHHHHHHHHHCCCcccCCcc--------
Confidence 889999998766541 11000 00 01 1346888885 446888999998876655544321
Q ss_pred cccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 346 EMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.-+-+|+|+=-.-+.+.+++|.+.+++..
T Consensus 333 -----------------~~gg~R~s~yna~~~~~v~~L~~~m~~f~ 361 (365)
T PLN02452 333 -----------------SVGGMRASIYNAMPLAGVEKLVAFMKDFQ 361 (365)
T ss_pred -----------------ccCceEEECcCCCCHHHHHHHHHHHHHHH
Confidence 01239999987788889999999988764
No 336
>PRK12403 putative aminotransferase; Provisional
Probab=99.43 E-value=6.2e-11 Score=114.81 Aligned_cols=212 Identities=17% Similarity=0.161 Sum_probs=124.6
Q ss_pred CCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHHh--c-----CCCCe-EEEcCCCccchHHHHHHhcc-----c
Q psy12791 57 NNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTHL--L-----SAGDH-IISGDDVYGGTYRYFAQVAP-----K 120 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~~--~-----~~gd~-vl~~~~~y~~~~~~~~~~~~-----~ 120 (393)
..+...+|.++|+++.+. +..++++||++|+ .++... . ++++. |+.-..+|++....-..+.. .
T Consensus 96 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~ 175 (460)
T PRK12403 96 THPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHE 175 (460)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccc
Confidence 356678899999998763 4688889999997 544322 1 23344 44445566653211111100 0
Q ss_pred CC---cEEEeeCCC-----------------CHHHHHhhcC----CCCcEEEEecCCCCcccccC----HHHHHHHHHhC
Q psy12791 121 IG---LEVDFVDLR-----------------KIENLIKYIK----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQH 172 (393)
Q Consensus 121 ~g---~~v~~~~~~-----------------d~~~l~~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~ 172 (393)
.+ -.+..+|.. +.+++++.+. +++.+|+++..+...|.+.+ +++|.++|++|
T Consensus 176 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~ 255 (460)
T PRK12403 176 MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY 255 (460)
T ss_pred cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc
Confidence 00 012233211 1244544441 35778899888888898887 99999999999
Q ss_pred CCcEEEEeCccCcc-ccc-----CCCCCcCcEEEEcccccccCCCCc-eEEEEEecChHHHHHHHHHH----HhcCCCCC
Q psy12791 173 PDILLVLDNTFLTA-YYQ-----KSLPWGVDIVLYSLTKYMNGHSDV-VMGATVTNDDSLQARLKFLQ----NSMGVVPS 241 (393)
Q Consensus 173 ~~~~livDea~~~~-~~~-----~~~~~~~di~~~S~sK~~~G~~G~-r~G~~~~~~~~~~~~~~~~~----~~~~~~~~ 241 (393)
|+++|+||++..+ -.. .......|+++ ++|.++| |. .+|.++++ +++.+.+.... .......+
T Consensus 256 -g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lgg--G~~Piga~v~~-~~i~~~~~~~~~~~~~~~T~~gn 329 (460)
T PRK12403 256 -DVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTS--GYVPMGGLVLS-KRIAEALVEQGGVFAHGLTYSGH 329 (460)
T ss_pred -CCEEEEeccccCCCcCchhhhhhhcCCCCCeEE--Ecccccc--cccceEEEEEC-HHHHHHHhcCCCccccCCCCCCC
Confidence 9999999999753 111 11223468886 8899952 42 58888887 77777664211 11122356
Q ss_pred HHHHHHHHhccCCHHH--HHHHHH-HHHHHHHHHHh
Q psy12791 242 PFDCWLVTRGLKTLPC--RLKEHE-RGSIEVAKFLE 274 (393)
Q Consensus 242 ~~~~~~~~~~~~~~~~--~~~~~~-~~~~~l~~~l~ 274 (393)
|..++.+.+.++.+++ ..++.. +..+.+.+.|+
T Consensus 330 Pl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~ 365 (460)
T PRK12403 330 PVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLR 365 (460)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 7777777666655432 233442 34445555444
No 337
>PRK06105 aminotransferase; Provisional
Probab=99.42 E-value=1e-10 Score=113.28 Aligned_cols=216 Identities=15% Similarity=0.114 Sum_probs=129.3
Q ss_pred CCCCchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHHHh--c----C-C-CCeEEEcCCCccchHHHHHHhcc----
Q psy12791 55 RSNNPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVTHL--L----S-A-GDHIISGDDVYGGTYRYFAQVAP---- 119 (393)
Q Consensus 55 ~~~~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~~~--~----~-~-gd~vl~~~~~y~~~~~~~~~~~~---- 119 (393)
.+.++...+|.+.|++....+ ...+.+||++|+ .++... . . + ..+|+.....|++.......+..
T Consensus 88 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~ 167 (460)
T PRK06105 88 HKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNN 167 (460)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCccc
Confidence 345677788999999887543 466678899987 444321 1 1 2 34677777777764311111000
Q ss_pred --cCC---cEEEeeCCC------------------CHHHHHhhcC----CCCcEEEEecCCCCcccccC----HHHHHHH
Q psy12791 120 --KIG---LEVDFVDLR------------------KIENLIKYIK----PNTKMVWIENPTNPLMTVFD----VKAISAV 168 (393)
Q Consensus 120 --~~g---~~v~~~~~~------------------d~~~l~~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l 168 (393)
.++ ..+..++.. ..+++++.+. ++..+|+++..+...|...+ +++|.++
T Consensus 168 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~l 247 (460)
T PRK06105 168 HRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAV 247 (460)
T ss_pred ccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHH
Confidence 011 112223221 1345666552 35788999988888888887 9999999
Q ss_pred HHhCCCcEEEEeCccCcc-ccc-----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH-------Hh
Q psy12791 169 VKQHPDILLVLDNTFLTA-YYQ-----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ-------NS 235 (393)
Q Consensus 169 ~~~~~~~~livDea~~~~-~~~-----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~-------~~ 235 (393)
|++| |+++|+||++..+ ... .......|++ +++|.++| ..+.+|+++++ +++.+.+.... ..
T Consensus 248 c~~~-~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~--~~gK~lgg-G~~P~~av~~~-~~i~~~~~~~~~~~~~~~h~ 322 (460)
T PRK06105 248 LRKY-DILLVADEVICGFGRTGNMFGCETFGIKPDIL--VMSKQLSS-SYQPLSAVLMN-EKVYDPIADESGKIGTFGHG 322 (460)
T ss_pred HHHc-CCeEEEeccccCCCcCchhhhHHhcCCCCCee--eeeccccc-CcccceEEEEc-HHHHHHHhcccccCcccccC
Confidence 9999 9999999999642 211 1122346777 57799953 22468999987 78877664311 11
Q ss_pred cCCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhh
Q psy12791 236 MGVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLES 275 (393)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~ 275 (393)
.....+|..+..+.+.++.+.+ ..++..+..+.+.+.|++
T Consensus 323 ~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~ 364 (460)
T PRK06105 323 FTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRA 364 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 2224567777766666655432 344444455555555543
No 338
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.42 E-value=7.8e-11 Score=114.07 Aligned_cols=285 Identities=13% Similarity=0.099 Sum_probs=161.8
Q ss_pred CCCchHHHHHHHHHHHhCCC-----cEEEe-ccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHhccc------
Q psy12791 56 SNNPTRRNLERCIASLEEAK-----HGLCY-SSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQVAPK------ 120 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~-----~~i~~-~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~~~------ 120 (393)
+.++...+|.++|.+..... ..+++ +||++|+ .++.. ......+|+.-...|++.......+...
T Consensus 103 ~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~ 182 (464)
T PRK06938 103 LTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKP 182 (464)
T ss_pred cCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCcccccc
Confidence 45667777888888765422 23354 5999987 44432 2233457888788887743222211100
Q ss_pred CC---cEEEeeCCC-----------------CHHHHHhhcCC------CCcEEEEecCCCCcccccC----HHHHHHHHH
Q psy12791 121 IG---LEVDFVDLR-----------------KIENLIKYIKP------NTKMVWIENPTNPLMTVFD----VKAISAVVK 170 (393)
Q Consensus 121 ~g---~~v~~~~~~-----------------d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~----~~~l~~l~~ 170 (393)
++ ..+..++.. +++.+++.+.+ ++.+|+++..+...|.+.| ++++.++|+
T Consensus 183 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~ 262 (464)
T PRK06938 183 LGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITE 262 (464)
T ss_pred CCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHH
Confidence 00 123333321 14556666642 4788999888877788775 899999999
Q ss_pred hCCCcEEEEeCccCccc------ccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHH
Q psy12791 171 QHPDILLVLDNTFLTAY------YQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFD 244 (393)
Q Consensus 171 ~~~~~~livDea~~~~~------~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (393)
++ |+++|.||++..+- .........|+++ ++|.++ .|+.+|.++++ +++ +.+...........++..
T Consensus 263 ~~-giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gKglg--gG~PlsAv~~~-~~~-~~~~~~~~~~T~~gnpla 335 (464)
T PRK06938 263 EA-GIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVV--LSKAIG--GSLPLAVVVYR-EWL-DTWQPGAHAGTFRGNQMA 335 (464)
T ss_pred Hc-CCEEEEeccccCCCcCcHHHHHHhcCCCCCEEE--eecccc--CCCceEEEeeh-hHh-hccCCCCCCCCCCcCHHH
Confidence 99 99999999988641 1112234578886 579995 36789999987 554 433211111122345677
Q ss_pred HHHHHhccCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC----
Q psy12791 245 CWLVTRGLKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG---- 314 (393)
Q Consensus 245 ~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 314 (393)
+..+.+.++.+.+ ..++..+..+.+.+.|++ +|.+. +.+|.|.++.+.+..+
T Consensus 336 ~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~------------------~VrG~Glm~gie~~~~~~~~ 397 (464)
T PRK06938 336 MAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLG------------------DVRGRGLMLGVEIVDPQGEP 397 (464)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCee------------------eeeccceEEEEEeccCcccc
Confidence 7666666654432 223333333344444432 22222 2356678888888421
Q ss_pred ---------HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHH
Q psy12791 315 ---------AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQ 385 (393)
Q Consensus 315 ---------~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~ 385 (393)
.+....+...+...++.+..+ |...+.||+.+.+..++++++.+.+
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-------------------------g~~~~~l~~~Ppl~it~~eid~~~~ 452 (464)
T PRK06938 398 DALGHPPANGELASLIQRECLRRGLILELG-------------------------GRHGSVVRFLPPLIITAEQIDEVAE 452 (464)
T ss_pred cccccCCccHHHHHHHHHHHHHCCeEEeec-------------------------CCCCCEEEEECCCccCHHHHHHHHH
Confidence 122344444443333322111 1114678998888888888877777
Q ss_pred HHHHh
Q psy12791 386 ALRKA 390 (393)
Q Consensus 386 al~~~ 390 (393)
++++.
T Consensus 453 ~l~~~ 457 (464)
T PRK06938 453 IFAEA 457 (464)
T ss_pred HHHHH
Confidence 66544
No 339
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.41 E-value=3.7e-11 Score=115.25 Aligned_cols=283 Identities=12% Similarity=0.081 Sum_probs=163.3
Q ss_pred CCCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHHh--c-----CC-CCeEEEcCCCccchHHHHHHhcc-----
Q psy12791 56 SNNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTHL--L-----SA-GDHIISGDDVYGGTYRYFAQVAP----- 119 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~~--~-----~~-gd~vl~~~~~y~~~~~~~~~~~~----- 119 (393)
+.++...+|.++|++.... +...+.+||++|+ .++... . ++ ..+|+.-...|++.......+..
T Consensus 84 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~ 163 (429)
T PRK06173 84 FTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGM 163 (429)
T ss_pred cCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhh
Confidence 3466778888999887643 3577778899987 444221 1 12 35688888888763211100000
Q ss_pred --cCC---cEEEeeCCC-----------CHHHHHhhcC---CCCcEEEEecC-CCCcccccC----HHHHHHHHHhCCCc
Q psy12791 120 --KIG---LEVDFVDLR-----------KIENLIKYIK---PNTKMVWIENP-TNPLMTVFD----VKAISAVVKQHPDI 175 (393)
Q Consensus 120 --~~g---~~v~~~~~~-----------d~~~l~~~l~---~~~~~v~l~~p-~nptG~~~~----~~~l~~l~~~~~~~ 175 (393)
.++ ..+..+|.. +++.+++.+. +++.+|+++.. +...|...+ +++|.++|++| |+
T Consensus 164 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~-g~ 242 (429)
T PRK06173 164 HGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY-GV 242 (429)
T ss_pred hhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc-CC
Confidence 000 012233321 3555666663 45788999885 777788765 89999999999 99
Q ss_pred EEEEeCccCccccc-------CCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHH-----HHhcCCCCCH
Q psy12791 176 LLVLDNTFLTAYYQ-------KSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFL-----QNSMGVVPSP 242 (393)
Q Consensus 176 ~livDea~~~~~~~-------~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 242 (393)
++|+||++.. +.. .......|+++ ++|.++ .| +.++.++.+ +++.+.+... ........+|
T Consensus 243 llI~DEv~tG-~GrtG~~~a~~~~gv~PDiv~--~gK~l~--gG~~p~~a~~~~-~~i~~~~~~~~~~~~~~~~T~~g~p 316 (429)
T PRK06173 243 LLIFDEIATG-FGRTGKLFALEHAGVVPDIMC--IGKALT--GGYLTLSATITT-EAIAQTICSGEAKCFMHGPTFMANP 316 (429)
T ss_pred eEEecchhcC-CCcCCcchHHHhcCCCCCEEE--eehhhh--CCccccceEEec-HHHHHHHhcCCCCccccCCCCCcCH
Confidence 9999999954 221 11223467776 889994 34 347888877 7777766321 1111122457
Q ss_pred HHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHH
Q psy12791 243 FDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRI 320 (393)
Q Consensus 243 ~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
..+..+...++.+.+ ..++..+..+.+.+.|+.... ++. +.+.++.|.++.+.+. ++.....
T Consensus 317 ~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~-----~~~----------v~~vRg~Gl~~~iel~-~~~~~~~ 380 (429)
T PRK06173 317 LACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAAE-----FDS----------VAEVRVLGAIGVVEMK-EPVNMAT 380 (429)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-----CCC----------eeeeeccceEEEEEeC-CcccHHH
Confidence 777776666655432 344555555566666653211 111 0112445778889884 4434455
Q ss_pred HHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 321 FLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 321 ~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
+.+.+...++.+... .+.|||.+.+.-++++++.+.++|++
T Consensus 381 i~~~l~e~Gi~v~~~----------------------------g~~l~~~Ppl~it~~ei~~~~~~l~~ 421 (429)
T PRK06173 381 LQPRFVEHGIWVRPF----------------------------GKLVYIMPPFIISPDELSQLTSGLLR 421 (429)
T ss_pred HHHHHHHCCeEEEec----------------------------CCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 655554434332110 24677777777666666666655554
No 340
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=1.3e-10 Score=112.54 Aligned_cols=288 Identities=16% Similarity=0.134 Sum_probs=158.7
Q ss_pred CCCCchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHH--HhcCCCCeEEEcCCCccchHHHHHHhccc------CC-
Q psy12791 55 RSNNPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVT--HLLSAGDHIISGDDVYGGTYRYFAQVAPK------IG- 122 (393)
Q Consensus 55 ~~~~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~--~~~~~gd~vl~~~~~y~~~~~~~~~~~~~------~g- 122 (393)
++.++...+|.++|+++.+.. ...+.+||++|+ .++. .......+|+.-...|++.......+... ++
T Consensus 109 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~ 188 (459)
T PRK06082 109 RFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGP 188 (459)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCC
Confidence 456778889999999987543 466667788887 4432 12233467877777776643111111100 00
Q ss_pred --cEEEeeCC--------CC--------HHHHHhhcC--CCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEE
Q psy12791 123 --LEVDFVDL--------RK--------IENLIKYIK--PNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVL 179 (393)
Q Consensus 123 --~~v~~~~~--------~d--------~~~l~~~l~--~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~liv 179 (393)
..+..++. .+ ++.+++.+. +++.+|+++..++..+.+.| +++|.++|+++ |+++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~-g~llI~ 267 (459)
T PRK06082 189 LMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKH-NVLLII 267 (459)
T ss_pred CCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHc-CCEEEE
Confidence 01222221 11 244666664 35778888888776433445 89999999999 999999
Q ss_pred eCccCcc-ccc-----CCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Q psy12791 180 DNTFLTA-YYQ-----KSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGL 252 (393)
Q Consensus 180 Dea~~~~-~~~-----~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (393)
||++..+ -.. .......|+++ ++|.++| | +.+|.++++ +++.+.............+|..+..+.+.+
T Consensus 268 DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~g--G~~P~~av~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L 342 (459)
T PRK06082 268 DEIPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGG--GLVPIAAMITK-DKYNTAAQISLGHYTHEKSPLGCAAALATI 342 (459)
T ss_pred echhhCCCccchhhHhHhhCCCCCEEE--ecccccC--CCCcceEEEEc-HHHHhhccCCCCCCCCCcCHHHHHHHHHHH
Confidence 9998853 111 11223578886 7899952 4 468888887 665543321000112234677766666665
Q ss_pred CCHHH--HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH-------HHHHHHHH
Q psy12791 253 KTLPC--RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA-------EETRIFLE 323 (393)
Q Consensus 253 ~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 323 (393)
+.+.+ ..++..+..+.+.+.|+++.. .++. +.+.+|.|.++.+.+..+. +....+..
T Consensus 343 ~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~----------i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~ 408 (459)
T PRK06082 343 EVIEQEGLLEKVKADSQFMRERLLEMKA----KYPL----------IGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLY 408 (459)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHh----hCCC----------eeeeeeccceeEEEEccCccccCccHHHHHHHHH
Confidence 54432 334444445555555543210 0010 1123556788888884211 22333433
Q ss_pred hcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 324 SLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 324 ~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
.+...++-+.. ...+.+|+++.+..++++++.+.+++++
T Consensus 409 ~~~~~Gvl~~~---------------------------~~~~~i~~~Ppl~it~~eid~~~~~l~~ 447 (459)
T PRK06082 409 RCLNNGLSFKV---------------------------SQGNVIQLSPPLIITREELTQALAILEE 447 (459)
T ss_pred HHHhCCCEEEe---------------------------cCCCEEEEeCCCccCHHHHHHHHHHHHH
Confidence 33222221110 0146789988777666666666665553
No 341
>PRK06062 hypothetical protein; Provisional
Probab=99.40 E-value=1.7e-10 Score=111.53 Aligned_cols=284 Identities=14% Similarity=0.150 Sum_probs=164.7
Q ss_pred CCCCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHhcc----------
Q psy12791 55 RSNNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQVAP---------- 119 (393)
Q Consensus 55 ~~~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~~---------- 119 (393)
.+.++...+|.++|+++... +...+.+||++|. .++.. ......+|+.....|++..........
T Consensus 91 ~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~ 170 (451)
T PRK06062 91 AHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTG 170 (451)
T ss_pred ccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCC
Confidence 34567778899999887643 3567778889887 44432 223345788888888764322211110
Q ss_pred cCCcEEEeeCC---------CC-------HHHHHhhcC----CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCc
Q psy12791 120 KIGLEVDFVDL---------RK-------IENLIKYIK----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDI 175 (393)
Q Consensus 120 ~~g~~v~~~~~---------~d-------~~~l~~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~ 175 (393)
..|......|. +| ++++++.+. +++.+|+++..+...|.+.| +++|.++|+++ |+
T Consensus 171 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~-g~ 249 (451)
T PRK06062 171 RAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRH-GI 249 (451)
T ss_pred CCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc-CC
Confidence 01111111111 12 456666663 34789999988888898888 99999999999 99
Q ss_pred EEEEeCccCccc-c-----cCCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHH--HHhcCCCCCHHHHH
Q psy12791 176 LLVLDNTFLTAY-Y-----QKSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFL--QNSMGVVPSPFDCW 246 (393)
Q Consensus 176 ~livDea~~~~~-~-----~~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 246 (393)
++|+||++..+- . ........|++ +++|.++| | +.+|.++++ +++.+.+... ........+|..+.
T Consensus 250 lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~--t~gK~lgg--G~~Pigav~~~-~~i~~~~~~~~~~~~~T~~gnpl~~A 324 (451)
T PRK06062 250 VLIADEVMAGFGRTGKWFAIEHFGVVPDLI--TFAKGVNS--GYVPLGGVAIS-EAIAATFADRPYPGGLTYSGHPLACA 324 (451)
T ss_pred EEEeeccccCCCcCcHHHHHHhcCCCCCee--eechhhhc--CCcCcEEEEEc-HHHHHHhccCCCCCCCCCCCCHHHHH
Confidence 999999998631 1 11122346766 57899952 4 258888887 6787766421 11111223577777
Q ss_pred HHHhccCCHHH--HHHHHHHHH-HHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH----
Q psy12791 247 LVTRGLKTLPC--RLKEHERGS-IEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA---- 315 (393)
Q Consensus 247 ~~~~~~~~~~~--~~~~~~~~~-~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 315 (393)
.+.+.++.+++ ..++..+.. ..+.+.|++ ++.+. +.++.|.++.|.+..+.
T Consensus 325 aa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~------------------~vrG~Gl~~gve~~~~~~~~~ 386 (451)
T PRK06062 325 AAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVG------------------EVRGLGVFWALELVADRETRE 386 (451)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEE------------------eEeccccEEEEEEcccccccC
Confidence 66666655432 122222222 233334432 22221 22455677777773211
Q ss_pred ---------HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHH
Q psy12791 316 ---------EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQA 386 (393)
Q Consensus 316 ---------~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a 386 (393)
.....+.+.+...++-.. ...+.+|+++.+..++++++.+.++
T Consensus 387 ~~~~~~~~~~~~~~~~~~l~~~Gvl~~----------------------------~~~~~lrl~ppl~~t~~eid~~~~~ 438 (451)
T PRK06062 387 PLAPYGASSAAMAAVKAACKERGLLPF----------------------------VNGNRIHVVPPCTVTEDEVREGLAI 438 (451)
T ss_pred CCcccchhhHHHHHHHHHHHHCCcEEe----------------------------ecCCEEEEECCccCCHHHHHHHHHH
Confidence 123444444443332110 0136799999888888888777777
Q ss_pred HHHh
Q psy12791 387 LRKA 390 (393)
Q Consensus 387 l~~~ 390 (393)
+++.
T Consensus 439 l~~~ 442 (451)
T PRK06062 439 LDAA 442 (451)
T ss_pred HHHH
Confidence 7654
No 342
>PRK07481 hypothetical protein; Provisional
Probab=99.39 E-value=2.4e-10 Score=110.47 Aligned_cols=287 Identities=16% Similarity=0.083 Sum_probs=162.2
Q ss_pred CCCchHHHHHHHHHHHhC---CCcEEEeccHHHHH-HHHHH---hc----CCC-CeEEEcCCCccchHHHHHHhccc---
Q psy12791 56 SNNPTRRNLERCIASLEE---AKHGLCYSSGLGAV-TAVTH---LL----SAG-DHIISGDDVYGGTYRYFAQVAPK--- 120 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~---~~~~i~~~~G~~al-~~~~~---~~----~~g-d~vl~~~~~y~~~~~~~~~~~~~--- 120 (393)
+.++...++.++|++..+ .+...+.+||++|+ .++.. .. ++| .+|+.-...|++.......+...
T Consensus 83 ~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~ 162 (449)
T PRK07481 83 TTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVF 162 (449)
T ss_pred cCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccc
Confidence 356777889999998874 23466778889887 44432 11 123 56888888887743211111000
Q ss_pred ---CC---cEEEeeC--------CC--CHHH--------HHhhcC----CCCcEEEEecCCCCcccccC----HHHHHHH
Q psy12791 121 ---IG---LEVDFVD--------LR--KIEN--------LIKYIK----PNTKMVWIENPTNPLMTVFD----VKAISAV 168 (393)
Q Consensus 121 ---~g---~~v~~~~--------~~--d~~~--------l~~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l 168 (393)
++ ..+..++ .+ |++. +++.+. +++.+|+++..+...|.+.+ +++|.++
T Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~l 242 (449)
T PRK07481 163 RRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREV 242 (449)
T ss_pred ccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHH
Confidence 00 1122221 11 3333 233332 45889999988888888776 8999999
Q ss_pred HHhCCCcEEEEeCccCccc-c-----cCCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHH-------HH
Q psy12791 169 VKQHPDILLVLDNTFLTAY-Y-----QKSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFL-------QN 234 (393)
Q Consensus 169 ~~~~~~~~livDea~~~~~-~-----~~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~-------~~ 234 (393)
|+++ |+++|.||++..+- . ........|+++ ++|.++| | +.+|.++++ +++.+.+... ..
T Consensus 243 c~~~-g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~g--G~~Pi~av~~~-~~i~~~~~~~~~~~~~~~h 316 (449)
T PRK07481 243 CDRH-GILLIADEVVTGFGRTGSWFGSRGWGVKPDIMC--LAKGITS--GYVPLGATMVN-ARIADAFEANADFGGAIMH 316 (449)
T ss_pred HHHc-CCEEEEeehhhCcCcCchhhHhhhcCCCCCEEE--EeecccC--CCcCceEEEEc-HHHHHHHhccCcccccccc
Confidence 9999 99999999988631 1 111233578876 5799852 4 358999987 7887776421 11
Q ss_pred hcCCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc
Q psy12791 235 SMGVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN 312 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
......+|..+..+.+.++.+.+ ..++..+..+.+.+.|+++.. .++ .+.+.++.|.++.+.+.
T Consensus 317 ~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~----------~i~~vrG~Glm~gi~l~ 382 (449)
T PRK07481 317 GYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKE----RFE----------LVGDVRGKGLMLALDLV 382 (449)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh----cCC----------CeEEEeecceEEEEEec
Confidence 11122457776666665554432 234444444455555543210 001 01123556778888873
Q ss_pred CC----------HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHH
Q psy12791 313 GG----------AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIAD 382 (393)
Q Consensus 313 ~~----------~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~ 382 (393)
.+ .+....+...+...++-+.. ....+||+..+..++++++.
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~----------------------------~g~~i~l~Ppl~it~~eid~ 434 (449)
T PRK07481 383 ADKATREPIDPSKGYANAVADVARENGVLVRP----------------------------SGTKIILSPPLVIQREDVDR 434 (449)
T ss_pred ccccccCCCCchhHHHHHHHHHHHhCCeEEEe----------------------------cCCEEEEECCCCCCHHHHHH
Confidence 21 12233444443332322211 02357888888777787777
Q ss_pred HHHHHHHh
Q psy12791 383 LDQALRKA 390 (393)
Q Consensus 383 l~~al~~~ 390 (393)
+.+++++.
T Consensus 435 ~~~~l~~~ 442 (449)
T PRK07481 435 IVDALDAG 442 (449)
T ss_pred HHHHHHHH
Confidence 77777654
No 343
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.39 E-value=3.5e-11 Score=119.41 Aligned_cols=147 Identities=12% Similarity=0.104 Sum_probs=116.2
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
++....+.++.+|+.+|++...+++||++. + .++.+++.+||.|++++.+|-+.+ +.+...|+..++++..
T Consensus 193 ~~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~----haLilsga~PVYl~P~rn~ 268 (714)
T PRK15400 193 HSGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLT----HLMMMSDVTPIYFRPTRNA 268 (714)
T ss_pred CChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHH----HHHHHcCCeEEEecccccc
Confidence 345678899999999999999999999886 7 778889999999999999998743 3567889999998653
Q ss_pred ------------CHHHHHhhcCCC--Cc---EEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-----
Q psy12791 132 ------------KIENLIKYIKPN--TK---MVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ----- 189 (393)
Q Consensus 132 ------------d~~~l~~~l~~~--~~---~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~----- 189 (393)
+.+.+++++... .+ .+++++|+ --|.+.++++|.++++.+ + +++|||++.....
T Consensus 269 ~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd~~~I~~~~~~~-~--ilvDEAwgah~~F~p~~~ 344 (714)
T PRK15400 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYNTDFIKKTLDVK-S--IHFDSAWVPYTNFSPIYE 344 (714)
T ss_pred cCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecCHHHHHHHhCCC-C--EEEEccchhhhccCcccC
Confidence 267888887542 33 78999995 669999999999999988 7 6899999873321
Q ss_pred --CCCCCcC---c--EEEEcccccccCCC
Q psy12791 190 --KSLPWGV---D--IVLYSLTKYMNGHS 211 (393)
Q Consensus 190 --~~~~~~~---d--i~~~S~sK~~~G~~ 211 (393)
.++..++ | +++.|.||.++|+.
T Consensus 345 ~~sam~~ga~~~~~i~vtQStHKtL~alT 373 (714)
T PRK15400 345 GKCGMSGGRVEGKVIYETQSTHKLLAAFS 373 (714)
T ss_pred CcChhhcCCCCCCceEEEEchhhcccchh
Confidence 1222344 4 99999999986543
No 344
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.39 E-value=1.8e-10 Score=110.46 Aligned_cols=212 Identities=13% Similarity=0.029 Sum_probs=128.8
Q ss_pred CCchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHH-HHHh-c---------cc
Q psy12791 57 NNPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRY-FAQV-A---------PK 120 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~-~~~~-~---------~~ 120 (393)
+++...+|.+.|.+..+.. ...+.+||++|+ .++.. ......+|+.-..+|++.... +... . ..
T Consensus 91 ~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~ 170 (433)
T PRK00615 91 TSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHL 170 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCC
Confidence 4566777888888877543 577788999987 44432 122335677777777763211 0000 0 00
Q ss_pred C-----CcEEEeeCCCCHHHHHhhcC---CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc
Q psy12791 121 I-----GLEVDFVDLRKIENLIKYIK---PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY 188 (393)
Q Consensus 121 ~-----g~~v~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~ 188 (393)
. ......++.+|++++++.+. ++..+|+++......|.+.| +++|.++|++| |+++|+||++..+-.
T Consensus 171 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~-g~llI~DEv~tG~R~ 249 (433)
T PRK00615 171 VDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRT-GSLSIMDEVVTGFRV 249 (433)
T ss_pred CCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEcccccccc
Confidence 0 01123345557888887764 34678888888888888887 56999999999 999999999964311
Q ss_pred c-----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH-hc--CCCCCHHHHHHHHhccCCHHH--H
Q psy12791 189 Q-----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN-SM--GVVPSPFDCWLVTRGLKTLPC--R 258 (393)
Q Consensus 189 ~-----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~--~ 258 (393)
. .......|+++ ++|.++ .|+.+|+++++ +++.+.+..... .. ....+|..+..+++.++.+++ .
T Consensus 250 G~~ga~~~~gv~PDi~~--~gK~lg--gG~p~~av~~~-~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~ 324 (433)
T PRK00615 250 AQGGAAAIYHVKPDITV--YGKILG--GGLPAAAVVAH-KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGF 324 (433)
T ss_pred cHhHHHHhcCCCCCeEE--Eccccc--CCcceeeeeec-HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccH
Confidence 1 11223467765 789995 34568999987 888887642111 11 122466676666665544321 3
Q ss_pred HHHHHHHHHHHHHHHh
Q psy12791 259 LKEHERGSIEVAKFLE 274 (393)
Q Consensus 259 ~~~~~~~~~~l~~~l~ 274 (393)
+++..+..+.+.+.|+
T Consensus 325 ~~~~~~~g~~l~~~l~ 340 (433)
T PRK00615 325 YTQLSTLEQNFLSPIE 340 (433)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444444445544444
No 345
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.39 E-value=3.3e-10 Score=109.10 Aligned_cols=213 Identities=16% Similarity=0.146 Sum_probs=135.5
Q ss_pred CCCchHHHHHHHHHHHhC-CCcEEEeccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHhcc----------cC
Q psy12791 56 SNNPTRRNLERCIASLEE-AKHGLCYSSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQVAP----------KI 121 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~-~~~~i~~~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~~----------~~ 121 (393)
++++...++.++|++... .+...+.+||++|+ .++.. ......+|+.-...|++.......... ..
T Consensus 90 ~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 169 (428)
T PRK12389 90 TPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSA 169 (428)
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCC
Confidence 345667788888887664 34577788999987 44431 223345788878888774322111100 01
Q ss_pred C------cEEEeeCCCCHHHHHhhcC---CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc
Q psy12791 122 G------LEVDFVDLRKIENLIKYIK---PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY 188 (393)
Q Consensus 122 g------~~v~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~ 188 (393)
| ..+..++.+|++.+++.+. +++.+|+++...+..|.+.| +++|.++|+++ |+++|+||++..+-.
T Consensus 170 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~-g~llI~DEV~tG~Rt 248 (428)
T PRK12389 170 GVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEA-GALVIYDEVITAFRF 248 (428)
T ss_pred CCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEEcccccccc
Confidence 1 1345566668888888774 35788999988888898888 99999999999 999999999986411
Q ss_pred c-----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH---HhcCCCCCHHHHHHHHhccCCHH--HH
Q psy12791 189 Q-----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ---NSMGVVPSPFDCWLVTRGLKTLP--CR 258 (393)
Q Consensus 189 ~-----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~ 258 (393)
. .......|++ +++|.++ .|+.+|.++++ +++.+.+.... .......+|..+..+.+.++.+. ..
T Consensus 249 ~~~~a~~~~gv~PDiv--t~gK~lg--gG~Pi~av~~~-~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l 323 (428)
T PRK12389 249 MYGGAQDLLGVEPDLT--ALGKIIG--GGLPIGAYGGR-KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGV 323 (428)
T ss_pred CcchhhHHhCCCCCee--eechhhc--CCCceeEEeEH-HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccH
Confidence 1 1122346776 6789995 35678998887 88888764211 11112346777666665554432 23
Q ss_pred HHHHHHHHHHHHHHHh
Q psy12791 259 LKEHERGSIEVAKFLE 274 (393)
Q Consensus 259 ~~~~~~~~~~l~~~l~ 274 (393)
.++..+..+++.+.|+
T Consensus 324 ~~~~~~~g~~l~~~L~ 339 (428)
T PRK12389 324 YEKLDRLGAMLEEGIL 339 (428)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444444555555554
No 346
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.37 E-value=8.1e-13 Score=119.56 Aligned_cols=166 Identities=22% Similarity=0.301 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCC---CccchHHHHHHhcccCCcEEEeeCCC---CHH
Q psy12791 62 RNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDD---VYGGTYRYFAQVAPKIGLEVDFVDLR---KIE 134 (393)
Q Consensus 62 ~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~---~y~~~~~~~~~~~~~~g~~v~~~~~~---d~~ 134 (393)
..+++.++++.|++++++++|.++|+ .++.++ .+|.+|+++.- .+++.|+ +..+.+..|+++++|-.. .++
T Consensus 50 ~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~l-a~~~EvIvsRGelVeiGgsFR-ip~vm~~sGa~lvEVGttN~t~~~ 127 (367)
T PF03841_consen 50 AHVEELLCELTGAEAALVVNNNAAAVLLALNTL-AKGKEVIVSRGELVEIGGSFR-IPDVMRQSGARLVEVGTTNRTHLS 127 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccc-ccccccccccccccccccccc-cccccccccccccccccccccccc
Confidence 45778889999999999999999997 544444 45778888864 4555553 566778889999988664 588
Q ss_pred HHHhhcCCCCcEEEEecCCCCccc----ccCHHHHHHHHHhCCCcEEEEeCccCccc------------ccCCCCCcCcE
Q psy12791 135 NLIKYIKPNTKMVWIENPTNPLMT----VFDVKAISAVVKQHPDILLVLDNTFLTAY------------YQKSLPWGVDI 198 (393)
Q Consensus 135 ~l~~~l~~~~~~v~l~~p~nptG~----~~~~~~l~~l~~~~~~~~livDea~~~~~------------~~~~~~~~~di 198 (393)
+++++++++|.+++-.|++|-.-. -.+++++.+++++| ++++++|...+... ....+..|+|+
T Consensus 128 Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~-~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDl 206 (367)
T PF03841_consen 128 DYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEH-GLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADL 206 (367)
T ss_dssp ---------------------------------HHHHHHHHH-T--EEEE-TTHHHHHHHTT----------CCCCT-SE
T ss_pred cccccccccccccccccccccccccccccccHHHHHHHHhhc-CCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCE
Confidence 999999999999988888887432 33699999999999 99999998764321 11224468999
Q ss_pred EEEcccccccCCCCceEEEEEecChHHHHHHHHHHH
Q psy12791 199 VLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN 234 (393)
Q Consensus 199 ~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~ 234 (393)
+++|.-|.++|| . .|.++++ ++++++++..+-
T Consensus 207 V~fSGdKlLGGP-Q--aGiI~Gk-k~lI~~lk~~pl 238 (367)
T PF03841_consen 207 VTFSGDKLLGGP-Q--AGIIVGK-KELIEKLKKHPL 238 (367)
T ss_dssp EEEETTSSSSS--S---EEEEEE-HHHHHHHHHHHH
T ss_pred EEEECCCcCCCC-C--eEEEEeC-HHHHHHHhhCCC
Confidence 999999999664 3 8999998 999999987654
No 347
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.37 E-value=5.2e-10 Score=108.29 Aligned_cols=285 Identities=15% Similarity=0.120 Sum_probs=159.5
Q ss_pred CCCchHHHHHHHHHHHhCCC----cEEEe-ccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHhccc------C
Q psy12791 56 SNNPTRRNLERCIASLEEAK----HGLCY-SSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQVAPK------I 121 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~----~~i~~-~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~~~------~ 121 (393)
+.++...+|.+.|++..... ..+++ +||++|+ .++.. .....++|+.-...|++.......+... +
T Consensus 98 ~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~ 177 (459)
T PRK06931 98 LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAV 177 (459)
T ss_pred cCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCC
Confidence 45667778888888876422 23455 6999987 44432 2334567888888887754332221110 0
Q ss_pred ---CcEEEeeCCCC-------------HHH----HHhhcC------CCCcEEEEecCCCCcccccC----HHHHHHHHHh
Q psy12791 122 ---GLEVDFVDLRK-------------IEN----LIKYIK------PNTKMVWIENPTNPLMTVFD----VKAISAVVKQ 171 (393)
Q Consensus 122 ---g~~v~~~~~~d-------------~~~----l~~~l~------~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~ 171 (393)
...+..+|..+ .+. +++.+. +++.+|+++..+...|.+.+ ++++.++|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~ 257 (459)
T PRK06931 178 NGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQK 257 (459)
T ss_pred CCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHH
Confidence 11233333221 122 222222 24788999888877788775 8999999999
Q ss_pred CCCcEEEEeCccCccc-c-----cCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHH
Q psy12791 172 HPDILLVLDNTFLTAY-Y-----QKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDC 245 (393)
Q Consensus 172 ~~~~~livDea~~~~~-~-----~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (393)
+ |+++|+||++..+- . ........|+++ ++|.++ .|+.+|.++.+ +++ +.+...........+|..+
T Consensus 258 ~-g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt--~gK~l~--gG~Pi~av~~~-~~~-~~~~~~~~~~T~~gnpla~ 330 (459)
T PRK06931 258 H-GILLIVDEVQAGFARTGKMFAFEHAGIEPDIIV--MSKAVG--GGLPLAVLGIK-KEF-DAWQPGGHTGTFRGNQLAM 330 (459)
T ss_pred c-CCEEEEecchhcCCcCchHHHhhhcCCCCCEEE--eccccc--CCcceeeeeeH-HHH-hhccCCCCCCCCCCCHHHH
Confidence 9 99999999988641 1 112234578875 679995 35779988876 553 4442111111223467777
Q ss_pred HHHHhccCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-----
Q psy12791 246 WLVTRGLKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG----- 314 (393)
Q Consensus 246 ~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 314 (393)
..+.+.++.+.+ ..++..+..+.+.+.|++ +|.+. +.+|.|.++.+.+..+
T Consensus 331 aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~------------------~vrG~Glm~giel~~~~~~~~ 392 (459)
T PRK06931 331 ATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIG------------------NVRGRGLMIGIEIVDERQPAD 392 (459)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeE------------------eEecCceEEEEEEccCccccc
Confidence 666666554322 223333333444444432 33222 2356678888887421
Q ss_pred --------HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHH
Q psy12791 315 --------AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQA 386 (393)
Q Consensus 315 --------~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a 386 (393)
.+....+...+...++-+... +...+.+|+.+.+..++++++.+.++
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-------------------------~~~~~~l~~~Ppl~it~~eid~~~~~ 447 (459)
T PRK06931 393 AMGSYPADGELAAAIQKACFENGLLLERG-------------------------GRNGNVVRLLPPLLITQAECEEFIDR 447 (459)
T ss_pred ccccCCccHHHHHHHHHHHHHCCcEEeec-------------------------CCCCCEEEEECCCCcCHHHHHHHHHH
Confidence 122334444433323222111 11146799988888888777766666
Q ss_pred HHHh
Q psy12791 387 LRKA 390 (393)
Q Consensus 387 l~~~ 390 (393)
+++.
T Consensus 448 l~~~ 451 (459)
T PRK06931 448 FEQA 451 (459)
T ss_pred HHHH
Confidence 6543
No 348
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.36 E-value=4.3e-10 Score=109.00 Aligned_cols=213 Identities=12% Similarity=0.089 Sum_probs=125.3
Q ss_pred CCCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHHh--c----C-C-CCeEEEcCCCccchHHHHHHhccc----
Q psy12791 56 SNNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTHL--L----S-A-GDHIISGDDVYGGTYRYFAQVAPK---- 120 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~~--~----~-~-gd~vl~~~~~y~~~~~~~~~~~~~---- 120 (393)
+..+...+|.+.|++.... +...+.+||++|. .++... . . + ..+|+.-...|++.......+...
T Consensus 87 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~ 166 (466)
T PRK07030 87 FSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFT 166 (466)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCcccc
Confidence 3456777888888887642 3567778888886 444321 1 1 2 356888888887643111111000
Q ss_pred --CC---cEEEeeCCC-----------------CHHHHHhhcC---CCCcEEEEec-CCCCcccccC----HHHHHHHHH
Q psy12791 121 --IG---LEVDFVDLR-----------------KIENLIKYIK---PNTKMVWIEN-PTNPLMTVFD----VKAISAVVK 170 (393)
Q Consensus 121 --~g---~~v~~~~~~-----------------d~~~l~~~l~---~~~~~v~l~~-p~nptG~~~~----~~~l~~l~~ 170 (393)
++ ..+..+|.. +++++++.+. +++.+|+++. .+...|.+.+ +++|.++|+
T Consensus 167 ~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~ 246 (466)
T PRK07030 167 ETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACD 246 (466)
T ss_pred ccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHH
Confidence 00 012223221 2445566653 4578888887 5777788775 889999999
Q ss_pred hCCCcEEEEeCccCccc-cc-----CCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHH-------HHhc
Q psy12791 171 QHPDILLVLDNTFLTAY-YQ-----KSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFL-------QNSM 236 (393)
Q Consensus 171 ~~~~~~livDea~~~~~-~~-----~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~-------~~~~ 236 (393)
++ |+++|+||++..+- .. .......|+++ ++|.++ .| +.+|.++++ +++.+.+... ....
