Query psy12791
Match_columns 393
No_of_seqs 257 out of 2836
Neff 9.9
Searched_HMMs 29240
Date Fri Aug 16 19:44:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12791.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12791hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nmy_A Xometc, cystathionine g 100.0 1.6E-53 5.4E-58 405.3 39.6 382 4-388 14-397 (400)
2 3ndn_A O-succinylhomoserine su 100.0 2.8E-53 9.7E-58 405.3 39.4 376 7-387 24-413 (414)
3 3cog_A Cystathionine gamma-lya 100.0 5.3E-52 1.8E-56 395.9 41.9 387 3-392 12-400 (403)
4 3qhx_A Cystathionine gamma-syn 100.0 1.9E-51 6.7E-56 390.9 41.4 373 9-387 17-391 (392)
5 3ri6_A O-acetylhomoserine sulf 100.0 1.4E-52 4.9E-57 401.3 32.5 376 9-388 26-430 (430)
6 1qgn_A Protein (cystathionine 100.0 2.2E-51 7.6E-56 394.2 39.5 379 9-390 55-445 (445)
7 1n8p_A Cystathionine gamma-lya 100.0 4.1E-50 1.4E-54 381.8 38.6 383 4-391 2-392 (393)
8 2fq6_A Cystathionine beta-lyas 100.0 5.1E-51 1.7E-55 389.4 32.0 374 9-390 25-414 (415)
9 3acz_A Methionine gamma-lyase; 100.0 1.7E-48 5.8E-53 370.5 39.2 376 8-389 4-388 (389)
10 1gc0_A Methionine gamma-lyase; 100.0 3.9E-47 1.3E-51 362.4 37.6 380 7-390 7-397 (398)
11 1e5e_A MGL, methionine gamma-l 100.0 1E-46 3.4E-51 359.9 36.7 382 6-392 4-397 (404)
12 2ctz_A O-acetyl-L-homoserine s 100.0 1.6E-45 5.4E-50 353.5 34.4 376 9-387 2-420 (421)
13 1cs1_A CGS, protein (cystathio 100.0 2.9E-44 9.8E-49 341.3 42.2 381 8-392 3-385 (386)
14 2rfv_A Methionine gamma-lyase; 100.0 7.2E-45 2.5E-49 346.8 37.3 379 8-390 7-396 (398)
15 2cb1_A O-acetyl homoserine sul 100.0 3.2E-44 1.1E-48 343.8 37.1 374 9-389 2-411 (412)
16 1ibj_A CBL, cystathionine beta 100.0 1.1E-43 3.9E-48 343.2 40.3 377 9-390 86-462 (464)
17 1pff_A Methionine gamma-lyase; 100.0 1.4E-39 4.8E-44 302.5 31.9 325 63-390 2-330 (331)
18 1fg7_A Histidinol phosphate am 100.0 8.2E-35 2.8E-39 273.1 30.5 303 22-390 29-354 (356)
19 3ffh_A Histidinol-phosphate am 100.0 2.9E-34 1E-38 270.0 24.0 311 22-390 32-362 (363)
20 3get_A Histidinol-phosphate am 100.0 1.8E-34 6.1E-39 271.7 21.7 310 22-391 30-364 (365)
21 3ly1_A Putative histidinol-pho 100.0 9.2E-34 3.1E-38 265.6 26.0 312 19-391 13-349 (354)
22 3p1t_A Putative histidinol-pho 100.0 2.7E-33 9.3E-38 260.6 27.0 306 21-391 15-334 (337)
23 1lc5_A COBD, L-threonine-O-3-p 100.0 1.3E-33 4.5E-38 265.7 23.0 326 6-390 8-356 (364)
24 3ftb_A Histidinol-phosphate am 100.0 2.9E-33 9.8E-38 262.9 24.7 314 21-392 25-359 (361)
25 3euc_A Histidinol-phosphate am 100.0 1.1E-33 3.9E-38 266.3 20.6 315 21-391 29-365 (367)
26 1b5p_A Protein (aspartate amin 100.0 2E-33 6.9E-38 266.5 20.7 316 22-389 31-380 (385)
27 3hdo_A Histidinol-phosphate am 100.0 4.6E-33 1.6E-37 261.6 21.7 315 22-392 26-353 (360)
28 3kax_A Aminotransferase, class 100.0 2.6E-32 8.8E-37 258.4 24.7 323 22-390 24-381 (383)
29 3fkd_A L-threonine-O-3-phospha 100.0 4.1E-33 1.4E-37 260.9 19.0 310 22-391 15-339 (350)
30 1iay_A ACC synthase 2, 1-amino 100.0 4.3E-32 1.5E-36 260.9 25.3 328 15-391 29-424 (428)