T Consensus 247 ~~-g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~--~gKgl~--gG~~Pi~av~~~-~ei~~~~~~~~~~~~~~~h~~ 320 (466)
T PRK07030 247 RY-GVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLC--LSKALT--GGYLPLAAVLTT-DTVYQAFYDDYPTLRAFLHSH 320 (466)
T ss_pred Hc-CCEEEEeehhhCcCccccchHHHhcCCCCCEEe--eehhcc--CCcccceEEEec-HHHHHHHhcccccccccccCC
Confidence 99 99999999987531 11 12234578886 579995 36 369999987 7887766321 1111
Q ss_pred CCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHh
Q psy12791 237 GVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLE 274 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~ 274 (393)
....++..+..+...++.+.+ ..++..+.-..+.+.|+
T Consensus 321 T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~ 360 (466)
T PRK07030 321 SYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATA 360 (466)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 122467777766666554432 22333333344444444
No 349
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.36 E-value=2.8e-10 Score=113.12 Aligned_cols=155 Identities=10% Similarity=0.029 Sum_probs=117.8
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
+.....+.++.+|+.+|++...+++||++. + .++.+++.+||.|++++.+|-+.+ +.+...|+..++++..
T Consensus 193 ~~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~----~aLilsga~PVYl~P~~n~ 268 (713)
T PRK15399 193 HTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLA----HLLMMSDVVPIWLKPTRNA 268 (713)
T ss_pred CChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHH----HHHHHcCCeeEEecccccc
Confidence 345677889999999999999999999886 7 788889999999999999998743 3567889999998653
Q ss_pred -------C-----HHHHHhhcCCC-----CcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC---
Q psy12791 132 -------K-----IENLIKYIKPN-----TKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS--- 191 (393)
Q Consensus 132 -------d-----~~~l~~~l~~~-----~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~--- 191 (393)
+ .+.+++++.+. ++++++++|+ --|.+.++++|.+.+. . .++++|||++......+
T Consensus 269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~~I~~~~g-~--~~ilvDEAhgah~~F~p~~~ 344 (713)
T PRK15399 269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYNTDWIKQTLD-V--PSIHFDSAWVPYTHFHPIYQ 344 (713)
T ss_pred cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeCHHHHHHHhC-C--CEEEEeccchhhhhcCcccC
Confidence 2 37787777532 3689999996 6699999999999882 2 24579999987332212
Q ss_pred ----CCC--cCcEE---EEcccccccCCCCceEEEEEec
Q psy12791 192 ----LPW--GVDIV---LYSLTKYMNGHSDVVMGATVTN 221 (393)
Q Consensus 192 ----~~~--~~di~---~~S~sK~~~G~~G~r~G~~~~~ 221 (393)
+.. ++|.+ +.|.||.++|+.. ..++-.+
T Consensus 345 ~~sam~~~~~aD~~i~~tQStHKtL~alTQ--aS~iHvk 381 (713)
T PRK15399 345 GKSGMSGERVPGKVIFETQSTHKMLAAFSQ--ASLIHIK 381 (713)
T ss_pred CcChhhCCCCCCeeeeeeeehhccccccch--heeeeec
Confidence 212 46766 9999999976654 5665554
No 350
>PRK06917 hypothetical protein; Provisional
Probab=99.35 E-value=1.1e-09 Score=105.77 Aligned_cols=291 Identities=13% Similarity=0.038 Sum_probs=165.1
Q ss_pred CCCchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHHHh--c-----CC-CCeEEEcCCCccchHHHHHHhcccC---
Q psy12791 56 SNNPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVTHL--L-----SA-GDHIISGDDVYGGTYRYFAQVAPKI--- 121 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~~~--~-----~~-gd~vl~~~~~y~~~~~~~~~~~~~~--- 121 (393)
+..+...+|.+.|++..... ...+.+||++|+ .++... . .+ ..+|+.-...|++............
T Consensus 71 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~ 150 (447)
T PRK06917 71 FTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRR 150 (447)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccc
Confidence 45677788999999887543 466678999987 544321 1 12 3578888888877543222211100
Q ss_pred --------CcEEEeeCC------C---------CHHHHHhhcC----CCCcEEEEecCCCC-cccccC----HHHHHHHH
Q psy12791 122 --------GLEVDFVDL------R---------KIENLIKYIK----PNTKMVWIENPTNP-LMTVFD----VKAISAVV 169 (393)
Q Consensus 122 --------g~~v~~~~~------~---------d~~~l~~~l~----~~~~~v~l~~p~np-tG~~~~----~~~l~~l~ 169 (393)
+......|. + +++.+++.+. +++.+|+++..... .|.+.+ +++|.++|
T Consensus 151 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc 230 (447)
T PRK06917 151 QRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEIC 230 (447)
T ss_pred ccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHH
Confidence 111111111 0 2345555553 35788999876653 456655 88999999
Q ss_pred HhCCCcEEEEeCccCccc-cc-----CCCCCcCcEEEEcccccccCCCCc-eEEEEEecChHHHHHHHHHHH--hc--CC
Q psy12791 170 KQHPDILLVLDNTFLTAY-YQ-----KSLPWGVDIVLYSLTKYMNGHSDV-VMGATVTNDDSLQARLKFLQN--SM--GV 238 (393)
Q Consensus 170 ~~~~~~~livDea~~~~~-~~-----~~~~~~~di~~~S~sK~~~G~~G~-r~G~~~~~~~~~~~~~~~~~~--~~--~~ 238 (393)
+++ |+++|+||++..+- .. .......|++ +++|.++ .|+ .+|.++++ +++.+.+..... .. ..
T Consensus 231 ~~~-g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~--~~gK~l~--~G~~Pi~a~~~~-~~i~~~~~~~~~~~~~~~T~ 304 (447)
T PRK06917 231 DHY-DILFIADEVMTGLGRTGAMFAMEHWGVEPDIM--TLGKGLG--AGYTPIAATVVS-DRVMEPILRGSRSIMSGHTL 304 (447)
T ss_pred HHc-CCEEEEechhhCcCcccchhhHHhcCCCCCEE--Eeeehhc--cCCcceEEEEEc-HHHHHHHhccCcccccccCC
Confidence 999 99999999987531 11 1122346776 4689995 343 58998887 788776642111 11 12
Q ss_pred CCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc
Q psy12791 239 VPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN 312 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
..++..+..+.+.++.+.. ..++..+..+.+.+.|++ ++.+. +.++.|.++.+.+.
T Consensus 305 ~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vrG~Gl~~~ie~~ 366 (447)
T PRK06917 305 SANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIG------------------DVRGKGLLIGVEFV 366 (447)
T ss_pred CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEE------------------EEeecceEEEEEEe
Confidence 3457776666665554432 234444444445554443 22222 22456778888773
Q ss_pred CC----------HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHH
Q psy12791 313 GG----------AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIAD 382 (393)
Q Consensus 313 ~~----------~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~ 382 (393)
.+ .+....+.+.+...++-+...+.. ..|...+.+|+++.+..++++++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~--------------------~~g~~~~~i~l~Ppl~it~~eid~ 426 (447)
T PRK06917 367 ADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAG--------------------QDGKEGDAVIIAPPMTITYSELDE 426 (447)
T ss_pred ccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccc--------------------cCCCCCCEEEEECCCcCCHHHHHH
Confidence 11 123455555544434332211000 001124689999988888888888
Q ss_pred HHHHHHHh
Q psy12791 383 LDQALRKA 390 (393)
Q Consensus 383 l~~al~~~ 390 (393)
+.+++.+.
T Consensus 427 ~~~~l~~~ 434 (447)
T PRK06917 427 LLSIFAKS 434 (447)
T ss_pred HHHHHHHH
Confidence 77777654
No 351
>PRK07480 putative aminotransferase; Validated
Probab=99.35 E-value=4.2e-10 Score=108.83 Aligned_cols=213 Identities=18% Similarity=0.155 Sum_probs=125.4
Q ss_pred CCCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHH--hc----C-CC-CeEEEcCCCccchHHHHHHhc------
Q psy12791 56 SNNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTH--LL----S-AG-DHIISGDDVYGGTYRYFAQVA------ 118 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~--~~----~-~g-d~vl~~~~~y~~~~~~~~~~~------ 118 (393)
+.++...+|.++|++.... +...+.+||++|+ .++.. .. . +| .+|+.-...|++....-....
T Consensus 91 ~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~ 170 (456)
T PRK07480 91 TTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMH 170 (456)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhh
Confidence 4567788899999988753 3577789999986 44421 11 1 23 467777777776431110000
Q ss_pred ccCCc---EEEeeCCC---------------C--HHHHHhhc----CCCCcEEEEecCCCCcccccC----HHHHHHHHH
Q psy12791 119 PKIGL---EVDFVDLR---------------K--IENLIKYI----KPNTKMVWIENPTNPLMTVFD----VKAISAVVK 170 (393)
Q Consensus 119 ~~~g~---~v~~~~~~---------------d--~~~l~~~l----~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~ 170 (393)
...+. .+..++.. + ++.+++.+ .+++.+|+++..+...|.+.+ +++|.++|+
T Consensus 171 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~ 250 (456)
T PRK07480 171 EQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICR 250 (456)
T ss_pred cccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 00111 12222211 1 24454444 245789999988888888876 999999999
Q ss_pred hCCCcEEEEeCccCcc-ccc-----CCCCCcCcEEEEcccccccCCCCc-eEEEEEecChHHHHHHHH----HHHhcCCC
Q psy12791 171 QHPDILLVLDNTFLTA-YYQ-----KSLPWGVDIVLYSLTKYMNGHSDV-VMGATVTNDDSLQARLKF----LQNSMGVV 239 (393)
Q Consensus 171 ~~~~~~livDea~~~~-~~~-----~~~~~~~di~~~S~sK~~~G~~G~-r~G~~~~~~~~~~~~~~~----~~~~~~~~ 239 (393)
+| |+++|+||++..+ -.. .......|++ +++|.++| |+ .+|.++++ +++.+.+.. ........
T Consensus 251 ~~-g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv--~~gK~l~g--G~~Pi~av~~~-~~i~~~~~~~~~~~~~~~T~~ 324 (456)
T PRK07480 251 KY-DILLVADEVICGFGRTGEWFGSQHFGIKPDLM--TIAKGLTS--GYIPMGAVGVG-DRVAEVLIEEGGEFNHGFTYS 324 (456)
T ss_pred Hc-CCEEEEechhhCCCcCcchhhhhhcCCCCCee--eeehhhcc--CCccceEEEEc-HHHHHHHhcCCCCcccCCCCC
Confidence 99 9999999999753 111 1122346776 46899853 42 58888887 788776631 11111223
Q ss_pred CCHHHHHHHHhccCCHHH--HHHHH-HHHHHHHHHHHh
Q psy12791 240 PSPFDCWLVTRGLKTLPC--RLKEH-ERGSIEVAKFLE 274 (393)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~l~~~l~ 274 (393)
.+|..+..+.+.++.+.+ ..++. .+..+.+.+.|+
T Consensus 325 gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~ 362 (456)
T PRK07480 325 GHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLR 362 (456)
T ss_pred cCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 457777777666654432 22333 233444555554
No 352
>KOG1404|consensus
Probab=99.33 E-value=7.5e-11 Score=105.88 Aligned_cols=288 Identities=20% Similarity=0.139 Sum_probs=163.0
Q ss_pred ccCCCCchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHH-H-hcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 53 YSRSNNPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVT-H-LLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 53 y~~~~~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~-~-~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
.+-|-++...++.++|++.+-.+ -..+++||++|. .++. + +-...-.++.-..+|+++... .+...|.....
T Consensus 86 t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~---t~glt~~~~~k 162 (442)
T KOG1404|consen 86 TSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLY---TLGLTGLSPWK 162 (442)
T ss_pred eccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchh---hcccccCCccc
Confidence 34455677888888888876554 466778888886 3332 2 222233566666677654311 12222221111
Q ss_pred ------------eCCC---------C---------HHHHHhhc---CC-CCcEEEEecCCCCcccccC----HHHHHHHH
Q psy12791 128 ------------VDLR---------K---------IENLIKYI---KP-NTKMVWIENPTNPLMTVFD----VKAISAVV 169 (393)
Q Consensus 128 ------------~~~~---------d---------~~~l~~~l---~~-~~~~v~l~~p~nptG~~~~----~~~l~~l~ 169 (393)
.... + .+++++.+ .+ ...+.+.+..+...|.+.+ +++..++|
T Consensus 163 ~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v 242 (442)
T KOG1404|consen 163 QNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVV 242 (442)
T ss_pred ccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHH
Confidence 1100 0 13333333 22 3566777888888888875 89999999
Q ss_pred HhCCCcEEEEeCccCccc------ccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH-HhcCCCCCH
Q psy12791 170 KQHPDILLVLDNTFLTAY------YQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ-NSMGVVPSP 242 (393)
Q Consensus 170 ~~~~~~~livDea~~~~~------~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~-~~~~~~~~~ 242 (393)
+++ |.++|.||++..+- ....-+.-.||+ |++|.++ .|..+|.+++. +++.+.+.... .+..-...|
T Consensus 243 ~k~-Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIv--TmAKgiG--nG~Pl~AVvtt-~EIa~v~~~~~~~fnTyggnP 316 (442)
T KOG1404|consen 243 RKR-GGLFIADEVQTGFGRTGHMWGFESHGVVPDIV--TMAKGIG--NGFPLGAVVTT-PEIADVLNQKSSHFNTYGGNP 316 (442)
T ss_pred HHc-CCEEEehhhhhccccccccccccccCCCccHH--HHHhhcc--CCCcceeeecC-HHHHHHHHhccccccccCCCc
Confidence 999 99999999998732 111111235666 7999994 45779999997 89999887655 333333456
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhC-CCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH------
Q psy12791 243 FDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESH-PCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA------ 315 (393)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 315 (393)
+.++.....++-+ +.+++.+++.....+|.+. ..+. -.+|- +-+.+|.|.|+-+++-.+.
T Consensus 317 ~a~avg~aVL~Vi--kee~LqE~aa~vG~yl~~~l~~l~-d~h~i----------IGdVRG~GLm~GvE~V~dk~~~~pp 383 (442)
T KOG1404|consen 317 VACAVGLAVLKVI--KEENLQENAAEVGSYLLEKLAALK-DKHPI----------IGDVRGRGLMLGVELVSDKSEPKPP 383 (442)
T ss_pred hhHHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHHHh-hcCCc----------eeecccceeEEEEEEecccCCCCCc
Confidence 6665555544433 3444555555554444320 0000 01111 1233666778888764322
Q ss_pred --HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 316 --EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 316 --~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
.....+.+..+..++.+.-|+ .....+|++..+--|.++++.+.+..
T Consensus 384 ~~~~~~~i~~~cke~Gvlvg~g~-------------------------i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 384 ATAEGAVIGEQCKELGVLVGKGG-------------------------IHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred chHHHHHHHHHHHHhCeeeeccc-------------------------ccceEEEecCCeeccHHHHHHHHHHH
Confidence 223333333333343332222 22458999988888888887666644
No 353
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.33 E-value=4.7e-10 Score=108.72 Aligned_cols=194 Identities=13% Similarity=0.098 Sum_probs=116.7
Q ss_pred CCCchHHHHHHHHHHHhCC-------CcEEEeccHHHHH-HHHHHh--c----C-C-CCeEEEcCCCccchHHHHHHhcc
Q psy12791 56 SNNPTRRNLERCIASLEEA-------KHGLCYSSGLGAV-TAVTHL--L----S-A-GDHIISGDDVYGGTYRYFAQVAP 119 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~-------~~~i~~~~G~~al-~~~~~~--~----~-~-gd~vl~~~~~y~~~~~~~~~~~~ 119 (393)
+.++...+|.+.|++.... +...+.+||++|+ .++... . . + ..+|+.-...|++..........
T Consensus 104 ~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~ 183 (472)
T PRK08742 104 FTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGD 183 (472)
T ss_pred cCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccC
Confidence 3456677888888887642 2567778899986 444321 1 1 2 35788888888774321111100
Q ss_pred c------CC---cEEEeeCCC-----------------CHHHHHhhcC---CCCcEEEEec-CCCCcccccC----HHHH
Q psy12791 120 K------IG---LEVDFVDLR-----------------KIENLIKYIK---PNTKMVWIEN-PTNPLMTVFD----VKAI 165 (393)
Q Consensus 120 ~------~g---~~v~~~~~~-----------------d~~~l~~~l~---~~~~~v~l~~-p~nptG~~~~----~~~l 165 (393)
. ++ ..+..+|.. +++.+++.+. +++.+|+++. .++..|.+.+ ++++
T Consensus 184 ~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~l 263 (472)
T PRK08742 184 IPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRA 263 (472)
T ss_pred CcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHH
Confidence 0 00 012223321 1345555553 4578888887 5777787765 8999
Q ss_pred HHHHHhCCCcEEEEeCccCccc-cc-----CCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHH---H--
Q psy12791 166 SAVVKQHPDILLVLDNTFLTAY-YQ-----KSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFL---Q-- 233 (393)
Q Consensus 166 ~~l~~~~~~~~livDea~~~~~-~~-----~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~---~-- 233 (393)
.++|+++ |+++|+||++..+- .. .......|+++ ++|.++ .| +.+|.++++ +++.+.+... .
T Consensus 264 r~lc~~~-gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~--~gKgl~--gG~~Plaav~~~-~ei~~~~~~~~~~~~~ 337 (472)
T PRK08742 264 RELCDAH-GAFLIADEIATGFGRTGTLFACEQAGVMPDLLC--LSKGLT--GGFLPLSAVLAT-QQLYDAFLDDSRERAF 337 (472)
T ss_pred HHHHHHc-CCEEEEechhhCCCCCccchHHHhcCCCCCEEE--Eccccc--CCCCCcceeecc-HHHHHHhhccCccCcc
Confidence 9999999 99999999988631 11 11223578886 579995 24 358888887 7887765321 0
Q ss_pred -HhcCCCCCHHHHHHHHhccCCH
Q psy12791 234 -NSMGVVPSPFDCWLVTRGLKTL 255 (393)
Q Consensus 234 -~~~~~~~~~~~~~~~~~~~~~~ 255 (393)
.......++..+..+.+.++.+
T Consensus 338 ~h~~T~~gnpl~~Aaa~a~L~~i 360 (472)
T PRK08742 338 LHSHSYTGNPLACAAALATLDIF 360 (472)
T ss_pred CcCCCCCccHHHHHHHHHHHHHH
Confidence 1111224677776666655443
No 354
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.33 E-value=4e-10 Score=108.32 Aligned_cols=285 Identities=17% Similarity=0.088 Sum_probs=165.7
Q ss_pred CCchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHHH-h--c----CC-CCeEEEcCCCccchHHHHHHhccc-----
Q psy12791 57 NNPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVTH-L--L----SA-GDHIISGDDVYGGTYRYFAQVAPK----- 120 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~~-~--~----~~-gd~vl~~~~~y~~~~~~~~~~~~~----- 120 (393)
..+...++.+.|++..+.. ...+.++|++++ .++.. . . .+ ..+|+.-..+|++...........
T Consensus 86 ~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~ 165 (427)
T TIGR00508 86 THKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMH 165 (427)
T ss_pred CCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccccc
Confidence 3456677888888876543 577778899886 44432 1 1 12 357888888887643221111010
Q ss_pred --CC---cEEEeeCC---------C--CHHHHHhhcC---CCCcEEEEecC-CCCcccccC----HHHHHHHHHhCCCcE
Q psy12791 121 --IG---LEVDFVDL---------R--KIENLIKYIK---PNTKMVWIENP-TNPLMTVFD----VKAISAVVKQHPDIL 176 (393)
Q Consensus 121 --~g---~~v~~~~~---------~--d~~~l~~~l~---~~~~~v~l~~p-~nptG~~~~----~~~l~~l~~~~~~~~ 176 (393)
++ ..+..++. + |++++++.+. ++..+|+++.. ++..|...+ +++|.++|+++ |++
T Consensus 166 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~-~~l 244 (427)
T TIGR00508 166 SLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQY-DIL 244 (427)
T ss_pred ccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc-CCE
Confidence 00 01111111 1 3455666553 34678888875 666666553 89999999999 999
Q ss_pred EEEeCccCcccc-cC-----CCCCcCcEEEEcccccccCCCCc-eEEEEEecChHHHHHHHHHH-----HhcCCCCCHHH
Q psy12791 177 LVLDNTFLTAYY-QK-----SLPWGVDIVLYSLTKYMNGHSDV-VMGATVTNDDSLQARLKFLQ-----NSMGVVPSPFD 244 (393)
Q Consensus 177 livDea~~~~~~-~~-----~~~~~~di~~~S~sK~~~G~~G~-r~G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 244 (393)
+|+||++..+.. .. ......|+++ ++|.++ .|+ .++.++.+ +++.+.++... .......++..
T Consensus 245 lI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~--gG~~p~~a~~~~-~~~~~~~~~~~~~~~~~~~T~~g~p~~ 319 (427)
T TIGR00508 245 LIADEIATGFGRTGKLFACEHAGVVPDILC--VGKALT--GGYMTLSATVTT-DKVAQTISSGEAGCFMHGPTFMGNPLA 319 (427)
T ss_pred EEEeccccCCCcCCccchhhhcCCCCCEEE--echhhh--cCcccceEEEEc-HHHHHHHhcCCCCccccCCCCCcCHHH
Confidence 999999854211 11 1223567775 799994 353 47777776 78877775311 11111235666
Q ss_pred HHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHH
Q psy12791 245 CWLVTRGLKTLP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFL 322 (393)
Q Consensus 245 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (393)
+..+.+.++.+. ...++..+...++.+.|+++.. ++. ....++.|.++.+.+. ++.....+.
T Consensus 320 ~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~----------i~~vrg~G~~~~i~~~-~~~~~~~~~ 383 (427)
T TIGR00508 320 CAVAEASLAILLEGEWQKQVSAIENQLKRELSPLRK-----NPV----------VKDVRVLGAIGVVEMY-KPVNVEELQ 383 (427)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-----CCC----------EEeEeccccEEEEEEC-CccCHHHHH
Confidence 666555554332 2345555566666676664321 111 1122456788888884 333345555
Q ss_pred HhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 323 ESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 323 ~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+++...++-+.. ....+|+++....++++++.+.+++++..
T Consensus 384 ~~l~~~Gv~~~~----------------------------~~~~l~~~ppl~~t~~~id~~~~~l~~~l 424 (427)
T TIGR00508 384 KKFVEQGVWIRP----------------------------FGKLIYVMPPYIITTEQLQKLTAALIEAL 424 (427)
T ss_pred HHHHHCCeEEEe----------------------------cCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 555443322210 02468999999999999999998887653
No 355
>PRK07036 hypothetical protein; Provisional
Probab=99.32 E-value=1.3e-09 Score=105.70 Aligned_cols=236 Identities=17% Similarity=0.153 Sum_probs=136.5
Q ss_pred CCCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHH--hc----C-C-CCeEEEcCCCccchHHHHHHhcccC---
Q psy12791 56 SNNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTH--LL----S-A-GDHIISGDDVYGGTYRYFAQVAPKI--- 121 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~--~~----~-~-gd~vl~~~~~y~~~~~~~~~~~~~~--- 121 (393)
++++...+|.+.|++.... +...+.+||++|+ .++.. .. . + ..+|+.-...|++.......+....
T Consensus 92 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~ 171 (466)
T PRK07036 92 MTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADR 171 (466)
T ss_pred cCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCccc
Confidence 3456677888888887643 3466678888886 44432 11 1 2 3578887777876431111111000
Q ss_pred ---C---cEEEeeCCCC-----------------HHHHHhhcC----CCCcEEEEecCCCCcccccC----HHHHHHHHH
Q psy12791 122 ---G---LEVDFVDLRK-----------------IENLIKYIK----PNTKMVWIENPTNPLMTVFD----VKAISAVVK 170 (393)
Q Consensus 122 ---g---~~v~~~~~~d-----------------~~~l~~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~ 170 (393)
+ ..+..++..+ ++.+++.+. +++.+|+++..+...|.+.| +++|.++|+
T Consensus 172 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~ 251 (466)
T PRK07036 172 TEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICR 251 (466)
T ss_pred ccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHH
Confidence 0 1122222211 223444432 45789999988888898887 999999999
Q ss_pred hCCCcEEEEeCccCcc-cc------cCCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHH-------HHh
Q psy12791 171 QHPDILLVLDNTFLTA-YY------QKSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFL-------QNS 235 (393)
Q Consensus 171 ~~~~~~livDea~~~~-~~------~~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~-------~~~ 235 (393)
+| |+++|+||++..+ -. +.......|+++ ++|.++ .| +.+|.++++ +++.+.+... ...
T Consensus 252 ~~-g~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt--~gK~l~--gG~~Pi~av~~~-~~i~~~~~~~~~~~~~~~~~ 325 (466)
T PRK07036 252 RY-DILYISDEVVTGFGRLGHFFASEAVFGIQPDIIT--FAKGLT--SGYQPLGAVIIS-ERLLDVISGPNAKGNVFTHG 325 (466)
T ss_pred Hc-CCEEEEeechhCCCcCchhhhhhhhcCCCCCEEE--Eccccc--cCccccEEEEEc-HHHHHHHhcccCcCcccccC
Confidence 99 9999999999753 11 112233568774 679995 25 358999987 8888776421 111
Q ss_pred cCCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc
Q psy12791 236 MGVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN 312 (393)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
.....+|..+..+...++.+.+ ..++..+..+.+.+.|+.+. .+|. +.+.++.|.++.+.+.
T Consensus 326 ~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~-----~~~~----------v~~vrG~Gl~~~ve~~ 389 (466)
T PRK07036 326 FTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLR-----ELPL----------VGDVRGDHLMACVECV 389 (466)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhc-----cCCC----------EEEEEeeceEEEEEEc
Confidence 1123467777766666655432 23444444445555554321 0111 1223566788888884
No 356
>PRK06148 hypothetical protein; Provisional
Probab=99.32 E-value=1.3e-10 Score=122.36 Aligned_cols=320 Identities=13% Similarity=0.037 Sum_probs=181.8
Q ss_pred CCCCC-CCCCCCCcc-CCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHH--Hhc
Q psy12791 22 DQWRS-QCVIPPIIL-STTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVT--HLL 94 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~-~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~--~~~ 94 (393)
..++| .++...++- .+.+.+++.+++.......++..+...++.++|++.+.. +...+++||++|. .++. ...
T Consensus 624 ~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~ 703 (1013)
T PRK06148 624 RAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNTRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAH 703 (1013)
T ss_pred CEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcCCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHh
Confidence 34566 333333332 233444443433322222355677888899999988754 3467889999987 4442 222
Q ss_pred CCCCeEEEcCCCccchHHHHHHh----cc-cCC----cEEEe--------eCCC--C-------HHHHHhhcC------C
Q psy12791 95 SAGDHIISGDDVYGGTYRYFAQV----AP-KIG----LEVDF--------VDLR--K-------IENLIKYIK------P 142 (393)
Q Consensus 95 ~~gd~vl~~~~~y~~~~~~~~~~----~~-~~g----~~v~~--------~~~~--d-------~~~l~~~l~------~ 142 (393)
...++|+.....|++.......+ .+ ..+ ..+.. .+.. + .+.+++.+. +
T Consensus 704 tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~ 783 (1013)
T PRK06148 704 TGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGR 783 (1013)
T ss_pred cCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCC
Confidence 33457888888887643211110 00 011 01111 1121 1 123443332 3
Q ss_pred CCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcc-ccc------CCCCCcCcEEEEcccccccCCC
Q psy12791 143 NTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTA-YYQ------KSLPWGVDIVLYSLTKYMNGHS 211 (393)
Q Consensus 143 ~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~-~~~------~~~~~~~di~~~S~sK~~~G~~ 211 (393)
++.+|+++......|.+.+ ++++.++|+++ |+++|+||++..+ -.. .......||++ ++|.++ .
T Consensus 784 ~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~-g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt--~gK~lg--g 858 (1013)
T PRK06148 784 GPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA-GGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVT--MGKPIG--N 858 (1013)
T ss_pred ceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh-CCEEEEEecccCCCCCCCcchhhhhcCCCcceee--eccccc--C
Confidence 5788999988888888886 99999999999 9999999999753 111 11223468875 689995 3
Q ss_pred CceEEEEEecChHHHHHHHHHH-HhcCCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeC
Q psy12791 212 DVVMGATVTNDDSLQARLKFLQ-NSMGVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLH 284 (393)
Q Consensus 212 G~r~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~ 284 (393)
|+.+|.++++ +++.+.+..-. .......++..+..+...++.+.+ ..++..+....+.+.|++ ++.+.
T Consensus 859 G~Plgav~~~-~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~---- 933 (1013)
T PRK06148 859 GHPMGAVVTT-REIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIG---- 933 (1013)
T ss_pred CcceEEEEEc-HHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCce----
Confidence 5779999997 88877664211 111222467777666666554422 233333334444444432 22222
Q ss_pred CCCCCCcchHHHhhhcCCCcceEEEEEcCC-------HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhH
Q psy12791 285 PGLPSHPNHELAKSQWSGTSGMLSFYVNGG-------AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETR 357 (393)
Q Consensus 285 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~ 357 (393)
+.+|.|.++.+.+..+ .+....+.+.+...++-+...
T Consensus 934 --------------~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---------------------- 977 (1013)
T PRK06148 934 --------------DVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTE---------------------- 977 (1013)
T ss_pred --------------EEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEecc----------------------
Confidence 2355678888887421 233455665554444333211
Q ss_pred hhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 358 DALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 358 ~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
|.....||+.+.+..++++++.+.++|++.
T Consensus 978 ---g~~~~vlr~~Ppl~it~~~id~~l~~l~~~ 1007 (1013)
T PRK06148 978 ---GPHDNVLKIRPPLIFSRADADHLLEVLDDV 1007 (1013)
T ss_pred ---CCCCCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 112478999998888888888777777654
No 357
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.32 E-value=3.5e-10 Score=109.41 Aligned_cols=213 Identities=13% Similarity=0.091 Sum_probs=130.1
Q ss_pred CCchHHHHHHHHHHHhC-CCcEEEeccHHHHH-HHHHH--hcCCCCeEEEcCCCccchHHHHHHh----------cccCC
Q psy12791 57 NNPTRRNLERCIASLEE-AKHGLCYSSGLGAV-TAVTH--LLSAGDHIISGDDVYGGTYRYFAQV----------APKIG 122 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~-~~~~i~~~~G~~al-~~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~----------~~~~g 122 (393)
+++...+|.+.|++... .+...+.+||++|. .++.. .....++|+....+|++....+... ....|
T Consensus 137 ~~~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g 216 (474)
T PLN02482 137 PCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPG 216 (474)
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCC
Confidence 34555667777777653 34577788899986 44422 2233467888788887743221110 00111
Q ss_pred c------EEEeeCCCCHHHHHhhcC---CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccccc
Q psy12791 123 L------EVDFVDLRKIENLIKYIK---PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQ 189 (393)
Q Consensus 123 ~------~v~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~ 189 (393)
. .+..++.+|++.+++.+. ++..+|+++......|.+.| +++|.++|++| |+++|+||++..+-..
T Consensus 217 ~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~-g~lLI~DEV~tGfR~g 295 (474)
T PLN02482 217 VPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKEN-GALLVFDEVMTGFRIA 295 (474)
T ss_pred CCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCeecC
Confidence 1 245566678888888775 34778888888888898887 67899999999 9999999998653211
Q ss_pred C-----CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH-hcCCC--CCHHHHHHHHhccCCHH--HHH
Q psy12791 190 K-----SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN-SMGVV--PSPFDCWLVTRGLKTLP--CRL 259 (393)
Q Consensus 190 ~-----~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~--~~~ 259 (393)
. ......|++ +++|.++ .|+.+|.++++ +++.+.+..... ..+.+ .++..+..+...++.++ ...
T Consensus 296 ~~ga~~~~gv~PDi~--t~gK~lg--gG~Pigav~g~-~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~ 370 (474)
T PLN02482 296 YGGAQEYFGITPDLT--TLGKVIG--GGLPVGAYGGR-REIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTY 370 (474)
T ss_pred cchHhHHhCCCCCEE--Eecchhh--CCCceEEEEEc-HHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHH
Confidence 1 112346775 6789995 45678999887 888887642111 11111 34555554544443332 234
Q ss_pred HHHHHHHHHHHHHHhh
Q psy12791 260 KEHERGSIEVAKFLES 275 (393)
Q Consensus 260 ~~~~~~~~~l~~~l~~ 275 (393)
++..+..+.+.+.|++
T Consensus 371 ~~~~~~g~~l~~~L~~ 386 (474)
T PLN02482 371 EYLDKITKKLIQGILE 386 (474)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4444555555555543
No 358
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.31 E-value=5.3e-10 Score=108.37 Aligned_cols=285 Identities=14% Similarity=0.082 Sum_probs=163.4
Q ss_pred CCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHH-hc------CC-CCeEEEcCCCccchHHHHHHhccc-----
Q psy12791 57 NNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTH-LL------SA-GDHIISGDDVYGGTYRYFAQVAPK----- 120 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~-~~------~~-gd~vl~~~~~y~~~~~~~~~~~~~----- 120 (393)
.++...+|.+.|+++... +...+.+||++|+ .++.. .. .+ ..+|+.-...|++.......+...
T Consensus 97 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~ 176 (460)
T PRK06916 97 ANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQ 176 (460)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCccccc
Confidence 456677888889888753 3577778899986 44432 11 13 357888888887743221111100
Q ss_pred -CC---cEEEeeCCC-----------------CHHHHHhhcC---CCCcEEEEec-CCCCcccccC----HHHHHHHHHh
Q psy12791 121 -IG---LEVDFVDLR-----------------KIENLIKYIK---PNTKMVWIEN-PTNPLMTVFD----VKAISAVVKQ 171 (393)
Q Consensus 121 -~g---~~v~~~~~~-----------------d~~~l~~~l~---~~~~~v~l~~-p~nptG~~~~----~~~l~~l~~~ 171 (393)
++ ..+..+|.. +++.+++.+. ++..+|+++. ++...|.+.+ +++|.++|++
T Consensus 177 ~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~ 256 (460)
T PRK06916 177 VYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTK 256 (460)
T ss_pred ccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHH
Confidence 00 012222211 2445556553 4678899988 5777787765 8999999999
Q ss_pred CCCcEEEEeCccCcc-ccc-----CCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHH-------HHhcC
Q psy12791 172 HPDILLVLDNTFLTA-YYQ-----KSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFL-------QNSMG 237 (393)
Q Consensus 172 ~~~~~livDea~~~~-~~~-----~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~-------~~~~~ 237 (393)
+ |+++|+||++..+ -.. .......|+++ ++|.++ .| +.+|.++++ +++.+.+... .....
T Consensus 257 ~-g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~--~gK~l~--gG~~Pi~av~~~-~ei~~~~~~~~~~~~~~~~~~T 330 (460)
T PRK06916 257 Y-NVLFITDEVATGFGRTGKMFACEHENVTPDIMT--AGKGLT--GGYLPIAITVTT-DEIYNAFYGDYEEQKTFFHGHS 330 (460)
T ss_pred c-CCEEEeechhhCCCcCchhhHHHhcCCCCCeee--eehhhh--cCccccceeeec-HHHHHHhhccccccCccccCCC
Confidence 9 9999999998753 111 11223568875 689985 35 468999987 7777765321 01111
Q ss_pred CCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH
Q psy12791 238 VVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA 315 (393)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
...++..+..+...++.+.+ ..++..+..+.+.+.|+++.. ++. +.+.++.|.++.+.+..+.
T Consensus 331 ~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~-----~~~----------v~~vrG~Glm~giel~~~~ 395 (460)
T PRK06916 331 YTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFA-----LKH----------VGDIRQLGLMVGIELVKNK 395 (460)
T ss_pred CCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-----CCC----------eEEeecCCceeeEEeeccc
Confidence 12366676666665554432 334444455555555554211 111 1123566778888774211
Q ss_pred ----------HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHH
Q psy12791 316 ----------EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQ 385 (393)
Q Consensus 316 ----------~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~ 385 (393)
.....+...+...++-+.. ..+.+|+.+.+..++++++.+.+
T Consensus 396 ~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~----------------------------~g~~l~~~Ppl~it~~~id~~~~ 447 (460)
T PRK06916 396 ETKEPFEWTERVGVQVCKRSRELGMLTRP----------------------------LGNTIVFMPPLASTIDELDEMLR 447 (460)
T ss_pred ccccCCCchhhHHHHHHHHHHHCCeEEEe----------------------------cCCEEEEeCCcccCHHHHHHHHH
Confidence 1123444444333322210 12578888888877777777777
Q ss_pred HHHHh
Q psy12791 386 ALRKA 390 (393)
Q Consensus 386 al~~~ 390 (393)
+|++.
T Consensus 448 ~l~~~ 452 (460)
T PRK06916 448 ILYKA 452 (460)
T ss_pred HHHHH
Confidence 76544
No 359
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.30 E-value=7.6e-10 Score=106.58 Aligned_cols=282 Identities=14% Similarity=0.073 Sum_probs=155.8
Q ss_pred CCchHHHHHHHHHHHhC---CCcEEEeccHHHHH-HHHHHh--cC------C------CCeEEEcCCCccchHHHHHHhc
Q psy12791 57 NNPTRRNLERCIASLEE---AKHGLCYSSGLGAV-TAVTHL--LS------A------GDHIISGDDVYGGTYRYFAQVA 118 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~---~~~~i~~~~G~~al-~~~~~~--~~------~------gd~vl~~~~~y~~~~~~~~~~~ 118 (393)
..+...++-++|++... .+...+.+||++|+ .++... .. . +.+|+.-..+|++.........
T Consensus 83 ~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~ 162 (431)
T TIGR03251 83 YTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLT 162 (431)
T ss_pred CCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhcc
Confidence 34556667777777652 23567789999987 444221 10 1 3678888888877532221111
Q ss_pred ccC----C-cEE---Ee--e-----CC-------------CCHHHHHhhc---CCCCcEEEEecCCCCcccccC----HH
Q psy12791 119 PKI----G-LEV---DF--V-----DL-------------RKIENLIKYI---KPNTKMVWIENPTNPLMTVFD----VK 163 (393)
Q Consensus 119 ~~~----g-~~v---~~--~-----~~-------------~d~~~l~~~l---~~~~~~v~l~~p~nptG~~~~----~~ 163 (393)
... + ... .. . +. .+++++++.+ .+++.+|+++..+...|.+.+ ++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~ 242 (431)
T TIGR03251 163 NTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLR 242 (431)
T ss_pred CCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHH
Confidence 100 0 000 00 0 10 0233444444 356889999988888898774 99
Q ss_pred HHHHHHHhCCCcEEEEeCccCccccc------CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHH-H----
Q psy12791 164 AISAVVKQHPDILLVLDNTFLTAYYQ------KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKF-L---- 232 (393)
Q Consensus 164 ~l~~l~~~~~~~~livDea~~~~~~~------~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~-~---- 232 (393)
+|.++|++| |+++|+||++..+-.. .......|+++ ++|.+. + +|++... ++.+.... .
T Consensus 243 ~l~~lc~~~-g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~--~gK~~~-~----~g~~~~~--~i~~~~~~~~~~~~ 312 (431)
T TIGR03251 243 AMRALCDEH-DALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA--FGKKTQ-V----CGIMAGR--RVDEVADNVFAVPS 312 (431)
T ss_pred HHHHHHHHc-CCEEEEecchhccCccchHHHHHhcCCCCCEEE--ecccCc-c----ceEEecc--hHHHhhhhcccCcc
Confidence 999999999 9999999999853110 11234578885 678761 1 5666543 32221110 0
Q ss_pred HHhcCCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEE
Q psy12791 233 QNSMGVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFY 310 (393)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
........++..+..+...++.+.+ ..++..+..+.+.+.|++... .++.+ ..+.++.|.++.+.
T Consensus 313 ~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~~---------i~~vrg~G~~~~i~ 379 (431)
T TIGR03251 313 RLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELAA----EFPHL---------VSNPRGRGLMCAFD 379 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----hCccc---------eecccccceeEEEE
Confidence 0111122456666655555544321 223333444444444432100 01100 01124457788888
Q ss_pred EcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 311 VNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 311 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
+. +.+....+.+.+...++-+... ....+|+++++..++++++.+.++|.+
T Consensus 380 ~~-~~~~~~~~~~~l~~~Gvl~~~~---------------------------g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 380 LP-STADRDEVIRQLYREGVLLLGC---------------------------GERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred eC-CHHHHHHHHHHHHhCCeEEecC---------------------------CCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 84 4555556666665444332110 135799999999999999999888875
No 360
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.30 E-value=1.3e-09 Score=105.20 Aligned_cols=281 Identities=15% Similarity=0.092 Sum_probs=158.1
Q ss_pred CCCchHHHHHHHHHHHhC---CCcEEEeccHHHHH-HHHHHh--c------CC------CCeEEEcCCCccchHHHHHHh
Q psy12791 56 SNNPTRRNLERCIASLEE---AKHGLCYSSGLGAV-TAVTHL--L------SA------GDHIISGDDVYGGTYRYFAQV 117 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~---~~~~i~~~~G~~al-~~~~~~--~------~~------gd~vl~~~~~y~~~~~~~~~~ 117 (393)
+..+...++.++|+++.+ .+...+.+||++|+ .++... . .. ..+|+.-..+|++........
T Consensus 89 ~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~ 168 (443)
T PRK08297 89 VYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSL 168 (443)
T ss_pred cCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhh
Confidence 345666778888888762 23577788899987 444321 1 01 256888888887753222111
Q ss_pred ccc-------CC------cEEEee--CC---C----------CHHHHHhhcC---CCCcEEEEecCCCCcccccC----H
Q psy12791 118 APK-------IG------LEVDFV--DL---R----------KIENLIKYIK---PNTKMVWIENPTNPLMTVFD----V 162 (393)
Q Consensus 118 ~~~-------~g------~~v~~~--~~---~----------d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~----~ 162 (393)
... .. +....+ +. + +++++++.+. +++.+|+++..+...|.+.+ +
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl 248 (443)
T PRK08297 169 TNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFF 248 (443)
T ss_pred cCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHH
Confidence 100 00 000001 10 0 2344445553 46889999888877787764 9
Q ss_pred HHHHHHHHhCCCcEEEEeCccCcc-ccc-----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHH-H---
Q psy12791 163 KAISAVVKQHPDILLVLDNTFLTA-YYQ-----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKF-L--- 232 (393)
Q Consensus 163 ~~l~~l~~~~~~~~livDea~~~~-~~~-----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~-~--- 232 (393)
++|.++|++| |+++|+||++..+ ... .......|+++ ++|.+ ++ +|.+++ .++.+.... .
T Consensus 249 ~~lr~lc~~~-g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l-~~----~a~l~~--~~i~~~~~~~~~~~ 318 (443)
T PRK08297 249 AAMRELCDEH-DALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA--FGKKT-QV----CGIMAG--RRVDEVEDNVFAVS 318 (443)
T ss_pred HHHHHHHHHc-CCEEEEechhhccCccchHHHHHhcCCCCCEEE--ecccc-cc----cceecc--hHHHHhhhhhccCc
Confidence 9999999999 9999999999753 111 11233578885 78987 32 344443 333322211 1
Q ss_pred -HHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcc
Q psy12791 233 -QNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSG 305 (393)
Q Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~ 305 (393)
........++..+..+...++.+. ...++..+..+.+.+.|++ ++.+. .+.++.|.
T Consensus 319 ~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~-----------------~~vrg~G~ 381 (443)
T PRK08297 319 SRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVV-----------------SNVRGRGL 381 (443)
T ss_pred cccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcc-----------------eeeeccce
Confidence 011122245666666555554332 1234444444444444443 22211 11244578
Q ss_pred eEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHH
Q psy12791 306 MLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQ 385 (393)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~ 385 (393)
++.+.+. +.+....+.+.+...++-+... ....+|+++++..++++++.+.+
T Consensus 382 ~~~i~~~-~~~~~~~~~~~l~~~Gvl~~~~---------------------------~~~~lr~~P~l~~t~~eid~~l~ 433 (443)
T PRK08297 382 MCAFDLP-TTADRDEVIRRLWEEGVLVLPC---------------------------GERSIRFRPALTVTTEEIDAAID 433 (443)
T ss_pred EEEEEec-CHHHHHHHHHHHHHCCEEEecC---------------------------CCCeEEEECCccCCHHHHHHHHH
Confidence 8899984 5555566666655444332211 13578999999989888888888
Q ss_pred HHHHhh
Q psy12791 386 ALRKAC 391 (393)
Q Consensus 386 al~~~~ 391 (393)
+|.+..
T Consensus 434 ~l~~~l 439 (443)
T PRK08297 434 ALRRAL 439 (443)
T ss_pred HHHHHH
Confidence 887653
No 361
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.29 E-value=4.5e-10 Score=105.14 Aligned_cols=288 Identities=18% Similarity=0.104 Sum_probs=167.5
Q ss_pred CCCchHHHHHHHHHHHhC-C--CcEEEeccHHHHH-HHHHHh----c---CCC-CeEEEcCCCccchHHH----------
Q psy12791 56 SNNPTRRNLERCIASLEE-A--KHGLCYSSGLGAV-TAVTHL----L---SAG-DHIISGDDVYGGTYRY---------- 113 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~-~--~~~i~~~~G~~al-~~~~~~----~---~~g-d~vl~~~~~y~~~~~~---------- 113 (393)
...| ..+|.++|+++.. . +...+..||++|+ .++... . +|. .+++.-...|++....
T Consensus 85 t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~ 163 (449)
T COG0161 85 THEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVAL 163 (449)
T ss_pred CCch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhh
Confidence 3456 8899999999987 3 2455567778877 544221 1 233 3477777777653211
Q ss_pred HHHhcccCCcEEEeeCCC-----------C------HHHHHhhcC----CCCcEEEEecCCCC-cccccC----HHHHHH
Q psy12791 114 FAQVAPKIGLEVDFVDLR-----------K------IENLIKYIK----PNTKMVWIENPTNP-LMTVFD----VKAISA 167 (393)
Q Consensus 114 ~~~~~~~~g~~v~~~~~~-----------d------~~~l~~~l~----~~~~~v~l~~p~np-tG~~~~----~~~l~~ 167 (393)
+.......-..+..++.. + .+++++.+. ++..+++++....- .|.++| ++++.+
T Consensus 164 ~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~ 243 (449)
T COG0161 164 RHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVRE 243 (449)
T ss_pred hhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHH
Confidence 101111111112222221 1 345555553 34678888777666 788886 999999
Q ss_pred HHHhCCCcEEEEeCccCcccc------cCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH-H----Hhc
Q psy12791 168 VVKQHPDILLVLDNTFLTAYY------QKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL-Q----NSM 236 (393)
Q Consensus 168 l~~~~~~~~livDea~~~~~~------~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~-~----~~~ 236 (393)
+|++| |+++|.||+-..+-- ........|+++ ++|.++ -.-+.+|.++++ +++.+.+..- . ..+
T Consensus 244 iC~ky-~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~--~aKGLT-~GY~Pl~a~l~~-~~I~~~~~~~~~~~f~HG~ 318 (449)
T COG0161 244 ICDKY-GILLIADEVATGFGRTGKMFACEHAGIVPDILC--LAKGLT-GGYLPLSAVLTS-DRIYEAFSDGDAGAFMHGH 318 (449)
T ss_pred HHHHc-CcEEEeecceeCCCcCchhhhhhhcCCCCCeee--eccccc-ccchhhHhHhhh-HHHHHHHhcccCCeeccCC
Confidence 99999 999999998876311 112223568886 669885 344567878877 7787777542 1 122
Q ss_pred CCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEE
Q psy12791 237 GVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFY 310 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
.-+..|..++.+++.++-+++ ..++..+....+.+.|++ +|.|. +.++.|-+..++
T Consensus 319 TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~Vg------------------dVR~~Gli~~iE 380 (449)
T COG0161 319 TYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVG------------------DVRGLGLIGAIE 380 (449)
T ss_pred ccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEE------------------EeeccceEEEEE
Confidence 334568888888877765432 344444445555555553 22332 224556666777
Q ss_pred EcCCHH--------HHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHH
Q psy12791 311 VNGGAE--------ETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIAD 382 (393)
Q Consensus 311 ~~~~~~--------~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~ 382 (393)
+..+.+ ...++.+.....++-+.+.+..-...+| ++++.++.+++++.
T Consensus 381 lv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g~~i~~~PP------------------------liit~~eid~l~~~ 436 (449)
T COG0161 381 LVADKATKTPFEARVGARVRAAALERGLLIRPLGDVIYLMPP------------------------LIITREEIDELVDA 436 (449)
T ss_pred EecccccccchhhhHHHHHHHHHHHCCeEEeecCCEEEEcCC------------------------ccCCHHHHHHHHHH
Confidence 643222 2445555554556666555442222333 56666777777777
Q ss_pred HHHHHHHhh
Q psy12791 383 LDQALRKAC 391 (393)
Q Consensus 383 l~~al~~~~ 391 (393)
+.++++...
T Consensus 437 l~~al~~~~ 445 (449)
T COG0161 437 LREALDETL 445 (449)
T ss_pred HHHHHHHHH
Confidence 777777543
No 362
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.28 E-value=7.2e-11 Score=107.89 Aligned_cols=172 Identities=15% Similarity=0.169 Sum_probs=123.6
Q ss_pred HHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCC----CccchHHHHHHhcccCCcEEEeeCCC---CHHH
Q psy12791 64 LERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDD----VYGGTYRYFAQVAPKIGLEVDFVDLR---KIEN 135 (393)
Q Consensus 64 lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~----~y~~~~~~~~~~~~~~g~~v~~~~~~---d~~~ 135 (393)
+.+.++...+++++.++++.+.++ .++.++.. +.+|+++.- .|+. ....+.+..|++++++... ...+
T Consensus 73 ~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~-~~EvVis~g~lV~gg~~---~v~d~~~~aG~~l~EvG~tn~t~~~d 148 (395)
T COG1921 73 LAELLCGLTGAEAAAIVNNNAAAVLLTLNALAE-GKEVVVSRGELVEGGAF---RVPDIIRLAGAKLVEVGTTNRTHLKD 148 (395)
T ss_pred HHHHHhcccchhheeeECCcHHHHHHHHhhhcc-CCeEEEEccccccCCCC---ChhHHHHHcCCEEEEecccCcCCHHH
Confidence 344444445556788888888887 66666665 545655421 1222 3678889999999998654 6889
Q ss_pred HHhhcCCCCcEEEEecCCCC-cccccCHHHHHHHHHhCCCcEEEEeCccCcccc-----cCCCCCcCcEEEEcccccccC
Q psy12791 136 LIKYIKPNTKMVWIENPTNP-LMTVFDVKAISAVVKQHPDILLVLDNTFLTAYY-----QKSLPWGVDIVLYSLTKYMNG 209 (393)
Q Consensus 136 l~~~l~~~~~~v~l~~p~np-tG~~~~~~~l~~l~~~~~~~~livDea~~~~~~-----~~~~~~~~di~~~S~sK~~~G 209 (393)
++.++.+++++++-.+-+|- .=...+.+++.++|+++ ++++++|.+.+..+. +..+..|+|+|++|..|.++|
T Consensus 149 ~~~AIne~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~-~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgG 227 (395)
T COG1921 149 YELAINENTALLLKVHSSNYGFTGMLSEEELVEIAHEK-GLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGG 227 (395)
T ss_pred HHHHhccCCeeEEEEeeccccccccccHHHHHHHHHHc-CCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCC
Confidence 99999999887776555543 22344688999999999 999999998865432 122346899999999999976
Q ss_pred CCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHH
Q psy12791 210 HSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFD 244 (393)
Q Consensus 210 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (393)
| +.|.++++ ++++++++......+.-.....
T Consensus 228 P---qaGii~Gk-KelI~~lq~~~l~Ralrv~K~t 258 (395)
T COG1921 228 P---QAGIIVGK-KELIEKLQSHPLKRALRVDKET 258 (395)
T ss_pred C---ccceEech-HHHHHHHHhhhhhhhhhcCcHh
Confidence 5 59999998 9999999877665554444433
No 363
>PRK07483 hypothetical protein; Provisional
Probab=99.27 E-value=2.8e-09 Score=102.90 Aligned_cols=290 Identities=15% Similarity=0.104 Sum_probs=160.0
Q ss_pred CCCchHHHHHHHHHHHhC--CCcEEEeccHHHHH-HHHHH--hc-----CCC-CeEEEcCCCccchHHHHHHhcc-----
Q psy12791 56 SNNPTRRNLERCIASLEE--AKHGLCYSSGLGAV-TAVTH--LL-----SAG-DHIISGDDVYGGTYRYFAQVAP----- 119 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~--~~~~i~~~~G~~al-~~~~~--~~-----~~g-d~vl~~~~~y~~~~~~~~~~~~----- 119 (393)
+.++...+|.+.|++... .+...+.+||++|+ .++.. .. +++ .+|+.-...|++.......+..
T Consensus 70 ~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~ 149 (443)
T PRK07483 70 FTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRR 149 (443)
T ss_pred cCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccc
Confidence 346777889999988764 24577788889886 44421 12 123 4678778778764321111100
Q ss_pred -cCC---cEEEeeCC----CC--------------HHHHHhhcC----CCCcEEEEecCCC-CcccccC----HHHHHHH
Q psy12791 120 -KIG---LEVDFVDL----RK--------------IENLIKYIK----PNTKMVWIENPTN-PLMTVFD----VKAISAV 168 (393)
Q Consensus 120 -~~g---~~v~~~~~----~d--------------~~~l~~~l~----~~~~~v~l~~p~n-ptG~~~~----~~~l~~l 168 (393)
.++ ..+..++. .+ ++++++.+. +++.+|+++..+. ..|.+.+ +++|.++
T Consensus 150 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~l 229 (443)
T PRK07483 150 EPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREV 229 (443)
T ss_pred cccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHH
Confidence 011 11222221 11 245555442 4578999988775 3476665 8999999
Q ss_pred HHhCCCcEEEEeCccCccc------ccCCCCCcCcEEEEcccccccCCCCc-eEEEEEecChHHHHHHHHHH----HhcC
Q psy12791 169 VKQHPDILLVLDNTFLTAY------YQKSLPWGVDIVLYSLTKYMNGHSDV-VMGATVTNDDSLQARLKFLQ----NSMG 237 (393)
Q Consensus 169 ~~~~~~~~livDea~~~~~------~~~~~~~~~di~~~S~sK~~~G~~G~-r~G~~~~~~~~~~~~~~~~~----~~~~ 237 (393)
|++| |+++|+||++..+- .........|+++ ++|.++ .|+ .+|.++++ +++.+.+.... ....
T Consensus 230 c~~~-gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~--gG~~Pi~av~~~-~~i~~~~~~~~~~~~h~~T 303 (443)
T PRK07483 230 CDRY-GVLLILDEVMCGMGRTGTLFACEEDGVAPDLVT--IAKGLG--AGYQPIGAVLAS-DRIYDAIADGSGFFQHGHT 303 (443)
T ss_pred HHHh-CCEEEEecceeCcccCcHHHHHhhcCCCCCeee--ehhhhc--cCccccEEEEEc-HHHHHHHhcCCCccccCCC
Confidence 9999 99999999988531 1112233578875 579995 353 68999987 77777664211 1112
Q ss_pred CCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEE
Q psy12791 238 VVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYV 311 (393)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
...++..+..+.+.++.+++ ..++..+..+.+.+.|++ ++.+. +.++.|.++.+.+
T Consensus 304 ~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~------------------~vRG~Glm~gie~ 365 (443)
T PRK07483 304 YLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVG------------------DIRGRGLFVGVEL 365 (443)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCee------------------eEeecccEEEEEE
Confidence 22456776666665554432 233333334444444432 22222 2255677888877
Q ss_pred cCCH----------HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHH
Q psy12791 312 NGGA----------EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIA 381 (393)
Q Consensus 312 ~~~~----------~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~ 381 (393)
..+. +....+.+.+...++-+...+.. . .|..++.|||.+.+.-++++++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~--~------------------~~~~~~~l~~~PpL~it~~eid 425 (443)
T PRK07483 366 VADRATKAPFDPALKLHARIKREAMARGLMVYPMGGT--I------------------DGVRGDHVLLAPPFIITAAQID 425 (443)
T ss_pred eecccccCCCCchhhHHHHHHHHHHHCCcEEEecCcc--c------------------cCCCCCEEEEECCCCCCHHHHH
Confidence 3211 12344554444333332211000 0 0011367898887777766666
Q ss_pred HHHHHHHH
Q psy12791 382 DLDQALRK 389 (393)
Q Consensus 382 ~l~~al~~ 389 (393)
.+.++|++
T Consensus 426 ~~~~~l~~ 433 (443)
T PRK07483 426 EIVERLGD 433 (443)
T ss_pred HHHHHHHH
Confidence 66665554
No 364
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.27 E-value=9.8e-11 Score=110.17 Aligned_cols=218 Identities=19% Similarity=0.179 Sum_probs=139.9
Q ss_pred CchHHHHHHH----HHHHhCCC---------cEEEeccHHHHH-HHHHHh----c----CCC-----C-eEEEcCCCccc
Q psy12791 58 NPTRRNLERC----IASLEEAK---------HGLCYSSGLGAV-TAVTHL----L----SAG-----D-HIISGDDVYGG 109 (393)
Q Consensus 58 ~~~~~~lr~~----la~~~~~~---------~~i~~~~G~~al-~~~~~~----~----~~g-----d-~vl~~~~~y~~ 109 (393)
.|...+++.. +++++|.+ ..+++++|+.++ .++.+. . ..| + .|++++-+|.+
T Consensus 74 ~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S 153 (373)
T PF00282_consen 74 SPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYS 153 (373)
T ss_dssp SHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-TH
T ss_pred ccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccH
Confidence 4666666555 56667766 256777777774 444321 1 112 2 46677767874
Q ss_pred hHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC---C---CcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEE
Q psy12791 110 TYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP---N---TKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLV 178 (393)
Q Consensus 110 ~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~---~---~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~li 178 (393)
+.+++...|+.++.+|.+ |+++|++.+.. + +-+|+.+..+..||.+=|+++|.++|+++ ++|++
T Consensus 154 ----~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~-~~wlH 228 (373)
T PF00282_consen 154 ----IEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKY-NIWLH 228 (373)
T ss_dssp ----HHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHC-T-EEE
T ss_pred ----HHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhcccc-ceeee
Confidence 788899999999999886 67888877643 2 22566689999999999999999999999 99999
Q ss_pred EeCccCcccccCC----CC---CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH-HHHHh---------------
Q psy12791 179 LDNTFLTAYYQKS----LP---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK-FLQNS--------------- 235 (393)
Q Consensus 179 vDea~~~~~~~~~----~~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~-~~~~~--------------- 235 (393)
||.+|+......+ .. ..+|-+..++||++. .|- ..|++..+++....... ....+
T Consensus 229 VDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~-~P~-~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~ 306 (373)
T PF00282_consen 229 VDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLG-VPY-GCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYG 306 (373)
T ss_dssp EEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS--SS-S-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEE
T ss_pred ecccccccccccccccccccccccccccccchhhhhc-CCc-cceeEEeecccchHHHhccChhhhcccccccccccccc
Confidence 9999998433211 11 257899999999995 433 48898888765444221 00000
Q ss_pred -cCCCCC----HHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhhCCCcceE
Q psy12791 236 -MGVVPS----PFDCWLVTR--GLKTLPCRLKEHERGSIEVAKFLESHPCVKGV 282 (393)
Q Consensus 236 -~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v 282 (393)
.+...+ .+..|+.++ +.+.+.+++++..+.++++.+.|++.+.++.+
T Consensus 307 ~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~ 360 (373)
T PF00282_consen 307 DYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELV 360 (373)
T ss_dssp EGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEES
T ss_pred cccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 011111 122333333 44567778888899999999999998886533
No 365
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.25 E-value=5.8e-09 Score=95.29 Aligned_cols=188 Identities=15% Similarity=0.207 Sum_probs=129.5
Q ss_pred eeeCCCCCCCCCccccCCCCchH-------HHHHHHHHHHhCCC--cEEEeccHHHHH-HHHHH--hcC-CCCeEEEcCC
Q psy12791 39 FKQNTPGQPPQGFEYSRSNNPTR-------RNLERCIASLEEAK--HGLCYSSGLGAV-TAVTH--LLS-AGDHIISGDD 105 (393)
Q Consensus 39 ~~~~~~~~~~~~~~y~~~~~~~~-------~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~~--~~~-~gd~vl~~~~ 105 (393)
+.+.+.+++...-.|+.|..... -+++..++++.|.+ ++-++-.++.+- .++++ .-+ +.++++++..
T Consensus 93 I~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~ 172 (450)
T COG0403 93 ILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKD 172 (450)
T ss_pred HHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCC
Confidence 33344444444445666632221 34566788888877 455554444333 33332 222 3579999999
Q ss_pred CccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcc-cccCHHHHHHHHHhCCCcEEEEeC-cc
Q psy12791 106 VYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLM-TVFDVKAISAVVKQHPDILLVLDN-TF 183 (393)
Q Consensus 106 ~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG-~~~~~~~l~~l~~~~~~~~livDe-a~ 183 (393)
.|+.+...++..++-.|++++.++.+|+++++++...++..+++.+|+ -.| ...++.+|.+.+|++ ++++++=. .-
T Consensus 173 vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~~~~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~-~al~~v~aDpl 250 (450)
T COG0403 173 VHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESADDGDVFGVLVQYPN-TFGIVEEDLRALIEAAHSA-GALVIVAADPL 250 (450)
T ss_pred CCHHHHHHHHhhcccCceEEEEeccchhhhhhhccccCeEEEEEecCC-CCCccchhHHHHHHHHhhc-CCEEEEEechh
Confidence 999988888888899999999999999999999833468999999999 556 666799999999999 87766542 22
Q ss_pred CcccccCCCCCcCcEEEEccccccc--CCCCceEEEEEecChHHHHHH
Q psy12791 184 LTAYYQKSLPWGVDIVLYSLTKYMN--GHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 184 ~~~~~~~~~~~~~di~~~S~sK~~~--G~~G~r~G~~~~~~~~~~~~~ 229 (393)
+......|-.+|+||++++..-.-- |..|--.||+.++ +++..++
T Consensus 251 aL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~-~~~~R~m 297 (450)
T COG0403 251 ALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVK-DEFKRQM 297 (450)
T ss_pred HhhccCCccccCCceEEecCcccCCCcCCCCcceeeeeEh-HhHhhcC
Confidence 3344556777899999999877311 2333359999987 6665543
No 366
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.20 E-value=5.5e-10 Score=106.75 Aligned_cols=156 Identities=15% Similarity=0.201 Sum_probs=122.2
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---- 131 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---- 131 (393)
.....+.++..|+.+|++...+++||++. + .++++++.+||.|+++..+|-+. ....-..|+..+++...
T Consensus 69 ~G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi----~~glilaGa~Pvyl~p~~np~ 144 (557)
T COG1982 69 EGPIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSI----HHGLILAGATPVYLEPSRNPL 144 (557)
T ss_pred CccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHH----HHHHHHcCCceEEecCCCCcc
Confidence 45678899999999999999999999886 7 88899999999999999999873 33356678888877542
Q ss_pred -------CHHHHHhhcCC--CC-cEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC------CCCc
Q psy12791 132 -------KIENLIKYIKP--NT-KMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS------LPWG 195 (393)
Q Consensus 132 -------d~~~l~~~l~~--~~-~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~------~~~~ 195 (393)
+.+.+.+.+.+ .. |++++++|+ -.|.+++.++|.++++.. ++|+.+|+++.......+ ...+
T Consensus 145 ~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpT-YdGv~~n~~~i~~~~~~~-~a~v~~deah~~~~~~~~~l~~~~~~~~ 222 (557)
T COG1982 145 YGIIGGIPLETFKEALLAHPDAEKLAVITNPT-YDGVCYNLRKIVELLHHY-GAWVLYDEAHPAHFDFSPMLPESALNGG 222 (557)
T ss_pred ccccCCCCHHHHHHHHHhChhhheeEEEecCc-cceEeecHHHHHHHHhhc-CceEEhhhcCcccccccccCcchhhhcC
Confidence 56777776543 35 889999998 459999999999999999 999999999886433222 1247
Q ss_pred CcEEEEcccccccCCCCceEEEEEec
Q psy12791 196 VDIVLYSLTKYMNGHSDVVMGATVTN 221 (393)
Q Consensus 196 ~di~~~S~sK~~~G~~G~r~G~~~~~ 221 (393)
.|+++.|.||.++++.- ..++-.+
T Consensus 223 ~~~~tqS~HK~l~alSQ--aS~iHv~ 246 (557)
T COG1982 223 ADFVTQSTHKLLAALSQ--ASMIHVK 246 (557)
T ss_pred ceEEEechhhhhhhhhh--hHHHhhC
Confidence 89999999999854432 4444444
No 367
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.19 E-value=2.8e-09 Score=99.97 Aligned_cols=270 Identities=14% Similarity=0.097 Sum_probs=147.6
Q ss_pred HHHHHHHHHHhCCCc-EEEeccHHHHH--HHHH--Hhc-CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHH
Q psy12791 62 RNLERCIASLEEAKH-GLCYSSGLGAV--TAVT--HLL-SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIEN 135 (393)
Q Consensus 62 ~~lr~~la~~~~~~~-~i~~~~G~~al--~~~~--~~~-~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~ 135 (393)
-+++..++++.|.+- +.-+-.|++|. .+++ ... +.+++|+++.-.|+.+.......+...|++++.++.++-..
T Consensus 113 fe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~ 192 (429)
T PF02347_consen 113 FEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGT 192 (429)
T ss_dssp HHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCS
T ss_pred HHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCC
Confidence 567888999999872 22333333332 2222 222 33469999999999876666677888999999998753111
Q ss_pred HHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCc--ccccCCCCCcCcEEEEccccccc-----
Q psy12791 136 LIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLT--AYYQKSLPWGVDIVLYSLTKYMN----- 208 (393)
Q Consensus 136 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~--~~~~~~~~~~~di~~~S~sK~~~----- 208 (393)
.. ++++.+|++++|| -.|.+-++++|.+++|++ |+++++ .+--. .....|-++|+||++++ +|.|+
T Consensus 193 ~d---~~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~-gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~ 265 (429)
T PF02347_consen 193 TD---DDDTAAVMVQNPN-TFGVFEDIKEIADIAHAA-GALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGF 265 (429)
T ss_dssp B----STTEEEEEEESS--TTSB--THHHHHHHHHHT-T-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CC
T ss_pred cc---ccCeEEEEeecCC-CCceEeeHHHHHHHHHHc-CCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCC
Confidence 11 5679999999999 559999999999999999 998887 43322 23346667899999887 88664
Q ss_pred CCCCceEEEEEecChHHHHHHHHHH-------------------------H----hcCCCCCHHH-----HHHHHhccCC
Q psy12791 209 GHSDVVMGATVTNDDSLQARLKFLQ-------------------------N----SMGVVPSPFD-----CWLVTRGLKT 254 (393)
Q Consensus 209 G~~G~r~G~~~~~~~~~~~~~~~~~-------------------------~----~~~~~~~~~~-----~~~~~~~~~~ 254 (393)
|-|+ .|++.++ +++...+.... . ...++...+. .++...+-+.
T Consensus 266 GGP~--~G~~a~~-~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~G 342 (429)
T PF02347_consen 266 GGPG--AGFFAVR-EDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEG 342 (429)
T ss_dssp C-S----EEEEE--GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHH
T ss_pred CCCC--eeeEEEh-hhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHH
Confidence 3444 8999998 66665553110 0 0011111221 2233333345
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcccccccc
Q psy12791 255 LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESL 334 (393)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 334 (393)
+.+.-++...++.++.+.|..... ..+.+ ..+-..+.+.. +. .....++++....++...
T Consensus 343 L~~iA~~~~~~A~yl~~~L~~~~~---~~~~~--------------~~f~e~v~~~~-~~-~~~~~l~~~~~~~gl~~~- 402 (429)
T PF02347_consen 343 LREIAERIHLNAHYLAERLKKIYG---LPFDN--------------PFFFEFVVVFS-KD-KEVEELLKRGIEGGLNLR- 402 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTB---ECSSS--------------SSBSSEEEEES-S--HHHHHHHHTT----EEEG-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---cccCC--------------CCceeeeeecC-Cc-HHHHHHHHHHHhcCCCcc-
Confidence 555666677888888888876421 22221 11112343333 23 455556665544331110
Q ss_pred CCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 335 GGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 335 g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
. ...+.+-++++..+++++++++.++|
T Consensus 403 ---------~-----------------~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 403 ---------Y-----------------PDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp ---------G-----------------G-SSEEEEE--TT--HHHHHHHHH--
T ss_pred ---------c-----------------cCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 0 01457889999999999999998875
No 368
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.19 E-value=3.2e-09 Score=108.41 Aligned_cols=158 Identities=16% Similarity=0.244 Sum_probs=113.9
Q ss_pred HHHHHHHHHHhCCC--cEEEeccHHHHH-HHHHHh-c--CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHH
Q psy12791 62 RNLERCIASLEEAK--HGLCYSSGLGAV-TAVTHL-L--SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIEN 135 (393)
Q Consensus 62 ~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~~~-~--~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~ 135 (393)
-+++..++++.|.+ ++-+...++.+. .++++. . +++++|++++-.|+.+...++..++..|++++.++ .++
T Consensus 112 ~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~---~~~ 188 (939)
T TIGR00461 112 LNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD---CSD 188 (939)
T ss_pred HHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc---HHH
Confidence 45778899999988 334444443333 233332 2 23478999999999887777777789999999985 455
Q ss_pred HHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccc-ccCCCCCcCcEEEEccccccc----CC
Q psy12791 136 LIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAY-YQKSLPWGVDIVLYSLTKYMN----GH 210 (393)
Q Consensus 136 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~-~~~~~~~~~di~~~S~sK~~~----G~ 210 (393)
+++.+ ++.++++.+|| -.|.+.|+++|.+++|+. |++++++.-..... ...|-++|+||++++..++.. |-
T Consensus 189 l~~~~--~~~~v~~q~Pn-~~G~ied~~~i~~~~h~~-gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GG 264 (939)
T TIGR00461 189 IKKAV--DVFGCLLQYPA-TDGSILDYKQLIDALHSH-KSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGG 264 (939)
T ss_pred HhhcC--CEEEEEEECCC-CCeEEecHHHHHHHHHHc-CCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCC
Confidence 66555 57788888997 569999999999999999 99999966544432 345667899999887766432 33
Q ss_pred CCceEEEEEecChHHHHHH
Q psy12791 211 SDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 211 ~G~r~G~~~~~~~~~~~~~ 229 (393)
|+ .|++.++ +++...+
T Consensus 265 P~--aG~~a~~-~~l~r~l 280 (939)
T TIGR00461 265 PH--AAFFAVK-DEYNRKM 280 (939)
T ss_pred Cc--eeeeeec-HhhHhhC
Confidence 44 9999997 6666655
No 369
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.18 E-value=3.9e-09 Score=101.62 Aligned_cols=202 Identities=11% Similarity=0.068 Sum_probs=118.8
Q ss_pred HHHHHhhcC---CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-c-----CCCCC--cCc
Q psy12791 133 IENLIKYIK---PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-Q-----KSLPW--GVD 197 (393)
Q Consensus 133 ~~~l~~~l~---~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~-----~~~~~--~~d 197 (393)
++.+++.+. +++.+|+++......|.+.+ +++|.++|+++ |+++|+||++..+-. . ..... ..|
T Consensus 238 l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~-g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PD 316 (464)
T TIGR00699 238 LEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH-NVAFIVDEVQTGVGATGKFWAHEHWNLDDPPD 316 (464)
T ss_pred HHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeeeeeCCCCCcchhHHHhcCCCCCCC
Confidence 445566653 35789999999888899887 99999999999 999999999865311 1 11122 277
Q ss_pred EEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhh
Q psy12791 198 IVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLES 275 (393)
Q Consensus 198 i~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~ 275 (393)
+++ ++|.++ . .|+++.+ +.+ ..............++..+..+.+.++.+.+ ..++..+....+.+.|++
T Consensus 317 i~t--~gK~lg-~----gG~~~~~-~~~-~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~ 387 (464)
T TIGR00699 317 MVT--FSKKFQ-T----AGYFFHD-PAF-RPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLED 387 (464)
T ss_pred EEE--ehhhhc-c----CCccccc-hhc-cCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 764 689983 2 2344433 221 1100111111223356666555555443321 222332333444444432
Q ss_pred ----CC-CcceEeCCCCCCCcchHHHhhhcC--CCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCccccc
Q psy12791 276 ----HP-CVKGVLHPGLPSHPNHELAKSQWS--GTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMT 348 (393)
Q Consensus 276 ----~~-~~~~v~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~ 348 (393)
+| .+. +.+ +.|.++.+.++ +...+..+.+.+...++-+..
T Consensus 388 l~~~~~~~i~------------------~vRg~G~Glm~gie~~-~~~~~~~i~~~~~~~Gvl~~~-------------- 434 (464)
T TIGR00699 388 LQKKYPEFIQ------------------NLRGKGRGTFIAWDTP-DEAKRDKLLKKARNNGVNIGG-------------- 434 (464)
T ss_pred HHHhCCCcee------------------eecccCeEEEEEEecC-CHHHHHHHHHHHHHCCcEEec--------------
Confidence 23 121 223 56788888884 555566777666544432211
Q ss_pred CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 349 HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 349 ~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.....|||++.+..++++++.+.++|.+.
T Consensus 435 -------------~g~~~ir~~Ppl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 435 -------------CGVKAIRLRPMLVFQKHHADIFLEIISKI 463 (464)
T ss_pred -------------CCCCeEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 01368999999999999999999888764
No 370
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.17 E-value=4.3e-10 Score=104.88 Aligned_cols=194 Identities=17% Similarity=0.150 Sum_probs=122.8
Q ss_pred CCCchHHHHHHHHHHHhC--CCcEEEeccHHHHH-HHHHH-h------c-CCCCeEEEcCCCccchHHH---------HH
Q psy12791 56 SNNPTRRNLERCIASLEE--AKHGLCYSSGLGAV-TAVTH-L------L-SAGDHIISGDDVYGGTYRY---------FA 115 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~--~~~~i~~~~G~~al-~~~~~-~------~-~~gd~vl~~~~~y~~~~~~---------~~ 115 (393)
+..+...+|.+.|.+..+ .+...+.+||++|+ .++.. . . ....+|+....+|++.... +.
T Consensus 56 ~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~ 135 (339)
T PF00202_consen 56 FTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYR 135 (339)
T ss_dssp SEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHH
T ss_pred eeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcccc
Confidence 345677889999999884 34677889999987 55432 2 2 2346788888888763321 11
Q ss_pred HhcccCCcEEEeeCCCCHHH----------HH----hhcCCCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEE
Q psy12791 116 QVAPKIGLEVDFVDLRKIEN----------LI----KYIKPNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILL 177 (393)
Q Consensus 116 ~~~~~~g~~v~~~~~~d~~~----------l~----~~l~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~l 177 (393)
.........+..+|.+++.. ++ +.-.++..+|+++..+...|...+ +++|.++|+++ |+++
T Consensus 136 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~-gill 214 (339)
T PF00202_consen 136 KGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREH-GILL 214 (339)
T ss_dssp TTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHT-T-EE
T ss_pred ccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehccccccc-ccce
Confidence 11122223456677766544 22 222345789999988877777664 89999999999 9999
Q ss_pred EEeCccCccc-ccCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Q psy12791 178 VLDNTFLTAY-YQKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRG 251 (393)
Q Consensus 178 ivDea~~~~~-~~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (393)
|+||++..+. .... ....+|+++. +|.++ .|+.+|.++++ +++.+.+............+..+..+.+.
T Consensus 215 I~DEV~tG~gRtG~~~a~~~~gv~PDiv~~--gK~l~--gG~p~sav~~~-~~i~~~~~~~~~~~T~~g~p~~~aaa~~~ 289 (339)
T PF00202_consen 215 IADEVQTGFGRTGKFFASEHYGVDPDIVTF--GKGLG--GGLPISAVLGS-EEIMEAFQPGSHGSTFGGNPLSCAAALAT 289 (339)
T ss_dssp EEEETTTTTTTTSSSSGHHHHTSSSSEEEE--EGGGG--TTSSEEEEEEE-HHHHTTSCTTSSTCTTTT-HHHHHHHHHH
T ss_pred ecccccccccccCCccceecccccCccccc--ccchh--hhhhccccccc-chhhccccccccccccccchHhhhhhhhH
Confidence 9999999742 1111 2235789875 59996 34789999998 77777553222222223456666666655
Q ss_pred cCCH
Q psy12791 252 LKTL 255 (393)
Q Consensus 252 ~~~~ 255 (393)
++.+
T Consensus 290 l~~~ 293 (339)
T PF00202_consen 290 LEIL 293 (339)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 5443
No 371
>KOG1402|consensus
Probab=99.13 E-value=1.4e-08 Score=89.42 Aligned_cols=233 Identities=17% Similarity=0.169 Sum_probs=137.8
Q ss_pred hHHHHHHHHHHHhCCCcEEEeccHHHHH-HHH--HH---h-cC--CCC--eEEEcCCCccchH-HHH-----HHhcccCC
Q psy12791 60 TRRNLERCIASLEEAKHGLCYSSGLGAV-TAV--TH---L-LS--AGD--HIISGDDVYGGTY-RYF-----AQVAPKIG 122 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~--~~---~-~~--~gd--~vl~~~~~y~~~~-~~~-----~~~~~~~g 122 (393)
...++.+.+.++++.+..+-..+|++|. .++ .. . .+ |.+ +++.....|++.. ... ....+.+|
T Consensus 102 ~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fg 181 (427)
T KOG1402|consen 102 VLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFG 181 (427)
T ss_pred hHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccC
Confidence 3456677777788877777788898876 333 11 1 12 322 3444444554310 000 00111222
Q ss_pred ----cEEEeeCCCCHHHHHhhcCC-CCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-----
Q psy12791 123 ----LEVDFVDLRKIENLIKYIKP-NTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY----- 188 (393)
Q Consensus 123 ----~~v~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~----- 188 (393)
..+..+|.+|.++++.++++ +.++++++..+...|++.| +++..++|.+| ++++|.||+|....-
T Consensus 182 p~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtky-nvl~I~DEvQTGl~RTGk~l 260 (427)
T KOG1402|consen 182 PFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKY-NVLLIADEVQTGLARTGKLL 260 (427)
T ss_pred CCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhh-cEEEEehhhhhcccccCcEE
Confidence 12566777899999999976 4788888999999999998 89999999999 999999999986211
Q ss_pred -cCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHH
Q psy12791 189 -QKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSI 267 (393)
Q Consensus 189 -~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (393)
........|+++ +.|.++|- =+.+..+.++ ++++-.++.-.....-..+|+.+..+.+.++.+ .-+++.+++.
T Consensus 261 a~d~env~PDivi--lgKalSGG-~~Pvsavl~~-~~im~~~~pgeHgsTyggNpLg~~vaiAalevi--~eekL~era~ 334 (427)
T KOG1402|consen 261 ACDYENVRPDIVI--LGKALSGG-VYPVSAVLAD-DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVI--VEEKLVERAA 334 (427)
T ss_pred EeehhhcCCCeEE--EeccccCC-eeeeEEEEec-HHHHhccCCCccccccCCChHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 111123468887 55998731 1345556665 677665543333222233566666665555544 2344455555
Q ss_pred HH----HHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc
Q psy12791 268 EV----AKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN 312 (393)
Q Consensus 268 ~l----~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
.+ ...|..++. .+|. ++...+|.|-+..+.+.
T Consensus 335 ~lG~~l~~~L~~l~~----~~p~---------~v~~VRGrGl~~ai~i~ 370 (427)
T KOG1402|consen 335 KLGEILRDQLNKLQK----KFPH---------VVKEVRGRGLLNAIVIN 370 (427)
T ss_pred HHHHHHHHHHHhccc----cccc---------hhheeeccceEEEEEec
Confidence 55 444443322 1122 23344666667777774
No 372
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.10 E-value=2.1e-08 Score=102.35 Aligned_cols=196 Identities=15% Similarity=0.163 Sum_probs=119.3
Q ss_pred CCcEEEEecC-CCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccc-c-----cCCCCCcCcEEEEcccccccCCC
Q psy12791 143 NTKMVWIENP-TNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAY-Y-----QKSLPWGVDIVLYSLTKYMNGHS 211 (393)
Q Consensus 143 ~~~~v~l~~p-~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~-~-----~~~~~~~~di~~~S~sK~~~G~~ 211 (393)
+..+|+++.. +.-.|.+++ +++|.++|+++ |+++|.||++..+. . ........||++ ++|.++ .
T Consensus 584 ~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~-gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~--~gKgLt--g 658 (817)
T PLN02974 584 HIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSR-KIPVIFDEVFTGLWRLGVESAWELLGCKPDIAC--YAKLLT--G 658 (817)
T ss_pred CEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHh-CCEEEEeecccCCCcccchhhHHhcCCCCCEEe--eccccc--C
Confidence 4678888874 677788876 89999999999 99999999998742 1 112233578886 669995 3
Q ss_pred C-ceEEEEEecChHHHHHHHHH------HHhcCCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHH----H----HHHh
Q psy12791 212 D-VVMGATVTNDDSLQARLKFL------QNSMGVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEV----A----KFLE 274 (393)
Q Consensus 212 G-~r~G~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l----~----~~l~ 274 (393)
| +.+|.++++ +++.+.+... .....-...|..++.+.+.++.+++ ..+...++...+ . +.|.
T Consensus 659 G~~Plaa~l~~-~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~ 737 (817)
T PLN02974 659 GLVPLAATLAT-EEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAIS 737 (817)
T ss_pred CCCccEEEEEc-HHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 469999997 8888876421 1112223467777777666654432 112222222222 2 2233
Q ss_pred hCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH-------HHHHHHHHhcC-ccccccccCCccccccCccc
Q psy12791 275 SHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA-------EETRIFLESLL-IFRCAESLGGIESLADLPAE 346 (393)
Q Consensus 275 ~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~ 346 (393)
.+|.+..+ ++.|.++.+++..+. .....+.+.+. ..++-+. +
T Consensus 738 ~~p~V~~V------------------Rg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r----------~-- 787 (817)
T PLN02974 738 SLPNVERV------------------VSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYAR----------P-- 787 (817)
T ss_pred hCCCeeEE------------------EeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEE----------e--
Confidence 34444333 455778888885321 12233333333 2222111 1
Q ss_pred ccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 347 MTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 347 ~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..+.||+...+..++++++.+.+++.+.
T Consensus 788 ----------------~Gnvi~l~pP~~i~~e~l~~~~~~l~~~ 815 (817)
T PLN02974 788 ----------------LGNVVYLMCGPTTSPETCTRLLRKVYRR 815 (817)
T ss_pred ----------------cCCEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 0367888888899999999888888753
No 373
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.10 E-value=7.6e-09 Score=96.66 Aligned_cols=215 Identities=15% Similarity=0.018 Sum_probs=131.7
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHH-HHHHHHhcC-CCCeEEEcCC----CccchHHHHHHhcccCCcEEEeeC-
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGA-VTAVTHLLS-AGDHIISGDD----VYGGTYRYFAQVAPKIGLEVDFVD- 129 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~a-l~~~~~~~~-~gd~vl~~~~----~y~~~~~~~~~~~~~~g~~v~~~~- 129 (393)
.+|...+|++.+++++|.+..+.+.+|..+ ..++..+++ +||++.+..+ .+...+......+...|+.++.++
T Consensus 72 gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~ 151 (467)
T TIGR02617 72 GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYT 151 (467)
T ss_pred cCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccc
Confidence 478899999999999999999989899766 466667777 6776664332 111111111233456677766542
Q ss_pred -----------CC---CHHHHHhhcCC----CCcEEEEecCCC-CcccccC---HHHHHHHHHhCCCcEEEEeCccCcc-
Q psy12791 130 -----------LR---KIENLIKYIKP----NTKMVWIENPTN-PLMTVFD---VKAISAVVKQHPDILLVLDNTFLTA- 186 (393)
Q Consensus 130 -----------~~---d~~~l~~~l~~----~~~~v~l~~p~n-ptG~~~~---~~~l~~l~~~~~~~~livDea~~~~- 186 (393)
.+ |++++++.+.+ +...+..+--+| -.|.++| ++++.++|++| |+.+++|.+-..-
T Consensus 152 ~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~-GIplhLDgARl~nN 230 (467)
T TIGR02617 152 KEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKY-DIPVVMDSARFAEN 230 (467)
T ss_pred hhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHc-CCcEEEEhHHHHHH
Confidence 11 78999999874 222333322223 3577777 67888899999 9999999866431
Q ss_pred c----------ccCCC-------CCcCcEEEEcccccccCCCCceEEEEEecCh---HHHHHHHHHHHh-----cCCCCC
Q psy12791 187 Y----------YQKSL-------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDD---SLQARLKFLQNS-----MGVVPS 241 (393)
Q Consensus 187 ~----------~~~~~-------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~---~~~~~~~~~~~~-----~~~~~~ 241 (393)
. ...++ ...+|.+..|++|.+ |.|- +|+++++++ ++.++++..... ..+..+
T Consensus 231 A~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKgl-gApv--Gg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGla 307 (467)
T TIGR02617 231 AYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDA-MVPM--GGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLE 307 (467)
T ss_pred hhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCC-CCcc--cceEEecchhHHHHHHHHHhhcccccCCcCcCchh
Confidence 1 11111 135799999999999 4552 778888877 555555433221 122334
Q ss_pred HHHHHHHHhccCC-H-HHHHHHHHHHHHHHHHHHhh
Q psy12791 242 PFDCWLVTRGLKT-L-PCRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 242 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~l~~ 275 (393)
.-+...+..+++. . ...........+++.+.|.+
T Consensus 308 grd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~ 343 (467)
T TIGR02617 308 GGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEE 343 (467)
T ss_pred HHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHh
Confidence 4443333334432 2 22334444556778888865
No 374
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.08 E-value=1.5e-08 Score=97.63 Aligned_cols=208 Identities=12% Similarity=0.071 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHhC-CCcEEEeccHHHHH-HHHH-HhcCCCC-eEEEc-CCCccchHHHHHHh-cccCCc------EEEee
Q psy12791 61 RRNLERCIASLEE-AKHGLCYSSGLGAV-TAVT-HLLSAGD-HIISG-DDVYGGTYRYFAQV-APKIGL------EVDFV 128 (393)
Q Consensus 61 ~~~lr~~la~~~~-~~~~i~~~~G~~al-~~~~-~~~~~gd-~vl~~-~~~y~~~~~~~~~~-~~~~g~------~v~~~ 128 (393)
..+|.+.|++... .+...+.+||++|+ .++. +..-.|+ +|+.. ...|++....+... ....|. .+..+
T Consensus 90 ~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~ 169 (431)
T PRK06209 90 ELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF 169 (431)
T ss_pred HHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc
Confidence 3467888888764 34577788999987 5443 1111343 44443 23333211111100 001111 13445
Q ss_pred CCCCHHHHHhhcC---CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-----CCCCCcCcEEE
Q psy12791 129 DLRKIENLIKYIK---PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ-----KSLPWGVDIVL 200 (393)
Q Consensus 129 ~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~-----~~~~~~~di~~ 200 (393)
+..|++++++.+. +++.+|+++......+..-.+++|.++|++| |+++|+||++..+... .......|+
T Consensus 170 ~~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~-g~lLI~DEv~tG~~~~~~g~~~~~gv~PDi-- 246 (431)
T PRK06209 170 RYNDIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHEN-GALFILDEMITGFRWHMRGAQKLYGIVPDL-- 246 (431)
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHc-CCEEEEEcccccCCcCcchhhHHhCCCcce--
Confidence 5668888888774 3466788776553211111289999999999 9999999998653221 011224566
Q ss_pred EcccccccCCCCceEEEEEecChHHHHH--HHHH---HHh-cCC--CCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHH
Q psy12791 201 YSLTKYMNGHSDVVMGATVTNDDSLQAR--LKFL---QNS-MGV--VPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVA 270 (393)
Q Consensus 201 ~S~sK~~~G~~G~r~G~~~~~~~~~~~~--~~~~---~~~-~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~ 270 (393)
.+++|.++ .|+.+|+++++ +++.+. +... ... .+. ..++..+..+.+.++.++ ...++..+..+.+.