31 2dou_A Probable N-succinyldiam 100.0 9.6E-33 3.3E-37 260.9 19.9 318 22-390 25-374 (376)
32 2z61_A Probable aspartate amin 100.0 2.2E-32 7.5E-37 257.9 21.5 315 22-391 29-368 (370)
33 4dq6_A Putative pyridoxal phos 100.0 3.3E-32 1.1E-36 258.4 21.8 322 22-390 32-389 (391)
34 3nra_A Aspartate aminotransfer 100.0 2.2E-32 7.6E-37 261.0 20.5 323 21-390 38-401 (407)
35 1v2d_A Glutamine aminotransfer 100.0 8.1E-32 2.8E-36 255.0 22.6 314 23-390 26-367 (381)
36 3tqx_A 2-amino-3-ketobutyrate 100.0 9E-32 3.1E-36 256.0 22.5 285 58-391 87-393 (399)
37 1o4s_A Aspartate aminotransfer 100.0 1.8E-31 6.1E-36 253.4 24.3 313 23-390 42-385 (389)
38 3h14_A Aminotransferase, class 100.0 8E-32 2.7E-36 255.9 21.7 318 22-390 31-378 (391)
39 1c7n_A Cystalysin; transferase 100.0 1.2E-31 4.2E-36 255.3 23.0 316 22-387 31-386 (399)
40 1bs0_A Protein (8-amino-7-oxon 100.0 1.2E-31 4.1E-36 254.0 22.7 319 22-390 39-383 (384)
41 2o1b_A Aminotransferase, class 100.0 2.4E-32 8.4E-37 260.7 17.7 318 23-390 48-399 (404)
42 1fc4_A 2-amino-3-ketobutyrate 100.0 8.7E-32 3E-36 256.5 21.4 320 22-391 45-394 (401)
43 3jtx_A Aminotransferase; NP_28 100.0 8.1E-32 2.8E-36 256.2 20.8 321 22-390 30-394 (396)
44 3ezs_A Aminotransferase ASPB; 100.0 9.5E-32 3.2E-36 254.0 20.9 312 23-391 24-372 (376)
45 3fdb_A Beta C-S lyase, putativ 100.0 1E-32 3.4E-37 260.7 14.1 317 21-390 22-372 (377)
46 3dzz_A Putative pyridoxal 5'-p 100.0 1.1E-31 3.6E-36 254.9 21.2 322 23-390 28-385 (391)
47 2x5d_A Probable aminotransfera 100.0 1.9E-31 6.3E-36 255.2 22.9 318 22-389 37-393 (412)
48 1j32_A Aspartate aminotransfer 100.0 9.5E-32 3.2E-36 255.1 20.5 318 22-390 30-383 (388)
49 3g0t_A Putative aminotransfera 100.0 2.4E-32 8.2E-37 263.3 16.5 327 22-391 44-434 (437)
50 3i16_A Aluminum resistance pro 100.0 4.2E-31 1.4E-35 251.5 24.3 317 57-391 71-426 (427)
51 3ele_A Amino transferase; RER0 100.0 2.9E-31 9.8E-36 252.7 22.5 317 22-390 35-392 (398)
52 1gd9_A Aspartate aminotransfer 100.0 1.7E-31 5.7E-36 253.5 20.1 319 22-390 26-382 (389)
53 2r2n_A Kynurenine/alpha-aminoa 100.0 4.1E-30 1.4E-34 246.9 29.6 290 58-390 77-420 (425)
54 3cq5_A Histidinol-phosphate am 100.0 2.4E-31 8.3E-36 250.7 20.4 307 25-391 33-365 (369)
55 3op7_A Aminotransferase class 100.0 1.4E-30 4.7E-35 246.0 24.7 216 57-280 61-299 (375)
56 3fvs_A Kynurenine--oxoglutarat 100.0 2E-31 6.7E-36 255.8 19.1 325 23-390 29-418 (422)
57 2x5f_A Aspartate_tyrosine_phen 100.0 7.7E-31 2.6E-35 252.4 22.7 314 22-390 47-425 (430)
58 3d6k_A Putative aminotransfera 100.0 2.6E-30 8.8E-35 248.1 25.6 321 24-390 34-414 (422)
59 3hvy_A Cystathionine beta-lyas 100.0 3.8E-30 1.3E-34 244.9 26.3 317 57-390 72-425 (427)
60 3jzl_A Putative cystathionine 100.0 6.7E-30 2.3E-34 242.5 27.5 318 56-390 56-408 (409)
61 3e2y_A Kynurenine-oxoglutarate 100.0 7.9E-31 2.7E-35 250.6 20.6 324 22-389 23-408 (410)
62 3aow_A Putative uncharacterize 100.0 3.3E-30 1.1E-34 249.0 25.0 284 59-388 118-439 (448)
63 1u08_A Hypothetical aminotrans 100.0 4.3E-31 1.5E-35 250.5 17.9 318 23-388 31-384 (386)