T Consensus 247 ~t~gK~lg--gG~p~~av~~~-~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~ 323 (431)
T PRK06209 247 SCFGKALG--NGFAVSALAGK-REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLA 323 (431)
T ss_pred eeehhhhc--CCcccEEEEEH-HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 45789995 35669999987 777765 2110 100 122 234556555555544332 13444445555555
Q ss_pred HHHh
Q psy12791 271 KFLE 274 (393)
Q Consensus 271 ~~l~ 274 (393)
+.|+
T Consensus 324 ~~L~ 327 (431)
T PRK06209 324 AGVN 327 (431)
T ss_pred HHHH
Confidence 5554
No 375
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.02 E-value=3.4e-07 Score=90.63 Aligned_cols=171 Identities=16% Similarity=0.109 Sum_probs=116.0
Q ss_pred eEEEcCCCccchHHHHHHhcccCCc---EEEeeCCC-----CHHHHHhhcCC----C--CcEEEEecCCCCcccccCHHH
Q psy12791 99 HIISGDDVYGGTYRYFAQVAPKIGL---EVDFVDLR-----KIENLIKYIKP----N--TKMVWIENPTNPLMTVFDVKA 164 (393)
Q Consensus 99 ~vl~~~~~y~~~~~~~~~~~~~~g~---~v~~~~~~-----d~~~l~~~l~~----~--~~~v~l~~p~nptG~~~~~~~ 164 (393)
+++++.-.|.+ +.+++...|+ .++.+|.+ |++.|++.+.+ + +-+|+.+..+..+|.+=|+++
T Consensus 224 ~vl~s~~aHyS----~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~e 299 (608)
T TIGR03811 224 KWLVPQTKHYS----WLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDK 299 (608)
T ss_pred EEEECCCccHH----HHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHH
Confidence 46777766764 7788888898 58888875 78888877742 2 345666888999999999999
Q ss_pred HHHHH---HhCCCc--EEEEeCccCccc---ccC------CC------------------------------CCcCcEEE
Q psy12791 165 ISAVV---KQHPDI--LLVLDNTFLTAY---YQK------SL------------------------------PWGVDIVL 200 (393)
Q Consensus 165 l~~l~---~~~~~~--~livDea~~~~~---~~~------~~------------------------------~~~~di~~ 200 (393)
|.++| +++ |+ +++||.||+.+. +.. |. -..+|-++
T Consensus 300 I~~l~~~~~~~-gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSIt 378 (608)
T TIGR03811 300 IVALRNKLMKE-GIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVT 378 (608)
T ss_pred HHHHHHHHHHc-CCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEE
Confidence 99999 567 76 699999999743 100 00 02578999
Q ss_pred EcccccccCCCCceEEEEEecChHHHHHHHHHHHh-----------------cCCCCC--HHHHHHHHhcc----CCHHH
Q psy12791 201 YSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS-----------------MGVVPS--PFDCWLVTRGL----KTLPC 257 (393)
Q Consensus 201 ~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--~~~~~~~~~~~----~~~~~ 257 (393)
..+||++.-+- -.|.++.+++.+.+.+.....+ .+.-.. ....|+..+.+ +.+..
T Consensus 379 vDpHK~g~~Py--~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~ 456 (608)
T TIGR03811 379 IDPHKMGYIPY--SAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGK 456 (608)
T ss_pred eCcccccccCC--CeEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHH
Confidence 99999984233 4888888877766655321111 111111 23334444443 34666
Q ss_pred HHHHHHHHHHHHHHHHhhC
Q psy12791 258 RLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 258 ~~~~~~~~~~~l~~~l~~~ 276 (393)
.+++..+.++++.+.|+..
T Consensus 457 ~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 457 LIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 7788888889999999874
No 376
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.01 E-value=3.9e-09 Score=96.33 Aligned_cols=159 Identities=19% Similarity=0.221 Sum_probs=120.9
Q ss_pred HHHHHHHHHHhCCCc-EEEeccHHHH-H---HHHHHhc-CC----CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 62 RNLERCIASLEEAKH-GLCYSSGLGA-V---TAVTHLL-SA----GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 62 ~~lr~~la~~~~~~~-~i~~~~G~~a-l---~~~~~~~-~~----gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
.+|++.|.+..|.+. .+-..+|++. . .+|.+.- .. .+.+++|+-.|+. ....+...|.+|+.|+++
T Consensus 112 ~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGT----NPASAam~G~~VV~V~~~ 187 (496)
T COG1003 112 YELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGT----NPASAAMAGFKVVVVKCD 187 (496)
T ss_pred HHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCC----ChhhHhhcCceEEEEecC
Confidence 456777777778775 5667888874 4 4444432 22 3679999999985 455678899999999986
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCccccc-CHHHHHHHHHhCCCcEEEEeCccCcccc--cCCCCCcCcEEEEcc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVF-DVKAISAVVKQHPDILLVLDNTFLTAYY--QKSLPWGVDIVLYSL 203 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~livDea~~~~~~--~~~~~~~~di~~~S~ 203 (393)
|+++|++++.+++.++.+++||.- |..- ++.+|.++.+++ |..|..|.+-.-... ..|-+.|.|++-..+
T Consensus 188 ~~G~VDlddLk~k~~~~~AalMiTnPsT~-GvFE~~I~ei~~ivH~~-Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNL 265 (496)
T COG1003 188 ENGNVDLDDLRAKAEDNLAALMITNPSTL-GVFEEDIREICEIVHEA-GGQVYYDGANLNAIVGLARPGDMGFDVVHLNL 265 (496)
T ss_pred CCCCccHHHHHHHhccceeEEEeccCccc-ccchhhHHHHHHHHHHc-CCEEEecCcchhhhhccccccccccceEEeec
Confidence 899999999999999999999954 4433 599999999999 999999998765322 367778999999999
Q ss_pred ccccc-----CCCCceEEEEEecChHHHHHH
Q psy12791 204 TKYMN-----GHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 204 sK~~~-----G~~G~r~G~~~~~~~~~~~~~ 229 (393)
||.|+ |-|| .|=+..+ .++...+
T Consensus 266 HKTF~iPHGGGGPG--~GPvgVk-~~L~pfL 293 (496)
T COG1003 266 HKTFCIPHGGGGPG--AGPVGVK-AHLAPFL 293 (496)
T ss_pred ccccccCCCCCCCC--CCceehH-hhccccC
Confidence 99986 3445 6666665 5554433
No 377
>KOG1401|consensus
Probab=98.88 E-value=3e-07 Score=83.66 Aligned_cols=208 Identities=19% Similarity=0.194 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHhC---CCcEEEeccHHHHH-HHHH-Hh--cC---CCC--eEEEcCCCccchHHHHHHhc--ccCCc---
Q psy12791 61 RRNLERCIASLEE---AKHGLCYSSGLGAV-TAVT-HL--LS---AGD--HIISGDDVYGGTYRYFAQVA--PKIGL--- 123 (393)
Q Consensus 61 ~~~lr~~la~~~~---~~~~i~~~~G~~al-~~~~-~~--~~---~gd--~vl~~~~~y~~~~~~~~~~~--~~~g~--- 123 (393)
.-+|.+.|.+..+ .+...+..||++|. .++. +. .. +-+ .++.-..+|++...-.-..+ ..++.
T Consensus 100 av~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~ 179 (433)
T KOG1401|consen 100 AVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFD 179 (433)
T ss_pred HHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCC
Confidence 5567777777773 34577789999996 4442 21 11 112 37777777765321111111 12222
Q ss_pred ----EEEeeCCCCHHHHHhhcCCC---CcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc----
Q psy12791 124 ----EVDFVDLRKIENLIKYIKPN---TKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY---- 188 (393)
Q Consensus 124 ----~v~~~~~~d~~~l~~~l~~~---~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~---- 188 (393)
.++..+.+|..++++.++.+ ..+|+++..+...|..+. +..|.++|+++ ++++|.||++..+.-
T Consensus 180 p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~-~vl~I~DEV~tG~gR~g~~ 258 (433)
T KOG1401|consen 180 PIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDN-GVLLIFDEVQTGLGRLGYG 258 (433)
T ss_pred CCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhc-CceEEeehhhhCccccchH
Confidence 23444455888888888754 589999999988887775 77899999999 999999999986321
Q ss_pred --cCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH---hcCCCCCHHHHHHHHhccCCHH--HHHHH
Q psy12791 189 --QKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN---SMGVVPSPFDCWLVTRGLKTLP--CRLKE 261 (393)
Q Consensus 189 --~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 261 (393)
+.-+....||. ++.|.++ .|+.+|..+++ +.+.+.+..-.. ...-..+++.+..+...++.+. ...++
T Consensus 259 ~a~e~~~~~PDI~--t~aK~L~--gGlPigA~~v~-~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~ 333 (433)
T KOG1401|consen 259 WAQEYFGVTPDIT--TVAKPLG--GGLPIGATGVR-DKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKN 333 (433)
T ss_pred HHHHHhCcCCcce--eehhhcc--CCceeEEEeeh-HHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHH
Confidence 11122345766 5779995 45789999998 788887753222 1122235666655555544322 23344
Q ss_pred HHHHHHHHHHHHh
Q psy12791 262 HERGSIEVAKFLE 274 (393)
Q Consensus 262 ~~~~~~~l~~~l~ 274 (393)
..+....+++.|.
T Consensus 334 vs~~~k~L~~~l~ 346 (433)
T KOG1401|consen 334 VSKIGKELRKLLD 346 (433)
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444443
No 378
>KOG1411|consensus
Probab=98.86 E-value=3.9e-08 Score=87.17 Aligned_cols=247 Identities=18% Similarity=0.195 Sum_probs=145.9
Q ss_pred chHHHHHHHHHHH-hCCC------cEEE---eccHHHHH---HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEE
Q psy12791 59 PTRRNLERCIASL-EEAK------HGLC---YSSGLGAV---TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEV 125 (393)
Q Consensus 59 ~~~~~lr~~la~~-~~~~------~~i~---~~~G~~al---~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v 125 (393)
.+..++.+.-+++ +|.. ..++ .-||+-++ ..+++..-++..|.+|+|+++. ..+..+..|+.+
T Consensus 95 ~Gl~eF~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgN----h~~if~~ag~~~ 170 (427)
T KOG1411|consen 95 TGLAEFNKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGN----HKNIFKDAGLPV 170 (427)
T ss_pred cchHHHHHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccc----cCccccccCcce
Confidence 3455566666664 4431 2222 24555554 3444545568899999999985 567788889888
Q ss_pred EeeCCC-------CHHHHHhhcCCC--CcEEEE-ecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccCCC
Q psy12791 126 DFVDLR-------KIENLIKYIKPN--TKMVWI-ENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQKSL 192 (393)
Q Consensus 126 ~~~~~~-------d~~~l~~~l~~~--~~~v~l-~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~~~ 192 (393)
..+..- |.+.+.+.+.+. -..|++ ...|||||.-.. +++|.++.++. +.+-+.|.+|..+......
T Consensus 171 ~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG~~d 249 (427)
T KOG1411|consen 171 KFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASGDLD 249 (427)
T ss_pred eeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccCCch
Confidence 666542 555444444332 233444 456999999886 66778888888 8999999999986543221
Q ss_pred C----------Cc-CcEEEEcccccccCCCCceEEEE--EecChHHHHHHH----HHHHhcCCCCCHHHHHHHHhccCCH
Q psy12791 193 P----------WG-VDIVLYSLTKYMNGHSDVVMGAT--VTNDDSLQARLK----FLQNSMGVVPSPFDCWLVTRGLKTL 255 (393)
Q Consensus 193 ~----------~~-~di~~~S~sK~~~G~~G~r~G~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (393)
. .| .-+++.|+.|.+ |+-|-|+|.+ +|.+++...++. .+...+.+++....+.++...+..-
T Consensus 250 ~DA~avR~F~~~g~~~~laQSyAKNM-GLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~ 328 (427)
T KOG1411|consen 250 KDAQAVRLFVEDGHEILLAQSYAKNM-GLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDP 328 (427)
T ss_pred hhHHHHHHHHHcCCceEeehhhhhhc-chhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCCh
Confidence 1 12 238899999999 7999999985 667666665553 3334455555444444554444432
Q ss_pred H----------HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhc
Q psy12791 256 P----------CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESL 325 (393)
Q Consensus 256 ~----------~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (393)
. ...+++...++.+.+.|+. ++.+...+| +. . .-||+.|+-- ++++++.+.++.
T Consensus 329 ~l~~~W~~evk~MadRi~~mR~~L~d~L~~---------~gs~~~W~h-I~----~-QIGMF~fTgl-~peQv~~l~ke~ 392 (427)
T KOG1411|consen 329 DLKNQWLGEVKGMADRIISMRQQLFDALEK---------EGSPGNWSH-IT----K-QIGMFCFTGL-NPEQVDWLTKEY 392 (427)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHhHHhhc---------CCCCccHHH-HH----H-hhheeeecCC-CHHHHHHHHhhh
Confidence 2 1122222223333333321 111111111 11 1 1378888752 899999998876
Q ss_pred Cc
Q psy12791 326 LI 327 (393)
Q Consensus 326 ~~ 327 (393)
.+
T Consensus 393 ~i 394 (427)
T KOG1411|consen 393 HI 394 (427)
T ss_pred ee
Confidence 65
No 379
>KOG2467|consensus
Probab=98.67 E-value=6e-06 Score=74.16 Aligned_cols=235 Identities=14% Similarity=0.111 Sum_probs=137.3
Q ss_pred HHHhCCC-c----EEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchH-HHHHHhcccCCcEEEee---CC--C-----
Q psy12791 69 ASLEEAK-H----GLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTY-RYFAQVAPKIGLEVDFV---DL--R----- 131 (393)
Q Consensus 69 a~~~~~~-~----~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~-~~~~~~~~~~g~~v~~~---~~--~----- 131 (393)
-+.++.+ + .|-.-||+.|. .+..++++|+++|.--+.-.++.. .-|..-.+.-.+.-+++ |. +
T Consensus 96 LeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~ 175 (477)
T KOG2467|consen 96 LEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGY 175 (477)
T ss_pred HHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCc
Confidence 3345654 1 67778999995 777889999999874433222110 00111112222222222 11 1
Q ss_pred -CHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccc-----ccCCCCCcCcEEEEccc
Q psy12791 132 -KIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAY-----YQKSLPWGVDIVLYSLT 204 (393)
Q Consensus 132 -d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~-----~~~~~~~~~di~~~S~s 204 (393)
|.+.|++... =++++++.-....+ ..+|..++.++|.+. |+++++|-++..+. ..+|+++ +|||+.+.|
T Consensus 176 IDYD~Le~~A~~frPk~iiaG~SaY~--R~~DYaR~R~Iad~~-gA~Lm~DMAHISgLVAA~vipsPFey-~DiVTTTTH 251 (477)
T KOG2467|consen 176 IDYDKLEKTATLFRPKLIIAGTSAYS--RLIDYARFRKIADKV-GAYLMADMAHISGLVAAGVIPSPFEY-CDIVTTTTH 251 (477)
T ss_pred eehHHHHHHHHhcCCcEEEeccccch--hhccHHHHHHHHHhc-CceeehhhhhHHHHHhcccCCCcccc-cceeecccc
Confidence 6777776543 36788876443333 567899999999999 99999999998643 2345554 899999999
Q ss_pred ccccCCCCceEEEEEecC--------------hHHHHHHHHHHH--hcCCCCCHHHH--HHHHhcc--CCHHHHHHHHHH
Q psy12791 205 KYMNGHSDVVMGATVTND--------------DSLQARLKFLQN--SMGVVPSPFDC--WLVTRGL--KTLPCRLKEHER 264 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~--------------~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~ 264 (393)
|.+.|+ |+|.+..+. -++.++|+...- ..|+..+...+ +.+++.. ..+....++..+
T Consensus 252 KsLRGP---Rg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~ 328 (477)
T KOG2467|consen 252 KSLRGP---RGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLK 328 (477)
T ss_pred ccccCC---cceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence 998766 677777542 034444442211 11222221111 2223332 235556777789
Q ss_pred HHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC---CHHHHHHHHHhcCc
Q psy12791 265 GSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG---GAEETRIFLESLLI 327 (393)
Q Consensus 265 ~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~ 327 (393)
|+..+.+.|.+...- +. .+-. -..++-+.+++ +-..++++++...+
T Consensus 329 Nakala~~l~~~Gy~--lv-tgGT--------------DnHlvLvDLr~~G~dGarvE~vle~~~I 377 (477)
T KOG2467|consen 329 NAKALASALISRGYK--LV-TGGT--------------DNHLVLVDLRPKGVDGARVEKVLELCHI 377 (477)
T ss_pred HHHHHHHHHHHcCce--Ee-cCCc--------------cceEEEEeccccCCchHHHHHHHHHhhh
Confidence 999999988765431 11 1100 02455555542 55788888887765
No 380
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.66 E-value=5.8e-06 Score=84.68 Aligned_cols=156 Identities=11% Similarity=0.119 Sum_probs=106.5
Q ss_pred HHHHHHHHHHhCCC--cEEEeccHHHH---HHHHHHhcC-CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHH
Q psy12791 62 RNLERCIASLEEAK--HGLCYSSGLGA---VTAVTHLLS-AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIEN 135 (393)
Q Consensus 62 ~~lr~~la~~~~~~--~~i~~~~G~~a---l~~~~~~~~-~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~ 135 (393)
-+++..++++.|.+ ++-+.-.++.+ +.+.....+ +..++++++-.|+.+....+..++..|++++. ++
T Consensus 127 ~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~~ 200 (954)
T PRK12566 127 LNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------DA 200 (954)
T ss_pred HHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------cc
Confidence 35677889999987 43444333332 222222222 24689999999998777777788889999886 23
Q ss_pred HHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeC-ccCcccccCCCCCcCcEEEEcccc-----cccC
Q psy12791 136 LIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDN-TFLTAYYQKSLPWGVDIVLYSLTK-----YMNG 209 (393)
Q Consensus 136 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDe-a~~~~~~~~~~~~~~di~~~S~sK-----~~~G 209 (393)
+++.+.+++..|++.+|| -.|.+.++++|.+++|+. |+++++-. --+......|-++|+||++++..- .| |
T Consensus 201 ~~~~~~~~~~~v~vq~P~-~~G~i~d~~~i~~~~h~~-gal~~~~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~-G 277 (954)
T PRK12566 201 VDNLAAHAVFGALLQYPD-THGEIRDLRPLIDQLHGQ-QALACVAADLLSLLVLTPPGELGADVVLGSTQRFGVPMGY-G 277 (954)
T ss_pred hhhcCCCCEEEEEEECCC-CceEEccHHHHHHHHHHc-CCEEEEEeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCC-C
Confidence 344556678899999998 569999999999999999 88755322 111233456777899999986543 34 3
Q ss_pred CCCceEEEEEecChHHHHHH
Q psy12791 210 HSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 210 ~~G~r~G~~~~~~~~~~~~~ 229 (393)
-|+ .||+.++ +++..++
T Consensus 278 GP~--ag~~a~~-~~~~R~~ 294 (954)
T PRK12566 278 GPH--AAYFACR-DDYKRAM 294 (954)
T ss_pred CCC--eeeeeeh-HHHHhhC
Confidence 344 9999998 5665554
No 381
>KOG1383|consensus
Probab=98.65 E-value=5.2e-07 Score=83.44 Aligned_cols=174 Identities=18% Similarity=0.207 Sum_probs=123.9
Q ss_pred EEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHh-C
Q psy12791 100 IISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQ-H 172 (393)
Q Consensus 100 vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~-~ 172 (393)
++++...+. .+...++.+++++..+|++ |+..+.+.++++|..++...|+.|+|.+-|+++|.++..+ +
T Consensus 173 iv~~~~v~~----a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w 248 (491)
T KOG1383|consen 173 IVTPQNVHA----AFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIW 248 (491)
T ss_pred ccchHHHHH----HHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHh
Confidence 455544443 5788888999999999886 8999999999999999999999999999999999999999 9
Q ss_pred CCcEEEEeCccCccccc----C--CCCC---cCcEEEEcccccccCCCCceEEEEEecChHHHH-HHHHHHHhc------
Q psy12791 173 PDILLVLDNTFLTAYYQ----K--SLPW---GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQA-RLKFLQNSM------ 236 (393)
Q Consensus 173 ~~~~livDea~~~~~~~----~--~~~~---~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~-~~~~~~~~~------ 236 (393)
++++.+|.+-+.|... . ++++ +..-+..+.||+---++| .||++-+++++.. .+.....+.
T Consensus 249 -~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G--~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s 325 (491)
T KOG1383|consen 249 -DIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAG--SSWVLYRNKELLPHQLFFHTDWLGGIYAS 325 (491)
T ss_pred -CCceeecccCccccccccccCccccccCCCCceeEeeccceeeeeecC--cEEEEEcccccccceEEEeccccCccccC
Confidence 9999999998876642 1 1222 334566778998556888 8998877654432 221111111
Q ss_pred ----CCCCC--HHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHhhCCCcc
Q psy12791 237 ----GVVPS--PFDCWLV--TRGLKTLPCRLKEHERGSIEVAKFLESHPCVK 280 (393)
Q Consensus 237 ----~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 280 (393)
++-++ ...+|+. ..+.+.+...+++..++++.+.+.++..+.+.
T Consensus 326 ~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~ 377 (491)
T KOG1383|consen 326 PTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIK 377 (491)
T ss_pred cccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccce
Confidence 11111 1223333 33445677788888999999999998766554
No 382
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.64 E-value=5.7e-06 Score=74.79 Aligned_cols=273 Identities=14% Similarity=0.080 Sum_probs=159.9
Q ss_pred hHHHHHHHHHHHhCCCc---EEEeccHHHH-H-HHHHHhcCCCC--eEEEcCCCccchHHHHHHhcccCCcEEEeeC---
Q psy12791 60 TRRNLERCIASLEEAKH---GLCYSSGLGA-V-TAVTHLLSAGD--HIISGDDVYGGTYRYFAQVAPKIGLEVDFVD--- 129 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~~---~i~~~~G~~a-l-~~~~~~~~~gd--~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~--- 129 (393)
...+.++.+.++++.|+ .+++..|.++ . .+.+.++..+. .|..-..+-.+ +. -++..+..+....
T Consensus 51 v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a----~~-eA~~~~~~~~~~~~~~ 125 (365)
T COG1932 51 VLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEFA----IK-EAKKVGKQPKLIDARI 125 (365)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEeeeehhHhH----HH-HHHHhcccccccccce
Confidence 34567778888999983 5566666665 6 55667776543 24443322221 22 2333332111111
Q ss_pred ----CC---CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC-CCcEEEEeCccCcccccCCCCC-cCcEEE
Q psy12791 130 ----LR---KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH-PDILLVLDNTFLTAYYQKSLPW-GVDIVL 200 (393)
Q Consensus 130 ----~~---d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~livDea~~~~~~~~~~~~-~~di~~ 200 (393)
.. +++.+. +.++...|.+|+-...+|+-++- .... ++.++|+|.+...+. .+++. ..|++.
T Consensus 126 ~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~v~~------~p~~~~~~~~v~D~SS~ils--r~iDvsk~dviy 195 (365)
T COG1932 126 EEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVEVPE------LPDIGSDGLLVADASSAILS--RPIDVSKYDVIY 195 (365)
T ss_pred eccCccCCCChhhcc--cCCCccEEEEecCCcccceEccC------CCCCCCCceEEEecccHHhc--CCCChhHcceEE
Confidence 11 333332 33334558888777788887761 1122 137899999876443 45553 568999
Q ss_pred EcccccccCCCCceEEEEEecChHHHHHHHHH--H-----------HhcCCCCCHHHHHHHHhcc------CCHHHHHHH
Q psy12791 201 YSLTKYMNGHSDVVMGATVTNDDSLQARLKFL--Q-----------NSMGVVPSPFDCWLVTRGL------KTLPCRLKE 261 (393)
Q Consensus 201 ~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~--~-----------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 261 (393)
.+..|.+ |+.| ++.++.+ ++++++++.. . ..+.++++.+..++....+ -.++...++
T Consensus 196 agaQKnl-GpaG--ltvvIvr-~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~r 271 (365)
T COG1932 196 AGAQKNL-GPAG--LTVVIVR-PDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEAR 271 (365)
T ss_pred Eehhhcc-Cccc--eEEEEEc-HHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 9999999 7999 8999988 8888877542 1 1123334333333332222 235556666
Q ss_pred HHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccc
Q psy12791 262 HERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLA 341 (393)
Q Consensus 262 ~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~ 341 (393)
-.++++.+.+++...+.......+. .+. .--+.|.+ .+.+....|+..+...+...--|..
T Consensus 272 n~~ka~~LY~~id~s~fy~~~v~~~-------------~RS-~mnV~f~~-~~~~ld~~fv~eae~~gl~~lkGhr---- 332 (365)
T COG1932 272 NQAKAQLLYDWIDKSDFYRNLVAKA-------------NRS-RMNVTFTL-VDAELDKGFVAEAEAAGLIYLKGHR---- 332 (365)
T ss_pred HHHHHHHHHHHHHhCCccccccchh-------------hcc-ceeEEEEc-CcHHHHHHHHHHHHHcCCceecccc----
Confidence 7788889999998765432221111 011 12267777 4677788888887765544333310
Q ss_pred cCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 342 DLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+-+|+|+.---.-+.++.|...++...
T Consensus 333 ---------------------~vgGmRasiynA~~~e~veaL~~fm~~f~ 361 (365)
T COG1932 333 ---------------------SVGGLRASIYNAVPLEDVEALTDFMDWFE 361 (365)
T ss_pred ---------------------CCCceeeeeecCCCHHHHHHHHHHHHHHH
Confidence 13459999987777777888888777554
No 383
>KOG1412|consensus
Probab=98.55 E-value=9.8e-06 Score=71.30 Aligned_cols=246 Identities=17% Similarity=0.220 Sum_probs=143.0
Q ss_pred chHHHHHHHHHHH-hCCC------c---EEEeccHHHHH-HH--HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc-E
Q psy12791 59 PTRRNLERCIASL-EEAK------H---GLCYSSGLGAV-TA--VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL-E 124 (393)
Q Consensus 59 ~~~~~lr~~la~~-~~~~------~---~i~~~~G~~al-~~--~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~-~ 124 (393)
-+...++.+.+++ +|.+ + .+-.-||+-|+ .. +++-.-+...|-+++|++.. ...+++..|. +
T Consensus 74 ~Gl~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~n----H~~if~~aGf~t 149 (410)
T KOG1412|consen 74 LGLPTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWEN----HHAIFEKAGFTT 149 (410)
T ss_pred cCchhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhH----HHHHHHHcCCce
Confidence 3556677777775 4432 2 34445677775 22 22222235579999999985 4455667783 3
Q ss_pred EEee---CCC----CHHHHHhhcCCC--CcEEEEec-CCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccCC
Q psy12791 125 VDFV---DLR----KIENLIKYIKPN--TKMVWIEN-PTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQKS 191 (393)
Q Consensus 125 v~~~---~~~----d~~~l~~~l~~~--~~~v~l~~-p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~~ 191 (393)
+..+ +.+ |++.+...++.. -.++++.. .+||||.-.. +.+|++..++. +...+.|-+|.++....+
T Consensus 150 v~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k-~lf~fFDiAYQGfASGD~ 228 (410)
T KOG1412|consen 150 VATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSK-NLFPFFDIAYQGFASGDL 228 (410)
T ss_pred eeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhc-CceeeeehhhcccccCCc
Confidence 4333 332 777777776543 23444443 3999999887 55677777777 889999999987654332
Q ss_pred CC----------CcC-cEEEEcccccccCCCCceEEEE--EecChHHHHHHH----HHHHhcCCCCCHHHHHHHHhccCC
Q psy12791 192 LP----------WGV-DIVLYSLTKYMNGHSDVVMGAT--VTNDDSLQARLK----FLQNSMGVVPSPFDCWLVTRGLKT 254 (393)
Q Consensus 192 ~~----------~~~-di~~~S~sK~~~G~~G~r~G~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 254 (393)
.. .+. .+++.||+|.+ |+-+-|+|-+ +.+++..+..+. .........+....+-++.+.+.+
T Consensus 229 ~~DawAiR~fV~~g~e~fv~QSFaKNf-GlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~t 307 (410)
T KOG1412|consen 229 DADAWAIRYFVEQGFELFVCQSFAKNF-GLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLST 307 (410)
T ss_pred cccHHHHHHHHhcCCeEEEEhhhhhhc-ccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcC
Confidence 11 122 48999999999 7999999974 445565555443 333333344445555556555544
Q ss_pred HHHHHHHH-----------HHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHH
Q psy12791 255 LPCRLKEH-----------ERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLE 323 (393)
Q Consensus 255 ~~~~~~~~-----------~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
-+ ++++. .+.+..|.+.|.. ...|+ ..+| . -..-||++++-- ++.+++.+.+
T Consensus 308 P~-lre~W~~sik~MssRI~~MR~aLrd~L~a------L~TPG---tWDH--I----~~QiGMFSyTGL-tp~qV~~li~ 370 (410)
T KOG1412|consen 308 PE-LREQWIQSIKTMSSRIKKMRTALRDHLVA------LKTPG---TWDH--I----TQQIGMFSYTGL-TPAQVDHLIE 370 (410)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCCCC---cHHH--H----HhhccceeecCC-CHHHHHHHHH
Confidence 22 22222 2222333333322 12222 1111 1 112478888742 7889998888
Q ss_pred hcCc
Q psy12791 324 SLLI 327 (393)
Q Consensus 324 ~l~~ 327 (393)
.-++
T Consensus 371 ~h~v 374 (410)
T KOG1412|consen 371 NHKV 374 (410)
T ss_pred hceE
Confidence 7665
No 384
>KOG0628|consensus
Probab=98.54 E-value=7.2e-06 Score=75.89 Aligned_cols=246 Identities=14% Similarity=0.206 Sum_probs=134.0
Q ss_pred CCchHHHHHHHH----HHHhCCC-----------cEEEeccHHHH-HHHHHHh-------cCCC-----------Ce-EE
Q psy12791 57 NNPTRRNLERCI----ASLEEAK-----------HGLCYSSGLGA-VTAVTHL-------LSAG-----------DH-II 101 (393)
Q Consensus 57 ~~~~~~~lr~~l----a~~~~~~-----------~~i~~~~G~~a-l~~~~~~-------~~~g-----------d~-vl 101 (393)
..|..++|+..+ +++++.| -.++.++.+++ +.++++. ++.+ +- +-
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 568889998654 4444432 36777788777 4333221 2222 22 34
Q ss_pred EcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCC-----CcEEEEecCCCCccc--ccCHHHHHHHH
Q psy12791 102 SGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPN-----TKMVWIENPTNPLMT--VFDVKAISAVV 169 (393)
Q Consensus 102 ~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~-----~~~v~l~~p~nptG~--~~~~~~l~~l~ 169 (393)
.++.+|.+ .++.+...|++++.++.+ +.+.|++++.++ +-.+++.+.. .||. .-++.+|..+|
T Consensus 187 ~SDqahss----veka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G-TT~~ca~D~l~elg~Vc 261 (511)
T KOG0628|consen 187 CSDQAHSS----VEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLG-TTSSCAFDELEELGPVC 261 (511)
T ss_pred ecCcccch----HHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeec-CccccccccHHHhcchh
Confidence 56677774 777888889998888876 567777777643 2233333332 2232 23599999999
Q ss_pred HhCCCcEEEEeCccCccccc----CCCCC---cCcEEEEcccccccCCCCceEEEEEecC-----------hHHHH-HH-
Q psy12791 170 KQHPDILLVLDNTFLTAYYQ----KSLPW---GVDIVLYSLTKYMNGHSDVVMGATVTND-----------DSLQA-RL- 229 (393)
Q Consensus 170 ~~~~~~~livDea~~~~~~~----~~~~~---~~di~~~S~sK~~~G~~G~r~G~~~~~~-----------~~~~~-~~- 229 (393)
+++ |+||.||.+|++..+. ..+.. .+|-+-...|||+. .-+-...+-.++ +...+ ..
T Consensus 262 ~~~-glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~--vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~ 338 (511)
T KOG0628|consen 262 REE-GLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLL--VNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQ 338 (511)
T ss_pred hhc-CEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeE--EeeeeecceeecCceeeeeeecChHhhcchhh
Confidence 999 9999999999964321 11111 25677777788763 111111111111 11111 00
Q ss_pred ------HHHHHhcCCCCCHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcC
Q psy12791 230 ------KFLQNSMGVVPSPFDCWLVTRG--LKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWS 301 (393)
Q Consensus 230 ------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~ 301 (393)
+-++...+----.+-.++..+. .+.++..+.++.+.++.+...+.+-+..+-+. .
T Consensus 339 ~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~-----------------~ 401 (511)
T KOG0628|consen 339 GSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVN-----------------K 401 (511)
T ss_pred ccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeec-----------------c
Confidence 0001111111112223333332 24455555555555555555444333322111 1
Q ss_pred CCcceEEEEEcCCHHHHHHHHHhcCc
Q psy12791 302 GTSGMLSFYVNGGAEETRIFLESLLI 327 (393)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~l~~ 327 (393)
..-+++.|+++++.+.++++++++..
T Consensus 402 ~~lgLvcFRlk~~N~~ne~Ll~~in~ 427 (511)
T KOG0628|consen 402 RILGLVCFRLKGDNEINEALLNRLNS 427 (511)
T ss_pred cccceeEEeecCCcHHHHHHHHHHHh
Confidence 12478999998888999999999864
No 385
>KOG0629|consensus
Probab=98.38 E-value=7.8e-05 Score=68.53 Aligned_cols=208 Identities=15% Similarity=0.153 Sum_probs=136.5
Q ss_pred HHHHhCCC---cEEEeccHHHH-HHHHH-Hh--cCC-----C-----CeE-EEcCCCccchHHHHHHhcccCC---cEEE
Q psy12791 68 IASLEEAK---HGLCYSSGLGA-VTAVT-HL--LSA-----G-----DHI-ISGDDVYGGTYRYFAQVAPKIG---LEVD 126 (393)
Q Consensus 68 la~~~~~~---~~i~~~~G~~a-l~~~~-~~--~~~-----g-----d~v-l~~~~~y~~~~~~~~~~~~~~g---~~v~ 126 (393)
+-+..|.+ +.|+.++|+-+ +.++. +- .-| | +-| .+++-+|.+ +.+++..+| -.++
T Consensus 150 m~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYS----i~kaAa~lg~gtd~c~ 225 (510)
T KOG0629|consen 150 MREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYS----IKKAAAFLGLGTDHCI 225 (510)
T ss_pred HHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhh----HHHHHHHhccCCceeE
Confidence 33444543 78999888887 54332 21 111 2 223 455555554 567777777 4677
Q ss_pred eeCCC-----CHHHHHhhcCC---C---CcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC---
Q psy12791 127 FVDLR-----KIENLIKYIKP---N---TKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL--- 192 (393)
Q Consensus 127 ~~~~~-----d~~~l~~~l~~---~---~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~--- 192 (393)
.|+.+ ++++|++.+.+ + +-.|-.+......|..-|++.|+++|++| +.|++||.|.+.+..-+..
T Consensus 226 ~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~-~lWmHvDAAwGGglLmS~k~R~ 304 (510)
T KOG0629|consen 226 KVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKH-KLWMHVDAAWGGGLLMSRKHRH 304 (510)
T ss_pred EecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhc-CEEEEeecccccccccChhhHh
Confidence 77775 68888887743 2 34455566677888888999999999999 9999999999985542211
Q ss_pred ----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH---------------------hcCCCCCHHHHHH
Q psy12791 193 ----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN---------------------SMGVVPSPFDCWL 247 (393)
Q Consensus 193 ----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~ 247 (393)
...++-+.-+.||+++ +.+..+.+..+...+.++++.... ..|-....+-.|+
T Consensus 305 kl~Giera~SvtwnpHK~~g--aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWl 382 (510)
T KOG0629|consen 305 KLTGIERANSVTWNPHKLMG--APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWL 382 (510)
T ss_pred hccCccccCceeecHHHhhc--CcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHH
Confidence 1246789999999994 335677777665556666643321 1233334444444
Q ss_pred HH--hccCCHHHHHHHHHHHHHHHHHHHhhCCCcceE
Q psy12791 248 VT--RGLKTLPCRLKEHERGSIEVAKFLESHPCVKGV 282 (393)
Q Consensus 248 ~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v 282 (393)
.. ++.+.++.++++..+.++++.+.+++.+....+
T Consensus 383 mwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l 419 (510)
T KOG0629|consen 383 MWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEML 419 (510)
T ss_pred HHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceeh
Confidence 44 445678888999999999999999887664433
No 386
>KOG3846|consensus
Probab=98.32 E-value=3.7e-05 Score=67.60 Aligned_cols=165 Identities=17% Similarity=0.245 Sum_probs=115.3
Q ss_pred HHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCC---CeEEEcCCCccchHHHHHHhcccCCcEEE----eeCCC--
Q psy12791 64 LERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAG---DHIISGDDVYGGTYRYFAQVAPKIGLEVD----FVDLR-- 131 (393)
Q Consensus 64 lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~g---d~vl~~~~~y~~~~~~~~~~~~~~g~~v~----~~~~~-- 131 (393)
+-..++...|+. +.|.+.+.-+. + .++..+.+|- -+|+...-.|++-+..+...++..|+.+. .+...
T Consensus 116 il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREG 195 (465)
T KOG3846|consen 116 ILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREG 195 (465)
T ss_pred hhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEeccccc
Confidence 445566666665 57777777777 6 6667777764 46899999999988888899999998753 23222
Q ss_pred ----CHHHHHhhcCC---CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC---CCcCcEEEE
Q psy12791 132 ----KIENLIKYIKP---NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL---PWGVDIVLY 201 (393)
Q Consensus 132 ----d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~---~~~~di~~~ 201 (393)
..+++.+.+.. ...+|++...+.-||..+++.+|. .|.+.+|+++=.|-+++.+- .|+ ++|.|+.+.
T Consensus 196 EetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT-~Agq~kgc~VGfDLAHAvgN--VpL~LHdWgVDFACW 272 (465)
T KOG3846|consen 196 EETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAIT-FAGQFKGCLVGFDLAHAVGN--VPLQLHDWGVDFACW 272 (465)
T ss_pred ccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhh-hcccCCCcEechhhhhhhcC--CceEEeecCCceEEE
Confidence 34555555543 367888899999999999999998 45544599999999998542 343 368999999
Q ss_pred cccccccCCCCceEEEEEecChHHHHHHHHH
Q psy12791 202 SLTKYMNGHSDVVMGATVTNDDSLQARLKFL 232 (393)
Q Consensus 202 S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~ 232 (393)
...|+++.-+|-.+|..+-. +...+...++
T Consensus 273 CSYKYlnaGaGgIgGlFvHe-kh~~~~~prl 302 (465)
T KOG3846|consen 273 CSYKYLNAGAGGIGGLFVHE-KHTKESLPRL 302 (465)
T ss_pred eeecccccCCCccceeeeeh-hhhcchhhHH
Confidence 99999983344445555532 4343333333
No 387
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.25 E-value=7e-05 Score=69.13 Aligned_cols=154 Identities=16% Similarity=0.124 Sum_probs=93.9
Q ss_pred HhCCC---cEEEe--ccHHHHHHHHHHh--cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--------CHHH
Q psy12791 71 LEEAK---HGLCY--SSGLGAVTAVTHL--LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--------KIEN 135 (393)
Q Consensus 71 ~~~~~---~~i~~--~~G~~al~~~~~~--~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--------d~~~ 135 (393)
..|.. .++++ .+|++-..++.++ -..++.|+.+...+-+. + .+....|.+++.++.. |.+.
T Consensus 68 ~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc---~-kai~~AGl~~~vV~~~~~~d~l~td~~~ 143 (389)
T PF05889_consen 68 LAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSC---F-KAIERAGLEPVVVENVLEGDELITDLEA 143 (389)
T ss_dssp HTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHH---H-HHHHHTT-EEEEE-EEEETTEEEEHHHH
T ss_pred HcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccch---H-HHHHhcCCeEEEeeccCCCCeeeccHHH
Confidence 45655 34554 3343321333333 24578999998887753 3 3356679998888752 5666
Q ss_pred HHhhcC---CCCcEEEEecCCCCcccccC-HHHHHHHHHhCCCcEEEEeCccCcccc------cCCCCC-cCcEEEEccc
Q psy12791 136 LIKYIK---PNTKMVWIENPTNPLMTVFD-VKAISAVVKQHPDILLVLDNTFLTAYY------QKSLPW-GVDIVLYSLT 204 (393)
Q Consensus 136 l~~~l~---~~~~~v~l~~p~nptG~~~~-~~~l~~l~~~~~~~~livDea~~~~~~------~~~~~~-~~di~~~S~s 204 (393)
+++.++ ++..+.++++++---+...| +++|.++|+++ |++.++-+||+.=.. +..... -.|+++.|.-
T Consensus 144 ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~-~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~d 222 (389)
T PF05889_consen 144 IEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEY-DIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTD 222 (389)
T ss_dssp HHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHH-T--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHH
T ss_pred HHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHc-CCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecC
Confidence 666554 35678888888877788888 99999999999 999999999985100 011112 2589999999
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHH
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKF 231 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~ 231 (393)
|.|-=+.| .+.+++.++..+..+..
T Consensus 223 kNF~VPvG--gai~As~~~~~i~~vs~ 247 (389)
T PF05889_consen 223 KNFMVPVG--GAIMASFDPSGILAVSK 247 (389)
T ss_dssp HHHCEESS--HEEEEESSHHHHHHHHH
T ss_pred CCEEecCC--CcEEEecCHHHHHHHHH
Confidence 98853333 55666666777777654
No 388
>KOG1403|consensus
Probab=98.19 E-value=1.9e-05 Score=69.12 Aligned_cols=204 Identities=14% Similarity=0.126 Sum_probs=116.9
Q ss_pred CcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccc-----c--cCCCCCcCcEEEEcccccccCCCC
Q psy12791 144 TKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAY-----Y--QKSLPWGVDIVLYSLTKYMNGHSD 212 (393)
Q Consensus 144 ~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~-----~--~~~~~~~~di~~~S~sK~~~G~~G 212 (393)
..+.+-++-++=.|.++| .+++.+..+.+ |.+.|.||++..+- + .....+-.||+ ++.|-++ .|
T Consensus 210 vAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~a-GGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIV--tmgKpmG--NG 284 (452)
T KOG1403|consen 210 VAAFIAESLQSCGGQIIPPAGYFQAVADAVRSA-GGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIV--TMGKPMG--NG 284 (452)
T ss_pred HHHHHHHHHHhcCCcccCchhHHHHHHHHHhcC-CCeEEeehhhhcccccchhhhhhhhhccccchh--eecccCC--CC
Confidence 345555777777788887 77888889999 99999999998631 1 11112335777 4779884 45
Q ss_pred ceEEEEEecChHHHHHHHHHH--HhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCC
Q psy12791 213 VVMGATVTNDDSLQARLKFLQ--NSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSH 290 (393)
Q Consensus 213 ~r~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~ 290 (393)
..++.+++. +++.+.+.... .+..-..+|..++..+.-++.. .-+.+.++++.+-++|..+-.-....++
T Consensus 285 hPVa~Vatt-keIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~--e~E~Lq~ha~~vG~~L~~lL~~~k~kh~----- 356 (452)
T KOG1403|consen 285 HPVAAVATT-KEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVC--EDENLQEHAQQVGEKLEVLLRRLKQKHE----- 356 (452)
T ss_pred CeeeEEecc-HHHHHHhccccceehhccCCCchhHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHHHHHHhhhcc-----
Confidence 569999987 88888776422 1212233566666554443322 1233344444444444321000001111
Q ss_pred cchHHHhhhcCCCcceEEEEEc-------CCHHHHHHHHHhcCcc-ccccccCCccccccCcccccCCCCChhhHhhcCC
Q psy12791 291 PNHELAKSQWSGTSGMLSFYVN-------GGAEETRIFLESLLIF-RCAESLGGIESLADLPAEMTHKSIPKETRDALGI 362 (393)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~-~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~ 362 (393)
.+-+.+|.|.++-+.+- ++..++..++.+++.. ++..+..|...
T Consensus 357 -----~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~----------------------- 408 (452)
T KOG1403|consen 357 -----CIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHR----------------------- 408 (452)
T ss_pred -----ceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCCC-----------------------
Confidence 11233556666666653 2445677777777653 24444433211
Q ss_pred CCCeEE----EEecCCChHHHHHHHHHHHHHh
Q psy12791 363 TDNLVR----LSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 363 ~~~~iR----ls~~~~~~~~~i~~l~~al~~~ 390 (393)
+.+. ++|..++.++.+..|.+.|.-+
T Consensus 409 --NilKiKPPmCFneena~e~v~~ld~iLT~m 438 (452)
T KOG1403|consen 409 --NILKIKPPMCFNEENADEFVLGLDEILTVM 438 (452)
T ss_pred --ceeecCCCcccChhhHHHHHHHHHHHHHHH
Confidence 1111 6788889999888888887643
No 389
>KOG1405|consensus
Probab=97.99 E-value=7.8e-05 Score=66.91 Aligned_cols=175 Identities=11% Similarity=0.097 Sum_probs=99.0
Q ss_pred HHHHHhhcC------CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccc------c--cCCCCC
Q psy12791 133 IENLIKYIK------PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAY------Y--QKSLPW 194 (393)
Q Consensus 133 ~~~l~~~l~------~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~------~--~~~~~~ 194 (393)
++++++.+. ..+.+++++..+...|.-.- .+.|.+++++| ++.+|+||++..+- . ...++.
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh-~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH-GVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhc-CeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 455555553 13568888888988887663 88999999999 99999999998621 1 123445
Q ss_pred cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHh
Q psy12791 195 GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLE 274 (393)
Q Consensus 195 ~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 274 (393)
..|+| +|||=+. . +||.. +++++-.- ..+.+..+...|.-..++...++.+ ..+.+.++....-.+|.
T Consensus 334 PpD~v--TFSKK~q-~----gGffh--~~~frpn~-pYrifNTWmGdP~k~lll~~vv~~I--~~~~Ll~n~~~vG~~l~ 401 (484)
T KOG1405|consen 334 PPDVV--TFSKKFQ-T----GGFFH--DEEFRPNE-PYRIFNTWMGDPSKNLLLEEVVQEI--KREDLLNNVAHVGKALL 401 (484)
T ss_pred Cccce--ehhhhhh-c----Ccccc--CcccCCCc-hHHHhhhhcCChHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHH
Confidence 67888 5778773 3 55544 23433211 1111112222344444443333332 34444555544444332
Q ss_pred h-CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccc
Q psy12791 275 S-HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCA 331 (393)
Q Consensus 275 ~-~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 331 (393)
. +..+. -.+|+ .....+|.|.++.+.++ +.+..+.|+..++..++.
T Consensus 402 ~gL~~Lq-~~~p~---------~~~~~RGrGTF~a~d~p-s~~~Rdk~i~~~~~nGv~ 448 (484)
T KOG1405|consen 402 KGLLELQ-AKYPG---------KINNLRGRGTFIAWDCP-SGSIRDKLILIARLNGVN 448 (484)
T ss_pred HHHHHHH-HhCch---------hhhcccccceEEEEeCC-ChHHHHHHHHHHHHcCce
Confidence 1 11110 12232 12233567888999984 778888888888765443
No 390
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.90 E-value=0.0013 Score=59.39 Aligned_cols=217 Identities=16% Similarity=0.058 Sum_probs=125.1
Q ss_pred ccccCCCCchHHHHHHHHHHHhCCCcEEEeccHH--HHH-H-HHHH--hcCCCCeEEEcCCCccchHHHHHHhcccCCcE
Q psy12791 51 FEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGL--GAV-T-AVTH--LLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE 124 (393)
Q Consensus 51 ~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~--~al-~-~~~~--~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~ 124 (393)
..|+ ++..+..|++++-+.+|-...+-+--|- +.| . .+.. -..||.+.++++..|..|.+.. .+..|..
T Consensus 73 EAYa--gsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h---~~~ng~~ 147 (471)
T COG3033 73 EAYA--GSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGH---IQINGAT 147 (471)
T ss_pred hhhc--ccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHH---HHhcCCc
Confidence 3454 3567788999999999976555555553 333 2 2222 2346766777777777654332 3456766
Q ss_pred EEeeCCC---------------CHHHHHhhcCC----CCcEEEEe-cCCCCcccccC---HHHHHHHHHhCCCcEEEEeC
Q psy12791 125 VDFVDLR---------------KIENLIKYIKP----NTKMVWIE-NPTNPLMTVFD---VKAISAVVKQHPDILLVLDN 181 (393)
Q Consensus 125 v~~~~~~---------------d~~~l~~~l~~----~~~~v~l~-~p~nptG~~~~---~~~l~~l~~~~~~~~livDe 181 (393)
++.++.+ |++.+++.+++ +...|+++ +.|...|...+ ++++.++|++| +++++.|.
T Consensus 148 ~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky-~ipvv~Da 226 (471)
T COG3033 148 PRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKY-DIPVVMDA 226 (471)
T ss_pred cccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHc-CCcEEeeh
Confidence 6655442 67888887753 35566664 44445555554 78899999999 99999998
Q ss_pred ccCc----ccccCCCC--------------CcCcEEEEcccccccCCCCceEEEEEecChH---HHHHHHHHHH------
Q psy12791 182 TFLT----AYYQKSLP--------------WGVDIVLYSLTKYMNGHSDVVMGATVTNDDS---LQARLKFLQN------ 234 (393)
Q Consensus 182 a~~~----~~~~~~~~--------------~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~---~~~~~~~~~~------ 234 (393)
+-.. +.-+.... .-+|-.+-|.-|-. +.. .+|+++.+++. +...++....
T Consensus 227 ~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~--lvn-mGGfl~~~D~~~fDvy~~~~~~~V~~eG~~ 303 (471)
T COG3033 227 ARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDG--LVN-MGGFLCFKDDSFFDVYEECRTLVVVQEGFP 303 (471)
T ss_pred hhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccc--eec-cccEEEecCccHHHHHHHHHhheEeecccc
Confidence 7654 11111100 12566777877753 333 38999998773 5555543321
Q ss_pred hcCCCCCHHHHHHHHhccCCHH-HHHHHHHHHHHHHHHHHhhC
Q psy12791 235 SMGVVPSPFDCWLVTRGLKTLP-CRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~ 276 (393)
.+|+........++....+..+ ...+...+..++|.+.|...
T Consensus 304 tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~ 346 (471)
T COG3033 304 TYGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGLEEA 346 (471)
T ss_pred ccCcccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 2233332222222222222211 23333345567888888754
No 391
>KOG2040|consensus
Probab=97.79 E-value=0.00051 Score=66.46 Aligned_cols=208 Identities=20% Similarity=0.173 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHhCCCc-EEEeccHHHH----HHHHHHhc-CCCC----eEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 61 RRNLERCIASLEEAKH-GLCYSSGLGA----VTAVTHLL-SAGD----HIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 61 ~~~lr~~la~~~~~~~-~i~~~~G~~a----l~~~~~~~-~~gd----~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
..+|++.|++..|-+. ++-.+||++. +.+|.+.+ ..|+ ..++|.-.|+. ....+...|.+|+.+.+
T Consensus 584 f~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGT----NPASA~MagmkvvpV~~ 659 (1001)
T KOG2040|consen 584 FTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGT----NPASAAMAGMKVVPVGC 659 (1001)
T ss_pred HHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCC----ChhhHHhcCCEEEEeec
Confidence 4567778888888774 6777888774 25565543 3332 45777778874 45567889999999987
Q ss_pred C-----CHHHHHhhcCC---CCcEEEEecCCCCccccc-CHHHHHHHHHhCCCcEEEEeCccCcc--cccCCCCCcCcEE
Q psy12791 131 R-----KIENLIKYIKP---NTKMVWIENPTNPLMTVF-DVKAISAVVKQHPDILLVLDNTFLTA--YYQKSLPWGVDIV 199 (393)
Q Consensus 131 ~-----d~~~l~~~l~~---~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~livDea~~~~--~~~~~~~~~~di~ 199 (393)
+ |..+|.++.++ +-.++.++.|+.- |..- .++++.++.++| |.-+..|.+-..- -...|-++|.|+.
T Consensus 660 ~~~G~id~~dLk~kaekh~~~Laa~MvTYPST~-GvfE~~i~d~cd~iHeh-GGQVYlDGANMNAqVGlc~pGd~GaDV~ 737 (1001)
T KOG2040|consen 660 DANGNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVFEEGIDDICDIIHEH-GGQVYLDGANMNAQVGLCRPGDIGADVC 737 (1001)
T ss_pred cCCCCccHHHHHHHHHHhhhhhheeEEeccccc-ccccccHHHHHHHHHhc-CCEEEecCCCccceecccCCccccccce
Confidence 6 67777776543 4678888999854 5544 499999999999 9999999876531 1246777899999
Q ss_pred EEccccccc-----CCCCceEEEEEecChHHHHHHHHHHH------------------hcCCCC-CHH-HHHHHHhccCC
Q psy12791 200 LYSLTKYMN-----GHSDVVMGATVTNDDSLQARLKFLQN------------------SMGVVP-SPF-DCWLVTRGLKT 254 (393)
Q Consensus 200 ~~S~sK~~~-----G~~G~r~G~~~~~~~~~~~~~~~~~~------------------~~~~~~-~~~-~~~~~~~~~~~ 254 (393)
--.+||.|+ |-|| +|=+..+ +.+...+..+.. .||+.. -|. .+++...+...
T Consensus 738 HLNLHKTFcIPHGGGGPg--~gPIgVK-~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~G 814 (1001)
T KOG2040|consen 738 HLNLHKTFCIPHGGGGPG--MGPIGVK-KHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGG 814 (1001)
T ss_pred eecccceeeecCCCCCCC--CCccchh-hhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcccc
Confidence 999999885 3444 6666665 555544422110 122211 111 22333333344
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCC
Q psy12791 255 LPCRLKEHERGSIEVAKFLESHP 277 (393)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~l~~~~ 277 (393)
+.+--+...-|+.++...|+++=
T Consensus 815 L~~as~~AiLNaNYMakRLe~hY 837 (1001)
T KOG2040|consen 815 LKDASKIAILNANYMAKRLESHY 837 (1001)
T ss_pred cchhhHHHhhhhHHHHHHHhhcc
Confidence 44333444567778888888653
No 392
>KOG2040|consensus
Probab=97.75 E-value=5.2e-05 Score=73.06 Aligned_cols=162 Identities=16% Similarity=0.228 Sum_probs=106.7
Q ss_pred eeeCCCCCCCCCccccCCCCc-hHHHH------HHHHHHHhCCC--cEEEeccHHHHH--HHHHHhcCCCCeEEEcCCCc
Q psy12791 39 FKQNTPGQPPQGFEYSRSNNP-TRRNL------ERCIASLEEAK--HGLCYSSGLGAV--TAVTHLLSAGDHIISGDDVY 107 (393)
Q Consensus 39 ~~~~~~~~~~~~~~y~~~~~~-~~~~l------r~~la~~~~~~--~~i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y 107 (393)
..+.+.+.+.+.-.|+.|... ..-+| +..++++.|.+ ++-++--|+.|- .++..-..++++.++...+|
T Consensus 136 I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~h 215 (1001)
T KOG2040|consen 136 ILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRINKRKKFVVDSNCH 215 (1001)
T ss_pred HHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHHHHHHHHhhcccceEEecCCCC
Confidence 334444554555566666322 22233 34467777766 567777777664 33333355677899999999
Q ss_pred cchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCc-c
Q psy12791 108 GGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLT-A 186 (393)
Q Consensus 108 ~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~-~ 186 (393)
+.+....+-.++-+|++++..+ +++.... .++...|++..|... |.+.|..++.+.+++. +.++++----.. -
T Consensus 216 pqtlsV~~TRa~~~~i~v~~~~---~~~~~~s-~~~v~gvlvQYP~t~-G~i~d~~el~~~a~~~-~s~vv~atDLLaLt 289 (1001)
T KOG2040|consen 216 PQTLSVVKTRAKGFGIKVVVSD---IKEADYS-SKDVSGVLVQYPDTE-GSVLDFDELVELAHAN-GSLVVMATDLLALT 289 (1001)
T ss_pred cchhhhhhccccccceeEEecC---HHHhhcc-ccceeEEEEEcCCCC-CcccCHHHHHHHhhcc-CceEEEeehhhHHH
Confidence 9887777766777787766554 3333222 235788888999855 8999999999999998 877665432222 2
Q ss_pred cccCCCCCcCcEEEEccccc
Q psy12791 187 YYQKSLPWGVDIVLYSLTKY 206 (393)
Q Consensus 187 ~~~~~~~~~~di~~~S~sK~ 206 (393)
....|-++|+||.++|...+
T Consensus 290 iLrpPgefGaDIavGSsQRF 309 (1001)
T KOG2040|consen 290 ILRPPGEFGADIAVGSSQRF 309 (1001)
T ss_pred ccCChhhcCceeeecccccc
Confidence 33456678999999997664
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.46 E-value=0.00028 Score=57.50 Aligned_cols=50 Identities=18% Similarity=0.238 Sum_probs=41.8
Q ss_pred chHHHHHHHHHHHh----C--C---CcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCcc
Q psy12791 59 PTRRNLERCIASLE----E--A---KHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYG 108 (393)
Q Consensus 59 ~~~~~lr~~la~~~----~--~---~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~ 108 (393)
.+..+||+++|+++ | . ++.|++++|+++ + .++..++++||.|+++.|+|+
T Consensus 92 ~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 92 HGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 46788999999986 3 2 268999999886 7 777888999999999999996
No 394
>KOG2790|consensus
Probab=94.77 E-value=2.8 Score=37.31 Aligned_cols=153 Identities=16% Similarity=0.207 Sum_probs=86.5
Q ss_pred hHHHHHHHHHHHhCCCc---EEEe-ccHHHHH-HHHHHhc--CCC---CeEEEcCCCccchHHHHHHhcccCCcE-EEee
Q psy12791 60 TRRNLERCIASLEEAKH---GLCY-SSGLGAV-TAVTHLL--SAG---DHIISGDDVYGGTYRYFAQVAPKIGLE-VDFV 128 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~~---~i~~-~~G~~al-~~~~~~~--~~g---d~vl~~~~~y~~~~~~~~~~~~~~g~~-v~~~ 128 (393)
...+.+..+-++++.++ .+++ ++|+... .+.+.++ +.| |.|+.-...-- .+.. ++++|.. .+..
T Consensus 53 ii~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~K----A~~E-Akk~~~~~~V~~ 127 (370)
T KOG2790|consen 53 IINDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAK----AAEE-AKKYGTPNIVIP 127 (370)
T ss_pred HHHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhhccccCCccceEEeccccHH----HHHH-HHhhCCceEEec
Confidence 34556677788889883 4444 4444445 3333333 444 56676543322 2333 4555543 4443
Q ss_pred CCC--------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCC-cCcEE
Q psy12791 129 DLR--------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPW-GVDIV 199 (393)
Q Consensus 129 ~~~--------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~-~~di~ 199 (393)
+.. |.+.++. +++.+.|+.|.--...|+-++.-- +-.-. +.++|.|-+.- +...|++. ...++
T Consensus 128 ~~k~y~ygkvPd~~~w~~--~~da~yvyyCaNETVHGVEf~~~P---~~~~~-~~vlVaDmSSn--flSrpvDvsk~gvi 199 (370)
T KOG2790|consen 128 KLKSYTYGKVPDPSTWEL--NPDASYVYYCANETVHGVEFDFIP---VNDPK-GAVLVADMSSN--FLSRPVDVSKFGVI 199 (370)
T ss_pred cccccccCcCCChhhccc--CCCccEEEEecCceeeceecCCCC---CCCCC-CceEEEecccc--hhcCCccchhcceE
Confidence 332 5555543 456678888765556676664211 11224 88999998654 23356553 35688
Q ss_pred EEcccccccCCCCceEEEEEecChHHHHHH
Q psy12791 200 LYSLTKYMNGHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 200 ~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~ 229 (393)
+....|.. |++|+ -.++.+ ++++...
T Consensus 200 ~aGAQKN~-G~aG~--Tvvivr-~dllg~~ 225 (370)
T KOG2790|consen 200 FAGAQKNV-GPAGV--TVVIVR-KDLLGNA 225 (370)
T ss_pred Eecccccc-Ccccc--EEEEEe-hhhhccc
Confidence 89999999 79994 334445 5555543
No 395
>KOG3843|consensus
Probab=91.71 E-value=1.1 Score=39.40 Aligned_cols=152 Identities=16% Similarity=0.161 Sum_probs=82.9
Q ss_pred CcEEEe--ccHHHHHHHHHHh--cCC-CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--------CHHHHHhhcC
Q psy12791 75 KHGLCY--SSGLGAVTAVTHL--LSA-GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--------KIENLIKYIK 141 (393)
Q Consensus 75 ~~~i~~--~~G~~al~~~~~~--~~~-gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--------d~~~l~~~l~ 141 (393)
..++++ .+|++--.++..+ -+| .+.|+.+...--+. ++. .-..|.+.+.+..- |++.+++.+.
T Consensus 76 ~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~---~ks-i~~agfepiiie~i~d~d~l~tdleav~~~ie 151 (432)
T KOG3843|consen 76 ANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSC---FKS-IIHAGFEPIIIENILDGDELITDLEAVEAIIE 151 (432)
T ss_pred hceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHH---HHH-HHhcCCCceeeeccccchHHHHhHHHHHHHHH
Confidence 356665 4555531333332 333 35677666554432 222 23357776665431 6777777765
Q ss_pred CC-Cc--EEEEecC--CCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc------CCCCC-cCcEEEEcccccccC
Q psy12791 142 PN-TK--MVWIENP--TNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ------KSLPW-GVDIVLYSLTKYMNG 209 (393)
Q Consensus 142 ~~-~~--~v~l~~p--~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~------~~~~~-~~di~~~S~sK~~~G 209 (393)
+. .. +.+.+.- -.| -..-.+++|..+|..| +++-+|.++|+.-... ..-.. ..|.++.|+-|.|.
T Consensus 152 e~g~dcilci~sttscfap-r~pd~leaiaaica~~-diphivnnayglqsee~i~~iaa~~~~grida~vqsldknf~- 228 (432)
T KOG3843|consen 152 ELGEDCILCIHSTTSCFAP-RSPDNLEAIAAICAAH-DIPHIVNNAYGLQSEECIHKIAAAAECGRIDAFVQSLDKNFM- 228 (432)
T ss_pred HhCCceEEEEeecccccCC-CCCchHHHHHHHHHcc-CchhhhccccccchHHHHHHHHHHhhhccHHHHHHHhhhcce-
Confidence 43 22 2222111 111 1111399999999999 9999999999852110 11112 25788999999996
Q ss_pred CCCceEEEEEec-ChHHHHHHHHHHHh
Q psy12791 210 HSDVVMGATVTN-DDSLQARLKFLQNS 235 (393)
Q Consensus 210 ~~G~r~G~~~~~-~~~~~~~~~~~~~~ 235 (393)
.|= +|.+++. +..+++.+.+.-+.
T Consensus 229 vpv--ggaiia~fk~n~iq~iak~ypg 253 (432)
T KOG3843|consen 229 VPV--GGAIIAAFKDNFIQEIAKMYPG 253 (432)
T ss_pred eec--chhHhhHhHHHHHHHHHHhCCC
Confidence 442 5555432 34566666554443
No 396
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=82.52 E-value=3.7 Score=35.81 Aligned_cols=87 Identities=24% Similarity=0.206 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhcCCCCeE-EEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC
Q psy12791 83 GLGAVTAVTHLLSAGDHI-ISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD 161 (393)
Q Consensus 83 G~~al~~~~~~~~~gd~v-l~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 161 (393)
|..+-..+.++++.+-.| ++.++.-. .....++..|++++..+.+|.+.+.+++. +...|++..+.+......-
T Consensus 8 G~~G~~v~~~L~~~~~~V~~l~R~~~~----~~~~~l~~~g~~vv~~d~~~~~~l~~al~-g~d~v~~~~~~~~~~~~~~ 82 (233)
T PF05368_consen 8 GNQGRSVVRALLSAGFSVRALVRDPSS----DRAQQLQALGAEVVEADYDDPESLVAALK-GVDAVFSVTPPSHPSELEQ 82 (233)
T ss_dssp SHHHHHHHHHHHHTTGCEEEEESSSHH----HHHHHHHHTTTEEEES-TT-HHHHHHHHT-TCSEEEEESSCSCCCHHHH
T ss_pred cHHHHHHHHHHHhCCCCcEEEEeccch----hhhhhhhcccceEeecccCCHHHHHHHHc-CCceEEeecCcchhhhhhh
Confidence 433323444444455444 34443311 22333566799999999999999999997 5566666655443222223
Q ss_pred HHHHHHHHHhCCCc
Q psy12791 162 VKAISAVVKQHPDI 175 (393)
Q Consensus 162 ~~~l~~l~~~~~~~ 175 (393)
...+.+.|++. |+
T Consensus 83 ~~~li~Aa~~a-gV 95 (233)
T PF05368_consen 83 QKNLIDAAKAA-GV 95 (233)
T ss_dssp HHHHHHHHHHH-T-
T ss_pred hhhHHHhhhcc-cc
Confidence 56677788877 65
No 397
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=74.34 E-value=7.3 Score=29.91 Aligned_cols=88 Identities=27% Similarity=0.403 Sum_probs=55.9
Q ss_pred HHHHHhcccCCcEEEeeCCC-CHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHHHhC-CCcEEEEeCccCcccc
Q psy12791 112 RYFAQVAPKIGLEVDFVDLR-KIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVVKQH-PDILLVLDNTFLTAYY 188 (393)
Q Consensus 112 ~~~~~~~~~~g~~v~~~~~~-d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~livDea~~~~~~ 188 (393)
......++..|.++..++.+ +.+++.+.+. .++++|.++....+ ......++.+..++. |++.+++=..+.....
T Consensus 18 ~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~~~--~~~~~~~l~~~~k~~~p~~~iv~GG~~~t~~~ 95 (121)
T PF02310_consen 18 LYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGISVSMTP--NLPEAKRLARAIKERNPNIPIVVGGPHATADP 95 (121)
T ss_dssp HHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESSST--HHHHHHHHHHHHHTTCTTSEEEEEESSSGHHH
T ss_pred HHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccCcC--cHHHHHHHHHHHHhcCCCCEEEEECCchhcCh
Confidence 34556678889999998775 4566666553 46888888665433 233467777777775 7899999988765333
Q ss_pred cCCCC--CcCcEEEE
Q psy12791 189 QKSLP--WGVDIVLY 201 (393)
Q Consensus 189 ~~~~~--~~~di~~~ 201 (393)
..-+. .+.|.++.
T Consensus 96 ~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 96 EEILREYPGIDYVVR 110 (121)
T ss_dssp HHHHHHHHTSEEEEE
T ss_pred HHHhccCcCcceecC
Confidence 22222 35565543
No 398
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=73.22 E-value=50 Score=28.32 Aligned_cols=92 Identities=13% Similarity=0.122 Sum_probs=55.2
Q ss_pred cEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-CHHHHHhhcCCCCcEEEEecCCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-KIENLIKYIKPNTKMVWIENPTN 154 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-d~~~l~~~l~~~~~~v~l~~p~n 154 (393)
.+++++.|..+...+..+++.|-.|.+.+|.... .+...++.. ++.++.-. +.+++ .+..+|+ ..+++
T Consensus 11 ~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~---~l~~l~~~~--~i~~~~~~~~~~dl-----~~~~lVi-~at~d 79 (205)
T TIGR01470 11 AVLVVGGGDVALRKARLLLKAGAQLRVIAEELES---ELTLLAEQG--GITWLARCFDADIL-----EGAFLVI-AATDD 79 (205)
T ss_pred eEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCH---HHHHHHHcC--CEEEEeCCCCHHHh-----CCcEEEE-ECCCC
Confidence 6889999998886677777778778777777764 344433333 34443321 22332 1334444 44554
Q ss_pred CcccccCHHHHHHHHHhCCCcEE-EEeCcc
Q psy12791 155 PLMTVFDVKAISAVVKQHPDILL-VLDNTF 183 (393)
Q Consensus 155 ptG~~~~~~~l~~l~~~~~~~~l-ivDea~ 183 (393)
+. .-..+.+.|++. ++++ ++|+..
T Consensus 80 ~~----ln~~i~~~a~~~-~ilvn~~d~~e 104 (205)
T TIGR01470 80 EE----LNRRVAHAARAR-GVPVNVVDDPE 104 (205)
T ss_pred HH----HHHHHHHHHHHc-CCEEEECCCcc
Confidence 41 235788999998 8876 356543
No 399
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=67.57 E-value=14 Score=33.65 Aligned_cols=89 Identities=20% Similarity=0.132 Sum_probs=52.0
Q ss_pred EEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-C-----HHHHHhhcCCCCc-EEE
Q psy12791 77 GLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-K-----IENLIKYIKPNTK-MVW 148 (393)
Q Consensus 77 ~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-d-----~~~l~~~l~~~~~-~v~ 148 (393)
.|=.|||.++| +++.+-.+-=+.+++-..+.+. ..+++.+.+|++++.+|.. . .+.+.+...+.+. +++
T Consensus 65 IVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~---er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~~~p~~~~~ 141 (300)
T COG0031 65 IVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQ---ERRKLLRALGAEVILTPGAPGNMKGAIERAKELAAEIPGYAVW 141 (300)
T ss_pred EEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCH---HHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHHhCCCceEc
Confidence 34469999998 6665554433344444445543 5677889999999999873 1 2222223333434 776
Q ss_pred E---ecCCCCcccccC-HHHHHHH
Q psy12791 149 I---ENPTNPLMTVFD-VKAISAV 168 (393)
Q Consensus 149 l---~~p~nptG~~~~-~~~l~~l 168 (393)
. +||.||-..... -.||.+-
T Consensus 142 ~~Qf~NpaN~~aH~~tT~~EI~~~ 165 (300)
T COG0031 142 LNQFENPANPEAHYETTGPEIWQQ 165 (300)
T ss_pred hhhcCCCccHHHHHhhhHHHHHHH
Confidence 6 577777655532 3444433
No 400
>PRK04296 thymidine kinase; Provisional
Probab=65.70 E-value=26 Score=29.60 Aligned_cols=96 Identities=16% Similarity=0.217 Sum_probs=47.9
Q ss_pred ccH-HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcC---CCCcEEEEecCCCC
Q psy12791 81 SSG-LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIK---PNTKMVWIENPTNP 155 (393)
Q Consensus 81 ~~G-~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~---~~~~~v~l~~p~np 155 (393)
++| ++++ ..+..+...|.+|++..|.+...+ .....+...|.++..+.....+++.+.+. .+..+|++.-.+.
T Consensus 12 GsGKTT~~l~~~~~~~~~g~~v~i~k~~~d~~~-~~~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~dvviIDEaq~- 89 (190)
T PRK04296 12 NSGKSTELLQRAYNYEERGMKVLVFKPAIDDRY-GEGKVVSRIGLSREAIPVSSDTDIFELIEEEGEKIDCVLIDEAQF- 89 (190)
T ss_pred CCHHHHHHHHHHHHHHHcCCeEEEEeccccccc-cCCcEecCCCCcccceEeCChHHHHHHHHhhCCCCCEEEEEcccc-
Confidence 345 3343 445555566888887766443211 12344566665544322233333333332 2567788866642
Q ss_pred cccccC---HHHHHHHHHhCCCcEEEEeCcc
Q psy12791 156 LMTVFD---VKAISAVVKQHPDILLVLDNTF 183 (393)
Q Consensus 156 tG~~~~---~~~l~~l~~~~~~~~livDea~ 183 (393)
++ +.++.+.++.. ++.+++=.-.
T Consensus 90 ----l~~~~v~~l~~~l~~~-g~~vi~tgl~ 115 (190)
T PRK04296 90 ----LDKEQVVQLAEVLDDL-GIPVICYGLD 115 (190)
T ss_pred ----CCHHHHHHHHHHHHHc-CCeEEEEecC
Confidence 33 33444554556 7666664433
No 401
>PLN02476 O-methyltransferase
Probab=64.92 E-value=59 Score=29.42 Aligned_cols=120 Identities=12% Similarity=0.177 Sum_probs=54.5
Q ss_pred chHHHHHHHHHHHhCCCcEEE--eccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE--EEeeCCCCHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLC--YSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE--VDFVDLRKIE 134 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~--~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~--v~~~~~~d~~ 134 (393)
+...++...+++..+....+= +..|.+++.+..+ +.++.+|+..+..-. .....+..++..|.. +..+ ..|..
T Consensus 104 ~~~g~lL~~L~~~~~ak~VLEIGT~tGySal~lA~a-l~~~G~V~TiE~d~e-~~~~Ar~n~~~aGl~~~I~li-~GdA~ 180 (278)
T PLN02476 104 PDQAQLLAMLVQILGAERCIEVGVYTGYSSLAVALV-LPESGCLVACERDSN-SLEVAKRYYELAGVSHKVNVK-HGLAA 180 (278)
T ss_pred HHHHHHHHHHHHhcCCCeEEEecCCCCHHHHHHHHh-CCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEE-EcCHH
Confidence 344455555565555554333 3444444432222 233445554443321 112333444555653 3222 23333
Q ss_pred H-HHhhc----CCCCcEEEEecCCCCcccccC-HHHHHHHHHhCCCcEEEEeCccCcc
Q psy12791 135 N-LIKYI----KPNTKMVWIENPTNPLMTVFD-VKAISAVVKQHPDILLVLDNTFLTA 186 (393)
Q Consensus 135 ~-l~~~l----~~~~~~v~l~~p~nptG~~~~-~~~l~~l~~~~~~~~livDea~~~~ 186 (393)
+ |.+.. ...-.+||+...- +...+ ++.+.++.+ +|.++++|++...+
T Consensus 181 e~L~~l~~~~~~~~FD~VFIDa~K---~~Y~~y~e~~l~lL~--~GGvIV~DNvL~~G 233 (278)
T PLN02476 181 ESLKSMIQNGEGSSYDFAFVDADK---RMYQDYFELLLQLVR--VGGVIVMDNVLWHG 233 (278)
T ss_pred HHHHHHHhcccCCCCCEEEECCCH---HHHHHHHHHHHHhcC--CCcEEEEecCccCC
Confidence 3 32222 1235788886542 22111 444444433 37788889887543
No 402
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=63.71 E-value=33 Score=26.64 Aligned_cols=70 Identities=20% Similarity=0.349 Sum_probs=45.3
Q ss_pred HHhcccCCcEEEeeCCCCHHHHHhhcC--CCCcEEEEecCCCCcccccCHHHHHHHHHhC-CCcEEEEeCccCccc
Q psy12791 115 AQVAPKIGLEVDFVDLRKIENLIKYIK--PNTKMVWIENPTNPLMTVFDVKAISAVVKQH-PDILLVLDNTFLTAY 187 (393)
Q Consensus 115 ~~~~~~~g~~v~~~~~~d~~~l~~~l~--~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~livDea~~~~~ 187 (393)
...++..|.++...+....++..+.+. .++++|.++... .......++.+..++. |++.+++=..+....
T Consensus 9 aa~l~~~g~~v~~~~~~~~~~~~~~~~~~~~pdiv~~S~~~---~~~~~~~~~~~~ik~~~p~~~iv~GG~~~t~~ 81 (127)
T cd02068 9 AAVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISLMT---SAIYEALELAKIAKEVLPNVIVVVGGPHATFF 81 (127)
T ss_pred HHHHHHCCCeeeecCCCCHHHHHHHHHHhcCCCEEEEeecc---ccHHHHHHHHHHHHHHCCCCEEEECCcchhhC
Confidence 344566677777777655555444443 468888886422 2333567777888875 679999988876543
No 403
>PLN02672 methionine S-methyltransferase
Probab=62.76 E-value=1.5e+02 Score=32.52 Aligned_cols=169 Identities=14% Similarity=0.087 Sum_probs=94.2
Q ss_pred ccCC-CCchHHHHHHHHHHHhC----CC----cEEEeccHHHHH-HHHH------HhcCCCCeEEEcCCCccchHHHHHH
Q psy12791 53 YSRS-NNPTRRNLERCIASLEE----AK----HGLCYSSGLGAV-TAVT------HLLSAGDHIISGDDVYGGTYRYFAQ 116 (393)
Q Consensus 53 y~~~-~~~~~~~lr~~la~~~~----~~----~~i~~~~G~~al-~~~~------~~~~~gd~vl~~~~~y~~~~~~~~~ 116 (393)
|..| +..+...+|..+|.++. .+ +.+++.+-+.|+ .++. +++..+..-.++. .|..
T Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 490 (1082)
T PLN02672 419 YFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPK--------KWLT 490 (1082)
T ss_pred CCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCCH--------HHHh
Confidence 4444 45678899999999754 32 567777778888 5443 2233332222221 1111
Q ss_pred hccc----------CCcEEEeeCCC-C-HHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccC
Q psy12791 117 VAPK----------IGLEVDFVDLR-K-IENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFL 184 (393)
Q Consensus 117 ~~~~----------~g~~v~~~~~~-d-~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~ 184 (393)
.+.. -.++|++-|.. | +-++.+++ ++++|+..-.....-+..-.+.|...+++. |+.++.|.+--
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 567 (1082)
T PLN02672 491 SLAIENATSDSKSDDVITVIEAPRQSDLVIELIKKL--KPQVVVTGMADFEMRTSTAFEHLLNVTAEI-GARLFLDISDH 567 (1082)
T ss_pred HhhhhcccccCccCCeEEEEeCCCcchHHHHHHHhC--CCeEEEEeccchhhhhHHHHHHHHHHHHhh-CcEEEEehhhh
Confidence 1111 12455555543 2 23344444 456777654443322222378888889999 99999998654
Q ss_pred ccccc-------------CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH
Q psy12791 185 TAYYQ-------------KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN 234 (393)
Q Consensus 185 ~~~~~-------------~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~ 234 (393)
..... .++.. .-.++..+-|.- =.+.+-+.+++.-+..+.+.+.+...
T Consensus 568 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (1082)
T PLN02672 568 LELSSLPGSNGVLKYLAGHPLPS-HAAIICGLVKNQ-VYSDLEVAFVISENEAVLKALSKTGE 628 (1082)
T ss_pred eeeccCCCcccHHHHhcCCCCCc-chhHhhhhhhcc-ccccceEEEEecCcHHHHHHHHHHHH
Confidence 31111 11221 224444566655 36788899999876777777765443
No 404
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=60.97 E-value=33 Score=31.16 Aligned_cols=132 Identities=12% Similarity=0.119 Sum_probs=74.9
Q ss_pred EEeccHHHHH-HHH-HHhcC--CCC-eEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCC-CCcEEEE--
Q psy12791 78 LCYSSGLGAV-TAV-THLLS--AGD-HIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKP-NTKMVWI-- 149 (393)
Q Consensus 78 i~~~~G~~al-~~~-~~~~~--~gd-~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~-~~~~v~l-- 149 (393)
+++|+|+-=| ..+ ...++ +.+ .+.+...+|.+....+......-....+..+..|.+.+.+.+.+ ++.+|+=
T Consensus 3 iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfA 82 (340)
T COG1088 3 ILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVHFA 82 (340)
T ss_pred EEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEEec
Confidence 5677776656 443 33443 224 35677889998765555555544566666677788888888765 3444432
Q ss_pred --ecCC----CCccccc----CHHHHHHHHHhCCC-----cEEEEeCccCccccc-------CCCC---------CcCcE
Q psy12791 150 --ENPT----NPLMTVF----DVKAISAVVKQHPD-----ILLVLDNTFLTAYYQ-------KSLP---------WGVDI 198 (393)
Q Consensus 150 --~~p~----nptG~~~----~~~~l~~l~~~~~~-----~~livDea~~~~~~~-------~~~~---------~~~di 198 (393)
+|.. +|.-.+. ---.|.+.++++ . ..+=.||+|++.... .|.. ...|.
T Consensus 83 AESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~-~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~ 161 (340)
T COG1088 83 AESHVDRSIDGPAPFIQTNVVGTYTLLEAARKY-WGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDL 161 (340)
T ss_pred hhccccccccChhhhhhcchHHHHHHHHHHHHh-cccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHH
Confidence 1221 1211111 134577777777 4 245569999974332 1221 13567
Q ss_pred EEEcccccccCCC
Q psy12791 199 VLYSLTKYMNGHS 211 (393)
Q Consensus 199 ~~~S~sK~~~G~~ 211 (393)
++.+..+.+ |+|
T Consensus 162 lVray~~TY-glp 173 (340)
T COG1088 162 LVRAYVRTY-GLP 173 (340)
T ss_pred HHHHHHHHc-CCc
Confidence 777777777 565
No 405
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=60.27 E-value=41 Score=27.69 Aligned_cols=76 Identities=18% Similarity=0.130 Sum_probs=47.9
Q ss_pred HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHH
Q psy12791 88 TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISA 167 (393)
Q Consensus 88 ~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~ 167 (393)
.++..+++.|-+|.+....-.. ... ..+++++..+..|++.+.+++. +...|+.+.+.++. .....+.+.+
T Consensus 13 ~l~~~L~~~~~~V~~~~R~~~~----~~~---~~~~~~~~~d~~d~~~~~~al~-~~d~vi~~~~~~~~-~~~~~~~~~~ 83 (183)
T PF13460_consen 13 ALAKQLLRRGHEVTALVRSPSK----AED---SPGVEIIQGDLFDPDSVKAALK-GADAVIHAAGPPPK-DVDAAKNIIE 83 (183)
T ss_dssp HHHHHHHHTTSEEEEEESSGGG----HHH---CTTEEEEESCTTCHHHHHHHHT-TSSEEEECCHSTTT-HHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEecCchh----ccc---ccccccceeeehhhhhhhhhhh-hcchhhhhhhhhcc-cccccccccc
Confidence 5555666666555543332221 222 6788999999889999999987 56677765544333 2333666777
Q ss_pred HHHhC
Q psy12791 168 VVKQH 172 (393)
Q Consensus 168 l~~~~ 172 (393)
.+++.
T Consensus 84 a~~~~ 88 (183)
T PF13460_consen 84 AAKKA 88 (183)
T ss_dssp HHHHT
T ss_pred ccccc
Confidence 77776
No 406
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=58.09 E-value=62 Score=29.96 Aligned_cols=102 Identities=20% Similarity=0.242 Sum_probs=63.8
Q ss_pred HHHH-HHHHHhcCCCCeEEEcC-CCccch-HHHHHHhcccCCcEEEeeCCC-CH-----HHHHhhcCCCCcEEEEecC--
Q psy12791 84 LGAV-TAVTHLLSAGDHIISGD-DVYGGT-YRYFAQVAPKIGLEVDFVDLR-KI-----ENLIKYIKPNTKMVWIENP-- 152 (393)
Q Consensus 84 ~~al-~~~~~~~~~gd~vl~~~-~~y~~~-~~~~~~~~~~~g~~v~~~~~~-d~-----~~l~~~l~~~~~~v~l~~p-- 152 (393)
++-+ -+...+.+.|.+|++.. -+|-+- ...+....++.|++++.-+.. |+ +.++.+...+..+|++.+.
T Consensus 153 TTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGR 232 (340)
T COG0552 153 TTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGR 232 (340)
T ss_pred HhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCccc
Confidence 3446 44444567787776543 455321 112334456788888875432 43 5667777778899999655
Q ss_pred -CCCcccccCHHHHHHHHHhC-C----CcEEEEeCccCc
Q psy12791 153 -TNPLMTVFDVKAISAVVKQH-P----DILLVLDNTFLT 185 (393)
Q Consensus 153 -~nptG~~~~~~~l~~l~~~~-~----~~~livDea~~~ 185 (393)
||-+..+-.+++|.+++++. + .++++.|.+-+-
T Consensus 233 Lhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGq 271 (340)
T COG0552 233 LHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQ 271 (340)
T ss_pred ccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccCh
Confidence 56665555688888888875 2 277777998764
No 407
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=56.30 E-value=77 Score=27.19 Aligned_cols=123 Identities=14% Similarity=0.118 Sum_probs=65.3
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHH--HHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCCCCHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGL--GAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDLRKIE 134 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~--~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~~d~~ 134 (393)
+...++-..+++..++...+-+++++ +++.+..+ +.++.+|+..+..-. .....+..++..|. ++..+.-+-.+
T Consensus 31 ~~~g~lL~~l~~~~~~k~vLEIGt~~GySal~la~~-l~~~g~i~tiE~~~~-~~~~A~~~~~~ag~~~~I~~~~gda~~ 108 (205)
T PF01596_consen 31 PETGQLLQMLVRLTRPKRVLEIGTFTGYSALWLAEA-LPEDGKITTIEIDPE-RAEIARENFRKAGLDDRIEVIEGDALE 108 (205)
T ss_dssp HHHHHHHHHHHHHHT-SEEEEESTTTSHHHHHHHHT-STTTSEEEEEESSHH-HHHHHHHHHHHTTGGGGEEEEES-HHH
T ss_pred HHHHHHHHHHHHhcCCceEEEeccccccHHHHHHHh-hcccceEEEecCcHH-HHHHHHHHHHhcCCCCcEEEEEeccHh
Confidence 44455667777778877777776654 44433333 344456766655432 22234445565664 33333322223
Q ss_pred HHHhhcCC----CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccc
Q psy12791 135 NLIKYIKP----NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAY 187 (393)
Q Consensus 135 ~l~~~l~~----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~ 187 (393)
.+.+...+ .-.+||+...- ....--++.+.++.+. |.++|+|++...+.