64 1xi9_A Putative transaminase; 100.0 7.5E-31 2.5E-35 250.6 19.6 319 22-390 38-399 (406)
65 1d2f_A MALY protein; aminotran 100.0 1.5E-30 5.1E-35 247.1 21.2 316 22-388 28-383 (390)
66 3dyd_A Tyrosine aminotransfera 100.0 4.3E-30 1.5E-34 246.9 24.4 309 32-390 69-420 (427)
67 1yiz_A Kynurenine aminotransfe 100.0 2.3E-30 7.9E-35 248.9 22.1 326 23-391 38-426 (429)
68 3b46_A Aminotransferase BNA3; 100.0 1.9E-30 6.5E-35 250.8 21.5 326 22-390 57-443 (447)
69 2w8t_A SPT, serine palmitoyltr 100.0 1.1E-29 3.6E-34 244.2 26.4 286 58-391 108-412 (427)
70 2gb3_A Aspartate aminotransfer 100.0 3.3E-30 1.1E-34 246.3 22.5 319 23-390 44-398 (409)
71 3l8a_A METC, putative aminotra 100.0 8.6E-31 2.9E-35 251.3 17.0 323 23-391 62-419 (421)
72 1uu1_A Histidinol-phosphate am 100.0 2.4E-30 8.1E-35 240.7 19.1 300 18-389 15-333 (335)
73 3a2b_A Serine palmitoyltransfe 100.0 8.2E-29 2.8E-33 235.7 29.9 319 22-390 43-388 (398)
74 3ppl_A Aspartate aminotransfer 100.0 2.7E-29 9.2E-34 241.4 26.4 291 54-388 72-414 (427)
75 2o0r_A RV0858C (N-succinyldiam 100.0 3E-30 1E-34 246.8 19.2 329 23-390 26-392 (411)
76 1jg8_A L-ALLO-threonine aldola 100.0 1E-30 3.5E-35 244.2 15.1 316 21-391 2-343 (347)
77 2dr1_A PH1308 protein, 386AA l 100.0 2.8E-29 9.5E-34 237.7 24.8 314 30-390 26-375 (386)
78 2zyj_A Alpha-aminodipate amino 100.0 2E-29 6.8E-34 239.9 23.7 285 59-389 74-388 (397)
79 3ez1_A Aminotransferase MOCR f 100.0 2.5E-29 8.4E-34 241.3 24.5 287 58-389 69-410 (423)
80 1bw0_A TAT, protein (tyrosine 100.0 1E-29 3.5E-34 243.4 21.5 307 32-388 48-407 (416)
81 3qgu_A LL-diaminopimelate amin 100.0 4.6E-30 1.6E-34 248.3 17.8 320 22-391 69-437 (449)
82 1vp4_A Aminotransferase, putat 100.0 2.9E-29 9.8E-34 241.0 22.9 285 59-389 85-413 (425)
83 1kmj_A Selenocysteine lyase; p 100.0 2.8E-29 9.6E-34 239.2 22.7 295 58-391 66-402 (406)
84 3zrp_A Serine-pyruvate aminotr 100.0 6.3E-29 2.2E-33 235.0 23.0 315 29-391 7-360 (384)
85 3tcm_A Alanine aminotransferas 100.0 4.6E-29 1.6E-33 244.1 22.5 217 58-280 133-407 (500)
86 1t3i_A Probable cysteine desul 100.0 5.4E-29 1.8E-33 238.4 22.3 300 58-391 71-410 (420)
87 2zc0_A Alanine glyoxylate tran 100.0 1E-28 3.4E-33 235.8 23.3 285 59-389 75-399 (407)
88 3piu_A 1-aminocyclopropane-1-c 100.0 1.6E-28 5.4E-33 236.6 24.8 284 59-390 86-428 (435)
89 3ihj_A Alanine aminotransferas 100.0 1.8E-28 6.2E-33 239.6 25.3 217 58-280 128-406 (498)
90 3t18_A Aminotransferase class 100.0 4.9E-29 1.7E-33 238.5 20.9 303 32-392 53-412 (413)
91 3cai_A Possible aminotransfera 100.0 1.9E-29 6.5E-34 240.7 17.9 294 58-390 68-405 (406)
92 1elu_A L-cysteine/L-cystine C- 100.0 9.2E-29 3.1E-33 234.4 22.3 287 59-391 59-389 (390)
93 3ei9_A LL-diaminopimelate amin 100.0 2E-29 6.9E-34 242.6 17.9 316 22-389 56-423 (432)
94 3bwn_A AT1G70560, L-tryptophan 100.0 1.3E-29 4.6E-34 240.6 16.4 284 62-390 71-383 (391)
95 3kki_A CAI-1 autoinducer synth 100.0 5.4E-29 1.9E-33 237.9 20.7 282 59-391 104-401 (409)
96 2huf_A Alanine glyoxylate amin 100.0 4.3E-29 1.5E-33 237.1 19.2 316 28-390 23-379 (393)
97 1b9h_A AHBA synthase, protein 100.0 2.7E-28 9.4E-33 231.3 24.1 314 53-391 32-385 (388)
98 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 2.2E-29 7.4E-34 237.2 15.6 292 53-391 47-367 (371)
99 3rq1_A Aminotransferase class 100.0 2.3E-28 7.8E-33 234.2 22.6 237 32-276 54-348 (418)
100 1vjo_A Alanine--glyoxylate ami 100.0 4.3E-29 1.5E-33 237.1 16.8 316 29-391 39-392 (393)
101 3lvm_A Cysteine desulfurase; s 100.0 1.2E-28 4.2E-33 236.3 20.0 301 59-391 68-396 (423)
102 2ch1_A 3-hydroxykynurenine tra 100.0 1.5E-28 5.2E-33 233.5 20.4 318 27-390 21-379 (396)
103 3ffr_A Phosphoserine aminotran 100.0 1.1E-28 3.7E-33 231.5 19.1 284 59-391 43-361 (362)
104 4hvk_A Probable cysteine desul 100.0 1.7E-28 5.7E-33 231.7 20.1 302 57-391 41-370 (382)
105 2bwn_A 5-aminolevulinate synth 100.0 1.4E-27 4.7E-32 227.5 26.3 284 58-391 90-397 (401)
106 3uwc_A Nucleotide-sugar aminot 100.0 3.9E-28 1.3E-32 229.0 21.8 303 57-391 36-368 (374)
107 1iug_A Putative aspartate amin 100.0 1E-28 3.4E-33 230.9 17.5 312 29-391 6-345 (352)
108 2z9v_A Aspartate aminotransfer 100.0 2.3E-28 7.7E-33 232.1 19.4 314 31-390 16-367 (392)
109 3frk_A QDTB; aminotransferase, 100.0 2.4E-28 8.1E-33 230.5 19.2 304 57-391 34-365 (373)
110 1m32_A 2-aminoethylphosphonate 100.0 1.1E-28 3.8E-33 231.6 16.9 315 29-391 9-362 (366)
111 3asa_A LL-diaminopimelate amin 100.0 9.1E-29 3.1E-33 235.6 16.3 318 22-390 33-389 (400)
112 3pj0_A LMO0305 protein; struct 100.0 5E-28 1.7E-32 227.0 20.6 318 27-391 19-356 (359)
113 3if2_A Aminotransferase; YP_26 100.0 9.5E-28 3.2E-32 231.7 23.1 293 58-389 82-435 (444)
114 3isl_A Purine catabolism prote 100.0 4.2E-28 1.4E-32 232.0 20.3 315 29-390 16-386 (416)
115 2yrr_A Aminotransferase, class 100.0 1.1E-28 3.7E-33 230.6 15.0 311 29-391 5-350 (353)
116 3vax_A Putative uncharacterize 100.0 7.6E-29 2.6E-33 236.0 14.0 306 54-391 58-397 (400)
117 3b1d_A Betac-S lyase; HET: PLP 99.9 7.3E-31 2.5E-35 249.4 0.0 317 23-389 32-388 (392)
118 3g7q_A Valine-pyruvate aminotr 100.0 2.7E-27 9.1E-32 226.6 24.7 295 58-390 74-409 (417)
119 2oga_A Transaminase; PLP-depen 100.0 1.2E-27 4.2E-32 227.8 22.1 333 23-391 31-393 (399)
120 3nnk_A Ureidoglycine-glyoxylat 100.0 2.3E-28 7.8E-33 233.4 17.1 317 28-391 17-387 (411)
121 4eb5_A Probable cysteine desul 100.0 1.9E-27 6.4E-32 224.8 22.8 300 59-390 43-369 (382)
122 3nyt_A Aminotransferase WBPE; 100.0 2.5E-27 8.4E-32 223.1 23.1 303 57-390 33-360 (367)
123 4eu1_A Mitochondrial aspartate 100.0 2.8E-27 9.5E-32 226.0 23.8 247 22-276 41-344 (409)
124 7aat_A Aspartate aminotransfer 100.0 3.3E-27 1.1E-31 224.8 24.2 277 58-391 70-400 (401)
125 3ruy_A Ornithine aminotransfer 100.0 2.1E-28 7.3E-33 232.4 15.3 316 22-391 36-391 (392)
126 3kgw_A Alanine-glyoxylate amin 100.0 7.1E-28 2.4E-32 228.4 18.3 317 28-390 27-384 (393)
127 1eg5_A Aminotransferase; PLP-d 100.0 1.8E-27 6E-32 225.0 20.6 303 58-391 43-373 (384)
128 2hox_A ALLIIN lyase 1; cystein 100.0 3.6E-28 1.2E-32 233.2 15.3 323 23-390 57-421 (427)
129 3fsl_A Aromatic-amino-acid ami 100.0 3.6E-27 1.2E-31 224.2 21.3 213 58-276 69-333 (397)