T Consensus 109 ~l~~l~~~~~~~~fD~VFiDa~K--~~y~~y~~~~~~ll~~--ggvii~DN~l~~G~ 161 (205)
T PF01596_consen 109 VLPELANDGEEGQFDFVFIDADK--RNYLEYFEKALPLLRP--GGVIIADNVLWRGS 161 (205)
T ss_dssp HHHHHHHTTTTTSEEEEEEESTG--GGHHHHHHHHHHHEEE--EEEEEEETTTGGGG
T ss_pred hHHHHHhccCCCceeEEEEcccc--cchhhHHHHHhhhccC--CeEEEEccccccce
Confidence 33333222 35899997642 2222225555555543 88999999887653
No 408
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=56.12 E-value=53 Score=26.41 Aligned_cols=95 Identities=11% Similarity=0.083 Sum_probs=50.2
Q ss_pred EEEeccHHHHH--HHHHHhcCCCC-eEEEcCCC-ccchHHHHHHhcccCCcEEEeeCCC--CHHHHHhhcC------CCC
Q psy12791 77 GLCYSSGLGAV--TAVTHLLSAGD-HIISGDDV-YGGTYRYFAQVAPKIGLEVDFVDLR--KIENLIKYIK------PNT 144 (393)
Q Consensus 77 ~i~~~~G~~al--~~~~~~~~~gd-~vl~~~~~-y~~~~~~~~~~~~~~g~~v~~~~~~--d~~~l~~~l~------~~~ 144 (393)
.+++++|+.+| .....+++.|+ .|++.... -..........++..+.++..++.| +.+++++.++ ...
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~l 81 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPL 81 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46777888887 44456777755 44444333 0111122323344556777766654 6655555443 235
Q ss_pred cEEEEecCCCCcccccC--HHHHHHHHHh
Q psy12791 145 KMVWIENPTNPLMTVFD--VKAISAVVKQ 171 (393)
Q Consensus 145 ~~v~l~~p~nptG~~~~--~~~l~~l~~~ 171 (393)
..++.+....+.+...+ .+++.+..+-
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 82 DILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp SEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhcccc
Confidence 66666655555555554 4555555544
No 409
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=54.78 E-value=65 Score=21.86 Aligned_cols=60 Identities=15% Similarity=0.147 Sum_probs=35.8
Q ss_pred HHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCC-CCcccccCHHHHHHHHHhCCCcEEEEe
Q psy12791 114 FAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPT-NPLMTVFDVKAISAVVKQHPDILLVLD 180 (393)
Q Consensus 114 ~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~-nptG~~~~~~~l~~l~~~~~~~~livD 180 (393)
+...++..|.++..+... .+.+. .....+++.+|. +.+- ....++|.+++++- |-++|+|
T Consensus 10 ~~~~L~~~g~~v~~~~~~-~~~l~----~~~~tll~i~~~~~~~~-~~~~~~l~~~v~~G-~~lvl~a 70 (70)
T PF14258_consen 10 LYQLLEEQGVKVERWRKP-YEALE----ADDGTLLVIGPDLRLSE-PEEAEALLEWVEAG-NTLVLAA 70 (70)
T ss_pred HHHHHHHCCCeeEEeccc-HHHhC----CCCCEEEEEeCCCCCCc-hHHHHHHHHHHHcC-CEEEEeC
Confidence 455667779999876542 33332 233444444555 3221 23478999999976 7777764
No 410
>KOG1805|consensus
Probab=53.59 E-value=96 Score=33.07 Aligned_cols=132 Identities=13% Similarity=0.137 Sum_probs=69.5
Q ss_pred HHHHHHHHhCCC-cEEEe---ccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------
Q psy12791 64 LERCIASLEEAK-HGLCY---SSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------ 131 (393)
Q Consensus 64 lr~~la~~~~~~-~~i~~---~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------ 131 (393)
=|+++-+.+.++ ..++. ++|-+. | .++..++..|.+|++...+|.++-+...+ ++..|+.+..+-..
T Consensus 674 Qr~A~~k~L~aedy~LI~GMPGTGKTTtI~~LIkiL~~~gkkVLLtsyThsAVDNILiK-L~~~~i~~lRLG~~~kih~~ 752 (1100)
T KOG1805|consen 674 QRQALLKALAAEDYALILGMPGTGKTTTISLLIKILVALGKKVLLTSYTHSAVDNILIK-LKGFGIYILRLGSEEKIHPD 752 (1100)
T ss_pred HHHHHHHHHhccchheeecCCCCCchhhHHHHHHHHHHcCCeEEEEehhhHHHHHHHHH-HhccCcceeecCCccccchH
Confidence 355566656665 35554 667444 6 66777778899999999999976554443 23334443322211
Q ss_pred -------------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccc--ccCCCCCcC
Q psy12791 132 -------------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAY--YQKSLPWGV 196 (393)
Q Consensus 132 -------------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~--~~~~~~~~~ 196 (393)
+.++++..++ ++.+|..+.- |.--|+ =.-+++ + ++|+|||-.... .-.|+....
T Consensus 753 v~e~~~~~~~s~ks~~~l~~~~~-~~~IVa~TCl----gi~~pl----f~~R~F-D-~cIiDEASQI~lP~~LgPL~~s~ 821 (1100)
T KOG1805|consen 753 VEEFTLTNETSEKSYADLKKFLD-QTSIVACTCL----GINHPL----FVNRQF-D-YCIIDEASQILLPLCLGPLSFSN 821 (1100)
T ss_pred HHHHhcccccchhhHHHHHHHhC-CCcEEEEEcc----CCCchh----hhcccc-C-EEEEccccccccchhhhhhhhcc
Confidence 3455556654 4555554211 111111 111335 4 789999865421 112333344
Q ss_pred cEEEEcccccc
Q psy12791 197 DIVLYSLTKYM 207 (393)
Q Consensus 197 di~~~S~sK~~ 207 (393)
-+|+-.=|+=+
T Consensus 822 kFVLVGDh~QL 832 (1100)
T KOG1805|consen 822 KFVLVGDHYQL 832 (1100)
T ss_pred eEEEecccccC
Confidence 45544444444
No 411
>PF00265 TK: Thymidine kinase; InterPro: IPR001267 Thymidine kinase (TK) (2.7.1.21 from EC) is an ubiquitous enzyme that catalyzes the ATP-dependent phosphorylation of thymidine. Two different families of Thymidine kinase have been identified [, ] and are represented in this entry; one groups together Thymidine kinase from herpesviruses, as well as cytosolic thymidylate kinases and the second family groups Thymidine kinase from various sources that include, vertebrates, bacteria, the Bacteriophage T4, poxviruses, African swine fever virus (ASFV) and Fish lymphocystis disease virus (FLDV). The major capsid protein of insect iridescent viruses also belongs to this family.; GO: 0004797 thymidine kinase activity, 0005524 ATP binding; PDB: 1XX6_B 2J9R_A 2J87_B 3E2I_A 2JA1_A 2UZ3_B 2B8T_B 2WVJ_A 1W4R_F 1XBT_F ....
Probab=53.19 E-value=24 Score=29.43 Aligned_cols=99 Identities=9% Similarity=0.152 Sum_probs=61.2
Q ss_pred ccH-HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcCCCCcEEEEecCCCCc
Q psy12791 81 SSG-LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIKPNTKMVWIENPTNPL 156 (393)
Q Consensus 81 ~~G-~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~~~~~~v~l~~p~npt 156 (393)
.+| ++++ ..+..+-..|.++++..|....-+. ...+..+.|...... +.+++.++...+..++.+|.+.-.+.-+
T Consensus 11 ~sGKS~eLi~~~~~~~~~~~~v~~~kp~~D~R~~-~~~I~s~~g~~~~~~~~~~~~~~~~~~~~~~~~dvI~IDEaQFf~ 89 (176)
T PF00265_consen 11 FSGKSTELIRRIHRYEIAGKKVLVFKPAIDTRYG-EDKIVSHDGISLEAIVDPIDNLFEIIDILENDYDVIGIDEAQFFD 89 (176)
T ss_dssp TSSHHHHHHHHHHHHHHTT-EEEEEEESTSCCCC-SSEEEHTTSCEEEEESSEESSGGGGGGGCCTTCSEEEESSGGGST
T ss_pred CChhHHHHHHHHHHHHhCCCeEEEEEecccCcCC-CCeEEecCCCcccccccchhhHHHHHHHhccCCCEEEEechHhhH
Confidence 355 4445 5555555567888887776542110 113445567766665 4456677777777668999997777543
Q ss_pred ccccCHHHHHHHHHhCCCcEEEEeCccC
Q psy12791 157 MTVFDVKAISAVVKQHPDILLVLDNTFL 184 (393)
Q Consensus 157 G~~~~~~~l~~l~~~~~~~~livDea~~ 184 (393)
-++.++.+.+... |+.|++=.--.
T Consensus 90 ---~~i~~l~~~~~~~-g~~Vi~~GL~~ 113 (176)
T PF00265_consen 90 ---EQIVQLVEILANK-GIPVICAGLDT 113 (176)
T ss_dssp ---TTHHHHHHHHHHT-T-EEEEEEESB
T ss_pred ---HHHHHHHHHHHhC-CCeEEEEeeCC
Confidence 3577788888888 99888765433
No 412
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=52.72 E-value=59 Score=29.18 Aligned_cols=88 Identities=9% Similarity=0.060 Sum_probs=50.8
Q ss_pred EEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcC-----CC-CcEEEE
Q psy12791 78 LCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIK-----PN-TKMVWI 149 (393)
Q Consensus 78 i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~-----~~-~~~v~l 149 (393)
|++++++--+ .++..+++.|-.|.+..-.-.. ....+++++..+..|.+.+.++++ .. ...+++
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~--------~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSS--------SAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcc--------ccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence 4454444445 4455566777666544322111 122466677777778998888873 23 677777
Q ss_pred ecCCCCcccccCHHHHHHHHHhCCCc
Q psy12791 150 ENPTNPLMTVFDVKAISAVVKQHPDI 175 (393)
Q Consensus 150 ~~p~nptG~~~~~~~l~~l~~~~~~~ 175 (393)
+.|..+ ........+.+.|++. |+
T Consensus 74 ~~~~~~-~~~~~~~~~i~aa~~~-gv 97 (285)
T TIGR03649 74 VAPPIP-DLAPPMIKFIDFARSK-GV 97 (285)
T ss_pred eCCCCC-ChhHHHHHHHHHHHHc-CC
Confidence 766433 2223456677788887 65
No 413
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=52.49 E-value=82 Score=28.96 Aligned_cols=83 Identities=17% Similarity=0.182 Sum_probs=57.9
Q ss_pred CeE-EEcCCCcc---chHHHHHHhcccCCcEEEeeCCC---CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHH
Q psy12791 98 DHI-ISGDDVYG---GTYRYFAQVAPKIGLEVDFVDLR---KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVK 170 (393)
Q Consensus 98 d~v-l~~~~~y~---~~~~~~~~~~~~~g~~v~~~~~~---d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~ 170 (393)
++| ++..|... ....++...++..|+++++.... |.....+.+..++.+||+..-|. ..--.+.+...+.
T Consensus 160 k~Igv~Y~p~E~ns~~l~eelk~~A~~~Gl~vve~~v~~~ndi~~a~~~l~g~~d~i~~p~dn~---i~s~~~~l~~~a~ 236 (322)
T COG2984 160 KSIGVLYNPGEANSVSLVEELKKEARKAGLEVVEAAVTSVNDIPRAVQALLGKVDVIYIPTDNL---IVSAIESLLQVAN 236 (322)
T ss_pred eeEEEEeCCCCcccHHHHHHHHHHHHHCCCEEEEEecCcccccHHHHHHhcCCCcEEEEecchH---HHHHHHHHHHHHH
Confidence 445 66666662 23355778889999999998775 55555666667889999844431 1224778888888
Q ss_pred hCCCcEEEEeCccC
Q psy12791 171 QHPDILLVLDNTFL 184 (393)
Q Consensus 171 ~~~~~~livDea~~ 184 (393)
+. +++++.+++-.
T Consensus 237 ~~-kiPli~sd~~~ 249 (322)
T COG2984 237 KA-KIPLIASDTSS 249 (322)
T ss_pred Hh-CCCeecCCHHH
Confidence 88 99999887543
No 414
>COG4098 comFA Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair]
Probab=51.56 E-value=1.2e+02 Score=28.24 Aligned_cols=113 Identities=10% Similarity=0.180 Sum_probs=65.3
Q ss_pred CchHHHHHHHHHHHhCCC-c---EEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCC-cEEEeeCC
Q psy12791 58 NPTRRNLERCIASLEEAK-H---GLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG-LEVDFVDL 130 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~-~---~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g-~~v~~~~~ 130 (393)
.++.+....++-...... + .-+.++|-++ + ..+...++.|+.|.+.+|--.-....+.+.-+.+. +.+..+--
T Consensus 99 s~~Q~~as~~l~q~i~~k~~~lv~AV~GaGKTEMif~~i~~al~~G~~vciASPRvDVclEl~~Rlk~aF~~~~I~~Lyg 178 (441)
T COG4098 99 SPGQKKASNQLVQYIKQKEDTLVWAVTGAGKTEMIFQGIEQALNQGGRVCIASPRVDVCLELYPRLKQAFSNCDIDLLYG 178 (441)
T ss_pred ChhHHHHHHHHHHHHHhcCcEEEEEecCCCchhhhHHHHHHHHhcCCeEEEecCcccchHHHHHHHHHhhccCCeeeEec
Confidence 356666666666665544 3 3356888888 5 77778889999999998866544333443322221 33332222
Q ss_pred CCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc
Q psy12791 131 RKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ 189 (393)
Q Consensus 131 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~ 189 (393)
++.+.. +.-+|+. .-.++.++-+.+ + ++|+||+-+.++..
T Consensus 179 ~S~~~f------r~plvVa-----------TtHQLlrFk~aF-D-~liIDEVDAFP~~~ 218 (441)
T COG4098 179 DSDSYF------RAPLVVA-----------TTHQLLRFKQAF-D-LLIIDEVDAFPFSD 218 (441)
T ss_pred CCchhc------cccEEEE-----------ehHHHHHHHhhc-c-EEEEeccccccccC
Confidence 221111 1233332 334667777777 5 78999998876543
No 415
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=51.49 E-value=1.6e+02 Score=25.39 Aligned_cols=92 Identities=16% Similarity=0.123 Sum_probs=56.2
Q ss_pred cEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
..+++++|..+..-+..+++.|..|.+..|.+.. .+.......+++... ..-+.+++. +..+|++...+ +
T Consensus 14 ~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~---el~~~~~~~~i~~~~-~~~~~~~~~-----~~~lviaAt~d-~ 83 (210)
T COG1648 14 KVLVVGGGSVALRKARLLLKAGADVTVVSPEFEP---ELKALIEEGKIKWIE-REFDAEDLD-----DAFLVIAATDD-E 83 (210)
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccH---HHHHHHHhcCcchhh-cccChhhhc-----CceEEEEeCCC-H
Confidence 5788888988886677788889999988888843 455544444433222 111333332 24555554433 2
Q ss_pred cccccCHHHHHHHHHhCCCcEE-EEeCc
Q psy12791 156 LMTVFDVKAISAVVKQHPDILL-VLDNT 182 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~~~~~l-ivDea 182 (393)
. --++|.+.|+++ ++++ ++|..
T Consensus 84 ~----ln~~i~~~a~~~-~i~vNv~D~p 106 (210)
T COG1648 84 E----LNERIAKAARER-RILVNVVDDP 106 (210)
T ss_pred H----HHHHHHHHHHHh-CCceeccCCc
Confidence 2 147889999998 6643 44543
No 416
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=50.90 E-value=1e+02 Score=27.59 Aligned_cols=74 Identities=18% Similarity=0.170 Sum_probs=39.2
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEee-CC-CCHHHHHhhcCCCCcEEEEecCCCCcccccC----HHHHHHHHHh
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFV-DL-RKIENLIKYIKPNTKMVWIENPTNPLMTVFD----VKAISAVVKQ 171 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~-~~-~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~ 171 (393)
|-+++|+.-+... ..+...++..|+..+.+ .. .+.+.+..........||+..-...||...+ +++..+.+++
T Consensus 117 dGlIipDLP~ee~-~~~~~~~~~~gl~~I~lv~p~t~~~Ri~~i~~~a~gFiY~vs~~GvTG~~~~~~~~l~~~i~~ik~ 195 (259)
T PF00290_consen 117 DGLIIPDLPPEES-EELREAAKKHGLDLIPLVAPTTPEERIKKIAKQASGFIYLVSRMGVTGSRTELPDELKEFIKRIKK 195 (259)
T ss_dssp EEEEETTSBGGGH-HHHHHHHHHTT-EEEEEEETTS-HHHHHHHHHH-SSEEEEESSSSSSSTTSSCHHHHHHHHHHHHH
T ss_pred CEEEEcCCChHHH-HHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCcEEEeeccCCCCCCcccchHHHHHHHHHHHh
Confidence 5577777555322 24555666777766554 22 2344444443334567777777777777653 4445555555
Q ss_pred C
Q psy12791 172 H 172 (393)
Q Consensus 172 ~ 172 (393)
+
T Consensus 196 ~ 196 (259)
T PF00290_consen 196 H 196 (259)
T ss_dssp T
T ss_pred h
Confidence 4
No 417
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=50.73 E-value=68 Score=24.42 Aligned_cols=70 Identities=13% Similarity=0.185 Sum_probs=44.3
Q ss_pred HHHHhcccCCcEEEeeCCC-CHHHHHhhc-CCCCcEEEEecCCCCcccccCHHHHHHHHHhC-C-CcEEEEeCccC
Q psy12791 113 YFAQVAPKIGLEVDFVDLR-KIENLIKYI-KPNTKMVWIENPTNPLMTVFDVKAISAVVKQH-P-DILLVLDNTFL 184 (393)
Q Consensus 113 ~~~~~~~~~g~~v~~~~~~-d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~-~~~livDea~~ 184 (393)
.....++..|.+++.+..+ ..+++.+.+ +.++.+|.++.-... ......++.+.+++. + ++.+++=....
T Consensus 18 ~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~~~--~~~~~~~~i~~l~~~~~~~~~i~vGG~~~ 91 (119)
T cd02067 18 IVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLLTT--HMTLMKEVIEELKEAGLDDIPVLVGGAIV 91 (119)
T ss_pred HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccc--cHHHHHHHHHHHHHcCCCCCeEEEECCCC
Confidence 4556678899999887654 455665554 346888888654322 234467777777776 4 56666665443
No 418
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=50.60 E-value=1.7e+02 Score=25.49 Aligned_cols=91 Identities=12% Similarity=0.055 Sum_probs=55.4
Q ss_pred cEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
.++++++|.-|..-+..+++.|-.|.+..|.+... +...+..-.+++..=+. +.+++ .+..+|+.++.+ +
T Consensus 27 ~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~e---l~~l~~~~~i~~~~r~~-~~~dl-----~g~~LViaATdD-~ 96 (223)
T PRK05562 27 KVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKE---FLDLKKYGNLKLIKGNY-DKEFI-----KDKHLIVIATDD-E 96 (223)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHH---HHHHHhCCCEEEEeCCC-ChHHh-----CCCcEEEECCCC-H
Confidence 58888999888866677777888888888888653 33333333344433222 33444 245666664432 2
Q ss_pred cccccCHHHHHHHHHhCCCcE-EEEeC
Q psy12791 156 LMTVFDVKAISAVVKQHPDIL-LVLDN 181 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~~~~~-livDe 181 (393)
. =-++|.+.|++. +++ .++|+
T Consensus 97 ~----vN~~I~~~a~~~-~~lvn~vd~ 118 (223)
T PRK05562 97 K----LNNKIRKHCDRL-YKLYIDCSD 118 (223)
T ss_pred H----HHHHHHHHHHHc-CCeEEEcCC
Confidence 1 146788899987 654 44565
No 419
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=49.46 E-value=96 Score=27.82 Aligned_cols=10 Identities=20% Similarity=0.524 Sum_probs=5.6
Q ss_pred CcEEEEecCC
Q psy12791 144 TKMVWIENPT 153 (393)
Q Consensus 144 ~~~v~l~~p~ 153 (393)
...|++.+|+
T Consensus 145 i~~I~lv~Pt 154 (263)
T CHL00200 145 IELILLIAPT 154 (263)
T ss_pred CCEEEEECCC
Confidence 4555555555
No 420
>PRK10681 DNA-binding transcriptional repressor DeoR; Provisional
Probab=49.06 E-value=1.9e+02 Score=25.61 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=27.9
Q ss_pred hHHHHHHHHHHHhCCCcEEEeccHHHHHHHHHHhcCCCCeEEEc
Q psy12791 60 TRRNLERCIASLEEAKHGLCYSSGLGAVTAVTHLLSAGDHIISG 103 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~~~i~~~~G~~al~~~~~~~~~gd~vl~~ 103 (393)
...++.++.++++...+.|++.+|++.+.++..+....+-.++.
T Consensus 78 ~K~~IA~~Aa~lI~~g~tIflD~GtT~~~la~~L~~~~~ltvvT 121 (252)
T PRK10681 78 EKRRAAQLAATLVEPNQTLFFDCGTTTPWIIEAIDNELPFTAVC 121 (252)
T ss_pred HHHHHHHHHHhhcCCCCEEEEECCccHHHHHHhcCCCCCeEEEE
Confidence 34455566666777678999999999875555553332334444
No 421
>COG2004 RPS24A Ribosomal protein S24E [Translation, ribosomal structure and biogenesis]
Probab=48.50 E-value=25 Score=26.46 Aligned_cols=24 Identities=17% Similarity=0.306 Sum_probs=20.2
Q ss_pred CCchHHHHHHHHHHHhCCC-cEEEe
Q psy12791 57 NNPTRRNLERCIASLEEAK-HGLCY 80 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~-~~i~~ 80 (393)
++|...++|+.||+.++++ +.|++
T Consensus 30 ~TPSr~evrekla~~l~~d~e~VvV 54 (107)
T COG2004 30 PTPSRKEVREKLAAMLGADKELVVV 54 (107)
T ss_pred CCCCHHHHHHHHHHHHCCCcceEEE
Confidence 6789999999999999998 45544
No 422
>PF01282 Ribosomal_S24e: Ribosomal protein S24e; InterPro: IPR001976 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the S24e ribosomal proteins from eukaryotes and archaebacteria. These proteins have 101 to 148 amino acids.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2V94_B 1YWX_A 2G1D_A 3IZ6_U 1XN9_A 2XZM_P 2XZN_P 3U5G_Y 3J16_D 3IZB_U ....
Probab=48.43 E-value=21 Score=25.66 Aligned_cols=24 Identities=13% Similarity=0.325 Sum_probs=18.2
Q ss_pred CCchHHHHHHHHHHHhCCC-cEEEe
Q psy12791 57 NNPTRRNLERCIASLEEAK-HGLCY 80 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~-~~i~~ 80 (393)
+.|...++++.||+.++++ +.|++
T Consensus 11 ~Tpsr~ei~~klA~~~~~~~~~ivv 35 (84)
T PF01282_consen 11 PTPSRKEIREKLAAMLNVDPDLIVV 35 (84)
T ss_dssp SS--HHHHHHHHHHHHTSTGCCEEE
T ss_pred CCCCHHHHHHHHHHHhCCCCCeEEE
Confidence 6789999999999999987 45544
No 423
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=48.18 E-value=55 Score=30.48 Aligned_cols=68 Identities=16% Similarity=0.259 Sum_probs=38.2
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-CHHHHHhhcCCCCcEEEEe-cCCCCcccccCHHHHHHHHHh
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-KIENLIKYIKPNTKMVWIE-NPTNPLMTVFDVKAISAVVKQ 171 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-d~~~l~~~l~~~~~~v~l~-~p~nptG~~~~~~~l~~l~~~ 171 (393)
.+|++.+...- ++ ..+.+...|+++..+|.+ +.+++.+. +++.|+++ .|.+|.-.-.-++.|.++...
T Consensus 180 ~~Vv~iD~GvK--~n-Ilr~L~~rg~~vtVVP~~t~~eeIl~~---~pDGiflSNGPGDP~~~~~~i~~ik~l~~~ 249 (368)
T COG0505 180 KHVVVIDFGVK--RN-ILRELVKRGCRVTVVPADTSAEEILAL---NPDGIFLSNGPGDPAPLDYAIETIKELLGT 249 (368)
T ss_pred cEEEEEEcCcc--HH-HHHHHHHCCCeEEEEcCCCCHHHHHhh---CCCEEEEeCCCCChhHHHHHHHHHHHHhcc
Confidence 35555553332 22 334456679999999887 56666543 56788884 566663222224444444443
No 424
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=48.16 E-value=2.2e+02 Score=26.06 Aligned_cols=102 Identities=9% Similarity=0.116 Sum_probs=54.7
Q ss_pred cEEEeccHHHHH-HHHHHhcCCCC--eEEEc--CCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEE-
Q psy12791 76 HGLCYSSGLGAV-TAVTHLLSAGD--HIISG--DDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWI- 149 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~~~~~~~gd--~vl~~--~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l- 149 (393)
+.|++-+-+.++ ..+....+.|. +|++. .|.+.+. ...+.++..|+++..+.-. .....+ .+...|++
T Consensus 121 ~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~--~~ak~L~~~gI~~~~I~Ds---a~~~~~-~~vd~VivG 194 (301)
T COG1184 121 DVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGR--IMAKELRQSGIPVTVIVDS---AVGAFM-SRVDKVLVG 194 (301)
T ss_pred CEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHH--HHHHHHHHcCCceEEEech---HHHHHH-HhCCEEEEC
Confidence 445444445565 55555556665 45443 4677643 3455678889888887621 122222 23444544
Q ss_pred ecCCCCcccccC---HHHHHHHHHhCCCcEEE-EeCccC
Q psy12791 150 ENPTNPLMTVFD---VKAISAVVKQHPDILLV-LDNTFL 184 (393)
Q Consensus 150 ~~p~nptG~~~~---~~~l~~l~~~~~~~~li-vDea~~ 184 (393)
...---.|.+.. -..|+..|++. +.+++ +=|+|=
T Consensus 195 ad~I~~nG~lvnkiGT~~lA~~A~e~-~~Pf~v~aesyK 232 (301)
T COG1184 195 ADAILANGALVNKIGTSPLALAAREL-RVPFYVVAESYK 232 (301)
T ss_pred ccceecCCcEEeccchHHHHHHHHHh-CCCEEEEeeeec
Confidence 222223344444 45677788888 66544 445553
No 425
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=47.35 E-value=72 Score=31.61 Aligned_cols=68 Identities=18% Similarity=0.277 Sum_probs=45.9
Q ss_pred hcccCC-cEEEeeCCC----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhC-CCcEEEEeCccCccc
Q psy12791 117 VAPKIG-LEVDFVDLR----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQH-PDILLVLDNTFLTAY 187 (393)
Q Consensus 117 ~~~~~g-~~v~~~~~~----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~livDea~~~~~ 187 (393)
.++..| .+|..++.. +.+++.+.+.+ ++++|.++.. |.......++++.+++. |++.+|+=..+....
T Consensus 31 ~L~~~G~~~V~iiD~~~~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t~~ 105 (497)
T TIGR02026 31 ALLDAGYHDVTFLDAMTGPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPTFM 105 (497)
T ss_pred HHHhcCCcceEEecccccCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcCcC
Confidence 356678 577777653 45666666543 6888888543 23344466788888875 899999999887544
No 426
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=46.96 E-value=86 Score=31.64 Aligned_cols=100 Identities=13% Similarity=0.236 Sum_probs=57.5
Q ss_pred EEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-C---HHHHHhhcCC-CCcEEEEe
Q psy12791 77 GLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-K---IENLIKYIKP-NTKMVWIE 150 (393)
Q Consensus 77 ~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-d---~~~l~~~l~~-~~~~v~l~ 150 (393)
.++.|+|.-.+ .-+.+++.+|=.++| +|--.=+.+ =...++..|+.+..+... + ...+...+.. ..+++++.
T Consensus 37 vvmPTGgGKSlCyQiPAll~~G~TLVV-SPLiSLM~D-QV~~l~~~Gi~A~~lnS~l~~~e~~~v~~~l~~g~~klLyis 114 (590)
T COG0514 37 VVMPTGGGKSLCYQIPALLLEGLTLVV-SPLISLMKD-QVDQLEAAGIRAAYLNSTLSREERQQVLNQLKSGQLKLLYIS 114 (590)
T ss_pred EEccCCCCcchHhhhHHHhcCCCEEEE-CchHHHHHH-HHHHHHHcCceeehhhcccCHHHHHHHHHHHhcCceeEEEEC
Confidence 44556666666 778888888855555 444331111 123456788888777654 2 3334444433 47888873
Q ss_pred --cCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcc
Q psy12791 151 --NPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTA 186 (393)
Q Consensus 151 --~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~ 186 (393)
.-.+| .+.+..++-+-.++++||||...
T Consensus 115 PErl~~~--------~f~~~L~~~~i~l~vIDEAHCiS 144 (590)
T COG0514 115 PERLMSP--------RFLELLKRLPISLVAIDEAHCIS 144 (590)
T ss_pred chhhcCh--------HHHHHHHhCCCceEEechHHHHh
Confidence 22333 23333334336799999999853
No 427
>KOG1251|consensus
Probab=46.89 E-value=1.3e+02 Score=26.70 Aligned_cols=98 Identities=19% Similarity=0.120 Sum_probs=59.2
Q ss_pred cEEEeccHHHH--HHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--CHHHHHhhcCCCCcEEEEec
Q psy12791 76 HGLCYSSGLGA--VTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--KIENLIKYIKPNTKMVWIEN 151 (393)
Q Consensus 76 ~~i~~~~G~~a--l~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--d~~~l~~~l~~~~~~v~l~~ 151 (393)
..|..+||-++ +.....++.---.|++|...-.. -....+.+|.++++.+.. |-|.+.+.+.+++..+++ +
T Consensus 75 gvithSSGNHaqAlalaAk~~giPa~IVvP~~AP~~----Kv~a~~~Yga~ii~~e~~~~sRE~va~~ltee~g~~~i-~ 149 (323)
T KOG1251|consen 75 GVITHSSGNHAQALALAAKILGIPATIVVPKDAPIC----KVAATRGYGANIIFCEPTVESRESVAKDLTEETGYYLI-H 149 (323)
T ss_pred ceEeecCCcHHHHHHHHHHhcCCCeEEEecCCChHH----HHHHHHhcCceEEEecCccchHHHHHHHHHHhcCcEEe-C
Confidence 57888999776 43334444434478887654331 223457899999998764 677888888777766665 4
Q ss_pred CCCC----cccccCHHHHHHHHHhCCCcEEEE
Q psy12791 152 PTNP----LMTVFDVKAISAVVKQHPDILLVL 179 (393)
Q Consensus 152 p~np----tG~~~~~~~l~~l~~~~~~~~liv 179 (393)
|.|- .|.-.-..||.+-..+- +++++.
T Consensus 150 Py~~p~vIaGqgTiA~ElleqVg~i-Dalfvp 180 (323)
T KOG1251|consen 150 PYNHPSVIAGQGTIALELLEQVGEI-DALFVP 180 (323)
T ss_pred CCCCcceeeccchHHHHHHHhhCcc-ceEEEe
Confidence 4433 22222255555555555 555543
No 428
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=45.65 E-value=2.6e+02 Score=26.99 Aligned_cols=94 Identities=19% Similarity=0.286 Sum_probs=59.1
Q ss_pred cEEEeccHHHHHHHHHHhcCCC-CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAG-DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTN 154 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~g-d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~n 154 (393)
..++++.|-.+-.++..+.+.| ..|.+.+-++. ....+++..|+++.. ++++...+. +..+|+.++. .
T Consensus 180 ~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~e----rA~~La~~~~~~~~~-----l~el~~~l~-~~DvVissTs-a 248 (414)
T COG0373 180 KVLVIGAGEMGELVAKHLAEKGVKKITIANRTLE----RAEELAKKLGAEAVA-----LEELLEALA-EADVVISSTS-A 248 (414)
T ss_pred eEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHH----HHHHHHHHhCCeeec-----HHHHHHhhh-hCCEEEEecC-C
Confidence 5778888855434445555666 78888888886 466778888855554 445555554 3566665321 1
Q ss_pred CcccccCHHHHHHHHHhCCCcEEEEeCc
Q psy12791 155 PLMTVFDVKAISAVVKQHPDILLVLDNT 182 (393)
Q Consensus 155 ptG~~~~~~~l~~l~~~~~~~~livDea 182 (393)
| -.+.+.+.+....+..+. ++++|=+
T Consensus 249 ~-~~ii~~~~ve~a~~~r~~-~livDia 274 (414)
T COG0373 249 P-HPIITREMVERALKIRKR-LLIVDIA 274 (414)
T ss_pred C-ccccCHHHHHHHHhcccC-eEEEEec
Confidence 2 245567777777666524 8999975
No 429
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=45.12 E-value=1e+02 Score=27.59 Aligned_cols=63 Identities=14% Similarity=0.153 Sum_probs=35.3
Q ss_pred cEEEeccHHHHH-HHH-HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--CHHHHHh
Q psy12791 76 HGLCYSSGLGAV-TAV-THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--KIENLIK 138 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~-~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--d~~~l~~ 138 (393)
..+++|+.++.| ..+ ..+.+.|..+++..-.-.--.....++....|+++..++.| ++++++.
T Consensus 7 ~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~ 73 (265)
T COG0300 7 KTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALER 73 (265)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHH
Confidence 356676667778 554 45677887776654333322223344445567777666665 5544444
No 430
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=44.94 E-value=98 Score=24.32 Aligned_cols=69 Identities=16% Similarity=0.263 Sum_probs=45.8
Q ss_pred HHHHHhcccCCcEEEeeCCC-CHHHHHhh-cCCCCcEEEEecCCCCcccccCHHHHHHHHHhC--CCcEEEEeCc
Q psy12791 112 RYFAQVAPKIGLEVDFVDLR-KIENLIKY-IKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH--PDILLVLDNT 182 (393)
Q Consensus 112 ~~~~~~~~~~g~~v~~~~~~-d~~~l~~~-l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~--~~~~livDea 182 (393)
+....+++..|.+|+.+..+ .++++.++ .+.++.+|.++.-+.. ....++++.+.+++. .++.+++=.+
T Consensus 17 niv~~~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~t~--~~~~~~~~~~~l~~~gl~~v~vivGG~ 89 (128)
T cd02072 17 KILDHAFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLYGH--GEIDCKGLREKCDEAGLKDILLYVGGN 89 (128)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccC--CHHHHHHHHHHHHHCCCCCCeEEEECC
Confidence 34566778899999998876 55665554 4567888888766622 233477888888876 1445555444
No 431
>PLN02591 tryptophan synthase
Probab=44.75 E-value=1.7e+02 Score=26.08 Aligned_cols=81 Identities=14% Similarity=0.133 Sum_probs=38.9
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeC-CC-CHHHHHhhcCCCCcEEEEecCCCCcccccC----HHHHHHHHHh
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD-LR-KIENLIKYIKPNTKMVWIENPTNPLMTVFD----VKAISAVVKQ 171 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~-~~-d~~~l~~~l~~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~ 171 (393)
|-+++++.-+.. ...+...++..|+..+.+= .. +.+.+..........||+..-...||.... ++++.+.+++
T Consensus 108 ~GviipDLP~ee-~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY~Vs~~GvTG~~~~~~~~~~~~i~~vk~ 186 (250)
T PLN02591 108 HGLVVPDLPLEE-TEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVYLVSSTGVTGARASVSGRVESLLQELKE 186 (250)
T ss_pred CEEEeCCCCHHH-HHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEEEeeCCCCcCCCcCCchhHHHHHHHHHh
Confidence 556666655532 2234555666666655442 22 233344433333455666555556665322 4454444444
Q ss_pred CCCcEEEE
Q psy12791 172 HPDILLVL 179 (393)
Q Consensus 172 ~~~~~liv 179 (393)
+.+.++++
T Consensus 187 ~~~~Pv~v 194 (250)
T PLN02591 187 VTDKPVAV 194 (250)
T ss_pred cCCCceEE
Confidence 32444443
No 432
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=44.37 E-value=1.4e+02 Score=26.83 Aligned_cols=12 Identities=25% Similarity=0.639 Sum_probs=6.8
Q ss_pred CcEEEEecCCCC
Q psy12791 144 TKMVWIENPTNP 155 (393)
Q Consensus 144 ~~~v~l~~p~np 155 (393)
.+.|+++.|+.|
T Consensus 148 i~~I~lvaPtt~ 159 (265)
T COG0159 148 IDPIFLVAPTTP 159 (265)
T ss_pred CcEEEEeCCCCC
Confidence 556666666533
No 433
>PRK05580 primosome assembly protein PriA; Validated
Probab=43.95 E-value=3.1e+02 Score=28.52 Aligned_cols=94 Identities=18% Similarity=0.237 Sum_probs=51.0
Q ss_pred ccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--C---HHHHHhhcCCCCcEEEEecCC
Q psy12791 81 SSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--K---IENLIKYIKPNTKMVWIENPT 153 (393)
Q Consensus 81 ~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--d---~~~l~~~l~~~~~~v~l~~p~ 153 (393)
++|=+++ .++...+..|..+++-.|+-.-..+.+....+..|.++..+... + .+.+.+....++++|+ .+++
T Consensus 172 GSGKT~v~l~~i~~~l~~g~~vLvLvPt~~L~~Q~~~~l~~~fg~~v~~~~s~~s~~~r~~~~~~~~~g~~~IVV-gTrs 250 (679)
T PRK05580 172 GSGKTEVYLQAIAEVLAQGKQALVLVPEIALTPQMLARFRARFGAPVAVLHSGLSDGERLDEWRKAKRGEAKVVI-GARS 250 (679)
T ss_pred CChHHHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHHHHHHhCCCEEEEECCCCHHHHHHHHHHHHcCCCCEEE-eccH
Confidence 6776663 44555566687888888877654445555445567666555332 1 2334444344455554 3332
Q ss_pred CCcccccCHHHHHHHHHhCCCcEEEEeCccCccc
Q psy12791 154 NPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAY 187 (393)
Q Consensus 154 nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~ 187 (393)
....| .+.. .++|+||.+...+
T Consensus 251 ---al~~p-------~~~l--~liVvDEeh~~s~ 272 (679)
T PRK05580 251 ---ALFLP-------FKNL--GLIIVDEEHDSSY 272 (679)
T ss_pred ---Hhccc-------ccCC--CEEEEECCCcccc
Confidence 11111 1222 4899999886543
No 434
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=43.80 E-value=2.3e+02 Score=25.09 Aligned_cols=121 Identities=17% Similarity=0.192 Sum_probs=58.8
Q ss_pred chHHHHHHHHHHHhCCCcEEEecc--HHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCCCCHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSS--GLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDLRKIE 134 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~--G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~~d~~ 134 (393)
+...++-..+++..++...+=+++ |-+++.+..+ +.++.+|+..+..- ......+..++..|. ++..+. .+..
T Consensus 65 ~~~g~lL~~l~~~~~ak~iLEiGT~~GySal~la~a-l~~~g~v~tiE~~~-~~~~~Ar~~~~~ag~~~~I~~~~-G~a~ 141 (247)
T PLN02589 65 ADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALA-LPEDGKILAMDINR-ENYELGLPVIQKAGVAHKIDFRE-GPAL 141 (247)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeChhhHHHHHHHhh-CCCCCEEEEEeCCH-HHHHHHHHHHHHCCCCCceEEEe-ccHH
Confidence 444556666677777665555544 3344432233 34445666665542 122233344455553 233322 2333
Q ss_pred H-HHhhcC-----CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcc
Q psy12791 135 N-LIKYIK-----PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTA 186 (393)
Q Consensus 135 ~-l~~~l~-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~ 186 (393)
+ +.+... ..-.+||+..- .....-.++.+.++.+ +|.+||+|++...+
T Consensus 142 e~L~~l~~~~~~~~~fD~iFiDad--K~~Y~~y~~~~l~ll~--~GGviv~DNvl~~G 195 (247)
T PLN02589 142 PVLDQMIEDGKYHGTFDFIFVDAD--KDNYINYHKRLIDLVK--VGGVIGYDNTLWNG 195 (247)
T ss_pred HHHHHHHhccccCCcccEEEecCC--HHHhHHHHHHHHHhcC--CCeEEEEcCCCCCC
Confidence 3 333221 24678888543 2222222444444443 47889999987643
No 435
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=43.59 E-value=43 Score=27.60 Aligned_cols=48 Identities=15% Similarity=0.243 Sum_probs=37.8
Q ss_pred CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC-CCcEEEEeCccC
Q psy12791 132 KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH-PDILLVLDNTFL 184 (393)
Q Consensus 132 d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~livDea~~ 184 (393)
|..+++.+++.+...+++- +|.+++++++.+.+++. +.+++.+|-..+
T Consensus 12 ~~~~le~~les~~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~G 60 (181)
T COG1954 12 DNKDLEKALESESQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEG 60 (181)
T ss_pred hHHHHHHHhcCCCeEEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcc
Confidence 6788999998888888773 47799999999999998 345667776554
No 436
>PRK10646 ADP-binding protein; Provisional
Probab=43.56 E-value=1.7e+02 Score=23.72 Aligned_cols=89 Identities=16% Similarity=0.135 Sum_probs=50.4
Q ss_pred chHHHHHHHHHHHhCCCcEEEe----ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC---
Q psy12791 59 PTRRNLERCIASLEEAKHGLCY----SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL--- 130 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~----~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~--- 130 (393)
....++-+.||+.+...+.|++ ++|=+.+ ..+...+...+ .|.+|+|.=. +.|. .-+.++.++++
T Consensus 12 ~~t~~l~~~la~~l~~g~vi~L~GdLGaGKTtf~rgl~~~Lg~~~--~V~SPTFtlv-~~Y~----~~~~~l~H~DlYRL 84 (153)
T PRK10646 12 QATLDLGARVAKACDGATVIYLYGDLGAGKTTFSRGFLQALGHQG--NVKSPTYTLV-EPYT----LDNLMVYHFDLYRL 84 (153)
T ss_pred HHHHHHHHHHHHhCCCCcEEEEECCCCCCHHHHHHHHHHHcCCCC--CCCCCCEeeE-EEee----CCCCCEEEEeeccC
Confidence 3456788888888776666665 5565554 44444343322 3789998621 1121 12345666654
Q ss_pred CCHHHHHh-----hcCCCCcEEEEecCCCC
Q psy12791 131 RKIENLIK-----YIKPNTKMVWIENPTNP 155 (393)
Q Consensus 131 ~d~~~l~~-----~l~~~~~~v~l~~p~np 155 (393)
.+.+++.. .+.+ ..+++|++|.+.