130 3ju7_A Putative PLP-dependent 100.0 1.8E-27 6E-32 224.6 18.6 306 58-391 35-372 (377)
131 4f4e_A Aromatic-amino-acid ami 100.0 2.1E-27 7.2E-32 227.7 19.5 213 58-276 91-355 (420)
132 3f6t_A Aspartate aminotransfer 100.0 5.8E-27 2E-31 230.7 22.6 164 58-227 137-334 (533)
133 3f9t_A TDC, L-tyrosine decarbo 100.0 2.1E-27 7.3E-32 225.3 18.2 278 59-391 69-395 (397)
134 3dr4_A Putative perosamine syn 99.9 4.5E-26 1.5E-30 216.3 26.2 306 57-391 54-390 (391)
135 3f0h_A Aminotransferase; RER07 99.9 5.5E-27 1.9E-31 221.2 19.7 314 28-391 23-371 (376)
136 2eh6_A Acoat, acetylornithine 99.9 4.4E-28 1.5E-32 228.7 12.0 313 23-390 29-374 (375)
137 1v72_A Aldolase; PLP-dependent 99.9 1.1E-25 3.7E-30 210.6 27.6 317 17-391 2-350 (356)
138 2po3_A 4-dehydrase; external a 99.9 3.4E-26 1.2E-30 219.5 24.6 349 10-391 5-383 (424)
139 2aeu_A Hypothetical protein MJ 99.9 1.9E-26 6.6E-31 217.5 21.6 227 24-269 30-269 (374)
140 2bkw_A Alanine-glyoxylate amin 99.9 3.7E-26 1.3E-30 216.1 22.5 314 29-391 10-381 (385)
141 3lws_A Aromatic amino acid bet 99.9 3.1E-26 1.1E-30 214.6 21.0 287 58-390 46-352 (357)
142 1mdo_A ARNB aminotransferase; 99.9 7.4E-26 2.5E-30 214.8 23.2 307 57-392 37-384 (393)
143 2c81_A Glutamine-2-deoxy-scyll 99.9 3E-25 1E-29 212.6 27.3 304 61-391 44-411 (418)
144 3meb_A Aspartate aminotransfer 99.9 8.3E-26 2.8E-30 218.3 23.5 214 57-276 92-371 (448)
145 2zy4_A L-aspartate beta-decarb 99.9 5.6E-26 1.9E-30 223.8 21.6 169 55-229 133-338 (546)
146 1ajs_A Aspartate aminotransfer 99.9 2.9E-26 9.8E-31 219.1 18.3 213 57-276 72-344 (412)
147 3k7y_A Aspartate aminotransfer 99.9 2.2E-25 7.6E-30 211.7 24.1 215 51-274 66-333 (405)
148 2fnu_A Aminotransferase; prote 99.9 2.8E-25 9.7E-30 209.3 24.7 306 57-391 30-369 (375)
149 3ht4_A Aluminum resistance pro 99.9 2E-25 6.9E-30 213.4 23.7 256 56-328 62-344 (431)
150 1vef_A Acetylornithine/acetyl- 99.9 2.6E-27 8.9E-32 225.1 10.4 314 23-391 46-394 (395)
151 3nx3_A Acoat, acetylornithine 99.9 1.8E-26 6.1E-31 219.4 15.7 318 22-391 36-392 (395)
152 1yaa_A Aspartate aminotransfer 99.9 3E-26 1E-30 219.1 16.9 214 57-276 71-344 (412)
153 4adb_A Succinylornithine trans 99.9 1.2E-25 4.1E-30 214.3 20.7 321 22-390 39-396 (406)
154 2dkj_A Serine hydroxymethyltra 99.9 4.5E-26 1.6E-30 217.2 16.9 324 23-390 24-384 (407)
155 2ay1_A Aroat, aromatic amino a 99.9 1E-26 3.6E-31 220.8 11.1 212 58-275 68-328 (394)
156 2q7w_A Aspartate aminotransfer 99.9 6E-25 2E-29 208.8 22.4 214 57-276 67-332 (396)
157 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 1.6E-24 5.6E-29 208.6 25.6 313 56-392 59-434 (437)
158 2c0r_A PSAT, phosphoserine ami 99.9 1.4E-26 4.7E-31 217.5 10.2 276 60-391 50-358 (362)
159 1qz9_A Kynureninase; kynurenin 99.9 3.9E-25 1.3E-29 211.4 20.3 283 59-391 71-399 (416)
160 2pb2_A Acetylornithine/succiny 99.9 2.7E-26 9.3E-31 219.9 11.9 317 23-390 58-414 (420)
161 1w23_A Phosphoserine aminotran 99.9 1.5E-26 5.2E-31 216.9 9.0 275 60-391 49-357 (360)
162 3b8x_A WBDK, pyridoxamine 5-ph 99.9 3.2E-24 1.1E-28 203.4 24.9 304 57-387 32-389 (390)
163 2ord_A Acoat, acetylornithine 99.9 9.8E-26 3.4E-30 214.4 13.5 313 23-391 41-394 (397)
164 1sff_A 4-aminobutyrate aminotr 99.9 1E-25 3.6E-30 216.2 13.5 317 23-390 42-420 (426)
165 3e9k_A Kynureninase; kynurenin 99.9 3.9E-25 1.3E-29 214.6 17.3 287 59-391 111-458 (465)
166 1z7d_A Ornithine aminotransfer 99.9 2.5E-25 8.5E-30 213.9 14.9 314 23-390 66-425 (433)
167 3a9z_A Selenocysteine lyase; P 99.9 1.6E-24 5.4E-29 208.3 20.1 305 61-391 63-425 (432)
168 2ez2_A Beta-tyrosinase, tyrosi 99.9 3.7E-24 1.3E-28 207.3 22.1 197 24-234 44-283 (456)
169 2eo5_A 419AA long hypothetical 99.9 6.1E-25 2.1E-29 210.4 16.1 313 23-391 43-415 (419)
170 1svv_A Threonine aldolase; str 99.9 1.8E-24 6.2E-29 202.4 18.7 308 24-391 15-355 (359)
171 2oat_A Ornithine aminotransfer 99.9 5.6E-25 1.9E-29 211.8 15.4 317 23-391 77-436 (439)
172 3dxv_A Alpha-amino-epsilon-cap 99.9 2.7E-25 9.3E-30 214.2 12.6 316 22-390 43-421 (439)
173 1o69_A Aminotransferase; struc 99.9 8.2E-23 2.8E-27 194.0 28.3 304 59-392 32-385 (394)
174 2fyf_A PSAT, phosphoserine ami 99.9 1.3E-24 4.4E-29 206.8 15.4 315 28-391 44-395 (398)
175 3mad_A Sphingosine-1-phosphate 99.9 5.6E-24 1.9E-28 209.0 18.5 211 63-280 143-400 (514)
176 3mc6_A Sphingosine-1-phosphate 99.9 3.8E-24 1.3E-28 209.4 16.5 274 63-389 111-432 (497)
177 3ke3_A Putative serine-pyruvat 99.9 5.3E-23 1.8E-27 194.4 22.9 288 59-391 35-373 (379)
178 2dgk_A GAD-beta, GADB, glutama 99.9 2.3E-23 7.7E-28 201.5 20.1 289 62-391 84-431 (452)
179 2vi8_A Serine hydroxymethyltra 99.9 1.7E-23 5.9E-28 199.2 18.3 325 23-391 25-384 (405)
180 1s0a_A Adenosylmethionine-8-am 99.9 5.6E-24 1.9E-28 204.4 14.5 316 23-391 44-421 (429)
181 3ecd_A Serine hydroxymethyltra 99.9 5E-23 1.7E-27 197.2 20.5 286 64-390 83-393 (425)
182 3hbx_A GAD 1, glutamate decarb 99.9 2.7E-23 9.2E-28 203.2 18.8 286 63-390 99-440 (502)
183 3i4j_A Aminotransferase, class 99.9 6.7E-24 2.3E-28 203.9 14.3 321 22-390 29-424 (430)
184 2z67_A O-phosphoseryl-tRNA(SEC 99.9 2.6E-23 8.9E-28 201.1 18.1 286 60-391 134-455 (456)
185 3n0l_A Serine hydroxymethyltra 99.9 8.8E-23 3E-27 195.1 21.6 285 63-390 75-385 (417)
186 1wyu_B Glycine dehydrogenase s 99.9 1.2E-23 4E-28 204.6 14.7 284 61-391 109-438 (474)
187 2x3l_A ORN/Lys/Arg decarboxyla 99.9 4.3E-23 1.5E-27 198.9 15.9 155 56-222 54-226 (446)
188 3gbx_A Serine hydroxymethyltra 99.9 2.1E-22 7E-27 192.6 20.1 284 62-390 79-392 (420)
189 1ax4_A Tryptophanase; tryptoph 99.9 2.6E-22 9E-27 194.8 20.8 295 58-390 75-437 (467)
190 3a8u_X Omega-amino acid--pyruv 99.9 4.4E-23 1.5E-27 199.3 14.4 320 23-391 51-444 (449)
191 1rv3_A Serine hydroxymethyltra 99.9 1.2E-22 4.2E-27 197.7 17.5 280 62-390 93-427 (483)
192 3l44_A Glutamate-1-semialdehyd 99.9 6.3E-23 2.2E-27 197.3 13.6 244 22-275 55-342 (434)
193 1c4k_A Protein (ornithine deca 99.9 7.9E-21 2.7E-25 191.5 29.3 216 57-280 171-443 (730)
194 1zod_A DGD, 2,2-dialkylglycine 99.9 5.8E-22 2E-26 190.5 19.7 322 23-391 44-429 (433)
195 3n5m_A Adenosylmethionine-8-am 99.9 1.1E-22 3.9E-27 196.6 14.8 324 22-391 49-449 (452)