T Consensus 85 ~~~~el~~lG~~e~~~~-~~i~~IEW~e~~ 113 (153)
T PRK10646 85 ADPEELEFMGIRDYFAN-DAICLVEWPQQG 113 (153)
T ss_pred CCHHHHHHcchHHhhcC-CCEEEEECCcch
Confidence 34544433 3333 367888999865
No 437
>PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop. They are probably essential to bacteria as members are found in all genomes so far sequenced and no equivalent genes have been found in the archaea and eukaryotes, suggesting the protein may be involved in cell wall biosynthesis. The sequence of YjeE, from Haemophilus influenzae, has been determined to 1.7-A resolution. The protein has a nucleotide-binding fold with a four-stranded parallel beta-sheet flanked by antiparallel beta-strands on each side. The topology of the beta-sheet is unique among P-loop proteins and has features of different families of enzymes. ADP has been shown to bind to the P-loop in the presence of Mg2+ and ATPase activity has been confirmed by kinetic measurements [].; PDB: 1HTW_A 1FL9_A.
Probab=43.03 E-value=1.1e+02 Score=23.72 Aligned_cols=87 Identities=13% Similarity=0.110 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhCCCcEEEe----ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---CH
Q psy12791 62 RNLERCIASLEEAKHGLCY----SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---KI 133 (393)
Q Consensus 62 ~~lr~~la~~~~~~~~i~~----~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---d~ 133 (393)
.++-+.+++.+...+.|++ ++|=+.+ ..+...+.-.+ .+.+|+|. +.+.-..-+.++.++++- +.
T Consensus 2 ~~la~~l~~~l~~g~vi~L~GdLGaGKTtf~r~l~~~lg~~~--~V~SPTF~-----l~~~Y~~~~~~l~H~DLYRl~~~ 74 (123)
T PF02367_consen 2 IRLAKKLAQILKPGDVILLSGDLGAGKTTFVRGLARALGIDE--EVTSPTFS-----LVNEYEGGNIPLYHFDLYRLEDP 74 (123)
T ss_dssp HHHHHHHHHHHSS-EEEEEEESTTSSHHHHHHHHHHHTT--S------TTTT-----SEEEEEETTEEEEEEE-TT-SST
T ss_pred HHHHHHHHHhCCCCCEEEEECCCCCCHHHHHHHHHHHcCCCC--CcCCCCeE-----EEEEecCCCceEEEeeccccCCH
Confidence 4567788887766566665 6666665 54544443333 77888886 222222345677777663 55
Q ss_pred HHHHhhc-C---CCCcEEEEecCCCC
Q psy12791 134 ENLIKYI-K---PNTKMVWIENPTNP 155 (393)
Q Consensus 134 ~~l~~~l-~---~~~~~v~l~~p~np 155 (393)
+++...- . ....++++++|..-
T Consensus 75 ~e~~~~g~~e~~~~~~i~~IEW~e~~ 100 (123)
T PF02367_consen 75 EELEDLGLEEYLFEDGICVIEWPERL 100 (123)
T ss_dssp HHHHHCTTTTCSSSSEEEEEESGGGG
T ss_pred HHHHHCCchhhhCCCCEEEEECcccc
Confidence 5544421 1 13578888999754
No 438
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=42.91 E-value=1.5e+02 Score=27.66 Aligned_cols=119 Identities=15% Similarity=0.215 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHhCC----CcEEE-eccHHHHH-HH-HHHhcCCCCeE--EEcCCCccchHH--HHHHhcccCCcEEEeeC
Q psy12791 61 RRNLERCIASLEEA----KHGLC-YSSGLGAV-TA-VTHLLSAGDHI--ISGDDVYGGTYR--YFAQVAPKIGLEVDFVD 129 (393)
Q Consensus 61 ~~~lr~~la~~~~~----~~~i~-~~~G~~al-~~-~~~~~~~gd~v--l~~~~~y~~~~~--~~~~~~~~~g~~v~~~~ 129 (393)
..+|++.+.++-.. -++++ +++|-... .+ ++.- .-|..+ +.-++.|.+-.. ...+.++..|+....+.
T Consensus 42 ~~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~-~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~ 120 (343)
T TIGR03573 42 EKELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKK-KLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTIT 120 (343)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHH-HhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEe
Confidence 44677766665432 24555 45555553 22 2211 123333 445556543222 45667788999888776
Q ss_pred CCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCc
Q psy12791 130 LRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLT 185 (393)
Q Consensus 130 ~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~ 185 (393)
.+ .+.+........+ -..+|..+... .....+.++|+++ |+.+|+.....+
T Consensus 121 ~d-~~~~~~l~~~~~~--~~~~pc~~c~~-~~~~~l~~~A~~~-gi~~Il~G~~~d 171 (343)
T TIGR03573 121 IN-PETFRKLQRAYFK--KVGDPEWPQDH-AIFASVYQVALKF-NIPLIIWGENIA 171 (343)
T ss_pred CC-HHHHHHHHHHHHh--ccCCCchhhhh-HHHHHHHHHHHHh-CCCEEEeCCCHH
Confidence 64 3333222211111 11223222221 1256788899999 999998876654
No 439
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=42.61 E-value=2.6e+02 Score=27.19 Aligned_cols=92 Identities=16% Similarity=0.187 Sum_probs=47.5
Q ss_pred hcCCCCeE-EEcCCCcc-chHHHHHHhcccCCcEEEeeCC-CCH-----HHHHhhcCCCCcEEEEecCCCCcccccCHHH
Q psy12791 93 LLSAGDHI-ISGDDVYG-GTYRYFAQVAPKIGLEVDFVDL-RKI-----ENLIKYIKPNTKMVWIENPTNPLMTVFDVKA 164 (393)
Q Consensus 93 ~~~~gd~v-l~~~~~y~-~~~~~~~~~~~~~g~~v~~~~~-~d~-----~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~ 164 (393)
+.+.|.+| ++..-+|. +.+..+...++..++.+..... .|+ +.+..+-..+..+|++.+|....-...-+++
T Consensus 124 l~~~G~kV~lV~~D~~R~aA~eQLk~~a~~~~vp~~~~~~~~dp~~i~~~~l~~~~~~~~DvViIDTaGr~~~d~~lm~E 203 (429)
T TIGR01425 124 YQRKGFKPCLVCADTFRAGAFDQLKQNATKARIPFYGSYTESDPVKIASEGVEKFKKENFDIIIVDTSGRHKQEDSLFEE 203 (429)
T ss_pred HHHCCCCEEEEcCcccchhHHHHHHHHhhccCCeEEeecCCCCHHHHHHHHHHHHHhCCCCEEEEECCCCCcchHHHHHH
Confidence 34556554 44444554 3222233446667777665432 244 2333333346789999877421111112455
Q ss_pred HHHHHHhC-C-CcEEEEeCccC
Q psy12791 165 ISAVVKQH-P-DILLVLDNTFL 184 (393)
Q Consensus 165 l~~l~~~~-~-~~~livDea~~ 184 (393)
+.++.+.. | .+++|+|...+
T Consensus 204 l~~i~~~~~p~e~lLVlda~~G 225 (429)
T TIGR01425 204 MLQVAEAIQPDNIIFVMDGSIG 225 (429)
T ss_pred HHHHhhhcCCcEEEEEeccccC
Confidence 55555443 1 57999997654
No 440
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=42.57 E-value=1.9e+02 Score=23.62 Aligned_cols=42 Identities=21% Similarity=0.201 Sum_probs=27.8
Q ss_pred HHHHHHHHHHhCCCcEEEeccHHHHHHHHHHhcCCCCeEEEc
Q psy12791 62 RNLERCIASLEEAKHGLCYSSGLGAVTAVTHLLSAGDHIISG 103 (393)
Q Consensus 62 ~~lr~~la~~~~~~~~i~~~~G~~al~~~~~~~~~gd~vl~~ 103 (393)
+++.++.++++...+.|++.+|++...++..+....+.-++.
T Consensus 7 ~~IA~~A~~~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvT 48 (161)
T PF00455_consen 7 RAIARKAASLIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVT 48 (161)
T ss_pred HHHHHHHHHhCCCCCEEEEECchHHHHHHHHhhcCCceEEEE
Confidence 445566666777778999999999875555554443333443
No 441
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=42.42 E-value=1.4e+02 Score=26.25 Aligned_cols=46 Identities=9% Similarity=0.063 Sum_probs=22.0
Q ss_pred HHHhcccCCcEEEee-CC-CCHHHHHhhcCCCCcEEEEecCCCCccccc
Q psy12791 114 FAQVAPKIGLEVDFV-DL-RKIENLIKYIKPNTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 114 ~~~~~~~~g~~v~~~-~~-~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 160 (393)
+.+.++..|+++... .. .+.+.++..+.....++++ ..++-||..+
T Consensus 121 ~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~~~~l~m-sv~~~~g~~~ 168 (244)
T PRK13125 121 YVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLSPLFIYY-GLRPATGVPL 168 (244)
T ss_pred HHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCEEEE-EeCCCCCCCc
Confidence 444556666654433 22 2455555555433344444 4455555543
No 442
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=41.97 E-value=2.2e+02 Score=24.23 Aligned_cols=43 Identities=9% Similarity=0.023 Sum_probs=26.8
Q ss_pred HHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeC
Q psy12791 134 ENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDN 181 (393)
Q Consensus 134 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDe 181 (393)
.+++....++--++++++ +|...++.++.+.+++. |+.+|.=-
T Consensus 101 ~ql~~~~~~gDvli~iS~----SG~s~~v~~a~~~Ak~~-G~~vI~IT 143 (196)
T PRK10886 101 KQVRALGHAGDVLLAIST----RGNSRDIVKAVEAAVTR-DMTIVALT 143 (196)
T ss_pred HHHHHcCCCCCEEEEEeC----CCCCHHHHHHHHHHHHC-CCEEEEEe
Confidence 344544544433444433 35566788899999999 88777533
No 443
>TIGR00595 priA primosomal protein N'. All proteins in this family for which functions are known are components of the primosome which is involved in replication, repair, and recombination.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=41.19 E-value=1.5e+02 Score=29.40 Aligned_cols=96 Identities=16% Similarity=0.173 Sum_probs=51.2
Q ss_pred EeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--C---HHHHHhhcCCCCcEEEEec
Q psy12791 79 CYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--K---IENLIKYIKPNTKMVWIEN 151 (393)
Q Consensus 79 ~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--d---~~~l~~~l~~~~~~v~l~~ 151 (393)
.+++|=+++ .++...+..|..+++-.|+-.=+.+.+...-+.+|.++..+... + .+.+.+....+.++|+ .+
T Consensus 5 ~TGsGKT~v~l~~i~~~l~~g~~vLvlvP~i~L~~Q~~~~l~~~f~~~v~vlhs~~~~~er~~~~~~~~~g~~~IVV-GT 83 (505)
T TIGR00595 5 VTGSGKTEVYLQAIEKVLALGKSVLVLVPEIALTPQMIQRFKYRFGSQVAVLHSGLSDSEKLQAWRKVKNGEILVVI-GT 83 (505)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHHHHHHhCCcEEEEECCCCHHHHHHHHHHHHcCCCCEEE-CC
Confidence 357786664 45555667788888888876544444555445566666554322 2 2334443333445443 33
Q ss_pred CCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccc
Q psy12791 152 PTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAY 187 (393)
Q Consensus 152 p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~ 187 (393)
++ ....| .+. =.++|+||.+...+
T Consensus 84 rs---alf~p-------~~~--l~lIIVDEeh~~sy 107 (505)
T TIGR00595 84 RS---ALFLP-------FKN--LGLIIVDEEHDSSY 107 (505)
T ss_pred hH---HHcCc-------ccC--CCEEEEECCCcccc
Confidence 22 11111 122 24899999887644
No 444
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=40.85 E-value=1.2e+02 Score=22.77 Aligned_cols=71 Identities=17% Similarity=0.040 Sum_probs=43.3
Q ss_pred EEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCC
Q psy12791 78 LCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPT 153 (393)
Q Consensus 78 i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~ 153 (393)
++++.|.-+...+..+.+.+..|++-+.... ....++..|..++.-+..|.+.++++=-++.+.+++..++
T Consensus 2 vI~G~g~~~~~i~~~L~~~~~~vvvid~d~~-----~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~ 72 (116)
T PF02254_consen 2 VIIGYGRIGREIAEQLKEGGIDVVVIDRDPE-----RVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTDD 72 (116)
T ss_dssp EEES-SHHHHHHHHHHHHTTSEEEEEESSHH-----HHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSS
T ss_pred EEEcCCHHHHHHHHHHHhCCCEEEEEECCcH-----HHHHHHhcccccccccchhhhHHhhcCccccCEEEEccCC
Confidence 4566665544445555555535555544432 2334556778888888888888888755577888887664
No 445
>KOG1371|consensus
Probab=40.30 E-value=73 Score=29.39 Aligned_cols=67 Identities=19% Similarity=0.193 Sum_probs=43.1
Q ss_pred cEEEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcc----cCCcEEEeeCCCCHHHHHhhcCC
Q psy12791 76 HGLCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAP----KIGLEVDFVDLRKIENLIKYIKP 142 (393)
Q Consensus 76 ~~i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~----~~g~~v~~~~~~d~~~l~~~l~~ 142 (393)
..|++|.|+-=+ .+.+.+++.|+.|++.+.--........+..+ ..++.+...++.|.+.|++..+.
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~ 75 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSE 75 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhh
Confidence 356777776656 67788899999888776533222222333222 24467777788898888887764
No 446
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=39.34 E-value=1.7e+02 Score=25.36 Aligned_cols=77 Identities=13% Similarity=0.158 Sum_probs=39.3
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC--CCCHHHHHhhcCC------CCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD--LRKIENLIKYIKP------NTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~--~~d~~~l~~~l~~------~~~ 145 (393)
..+++++|+..+ .. +..+++.|..|++....-...........+..+.++..++ ..|.+.+.+.++. +.+
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVD 86 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777888777 44 4456777888765321111111112122233454555444 4466666555432 356
Q ss_pred EEEEecC
Q psy12791 146 MVWIENP 152 (393)
Q Consensus 146 ~v~l~~p 152 (393)
.|+.+..
T Consensus 87 ~vi~~ag 93 (247)
T PRK12935 87 ILVNNAG 93 (247)
T ss_pred EEEECCC
Confidence 6665433
No 447
>PTZ00293 thymidine kinase; Provisional
Probab=39.04 E-value=1.1e+02 Score=26.35 Aligned_cols=99 Identities=10% Similarity=0.064 Sum_probs=55.6
Q ss_pred ccH-HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccc
Q psy12791 81 SSG-LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMT 158 (393)
Q Consensus 81 ~~G-~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 158 (393)
.+| +++| ..+......|.++++-.|....-+..-..+..+.|....-+...+..++.+.+ .+..+|.+.=.+.-+
T Consensus 14 fSGKTteLLr~i~~y~~ag~kv~~~kp~~DtR~~~~~~I~Sh~g~~~~a~~v~~~~e~~~~~-~~~dvI~IDEaQFf~-- 90 (211)
T PTZ00293 14 FSGKTTELMRLVKRFTYSEKKCVVIKYSKDTRYSDEQNISSHDKQMLKAIKVSKLKEVLETA-KNYDVIAIDEGQFFP-- 90 (211)
T ss_pred CChHHHHHHHHHHHHHHcCCceEEEEecccccCCCCCcEEecCCCcceeEEcCCHHHHHHhc-cCCCEEEEEchHhhH--
Confidence 456 4445 55555555677777766654431100011233445555545555666666555 357888887777543
Q ss_pred ccCHHHHHHHHHhCCCcEEEEeCccCc
Q psy12791 159 VFDVKAISAVVKQHPDILLVLDNTFLT 185 (393)
Q Consensus 159 ~~~~~~l~~l~~~~~~~~livDea~~~ 185 (393)
++.++.+.+... |+.|++=.--.+
T Consensus 91 --~i~~~~~~l~~~-g~~VivaGLd~D 114 (211)
T PTZ00293 91 --DLVEFSEAAANL-GKIVIVAALDGT 114 (211)
T ss_pred --hHHHHHHHHHHC-CCeEEEEecCcc
Confidence 355666666667 888887654444
No 448
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=38.63 E-value=2.3e+02 Score=27.24 Aligned_cols=88 Identities=14% Similarity=0.216 Sum_probs=54.2
Q ss_pred HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE---EEeeCCCCHHHHHhhcCC-CCcEEEEecCC---CCc----
Q psy12791 88 TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE---VDFVDLRKIENLIKYIKP-NTKMVWIENPT---NPL---- 156 (393)
Q Consensus 88 ~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~---v~~~~~~d~~~l~~~l~~-~~~~v~l~~p~---npt---- 156 (393)
.+...+.+.+ +|++-.-+-+.. .++..++++|+. +..+.-.+++++.+.+.. +++++++.+.+ +|.
T Consensus 112 Qva~~lA~~~-~vLYVsGEES~~--QiklRA~RL~~~~~~l~l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~Sa 188 (456)
T COG1066 112 QVAARLAKRG-KVLYVSGEESLQ--QIKLRADRLGLPTNNLYLLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSA 188 (456)
T ss_pred HHHHHHHhcC-cEEEEeCCcCHH--HHHHHHHHhCCCccceEEehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCC
Confidence 4444556666 676655544432 345556777743 333344588888888865 58999987665 233
Q ss_pred -ccccC----HHHHHHHHHhCCCcEEEE
Q psy12791 157 -MTVFD----VKAISAVVKQHPDILLVL 179 (393)
Q Consensus 157 -G~~~~----~~~l~~l~~~~~~~~liv 179 (393)
|.+-. -.+|.++|++. |+.++.
T Consensus 189 pGsVsQVRe~t~~L~~~AK~~-~i~~fi 215 (456)
T COG1066 189 PGSVSQVREVAAELMRLAKTK-NIAIFI 215 (456)
T ss_pred CCcHHHHHHHHHHHHHHHHHc-CCeEEE
Confidence 44433 45788899998 876544
No 449
>PRK01178 rps24e 30S ribosomal protein S24e; Reviewed
Probab=38.37 E-value=45 Score=24.85 Aligned_cols=24 Identities=17% Similarity=0.387 Sum_probs=19.7
Q ss_pred CCchHHHHHHHHHHHhCCC-cEEEe
Q psy12791 57 NNPTRRNLERCIASLEEAK-HGLCY 80 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~-~~i~~ 80 (393)
++|...+++++||+.++.+ +.|++
T Consensus 29 ~tpsr~eirekLa~~~~~~~~~vvv 53 (99)
T PRK01178 29 ATPSRKDVRKKLAAMLNADKELVVV 53 (99)
T ss_pred CCCCHHHHHHHHHHHHCcCCCEEEE
Confidence 5789999999999999987 44444
No 450
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=37.88 E-value=1.6e+02 Score=21.52 Aligned_cols=64 Identities=16% Similarity=0.134 Sum_probs=40.1
Q ss_pred HHHHhcccCCcEEEee--CCC---CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeC
Q psy12791 113 YFAQVAPKIGLEVDFV--DLR---KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDN 181 (393)
Q Consensus 113 ~~~~~~~~~g~~v~~~--~~~---d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDe 181 (393)
.|...++.+|.+.... +-. ....+++.+. ++.+|++..-..... -...+.+.|+++ +++++.=.
T Consensus 14 ~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~-~aD~VIv~t~~vsH~---~~~~vk~~akk~-~ip~~~~~ 82 (97)
T PF10087_consen 14 RYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIK-KADLVIVFTDYVSHN---AMWKVKKAAKKY-GIPIIYSR 82 (97)
T ss_pred HHHHHHHHcCCEEEEEecCCCCccchhHHHHhcC-CCCEEEEEeCCcChH---HHHHHHHHHHHc-CCcEEEEC
Confidence 5788889999999888 211 2234666664 467766632221111 256788899999 88776544
No 451
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=37.48 E-value=1.3e+02 Score=23.79 Aligned_cols=59 Identities=14% Similarity=0.209 Sum_probs=42.1
Q ss_pred HHHHHhcccCCcEEEeeCCC-CHHHHHhh-cCCCCcEEEEecCCCCcccccCHHHHHHHHHhC
Q psy12791 112 RYFAQVAPKIGLEVDFVDLR-KIENLIKY-IKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 112 ~~~~~~~~~~g~~v~~~~~~-d~~~l~~~-l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 172 (393)
+....+++..|.+|+.+..+ .++++.++ .+.++.+|.++.-+. .....++++.+.+++.
T Consensus 19 ~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~--~~~~~~~~~~~~l~~~ 79 (134)
T TIGR01501 19 KILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYG--HGEIDCKGLRQKCDEA 79 (134)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccc--cCHHHHHHHHHHHHHC
Confidence 45667788999999999876 56665554 455788998877662 2233478888888876
No 452
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=36.55 E-value=2.5e+02 Score=24.49 Aligned_cols=72 Identities=21% Similarity=0.147 Sum_probs=37.1
Q ss_pred HHHHHhCCC-cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEE--EeeCCCCHHHHHhhc
Q psy12791 67 CIASLEEAK-HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEV--DFVDLRKIENLIKYI 140 (393)
Q Consensus 67 ~la~~~~~~-~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v--~~~~~~d~~~l~~~l 140 (393)
.++.++... ..+++++|+..+ .. ...+++.|-.|++.... .. ...........+.++ ...+..|.+++.+.+
T Consensus 6 ~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 82 (258)
T PRK06935 6 FSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TN-WDETRRLIEKEGRKVTFVQVDLTKPESAEKVV 82 (258)
T ss_pred hccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 333444433 567777777777 44 45567788777665433 21 112222223334344 444555666655544
No 453
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=36.52 E-value=1.4e+02 Score=23.90 Aligned_cols=72 Identities=10% Similarity=0.079 Sum_probs=49.6
Q ss_pred eEEEcCCCc---cchHHHHHHhcccCCcEEEeeCCC-CHH-HHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC
Q psy12791 99 HIISGDDVY---GGTYRYFAQVAPKIGLEVDFVDLR-KIE-NLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 99 ~vl~~~~~y---~~~~~~~~~~~~~~g~~v~~~~~~-d~~-~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 172 (393)
+|++..+.. ........++++..|++|+..... .++ .+.++++++..+|.+|.-+ -|.....+++.+.+++.
T Consensus 14 rvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~tp~e~v~aA~~~dv~vIgvSsl~--g~h~~l~~~lve~lre~ 90 (143)
T COG2185 14 RVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQTPEEAVRAAVEEDVDVIGVSSLD--GGHLTLVPGLVEALREA 90 (143)
T ss_pred eEEEeccCccccccchHHHHHHHHhCCceEEecCCcCCHHHHHHHHHhcCCCEEEEEecc--chHHHHHHHHHHHHHHh
Confidence 566666543 222334667788899999998775 444 4555667788888887766 13344588999999997
No 454
>PRK08329 threonine synthase; Validated
Probab=36.38 E-value=2.5e+02 Score=26.31 Aligned_cols=56 Identities=20% Similarity=0.176 Sum_probs=32.1
Q ss_pred hCCCcEEEeccHHHHH-HHH-HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 72 EEAKHGLCYSSGLGAV-TAV-THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 72 ~~~~~~i~~~~G~~al-~~~-~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
.|....+..++|.++. .+. .+...-.=.|++|...-. .-....+.+|++++.++-+
T Consensus 102 ~g~~~vv~aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~----~k~~~~~~~GA~v~~v~~~ 159 (347)
T PRK08329 102 EGINEVVIDSSGNAALSLALYSLSEGIKVHVFVSYNASK----EKISLLSRLGAELHFVEGD 159 (347)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHcCCcEEEEECCCChH----HHHHHHHHcCCEEEEECCC
Confidence 3555566677787775 333 233322234555543222 2445568899999999754
No 455
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=35.60 E-value=1.2e+02 Score=22.45 Aligned_cols=49 Identities=6% Similarity=0.050 Sum_probs=32.0
Q ss_pred EEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEE
Q psy12791 124 EVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVL 179 (393)
Q Consensus 124 ~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~liv 179 (393)
.++.++.+..+-+..++..+.+.++++ |...+-+++.++|++. +++++.
T Consensus 42 ~lvIt~gdR~di~~~a~~~~i~~iIlt------g~~~~~~~v~~la~~~-~i~vi~ 90 (105)
T PF07085_consen 42 DLVITPGDREDIQLAAIEAGIACIILT------GGLEPSEEVLELAKEL-GIPVIS 90 (105)
T ss_dssp EEEEEETT-HHHHHHHCCTTECEEEEE------TT----HHHHHHHHHH-T-EEEE
T ss_pred eEEEEeCCcHHHHHHHHHhCCCEEEEe------CCCCCCHHHHHHHHHC-CCEEEE
Confidence 455555566777777777778888876 4555678999999999 887765
No 456
>PLN02970 serine racemase
Probab=34.70 E-value=1.4e+02 Score=27.75 Aligned_cols=52 Identities=15% Similarity=0.084 Sum_probs=32.0
Q ss_pred cEEEeccHHHHH-HHHH-HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 76 HGLCYSSGLGAV-TAVT-HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~~-~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
..+..++|..++ .+.. ..+.-.=.|++++.+.. .-....+.+|++++.++.+
T Consensus 77 ~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~----~k~~~~~~~GA~Vi~~~~~ 130 (328)
T PLN02970 77 GVVTHSSGNHAAALALAAKLRGIPAYIVVPKNAPA----CKVDAVIRYGGIITWCEPT 130 (328)
T ss_pred eEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCH----HHHHHHHhcCCEEEEeCCC
Confidence 466678888876 4333 33333335666655443 2344568899999999864
No 457
>PRK07102 short chain dehydrogenase; Provisional
Probab=34.69 E-value=2.4e+02 Score=24.32 Aligned_cols=73 Identities=10% Similarity=0.124 Sum_probs=36.6
Q ss_pred EEEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEE--eeCCCCHHHHHhhcC---CCCcEEEE
Q psy12791 77 GLCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVD--FVDLRKIENLIKYIK---PNTKMVWI 149 (393)
Q Consensus 77 ~i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~--~~~~~d~~~l~~~l~---~~~~~v~l 149 (393)
.++++.|+..+ .+...+++.|-.|++....-..............+.++. ..+..|.+++.+.++ .+...++.
T Consensus 3 ~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv~ 82 (243)
T PRK07102 3 KILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVLI 82 (243)
T ss_pred EEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEEE
Confidence 46777777777 444567777877776554332211111222222233444 444456666655543 23455553
No 458
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=34.07 E-value=1.4e+02 Score=23.50 Aligned_cols=72 Identities=19% Similarity=0.270 Sum_probs=46.4
Q ss_pred ccchHHHHHHhcccCCcEEEeeCCC-CHHHH-HhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC--CCcEEEEe
Q psy12791 107 YGGTYRYFAQVAPKIGLEVDFVDLR-KIENL-IKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH--PDILLVLD 180 (393)
Q Consensus 107 y~~~~~~~~~~~~~~g~~v~~~~~~-d~~~l-~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~--~~~~livD 180 (393)
|...-+.....++..|.+|+....+ +++++ +++.+.++.+|.++.-... ...-.+++.+..++. +++.+++=
T Consensus 15 Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~~~--~~~~~~~~~~~L~~~g~~~i~vivG 90 (132)
T TIGR00640 15 HDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLAGG--HLTLVPALRKELDKLGRPDILVVVG 90 (132)
T ss_pred cHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCchhh--hHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 4333345667788899999998775 55554 5556667889998776622 222367777777765 13455553
No 459
>PRK05993 short chain dehydrogenase; Provisional
Probab=33.82 E-value=3.4e+02 Score=24.07 Aligned_cols=60 Identities=15% Similarity=0.118 Sum_probs=34.7
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhc
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYI 140 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l 140 (393)
..+++|+|+..+ . ++..+.+.|..|++....-. .... +...+++....++.|.+++++.+
T Consensus 5 k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~----~~~~-l~~~~~~~~~~Dl~d~~~~~~~~ 66 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDGWRVFATCRKEE----DVAA-LEAEGLEAFQLDYAEPESIAALV 66 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH----HHHH-HHHCCceEEEccCCCHHHHHHHH
Confidence 356777777777 4 44556778888876543221 1222 22346677777777766655544
No 460
>PF04371 PAD_porph: Porphyromonas-type peptidyl-arginine deiminase; InterPro: IPR007466 Peptidyl-arginine deiminase (PAD) enzymes catalyse the deimination of the guanidino group from carboxy-terminal arginine residues of various peptides to produce ammonia. PAD from Porphyromonas gingivalis (Bacteroides gingivalis) (PPAD) appears to be evolutionarily unrelated to mammalian PAD (IPR004303 from INTERPRO), which is a metalloenzyme. PPAD is thought to belong to the same superfamily as aminotransferase and arginine deiminase, and to form an alpha/beta propeller structure. This family has previously been named PPADH (Porphyromonas peptidyl-arginine deiminase homologs) []. The predicted catalytic residues in PPAD (Q9RQJ2 from SWISSPROT) are Asp130, Asp187, His236, Asp238 and Cys351 []. These are absolutely conserved with the exception of Asp187 which is absent in two family members. PPAD is also able to catalyse the deimination of free L-arginine, but has primarily peptidyl-arginine specificity. It may have a FMN cofactor [].; PDB: 2Q3U_A 1VKP_A 3H7C_X 3H7K_A 2EWO_K 1ZBR_B 1XKN_A 2JER_B 3HVM_A 2CMU_A.
Probab=33.75 E-value=60 Score=30.19 Aligned_cols=122 Identities=13% Similarity=0.203 Sum_probs=62.1
Q ss_pred cCCCCchHHHHHHHHHHHhCCCcEEEeccH------HHH-HHHHHHhcCCCCeEEEcC---CCccchHHH---HHHhccc
Q psy12791 54 SRSNNPTRRNLERCIASLEEAKHGLCYSSG------LGA-VTAVTHLLSAGDHIISGD---DVYGGTYRY---FAQVAPK 120 (393)
Q Consensus 54 ~~~~~~~~~~lr~~la~~~~~~~~i~~~~G------~~a-l~~~~~~~~~gd~vl~~~---~~y~~~~~~---~~~~~~~ 120 (393)
.|.|.-...++++.|.+.+|++..|.+..| +.. +-.+..++.+| +|++.. +..+ .+.. ..+.++.
T Consensus 161 nRNp~~s~~eie~~L~~~lG~~kviwL~~g~~~~d~t~GHiD~~arFv~~~-~vl~~~~~d~~d~-~~~~~~~~~~~L~~ 238 (329)
T PF04371_consen 161 NRNPGLSKAEIEAELKRYLGVEKVIWLPHGLLGDDDTDGHIDGIARFVDPG-TVLVSRCDDPSDP-NYERLEENLEILSA 238 (329)
T ss_dssp TTSTTS-HHHHHHHHHHHHT-SEEEEESS-STTTTTTSS-GGGTEEEEETT-EEEEEE-S-TTST-THHHHHHHHHHHHT
T ss_pred ccCccCCHHHHHHHHHHHhCCCEEEEecCCcCCCCCcCCccceeEEecCCC-EEEEEecCCCCCc-CHHHHHHHHHHHHh
Confidence 455666788999999999999999999876 222 24456677877 555532 2221 1111 2222332
Q ss_pred ----CC--cEEEeeCCCC-HH-----HHHh-hcCC--CCcEEEEecCCCCcccccCHHHHHHHHHhCCC-cEEEEeC
Q psy12791 121 ----IG--LEVDFVDLRK-IE-----NLIK-YIKP--NTKMVWIENPTNPLMTVFDVKAISAVVKQHPD-ILLVLDN 181 (393)
Q Consensus 121 ----~g--~~v~~~~~~d-~~-----~l~~-~l~~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~-~~livDe 181 (393)
.| .+++.+|..+ .. .+.. .++- -.++|++..-.. ..|..++..+.+.+|+ -++-+|.
T Consensus 239 ~~da~G~~~~i~~lp~p~~~~~~~~~~~~~sY~Nfli~n~~VivP~fg~----~~D~~Al~~l~~~fP~r~Vv~i~~ 311 (329)
T PF04371_consen 239 ATDADGRPFEIVELPLPDPPYDEDGERLPASYVNFLITNGAVIVPVFGD----PADEAALEILQEAFPDRKVVGIDA 311 (329)
T ss_dssp -B-TTSSB-EEEEEEB-SS-BETTTEEE--BTT--EEETTEEEEEE-SS----TTHHHHHHHHHHHSTTSEEEEEET
T ss_pred hhccCCCeeEEEEecCCCcccccCCcCccceeeeeEEECCEEEEccCCC----hHHHHHHHHHHHHCCCCEEEEEeH
Confidence 23 7888877653 00 0000 0000 024566654433 3566677777776654 3444454
No 461
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=33.41 E-value=2.5e+02 Score=24.97 Aligned_cols=10 Identities=20% Similarity=0.541 Sum_probs=5.0
Q ss_pred CcEEEEecCC
Q psy12791 144 TKMVWIENPT 153 (393)
Q Consensus 144 ~~~v~l~~p~ 153 (393)
.+.+++.+|+
T Consensus 141 l~~i~lv~P~ 150 (256)
T TIGR00262 141 VKPIFLVAPN 150 (256)
T ss_pred CcEEEEECCC
Confidence 4445555554
No 462
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=33.40 E-value=1.5e+02 Score=25.66 Aligned_cols=76 Identities=9% Similarity=0.052 Sum_probs=38.3
Q ss_pred cEEEeccHHHHH--HHHHHhcCCCCeEEEc-CCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcCC------CC
Q psy12791 76 HGLCYSSGLGAV--TAVTHLLSAGDHIISG-DDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIKP------NT 144 (393)
Q Consensus 76 ~~i~~~~G~~al--~~~~~~~~~gd~vl~~-~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~~------~~ 144 (393)
..+++++|+..+ .++..+++.|..|++. ... ...........+..+.++..+ +..|.+++.+.+++ +.
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARS-RKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL 83 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 357777777777 4455677778776642 111 111111112223345555554 44466666555432 35
Q ss_pred cEEEEecC
Q psy12791 145 KMVWIENP 152 (393)
Q Consensus 145 ~~v~l~~p 152 (393)
.+++.+..
T Consensus 84 d~vi~~ag 91 (250)
T PRK08063 84 DVFVNNAA 91 (250)
T ss_pred CEEEECCC
Confidence 66665443
No 463
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=33.38 E-value=2.4e+02 Score=25.35 Aligned_cols=98 Identities=12% Similarity=0.148 Sum_probs=48.5
Q ss_pred EEEeccH-HHHH-HHHHHhcCCCC--eEEEc--CCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEE-
Q psy12791 77 GLCYSSG-LGAV-TAVTHLLSAGD--HIISG--DDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWI- 149 (393)
Q Consensus 77 ~i~~~~G-~~al-~~~~~~~~~gd--~vl~~--~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l- 149 (393)
..++|-| +..+ ..+....+.|. +|++. .|.+.+ . .+...+...|+++..++...+..+.+. ++..|++
T Consensus 109 ~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG-~-~~a~~L~~~gi~v~~i~d~~~~~~m~~---~vd~VliG 183 (282)
T PF01008_consen 109 DTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEG-R-LMAKELAEAGIPVTLIPDSAVGYVMPR---DVDKVLIG 183 (282)
T ss_dssp EEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHH-H-THHHHHHHTT-EEEEE-GGGHHHHHHC---TESEEEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhh-h-hHHHHhhhcceeEEEEechHHHHHHHH---hCCeeEEe
Confidence 3444444 4445 55554444443 34443 344443 2 233445667999999885444444333 2455555
Q ss_pred ecCCCCcccccC---HHHHHHHHHhCCCcEEEEe
Q psy12791 150 ENPTNPLMTVFD---VKAISAVVKQHPDILLVLD 180 (393)
Q Consensus 150 ~~p~nptG~~~~---~~~l~~l~~~~~~~~livD 180 (393)
...--+.|.+.. -..++-.|+.+ ++++++=
T Consensus 184 ad~v~~nG~v~nk~Gt~~~a~~Ak~~-~vPv~v~ 216 (282)
T PF01008_consen 184 ADAVLANGGVVNKVGTLQLALAAKEF-NVPVYVL 216 (282)
T ss_dssp -SEEETTS-EEEETTHHHHHHHHHHT-T-EEEEE
T ss_pred eeEEecCCCEeehhhHHHHHHHHHhh-CCCEEEE
Confidence 222234454443 56677788889 8876654
No 464
>PRK12937 short chain dehydrogenase; Provisional
Probab=33.35 E-value=2.4e+02 Score=24.23 Aligned_cols=76 Identities=8% Similarity=0.026 Sum_probs=38.0
Q ss_pred cEEEeccHHHHH-HHH-HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcCC------CCc
Q psy12791 76 HGLCYSSGLGAV-TAV-THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIKP------NTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~-~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~~------~~~ 145 (393)
..+++++|+..+ ..+ ..+++.|-++++..-.-..........+...+.++..+ +..|.+++.+.++. +..
T Consensus 6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 85 (245)
T PRK12937 6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRID 85 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788887777 444 45667776665432111111111222223345455544 44466666665542 456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++.+.
T Consensus 86 ~vi~~a 91 (245)
T PRK12937 86 VLVNNA 91 (245)
T ss_pred EEEECC
Confidence 666543
No 465
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=33.09 E-value=1.7e+02 Score=23.21 Aligned_cols=59 Identities=10% Similarity=0.187 Sum_probs=39.0
Q ss_pred HHHHHhcccCCcEEEeeCCC-CHHHHHhhc-CCCCcEEEEecCCCCcccccCHHHHHHHHHhC
Q psy12791 112 RYFAQVAPKIGLEVDFVDLR-KIENLIKYI-KPNTKMVWIENPTNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 112 ~~~~~~~~~~g~~v~~~~~~-d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 172 (393)
......++..|.+++++-.+ .++++.+++ +.++.+|.++..++. .....+++.+.+++.
T Consensus 21 ~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~--~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 21 KILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGH--GEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCcccc--CHHHHHHHHHHHHhc
Confidence 34556678899999998775 566666655 446888888766643 223356666666664
No 466
>PRK12743 oxidoreductase; Provisional
Probab=33.05 E-value=2.4e+02 Score=24.61 Aligned_cols=73 Identities=11% Similarity=0.061 Sum_probs=37.9
Q ss_pred EEEeccHHHHH--HHHHHhcCCCCeEEEc-CCCccchHHHHHHhcccCCcEEE--eeCCCCHHHHHhhcC------CCCc
Q psy12791 77 GLCYSSGLGAV--TAVTHLLSAGDHIISG-DDVYGGTYRYFAQVAPKIGLEVD--FVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 77 ~i~~~~G~~al--~~~~~~~~~gd~vl~~-~~~y~~~~~~~~~~~~~~g~~v~--~~~~~d~~~l~~~l~------~~~~ 145 (393)
.+++++|+..| .++..+++.|-+|++. ...-... .......+..|.++. ..++.|.+.+++.+. .+..
T Consensus 4 ~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12743 4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGA-KETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRID 82 (256)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHH-HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 56777777777 4455677888887654 2222111 112222233454444 445557666555443 1345
Q ss_pred EEEEe
Q psy12791 146 MVWIE 150 (393)
Q Consensus 146 ~v~l~ 150 (393)
.++.+
T Consensus 83 ~li~~ 87 (256)
T PRK12743 83 VLVNN 87 (256)
T ss_pred EEEEC
Confidence 66554
No 467
>PRK05638 threonine synthase; Validated
Probab=32.96 E-value=3.1e+02 Score=26.65 Aligned_cols=55 Identities=13% Similarity=-0.063 Sum_probs=31.6
Q ss_pred CCCcEEEeccHHHHH-HHHH-HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 73 EAKHGLCYSSGLGAV-TAVT-HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 73 ~~~~~i~~~~G~~al-~~~~-~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
+....+.-++|.++. .+.. +...-.=.|++|...-. ......+.+|++++.++-+
T Consensus 111 g~~~vv~aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~----~k~~~~~~~GA~vi~v~~~ 167 (442)
T PRK05638 111 AANGFIVASDGNAAASVAAYSARAGKEAFVVVPRKVDK----GKLIQMIAFGAKIIRYGES 167 (442)
T ss_pred CCCEEEEeCCChHHHHHHHHHHHcCCCEEEEEeCCCCH----HHHHHHHhcCcEEEEECCC
Confidence 444566677887775 3333 33322224555543322 3455678899999999753
No 468
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=32.77 E-value=4e+02 Score=24.61 Aligned_cols=124 Identities=17% Similarity=0.232 Sum_probs=60.9
Q ss_pred hHHHHHHHHHHHhCC-----------CcEEEe----ccHHHH-HHHHH-HhcCCCCeEE-EcCCCccc-hHHHHHHhccc
Q psy12791 60 TRRNLERCIASLEEA-----------KHGLCY----SSGLGA-VTAVT-HLLSAGDHII-SGDDVYGG-TYRYFAQVAPK 120 (393)
Q Consensus 60 ~~~~lr~~la~~~~~-----------~~~i~~----~~G~~a-l~~~~-~~~~~gd~vl-~~~~~y~~-~~~~~~~~~~~ 120 (393)
....+++.+.+.++. +..+.+ ++|=+- +..+. .+...|.+|. +....|.. ....+...+..
T Consensus 88 ~~~~l~~~l~~~l~~~~~~~~~~~~~~~vi~lvGpnGsGKTTt~~kLA~~l~~~g~~V~Li~~D~~r~~a~eql~~~a~~ 167 (318)
T PRK10416 88 LKELLKEELAEILEPVEKPLNIEEKKPFVILVVGVNGVGKTTTIGKLAHKYKAQGKKVLLAAGDTFRAAAIEQLQVWGER 167 (318)
T ss_pred HHHHHHHHHHHHhCcCCccccccCCCCeEEEEECCCCCcHHHHHHHHHHHHHhcCCeEEEEecCccchhhHHHHHHHHHH
Confidence 345677777777651 122222 334222 32222 2334455554 44444532 11123333556
Q ss_pred CCcEEEeeCCC-CH-----HHHHhhcCCCCcEEEEecCC-CCccc--ccCHHHHHHHHHh------CCCcEEEEeCccC
Q psy12791 121 IGLEVDFVDLR-KI-----ENLIKYIKPNTKMVWIENPT-NPLMT--VFDVKAISAVVKQ------HPDILLVLDNTFL 184 (393)
Q Consensus 121 ~g~~v~~~~~~-d~-----~~l~~~l~~~~~~v~l~~p~-nptG~--~~~~~~l~~l~~~------~~~~~livDea~~ 184 (393)
.|+.++..+.. |+ +.+......+...|++.+|. +++-. +-.++++.++++. + +.++|+|.+..