196 3oks_A 4-aminobutyrate transam 99.9 6.4E-23 2.2E-27 198.1 12.4 321 22-391 61-448 (451)
197 1js3_A DDC;, DOPA decarboxylas 99.9 1.2E-21 4.2E-26 191.1 21.5 286 59-391 109-471 (486)
198 4a6r_A Omega transaminase; tra 99.9 3.3E-22 1.1E-26 193.7 15.6 316 22-390 50-445 (459)
199 3h7f_A Serine hydroxymethyltra 99.9 4.5E-22 1.5E-26 192.1 16.4 206 62-276 93-321 (447)
200 4ffc_A 4-aminobutyrate aminotr 99.9 4.4E-22 1.5E-26 192.3 15.9 320 22-390 64-445 (453)
201 3vp6_A Glutamate decarboxylase 99.9 6.2E-21 2.1E-25 186.8 23.1 290 57-392 129-503 (511)
202 1wyu_A Glycine dehydrogenase ( 99.9 2.8E-21 9.4E-26 186.1 20.0 280 61-391 110-437 (438)
203 2qma_A Diaminobutyrate-pyruvat 99.9 3.4E-21 1.2E-25 188.4 20.9 281 64-391 145-493 (497)
204 3k28_A Glutamate-1-semialdehyd 99.9 1.4E-22 4.7E-27 194.7 10.7 243 22-275 53-339 (429)
205 2okj_A Glutamate decarboxylase 99.9 8E-21 2.7E-25 186.1 21.6 286 63-392 136-500 (504)
206 2epj_A Glutamate-1-semialdehyd 99.9 1.4E-22 4.9E-27 194.9 9.0 314 23-390 57-427 (434)
207 4h51_A Aspartate aminotransfer 99.9 1.2E-20 3.9E-25 179.4 21.4 214 57-276 85-351 (420)
208 3gju_A Putative aminotransfera 99.9 3.8E-20 1.3E-24 179.2 25.2 320 22-390 51-452 (460)
209 2cy8_A D-phgat, D-phenylglycin 99.9 1E-21 3.5E-26 190.0 14.0 246 23-275 58-343 (453)
210 3dod_A Adenosylmethionine-8-am 99.9 5E-22 1.7E-26 191.9 11.3 314 22-390 44-439 (448)
211 2jis_A Cysteine sulfinic acid 99.9 1.5E-20 5.1E-25 184.6 21.7 212 62-280 151-424 (515)
212 3tfu_A Adenosylmethionine-8-am 99.9 4.3E-21 1.5E-25 185.4 17.5 317 23-391 76-450 (457)
213 3fq8_A Glutamate-1-semialdehyd 99.9 8E-22 2.7E-26 189.2 12.2 313 22-391 52-424 (427)
214 3e77_A Phosphoserine aminotran 99.9 3.2E-21 1.1E-25 180.1 15.5 282 59-392 58-373 (377)
215 2e7u_A Glutamate-1-semialdehyd 99.9 1.2E-21 4E-26 187.9 12.8 312 23-390 53-423 (424)
216 3k40_A Aromatic-L-amino-acid d 99.9 1.8E-20 6.1E-25 182.0 20.7 287 58-391 108-468 (475)
217 4e77_A Glutamate-1-semialdehyd 99.9 2.2E-21 7.6E-26 186.3 13.3 316 22-391 53-426 (429)
218 4e1o_A HDC, histidine decarbox 99.9 2.2E-20 7.6E-25 181.7 20.2 288 57-391 112-475 (481)
219 3i5t_A Aminotransferase; pyrid 99.9 5.2E-21 1.8E-25 185.8 15.6 320 22-390 54-450 (476)
220 2vyc_A Biodegradative arginine 99.9 5.4E-20 1.9E-24 187.0 22.8 213 57-278 203-466 (755)
221 2a7v_A Serine hydroxymethyltra 99.8 1.7E-20 5.7E-25 181.3 15.8 281 65-390 106-437 (490)
222 3qm2_A Phosphoserine aminotran 99.8 1.4E-20 4.8E-25 176.8 14.8 279 58-392 71-383 (386)
223 3hmu_A Aminotransferase, class 99.8 4.6E-20 1.6E-24 178.9 18.8 317 22-390 55-448 (472)
224 2oqx_A Tryptophanase; lyase, p 99.8 6.3E-20 2.2E-24 178.0 19.1 296 58-390 73-438 (467)
225 2cjg_A L-lysine-epsilon aminot 99.8 4.1E-20 1.4E-24 178.4 15.8 313 23-391 55-445 (449)
226 3m5u_A Phosphoserine aminotran 99.8 3E-19 1E-23 166.2 20.0 275 59-392 50-358 (361)
227 2yky_A Beta-transaminase; tran 99.7 4.7E-22 1.6E-26 191.1 0.0 247 22-274 100-373 (465)
228 3n75_A LDC, lysine decarboxyla 99.8 5E-18 1.7E-22 169.8 18.9 211 57-277 193-443 (715)