T Consensus 168 ~~i~~~~~~~~~dpa~~v~~~l~~~~~~~~D~ViIDTaGr~~~~~~l~~eL~~~~~v~~~~~~~~p~-~~~LVl~a~~g 245 (318)
T PRK10416 168 VGVPVIAQKEGADPASVAFDAIQAAKARGIDVLIIDTAGRLHNKTNLMEELKKIKRVIKKADPDAPH-EVLLVLDATTG 245 (318)
T ss_pred cCceEEEeCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHHhhhcCCCCc-eEEEEEECCCC
Confidence 67776655332 33 33444445667899997664 23211 1124455554432 3 57899998854
No 469
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=32.54 E-value=4.3e+02 Score=25.55 Aligned_cols=91 Identities=18% Similarity=0.198 Sum_probs=49.9
Q ss_pred HhcCCCCeEE-EcCCCcc-chHHHHHHhcccCCcEEEeeCCCCHHHHHhhc---CC--CCcEEEEecCCCCcccccCHHH
Q psy12791 92 HLLSAGDHII-SGDDVYG-GTYRYFAQVAPKIGLEVDFVDLRKIENLIKYI---KP--NTKMVWIENPTNPLMTVFDVKA 164 (393)
Q Consensus 92 ~~~~~gd~vl-~~~~~y~-~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l---~~--~~~~v~l~~p~nptG~~~~~~~ 164 (393)
.+...|.+|. +..-+|. +....+...+...|+.+.... +.+++.+.+ .. +..+|++..+....-....+++
T Consensus 264 ~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~~--d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~~lm~E 341 (436)
T PRK11889 264 QFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAVR--DEAAMTRALTYFKEEARVDYILIDTAGKNYRASETVEE 341 (436)
T ss_pred HHHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEecC--CHHHHHHHHHHHHhccCCCEEEEeCccccCcCHHHHHH
Confidence 3445565554 3333442 333345555667777766543 555555554 22 4689999766432222223666
Q ss_pred HHHHHHhC-C-CcEEEEeCccC
Q psy12791 165 ISAVVKQH-P-DILLVLDNTFL 184 (393)
Q Consensus 165 l~~l~~~~-~-~~~livDea~~ 184 (393)
+.++.+.. | .+++++|.+..
T Consensus 342 L~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 342 MIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred HHHHHhhcCCCeEEEEECCccC
Confidence 66666542 2 57788888654
No 470
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=32.53 E-value=2.9e+02 Score=24.66 Aligned_cols=55 Identities=16% Similarity=0.265 Sum_probs=29.7
Q ss_pred HHHhcccCCcEEEeeCC---CCHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCC
Q psy12791 114 FAQVAPKIGLEVDFVDL---RKIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPD 174 (393)
Q Consensus 114 ~~~~~~~~g~~v~~~~~---~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 174 (393)
+-..++..|+.-+.+|- +..+++.+.+.+ +...|+++.|+.| .+++..+++..++
T Consensus 109 f~~~~~~aGvdGviipDLp~ee~~~~~~~~~~~gl~~I~lvap~t~------~eri~~i~~~s~g 167 (258)
T PRK13111 109 FAADAAEAGVDGLIIPDLPPEEAEELRAAAKKHGLDLIFLVAPTTT------DERLKKIASHASG 167 (258)
T ss_pred HHHHHHHcCCcEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC------HHHHHHHHHhCCC
Confidence 44456666776555542 123334444433 4677787888743 3556666665524
No 471
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=32.41 E-value=1.7e+02 Score=26.56 Aligned_cols=52 Identities=19% Similarity=0.112 Sum_probs=28.9
Q ss_pred cEEEeccHHHHH-HHHH-HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 76 HGLCYSSGLGAV-TAVT-HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~~-~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
..+..++|.++. .+.. +...-.=.++++.-. +. .-....+.+|.+++.++.+
T Consensus 67 ~iv~~ssGN~g~alA~~a~~~G~~~~ivvp~~~-~~---~k~~~l~~~Ga~vi~~~~~ 120 (304)
T cd01562 67 GVVAASAGNHAQGVAYAAKLLGIPATIVMPETA-PA---AKVDATRAYGAEVVLYGED 120 (304)
T ss_pred cEEEECCCHHHHHHHHHHHHcCCCEEEEECCCC-CH---HHHHHHHHcCCEEEEeCCC
Confidence 355567776665 3332 332222234444333 22 3455678999999999864
No 472
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=32.40 E-value=3.2e+02 Score=26.09 Aligned_cols=104 Identities=21% Similarity=0.193 Sum_probs=61.4
Q ss_pred cEEEeccHHHHHHHHHHhcCCC-CeEEEcCCCccchHHHHHHhcccC--CcEEEeeCCCCHHHHHhhcCCCCcEEEEecC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAG-DHIISGDDVYGGTYRYFAQVAPKI--GLEVDFVDLRKIENLIKYIKPNTKMVWIENP 152 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~g-d~vl~~~~~y~~~~~~~~~~~~~~--g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p 152 (393)
..++++.|.-+-.++..+.+.| ..|.+.+-+... ..++.... .++...++..|.+.+.+.|++. .+|+-+-|
T Consensus 3 ~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~----~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~-d~VIn~~p 77 (389)
T COG1748 3 KILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEK----CARIAELIGGKVEALQVDAADVDALVALIKDF-DLVINAAP 77 (389)
T ss_pred cEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHH----HHHHHhhccccceeEEecccChHHHHHHHhcC-CEEEEeCC
Confidence 4677888766543444444555 467776655442 34443333 4677777777999999988764 77776666
Q ss_pred CCCccccc------------------CHHHHHHHHHhCCCcEEEEeCccCc
Q psy12791 153 TNPLMTVF------------------DVKAISAVVKQHPDILLVLDNTFLT 185 (393)
Q Consensus 153 ~nptG~~~------------------~~~~l~~l~~~~~~~~livDea~~~ 185 (393)
..-+-.++ +.-++.+.|++. |+..|.+.=+..
T Consensus 78 ~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~A-git~v~~~G~dP 127 (389)
T COG1748 78 PFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKA-GITAVLGCGFDP 127 (389)
T ss_pred chhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHc-CeEEEcccCcCc
Confidence 53322222 123455666666 666666665444
No 473
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=32.30 E-value=99 Score=28.04 Aligned_cols=78 Identities=13% Similarity=0.192 Sum_probs=39.0
Q ss_pred CeE-EEcCCCccc---hHHHHHHhcccCCcEEEeeCCCC---HHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHH
Q psy12791 98 DHI-ISGDDVYGG---TYRYFAQVAPKIGLEVDFVDLRK---IENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVK 170 (393)
Q Consensus 98 d~v-l~~~~~y~~---~~~~~~~~~~~~g~~v~~~~~~d---~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~ 170 (393)
++| ++.++.... ....+...++..|++++.++..+ ++...+.+.++..++++...+ ...-....+...+.
T Consensus 132 k~igvl~~~~~~~~~~~~~~~~~~a~~~g~~l~~~~v~~~~~~~~~~~~l~~~~da~~~~~~~---~~~~~~~~i~~~~~ 208 (294)
T PF04392_consen 132 KRIGVLYDPSEPNSVAQIEQLRKAAKKLGIELVEIPVPSSEDLEQALEALAEKVDALYLLPDN---LVDSNFEAILQLAN 208 (294)
T ss_dssp -EEEEEEETT-HHHHHHHHHHHHHHHHTT-EEEEEEESSGGGHHHHHHHHCTT-SEEEE-S-H---HHHHTHHHHHHHCC
T ss_pred CEEEEEecCCCccHHHHHHHHHHHHHHcCCEEEEEecCcHhHHHHHHHHhhccCCEEEEECCc---chHhHHHHHHHHHH
Confidence 555 555665542 23345566777899988777664 444444455667777774222 11123445666666
Q ss_pred hCCCcEEEE
Q psy12791 171 QHPDILLVL 179 (393)
Q Consensus 171 ~~~~~~liv 179 (393)
++ +++++.
T Consensus 209 ~~-~iPv~~ 216 (294)
T PF04392_consen 209 EA-KIPVFG 216 (294)
T ss_dssp CT-T--EEE
T ss_pred hc-CCCEEE
Confidence 65 565543
No 474
>PRK06194 hypothetical protein; Provisional
Probab=31.47 E-value=2.7e+02 Score=24.75 Aligned_cols=77 Identities=9% Similarity=0.001 Sum_probs=40.6
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcCC------CCc
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIKP------NTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~~------~~~ 145 (393)
..+++|+|+..| . +...+++.|.+|++.+..-.. ...........+.++..+ +..|.+++++.+.. +..
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id 85 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDA-LDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH 85 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 457788888777 4 445567778887765532211 111111122235555444 55577776665532 356
Q ss_pred EEEEecCC
Q psy12791 146 MVWIENPT 153 (393)
Q Consensus 146 ~v~l~~p~ 153 (393)
+|+-+...
T Consensus 86 ~vi~~Ag~ 93 (287)
T PRK06194 86 LLFNNAGV 93 (287)
T ss_pred EEEECCCC
Confidence 66554433
No 475
>KOG2865|consensus
Probab=31.44 E-value=2.5e+02 Score=25.67 Aligned_cols=95 Identities=13% Similarity=0.114 Sum_probs=59.8
Q ss_pred cEEEeccHHHH-H--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCC--CCHHHHHhhcCCCCcEEE
Q psy12791 76 HGLCYSSGLGA-V--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDL--RKIENLIKYIKPNTKMVW 148 (393)
Q Consensus 76 ~~i~~~~G~~a-l--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~--~d~~~l~~~l~~~~~~v~ 148 (393)
..+.+.=|++. + ..+..+.+-|..|++|--+=.. .....+..| .++.+.+. .|.+.+.+++....-+|=
T Consensus 61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~----~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVIN 136 (391)
T KOG2865|consen 61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEY----DPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVIN 136 (391)
T ss_pred ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCcc----chhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEE
Confidence 35666677777 4 6667788889999998543221 122244444 25555554 488999888865434444
Q ss_pred EecCCCCccccc--C-----HHHHHHHHHhCCCc
Q psy12791 149 IENPTNPLMTVF--D-----VKAISAVVKQHPDI 175 (393)
Q Consensus 149 l~~p~nptG~~~--~-----~~~l~~l~~~~~~~ 175 (393)
+..-..+|+..- | .++|+.+|++. |+
T Consensus 137 LIGrd~eTknf~f~Dvn~~~aerlAricke~-GV 169 (391)
T KOG2865|consen 137 LIGRDYETKNFSFEDVNVHIAERLARICKEA-GV 169 (391)
T ss_pred eeccccccCCcccccccchHHHHHHHHHHhh-Ch
Confidence 444455665433 1 78899999997 65
No 476
>KOG0352|consensus
Probab=31.19 E-value=2.6e+02 Score=27.05 Aligned_cols=80 Identities=20% Similarity=0.257 Sum_probs=41.1
Q ss_pred CCCCcEEEEecCCCCcccccC-HHHHHHHHHhC-CCcEEEEeCccCcccccCCCCCcCc-EEEEcc-cccccCCCCceEE
Q psy12791 141 KPNTKMVWIENPTNPLMTVFD-VKAISAVVKQH-PDILLVLDNTFLTAYYQKSLPWGVD-IVLYSL-TKYMNGHSDVVMG 216 (393)
Q Consensus 141 ~~~~~~v~l~~p~nptG~~~~-~~~l~~l~~~~-~~~~livDea~~~~~~~~~~~~~~d-i~~~S~-sK~~~G~~G~r~G 216 (393)
.++++.+||+.-. ...+ .+.+..-..++ .=.+++|||++...-+ .-++..| +-++++ ||+- +.|= +.
T Consensus 111 kp~~K~LYITPE~----AAt~~FQ~lLn~L~~r~~L~Y~vVDEAHCVSQW--GHDFRPDYL~LG~LRS~~~-~vpw--vA 181 (641)
T KOG0352|consen 111 KPTIKMLYITPEG----AATDGFQKLLNGLANRDVLRYIVVDEAHCVSQW--GHDFRPDYLTLGSLRSVCP-GVPW--VA 181 (641)
T ss_pred CCceeEEEEchhh----hhhhhHHHHHHHHhhhceeeeEEechhhhHhhh--ccccCcchhhhhhHHhhCC-CCce--EE
Confidence 3567888885433 3333 45555444444 2358999999985433 2233344 344555 4443 4442 33
Q ss_pred EEEecChHHHHHH
Q psy12791 217 ATVTNDDSLQARL 229 (393)
Q Consensus 217 ~~~~~~~~~~~~~ 229 (393)
...+.++++.+.+
T Consensus 182 LTATA~~~VqEDi 194 (641)
T KOG0352|consen 182 LTATANAKVQEDI 194 (641)
T ss_pred eecccChhHHHHH
Confidence 3333345555554
No 477
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=31.09 E-value=3.3e+02 Score=27.82 Aligned_cols=94 Identities=16% Similarity=0.123 Sum_probs=58.9
Q ss_pred cEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
+.++++.|--+-.....+.+.|-.+++-+.... ..+ .++..|.++.+=+..+.+-++++=-++.++++++.++..
T Consensus 402 ~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~----~v~-~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~ 476 (601)
T PRK03659 402 QVIIVGFGRFGQVIGRLLMANKMRITVLERDIS----AVN-LMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPE 476 (601)
T ss_pred CEEEecCchHHHHHHHHHHhCCCCEEEEECCHH----HHH-HHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHH
Confidence 567777776654333344455655665554433 233 346679999888888888888875567888888776632
Q ss_pred cccccCHHHHHHHHHhC-CCcEEEE
Q psy12791 156 LMTVFDVKAISAVVKQH-PDILLVL 179 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~-~~~~liv 179 (393)
.-..+...++++ |+..+++
T Consensus 477 -----~n~~i~~~~r~~~p~~~Iia 496 (601)
T PRK03659 477 -----DTMKIVELCQQHFPHLHILA 496 (601)
T ss_pred -----HHHHHHHHHHHHCCCCeEEE
Confidence 223456667765 5555554
No 478
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=30.83 E-value=28 Score=32.80 Aligned_cols=35 Identities=26% Similarity=0.302 Sum_probs=26.9
Q ss_pred chHHHhhhcCC---CcceEEEEEcCCHHHHHHHHHhcCc
Q psy12791 292 NHELAKSQWSG---TSGMLSFYVNGGAEETRIFLESLLI 327 (393)
Q Consensus 292 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~ 327 (393)
..++++|++.. ..+++||++ ++++++++|+++|..
T Consensus 313 ~~giivR~~~~~~~~~~~lRitv-gt~een~~ll~AL~~ 350 (356)
T COG0079 313 KKGILVRDCSSVGLLPGYLRITV-GTPEENDRLLAALRE 350 (356)
T ss_pred HCCEEEEeCCCCCCCCCeEEEEe-CCHHHHHHHHHHHHH
Confidence 34566777754 235899999 799999999999874
No 479
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=30.80 E-value=2e+02 Score=27.17 Aligned_cols=70 Identities=10% Similarity=0.059 Sum_probs=46.7
Q ss_pred HHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCC--CCcccccCHHHHHHHHHhCCCcEEEEeCccC
Q psy12791 114 FAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPT--NPLMTVFDVKAISAVVKQHPDILLVLDNTFL 184 (393)
Q Consensus 114 ~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~--nptG~~~~~~~l~~l~~~~~~~~livDea~~ 184 (393)
++.+-+.++..++.-.+.+.++...+++-..+.|++++.. +-.+...+++.|.++++.. ++.|++|.-..
T Consensus 228 i~~ir~~~~~pviiKgV~~~eda~~a~~~G~d~I~VSnhGGrqld~~~~~~~~L~ei~~~~-~~~vi~dGGIr 299 (361)
T cd04736 228 LRWLRDLWPHKLLVKGIVTAEDAKRCIELGADGVILSNHGGRQLDDAIAPIEALAEIVAAT-YKPVLIDSGIR 299 (361)
T ss_pred HHHHHHhCCCCEEEecCCCHHHHHHHHHCCcCEEEECCCCcCCCcCCccHHHHHHHHHHHh-CCeEEEeCCCC
Confidence 3444445555555444557888888877788999887653 2223333488888988888 88999997443
No 480
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=30.63 E-value=3e+02 Score=23.59 Aligned_cols=79 Identities=10% Similarity=0.050 Sum_probs=39.9
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe--eCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF--VDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~--~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++++|+..+ . ++..++..|-.|++....-.... ......+..+.++.. .+..+.+.+.+.++ .+..
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLK-AVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID 86 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence 356777777667 4 44456677877766543211111 111112233444444 44446766666554 2466
Q ss_pred EEEEecCCCC
Q psy12791 146 MVWIENPTNP 155 (393)
Q Consensus 146 ~v~l~~p~np 155 (393)
+++.+...++
T Consensus 87 ~vi~~ag~~~ 96 (239)
T PRK07666 87 ILINNAGISK 96 (239)
T ss_pred EEEEcCcccc
Confidence 7766554433
No 481
>PRK06721 threonine synthase; Reviewed
Probab=30.50 E-value=3.1e+02 Score=25.75 Aligned_cols=53 Identities=17% Similarity=0.061 Sum_probs=29.5
Q ss_pred cEEEeccHHHHH-HHHH-HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 76 HGLCYSSGLGAV-TAVT-HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~~-~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
..+..|+|.+++ .+.. +...-.=.|+++...... .-....+.+|++++.++.+
T Consensus 77 ~vV~aSsGN~G~alA~~aa~~G~~~~vvvp~~~~~~---~k~~~~~~~GA~V~~~~~~ 131 (352)
T PRK06721 77 AIICASTGNTSASAAAYAARLGMKCIIVIPEGKIAH---GKLAQAVAYGAEIISIEGN 131 (352)
T ss_pred EEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCCH---HHHHHHHHcCCEEEEECCC
Confidence 355567887775 3333 333222245555443221 2344567899999998854
No 482
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=30.40 E-value=2.6e+02 Score=24.86 Aligned_cols=70 Identities=14% Similarity=0.287 Sum_probs=41.0
Q ss_pred HhcccCCcEEEeeC--CCCHHHHHhhcC----C-CCcEEEEe----cCCCCcccccCHHHHHHHHHhCCCcEEEEeCccC
Q psy12791 116 QVAPKIGLEVDFVD--LRKIENLIKYIK----P-NTKMVWIE----NPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFL 184 (393)
Q Consensus 116 ~~~~~~g~~v~~~~--~~d~~~l~~~l~----~-~~~~v~l~----~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~ 184 (393)
..+...|..|..-. ..+++++..+++ . +.+++++. .-++++-...++..|..+.+.+ +.+|++|-+|+
T Consensus 116 ~~va~tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~-~lPVivd~SHs 194 (250)
T PRK13397 116 KTLSHIDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKT-DLPIIVDVSHS 194 (250)
T ss_pred HHHHccCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHh-CCCeEECCCCC
Confidence 33444454443322 125555555442 1 34555553 1224444467888888888878 89999999987
Q ss_pred cc
Q psy12791 185 TA 186 (393)
Q Consensus 185 ~~ 186 (393)
.+
T Consensus 195 ~G 196 (250)
T PRK13397 195 TG 196 (250)
T ss_pred Cc
Confidence 54
No 483
>CHL00194 ycf39 Ycf39; Provisional
Probab=30.27 E-value=3.5e+02 Score=24.68 Aligned_cols=91 Identities=19% Similarity=0.124 Sum_probs=49.8
Q ss_pred EEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 78 LCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 78 i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
|++++|+--+ .++..+++.|-+|.+..-... .. ......|++++..+..|.+.+.+++.. ..+|+-.....+
T Consensus 3 IlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~----~~-~~l~~~~v~~v~~Dl~d~~~l~~al~g-~d~Vi~~~~~~~ 76 (317)
T CHL00194 3 LLVIGATGTLGRQIVRQALDEGYQVRCLVRNLR----KA-SFLKEWGAELVYGDLSLPETLPPSFKG-VTAIIDASTSRP 76 (317)
T ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcChH----Hh-hhHhhcCCEEEECCCCCHHHHHHHHCC-CCEEEECCCCCC
Confidence 5555544445 455567777877654432211 11 112235788888888888888888863 566554322211
Q ss_pred cc--ccc--C---HHHHHHHHHhCCCc
Q psy12791 156 LM--TVF--D---VKAISAVVKQHPDI 175 (393)
Q Consensus 156 tG--~~~--~---~~~l~~l~~~~~~~ 175 (393)
.. ... + ...+.+.|++. ++
T Consensus 77 ~~~~~~~~~~~~~~~~l~~aa~~~-gv 102 (317)
T CHL00194 77 SDLYNAKQIDWDGKLALIEAAKAA-KI 102 (317)
T ss_pred CCccchhhhhHHHHHHHHHHHHHc-CC
Confidence 11 011 1 24577788877 64
No 484
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=30.21 E-value=3.3e+02 Score=25.07 Aligned_cols=78 Identities=18% Similarity=0.166 Sum_probs=39.9
Q ss_pred cEEEeccHHHHH-HHHHH-hcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCH---HHHHhhcCCC-CcEEEE
Q psy12791 76 HGLCYSSGLGAV-TAVTH-LLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKI---ENLIKYIKPN-TKMVWI 149 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~~~-~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~---~~l~~~l~~~-~~~v~l 149 (393)
..+..++|..+. .+..+ .+.-.=.|+++.. .+. ......+.+|++++.++.+.. ..+...+.++ +...++
T Consensus 53 ~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~-~~~---~k~~~l~~~GA~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 128 (316)
T cd06448 53 HVVCSSGGNAGLAAAYAARKLGVPCTIVVPES-TKP---RVVEKLRDEGATVVVHGKVWWEADNYLREELAENDPGPVYV 128 (316)
T ss_pred eEEEeCCcHHHHHHHHHHHHcCCCEEEEECCC-CCH---HHHHHHHHcCCEEEEECCchHHHHHHHHHHHHhccCCcEEe
Confidence 456667777775 44333 2222223444443 222 345667889999999875412 2233333333 255665
Q ss_pred ecCCCCcc
Q psy12791 150 ENPTNPLM 157 (393)
Q Consensus 150 ~~p~nptG 157 (393)
..-+||.+
T Consensus 129 ~~~~n~~~ 136 (316)
T cd06448 129 HPFDDPLI 136 (316)
T ss_pred CCCCCchh
Confidence 43345544
No 485
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=30.19 E-value=3.4e+02 Score=25.65 Aligned_cols=93 Identities=14% Similarity=0.113 Sum_probs=51.0
Q ss_pred EEeccHHHHHHHHHHhcCCCC--eEEEcCCCccchHHHHHHhcc---cCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecC
Q psy12791 78 LCYSSGLGAVTAVTHLLSAGD--HIISGDDVYGGTYRYFAQVAP---KIGLEVDFVDLRKIENLIKYIKPNTKMVWIENP 152 (393)
Q Consensus 78 i~~~~G~~al~~~~~~~~~gd--~vl~~~~~y~~~~~~~~~~~~---~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p 152 (393)
++++.|..+-.++..+.+.++ +|++.+..-. .....+. ...++...++..|.+++.+.+.+ .++|+-+.|
T Consensus 2 lvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-~dvVin~~g 76 (386)
T PF03435_consen 2 LVLGAGRVGSAIARLLARRGPFEEVTVADRNPE----KAERLAEKLLGDRVEAVQVDVNDPESLAELLRG-CDVVINCAG 76 (386)
T ss_dssp EEE--SHHHHHHHHHHHCTTCE-EEEEEESSHH----HHHHHHT--TTTTEEEEE--TTTHHHHHHHHTT-SSEEEE-SS
T ss_pred EEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHH----HHHHHHhhccccceeEEEEecCCHHHHHHHHhc-CCEEEECCc
Confidence 456666554333334444443 6777654443 2344443 34567777777788888888864 477776554
Q ss_pred CCCcccccCHHHHHHHHHhCCCcEEEEeCcc
Q psy12791 153 TNPLMTVFDVKAISAVVKQHPDILLVLDNTF 183 (393)
Q Consensus 153 ~nptG~~~~~~~l~~l~~~~~~~~livDea~ 183 (393)
.. .-..+++.|-+. |+. .+|-++
T Consensus 77 p~------~~~~v~~~~i~~-g~~-yvD~~~ 99 (386)
T PF03435_consen 77 PF------FGEPVARACIEA-GVH-YVDTSY 99 (386)
T ss_dssp GG------GHHHHHHHHHHH-T-E-EEESS-
T ss_pred cc------hhHHHHHHHHHh-CCC-eeccch
Confidence 43 345778888887 765 566444
No 486
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=30.09 E-value=1.7e+02 Score=26.63 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=44.2
Q ss_pred EcCCCccchHHHHHHhccc--CCcEEEeeCCC-CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEE
Q psy12791 102 SGDDVYGGTYRYFAQVAPK--IGLEVDFVDLR-KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLV 178 (393)
Q Consensus 102 ~~~~~y~~~~~~~~~~~~~--~g~~v~~~~~~-d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~li 178 (393)
.--++|.+ ...+... -.+-++.+|.. -++.+++....+++.+++-+-.-+ ..+.++|.++++++ |+.++
T Consensus 49 ~G~~~y~s----v~dlp~~~~~DlAvi~vp~~~v~~~l~e~~~~gvk~avI~s~Gf~---~~~~~~l~~~a~~~-girvl 120 (291)
T PRK05678 49 LGLPVFNT----VAEAVEATGANASVIYVPPPFAADAILEAIDAGIDLIVCITEGIP---VLDMLEVKAYLERK-KTRLI 120 (291)
T ss_pred eCeeccCC----HHHHhhccCCCEEEEEcCHHHHHHHHHHHHHCCCCEEEEECCCCC---HHHHHHHHHHHHHc-CCEEE
Confidence 34445553 3444443 45556666654 356666666667777666443322 11234899999999 88877
Q ss_pred EeCccC
Q psy12791 179 LDNTFL 184 (393)
Q Consensus 179 vDea~~ 184 (393)
==++.+
T Consensus 121 GPNc~G 126 (291)
T PRK05678 121 GPNCPG 126 (291)
T ss_pred CCCCCc
Confidence 655554
No 487
>COG1349 GlpR Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]
Probab=29.81 E-value=4e+02 Score=23.64 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhCCCcEEEeccHHHHHHHHHHhcCCCC
Q psy12791 61 RRNLERCIASLEEAKHGLCYSSGLGAVTAVTHLLSAGD 98 (393)
Q Consensus 61 ~~~lr~~la~~~~~~~~i~~~~G~~al~~~~~~~~~gd 98 (393)
-.++.++.|++....+.|++.+|++...++..+....+
T Consensus 78 K~~IA~~Aa~lI~~g~~ifld~GTT~~~la~~L~~~~~ 115 (253)
T COG1349 78 KRAIAKAAATLIEDGDTIFLDAGTTTLALARALPDDNN 115 (253)
T ss_pred HHHHHHHHHhhCCCCCEEEECCCcHHHHHHHHhCcCCC
Confidence 34566666777776689999999998755555554443
No 488
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=29.55 E-value=1.8e+02 Score=24.76 Aligned_cols=70 Identities=11% Similarity=0.135 Sum_probs=47.0
Q ss_pred HHHHHhcccCCcEEEeeCCC-CHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHHHhC-C--CcEEEEeCcc
Q psy12791 112 RYFAQVAPKIGLEVDFVDLR-KIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVVKQH-P--DILLVLDNTF 183 (393)
Q Consensus 112 ~~~~~~~~~~g~~v~~~~~~-d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~--~~~livDea~ 183 (393)
......++..|.+++.+..+ ..+++.+.+. .++.+|.++.....+ ...+.++.+..++. + ++.+++=...
T Consensus 100 ~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~--~~~~~~~i~~lr~~~~~~~~~i~vGG~~ 174 (201)
T cd02070 100 NLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTT--MGGMKEVIEALKEAGLRDKVKVMVGGAP 174 (201)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccc--HHHHHHHHHHHHHCCCCcCCeEEEECCc
Confidence 44666788999999988765 5677776654 468888886554332 34577777777765 3 5667766643
No 489
>PRK06139 short chain dehydrogenase; Provisional
Probab=29.44 E-value=2.6e+02 Score=25.91 Aligned_cols=64 Identities=11% Similarity=0.146 Sum_probs=35.3
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe--eCCCCHHHHHhhc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF--VDLRKIENLIKYI 140 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~--~~~~d~~~l~~~l 140 (393)
..+++|+++..| .. ...+.+.|.+|++..-.-.. .......++..|.++.. .++.|.+++++.+
T Consensus 8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~-l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 75 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEA-LQAVAEECRALGAEVLVVPTDVTDADQVKALA 75 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence 467788777777 44 45567788887765432211 11122223344655544 4555777666654
No 490
>PF07279 DUF1442: Protein of unknown function (DUF1442); InterPro: IPR009902 This family consists of several hypothetical Arabidopsis thaliana proteins of around 225 residues in length. The function of this family is unknown.
Probab=29.43 E-value=3.8e+02 Score=23.24 Aligned_cols=120 Identities=18% Similarity=0.133 Sum_probs=66.3
Q ss_pred CCCchHHHHHHHHHHHhCCCcEEEe-ccHHH-H--HHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE-E-EeeC
Q psy12791 56 SNNPTRRNLERCIASLEEAKHGLCY-SSGLG-A--VTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE-V-DFVD 129 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~~~i~~-~~G~~-a--l~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~-v-~~~~ 129 (393)
+.+|...|+-.++|.=-++.--+.+ ++|.. + +.+..+.-+.|.++++..|.... ...+.......|.. . .++-
T Consensus 24 ~~ep~~aEfISAlAAG~nAkliVe~~s~g~~~~ttiaLaaAAr~TgGR~vCIvp~~~~-~~~~~~~l~~~~~~~~vEfvv 102 (218)
T PF07279_consen 24 FKEPGVAEFISALAAGWNAKLIVEAWSSGGAISTTIALAAAARQTGGRHVCIVPDEQS-LSEYKKALGEAGLSDVVEFVV 102 (218)
T ss_pred cCCCCHHHHHHHHhccccceEEEEEecCCCchHhHHHHHHHHHhcCCeEEEEcCChhh-HHHHHHHHhhccccccceEEe
Confidence 3467777787777764443322222 33422 2 32222233456677776676653 22455555555643 2 3232
Q ss_pred CCCHHHHHhhcCCCCcEEEE-ecCCCCcccccCHH-HHHHHHHhC-CCcEEEEeCccC
Q psy12791 130 LRKIENLIKYIKPNTKMVWI-ENPTNPLMTVFDVK-AISAVVKQH-PDILLVLDNTFL 184 (393)
Q Consensus 130 ~~d~~~l~~~l~~~~~~v~l-~~p~nptG~~~~~~-~l~~l~~~~-~~~~livDea~~ 184 (393)
-+..+++...+. +...+++ |... +.. ++.++++-. +|.+||.++++.
T Consensus 103 g~~~e~~~~~~~-~iDF~vVDc~~~-------d~~~~vl~~~~~~~~GaVVV~~Na~~ 152 (218)
T PF07279_consen 103 GEAPEEVMPGLK-GIDFVVVDCKRE-------DFAARVLRAAKLSPRGAVVVCYNAFS 152 (218)
T ss_pred cCCHHHHHhhcc-CCCEEEEeCCch-------hHHHHHHHHhccCCCceEEEEecccc
Confidence 234666666553 5777777 3432 333 666776653 489999999887
No 491
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=29.36 E-value=4.5e+02 Score=24.09 Aligned_cols=97 Identities=8% Similarity=0.157 Sum_probs=49.2
Q ss_pred cEEEeccHHHHH-HHHHHhcCCCC--eEEEc--CCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEE-
Q psy12791 76 HGLCYSSGLGAV-TAVTHLLSAGD--HIISG--DDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWI- 149 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~~~~~~~gd--~vl~~--~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l- 149 (393)
+.|++-+.+..+ ..+....+.|. +|++. .|.+.+ . .....+...|+++..++-.....+ + ++...|++
T Consensus 117 ~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G-~-~~a~~L~~~gI~vtlI~Dsa~~~~---m-~~vd~VivG 190 (301)
T TIGR00511 117 DVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQG-H-ITAKELRDYGIPVTLIVDSAVRYF---M-KEVDHVVVG 190 (301)
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchH-H-HHHHHHHHCCCCEEEEehhHHHHH---H-HhCCEEEEC
Confidence 444443334333 44444433443 34443 344444 2 234445677999998863322222 2 23455555
Q ss_pred ecCCCCcccccC---HHHHHHHHHhCCCcEEEE
Q psy12791 150 ENPTNPLMTVFD---VKAISAVVKQHPDILLVL 179 (393)
Q Consensus 150 ~~p~nptG~~~~---~~~l~~l~~~~~~~~liv 179 (393)
..--...|.+.. -..++-.|+.+ ++++++
T Consensus 191 ad~v~~nG~v~nkiGT~~lA~~Ak~~-~vPv~V 222 (301)
T TIGR00511 191 ADAITANGALINKIGTSQLALAAREA-RVPFMV 222 (301)
T ss_pred ccEEecCCCEEEHHhHHHHHHHHHHh-CCCEEE
Confidence 222233354443 34577778888 776665
No 492
>TIGR00150 HI0065_YjeE ATPase, YjeE family. Members of this family have a conserved nucleotide-binding motif GXXGXGKT and a nucleotide-binding fold. Member protein YjeE of Haemophilus influenzae (HI0065) was shown to have ATPase activity.
Probab=29.19 E-value=2.9e+02 Score=21.82 Aligned_cols=89 Identities=15% Similarity=0.140 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHhCCCcEEEe----ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC---C
Q psy12791 60 TRRNLERCIASLEEAKHGLCY----SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL---R 131 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~~~i~~----~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~---~ 131 (393)
...++-+.|++.+...+.+++ ++|-+.+ ..+...+...+ -+.+|+|.- .+.|. .-+.++.++++ .
T Consensus 7 ~t~~l~~~l~~~l~~~~~i~l~G~lGaGKTtl~~~l~~~lg~~~--~v~SPTf~l-v~~Y~----~~~~~l~H~DlYRl~ 79 (133)
T TIGR00150 7 AMDKFGKAFAKPLDFGTVVLLKGDLGAGKTTLVQGLLQGLGIQG--NVTSPTFTL-VNEYN----EGNLMVYHFDLYRLA 79 (133)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEcCCCCCHHHHHHHHHHHcCCCC--cccCCCeee-eeecc----cCCCcEEEechhhcC
Confidence 345677778877755555554 5555554 44444444322 477888752 11221 11335666655 2
Q ss_pred CHHHH-----HhhcCCCCcEEEEecCCCCc
Q psy12791 132 KIENL-----IKYIKPNTKMVWIENPTNPL 156 (393)
Q Consensus 132 d~~~l-----~~~l~~~~~~v~l~~p~npt 156 (393)
+.+++ ++.+.+ ..++++++|+.-.
T Consensus 80 ~~~e~~~lg~ee~~~~-~~i~~IEW~e~~~ 108 (133)
T TIGR00150 80 DPEELELMGLEDYFEG-DGICLVEWPEEGL 108 (133)
T ss_pred ChhHHHHCChHHhcCC-CCEEEEECCcccc
Confidence 44443 333332 3688889998654
No 493
>PRK05601 DNA polymerase III subunit epsilon; Validated
Probab=28.70 E-value=60 Score=30.62 Aligned_cols=58 Identities=22% Similarity=0.224 Sum_probs=38.4
Q ss_pred CCcEEEeeCCC--CHHHHHhhc-----------CCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcc
Q psy12791 121 IGLEVDFVDLR--KIENLIKYI-----------KPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTA 186 (393)
Q Consensus 121 ~g~~v~~~~~~--d~~~l~~~l-----------~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~ 186 (393)
.|.+|+.-+-. |.+.|.+.+ ...|.+|+++.+..-+|..+ -|++. |++|+-|+.|...
T Consensus 296 ~Gm~v~~~~e~~~~~d~li~~~~~agL~y~~~~~r~tslvv~n~~~~~~gk~~-------~a~~~-gipl~~d~~fl~~ 366 (377)
T PRK05601 296 AGMEVVVAPEITMDPDIIIQAIVRAGLAYSEKLTRQTSVVVCNQTRDLDGKAM-------HAQRK-GIPLLSDVAFLAA 366 (377)
T ss_pred cCcEEEEeCCccCCHHHHHHHHHHccchhhhccccceeEEEeCCCCCccchhh-------hhhhc-CCCccCHHHHHHH
Confidence 46666665542 666666544 23467777777776677644 55667 9999999988653
No 494
>cd08071 MPN_DUF2466 Mov34/MPN/PAD-1 family. Mov34 DUF2466 (also known as DNA repair protein RadC) domain of unknown function contains the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity. However, to date, the name RadC has been misleading and no function has been determined.
Probab=28.54 E-value=1e+02 Score=23.46 Aligned_cols=40 Identities=10% Similarity=0.066 Sum_probs=24.2
Q ss_pred HHHhhcCCCCcEEEEecCCCCcccccC-------HHHHHHHHHhCCCcE
Q psy12791 135 NLIKYIKPNTKMVWIENPTNPLMTVFD-------VKAISAVVKQHPDIL 176 (393)
Q Consensus 135 ~l~~~l~~~~~~v~l~~p~nptG~~~~-------~~~l~~l~~~~~~~~ 176 (393)
-++.++..+...+++. .|.|+|...| -++|.+.++.. |+.
T Consensus 51 i~~~aL~~~A~~vil~-HNHPsG~~~PS~~D~~~T~~l~~~~~~l-~i~ 97 (113)
T cd08071 51 IFKEALRHNAAAIILA-HNHPSGDPTPSREDIELTKRLKEAGELL-GIR 97 (113)
T ss_pred HHHHHHHHhhheEEEE-eeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCE
Confidence 3445666665555553 3447799987 34566666666 553
No 495
>TIGR00223 panD L-aspartate-alpha-decarboxylase. Members of this family are aspartate 1-decarboxylase, the enzyme that makes beta-alanine and C02 from aspartate. Beta-alanine is then used to make the vitamin pantothenate, from which coenzyme A is made. Aspartate 1-decarboxylase is synthesized as a proenzyme, then cleaved to an alpha (C-terminal) and beta (N-terminal) subunit with a pyruvoyl group.
Probab=28.42 E-value=46 Score=25.79 Aligned_cols=37 Identities=22% Similarity=0.168 Sum_probs=23.8
Q ss_pred HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 89 AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 89 ~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
+...+.++||.|++...++.. ..-++.+.-+++.++.
T Consensus 74 AAArl~~~GD~VII~sy~~~~-----~~e~~~~~P~vv~vd~ 110 (126)
T TIGR00223 74 AAARCVSVGDIVIIASYVTMP-----DEEARTHRPNVAYFEG 110 (126)
T ss_pred HHHhcCCCCCEEEEEECCcCC-----HHHHhcCCCEEEEECC
Confidence 345667899999998766643 2223445666776654
No 496
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=28.38 E-value=1.3e+02 Score=24.16 Aligned_cols=54 Identities=19% Similarity=0.139 Sum_probs=35.6
Q ss_pred CHHHHHhhcCC-CCcEEEEecCCCCcccccCHH----HHHHHHHh-CCCcEEEEeCccCc
Q psy12791 132 KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVK----AISAVVKQ-HPDILLVLDNTFLT 185 (393)
Q Consensus 132 d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~----~l~~l~~~-~~~~~livDea~~~ 185 (393)
+.+.+.+.+.+ ++..|++-.|.|..|...+.. ++.+..++ ++-..+++||-.+.
T Consensus 41 ~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERltT 100 (141)
T COG0816 41 DFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERLST 100 (141)
T ss_pred hHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCccCH
Confidence 55666666654 588999999999999999833 33333333 32236788886653
No 497
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=28.35 E-value=1.2e+02 Score=25.82 Aligned_cols=35 Identities=17% Similarity=0.152 Sum_probs=27.3
Q ss_pred CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEE
Q psy12791 143 NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVL 179 (393)
Q Consensus 143 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~liv 179 (393)
.+..| +|-.-|+.|.....+++.+++++| |..++.
T Consensus 156 ~Pa~V-icEi~~~dG~mar~~~~~~fa~~h-~l~~it 190 (203)
T COG0108 156 KPAGV-ICEIMNDDGTMARLPELEEFAKEH-GLPVIT 190 (203)
T ss_pred CCcEE-EEEEeCCCccccChHHHHHHHHHc-CCcEEE
Confidence 34444 455556799999999999999999 887764
No 498
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=28.16 E-value=1.2e+02 Score=25.77 Aligned_cols=35 Identities=14% Similarity=0.076 Sum_probs=26.0
Q ss_pred CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEE
Q psy12791 143 NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVL 179 (393)
Q Consensus 143 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~liv 179 (393)
.+.+|+++-. |+.|..++.+++.+++++| ++.++.
T Consensus 152 ~p~avi~eil-~~dG~~~~~~~~~~fA~~~-~l~~vs 186 (194)
T PF00926_consen 152 SPVAVICEIL-DDDGDMARRDELEEFAKKH-GLPIVS 186 (194)
T ss_dssp -SBEEEEEBB-ETTSSBHCHHHHHHHHHHT-T-EEEE
T ss_pred CCcEEEEEEe-CCCCCcCCHHHHHHHHHHc-CCcEEE
Confidence 3555555444 5689999999999999999 987763
No 499
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=27.97 E-value=4.8e+02 Score=24.00 Aligned_cols=98 Identities=10% Similarity=0.164 Sum_probs=50.4
Q ss_pred cEEEeccHHHHH-HHHHHhcCCCC--eEEEc--CCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEE-
Q psy12791 76 HGLCYSSGLGAV-TAVTHLLSAGD--HIISG--DDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWI- 149 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~~~~~~~gd--~vl~~--~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l- 149 (393)
+.|++-+.+..+ ..+....+.|+ +|++. .|.+.+ . .....+...|+++..++-.....+. ++...|++
T Consensus 122 ~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G-~-~~a~~L~~~GI~vtlI~Dsav~~~m----~~vd~VivG 195 (310)
T PRK08535 122 DVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQG-H-ITAKELAEYGIPVTLIVDSAVRYFM----KDVDKVVVG 195 (310)
T ss_pred CEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhH-H-HHHHHHHHCCCCEEEEehhHHHHHH----HhCCEEEEC
Confidence 444443334333 44444444443 44443 344443 2 2334456679999988743333332 23555555
Q ss_pred ecCCCCcccccC---HHHHHHHHHhCCCcEEEEe
Q psy12791 150 ENPTNPLMTVFD---VKAISAVVKQHPDILLVLD 180 (393)
Q Consensus 150 ~~p~nptG~~~~---~~~l~~l~~~~~~~~livD 180 (393)
..--...|.+.. -..++-+|+.+ ++++++=
T Consensus 196 Ad~v~~nG~v~nkiGT~~~A~~Ak~~-~vPv~V~ 228 (310)
T PRK08535 196 ADAITANGAVINKIGTSQIALAAHEA-RVPFMVA 228 (310)
T ss_pred ccEEecCCCEEeHHhHHHHHHHHHHh-CCCEEEe
Confidence 232334455554 34577778888 7766653
No 500
>PRK13551 agmatine deiminase; Provisional
Probab=27.94 E-value=1.3e+02 Score=28.45 Aligned_cols=48 Identities=15% Similarity=0.275 Sum_probs=35.8
Q ss_pred cCCCCchHHHHHHHHHHHhCCCcEEEeccH-----HHH-HHHHHHhcCCCCeEEE
Q psy12791 54 SRSNNPTRRNLERCIASLEEAKHGLCYSSG-----LGA-VTAVTHLLSAGDHIIS 102 (393)
Q Consensus 54 ~~~~~~~~~~lr~~la~~~~~~~~i~~~~G-----~~a-l~~~~~~~~~gd~vl~ 102 (393)
.|.|.-...++++.|.+++|++..|.+..| +.+ +-.+..++.+| +|++
T Consensus 175 nRNP~ls~~~ie~~Lk~~LGv~kvIWL~~g~~~DdTdGHiD~~arFv~~~-~vl~ 228 (362)
T PRK13551 175 NRNPHLTKEQIEQLLRDYLGVEKVIWLPDGIYNDETDGHVDNVCCFVRPG-EVAL 228 (362)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcchhheEEeeCCC-EEEE
Confidence 566667788999999999999998888776 223 35566777776 4554
Done!