229 1ohv_A 4-aminobutyrate aminotr 99.7 1.3E-16 4.4E-21 154.7 14.0 273 61-391 108-468 (472)
230 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 3.5E-14 1.2E-18 134.2 16.6 207 62-277 101-338 (450)
231 3hl2_A O-phosphoseryl-tRNA(SEC 99.5 6.1E-14 2.1E-18 130.9 10.7 196 72-276 129-355 (501)
232 4atq_A 4-aminobutyrate transam 99.5 2.4E-12 8.1E-17 123.3 22.1 290 57-390 105-451 (456)
233 3ou5_A Serine hydroxymethyltra 99.5 3.6E-12 1.2E-16 118.5 20.8 239 65-327 106-391 (490)
234 4ao9_A Beta-phenylalanine amin 99.4 6.9E-13 2.3E-17 126.6 13.6 209 58-274 126-359 (454)
235 4a0g_A Adenosylmethionine-8-am 99.4 3.1E-12 1E-16 131.1 13.7 206 134-391 577-825 (831)
236 4e3q_A Pyruvate transaminase; 99.3 1.5E-10 5E-15 111.3 22.0 213 58-275 110-382 (473)
237 3ic5_A Putative saccharopine d 71.2 25 0.00087 25.1 8.8 89 77-178 8-97 (118)
238 3dr5_A Putative O-methyltransf 69.2 47 0.0016 27.4 11.0 120 58-185 38-167 (221)
239 2orv_A Thymidine kinase; TP4A 56.5 14 0.00048 31.2 4.8 94 84-185 33-127 (234)
240 3l77_A Short-chain alcohol deh 55.1 33 0.0011 28.4 7.2 79 77-155 4-92 (235)
241 1tks_A 3,4-dihydroxy-2-butanon 53.7 17 0.00057 29.9 4.6 37 142-179 158-194 (204)
242 3v2g_A 3-oxoacyl-[acyl-carrier 52.0 39 0.0013 28.9 7.3 76 76-151 32-117 (271)
243 3ruf_A WBGU; rossmann fold, UD 50.7 91 0.0031 27.4 9.8 76 75-151 25-108 (351)
244 1qyd_A Pinoresinol-lariciresin 50.4 58 0.002 28.1 8.3 95 77-174 6-107 (313)
245 3osu_A 3-oxoacyl-[acyl-carrier 49.8 42 0.0014 28.1 7.0 76 76-151 5-90 (246)
246 4dmm_A 3-oxoacyl-[acyl-carrier 49.4 39 0.0013 28.9 6.8 76 76-151 29-114 (269)
247 3c85_A Putative glutathione-re 49.0 77 0.0026 24.9 8.2 94 76-179 41-137 (183)
248 1lss_A TRK system potassium up 48.9 60 0.002 23.9 7.2 87 77-172 7-93 (140)
249 3fwz_A Inner membrane protein 48.6 46 0.0016 25.0 6.4 74 76-154 9-82 (140)
250 3is3_A 17BETA-hydroxysteroid d 48.5 37 0.0013 28.9 6.6 66 76-141 19-88 (270)
251 4iin_A 3-ketoacyl-acyl carrier 48.3 52 0.0018 28.0 7.5 77 76-152 30-116 (271)
252 3llv_A Exopolyphosphatase-rela 47.8 62 0.0021 24.1 7.1 73 76-153 8-80 (141)
253 3dm5_A SRP54, signal recogniti 47.6 1.8E+02 0.006 27.1 11.8 123 61-184 76-225 (443)
254 3rwb_A TPLDH, pyridoxal 4-dehy 46.0 49 0.0017 27.7 6.8 76 76-155 7-92 (247)
255 3dhn_A NAD-dependent epimerase 45.1 92 0.0031 25.2 8.4 68 77-151 6-75 (227)
256 3i6i_A Putative leucoanthocyan 44.9 38 0.0013 30.0 6.3 93 77-174 12-110 (346)
257 3tfw_A Putative O-methyltransf 44.5 1.4E+02 0.0047 24.9 10.7 119 59-185 49-174 (248)
258 4fc7_A Peroxisomal 2,4-dienoyl 42.8 48 0.0017 28.3 6.4 76 76-151 28-113 (277)
259 3i4f_A 3-oxoacyl-[acyl-carrier 42.8 50 0.0017 27.8 6.5 75 76-150 8-92 (264)
260 3l4b_C TRKA K+ channel protien 42.7 83 0.0028 25.6 7.6 73 77-153 3-75 (218)
261 2jl1_A Triphenylmethane reduct 42.5 77 0.0026 26.9 7.7 91 78-175 3-99 (287)
262 3gk3_A Acetoacetyl-COA reducta 42.4 74 0.0025 26.9 7.5 77 76-152 26-112 (269)
263 3pxx_A Carveol dehydrogenase; 42.3 57 0.002 27.8 6.8 29 76-104 11-41 (287)
264 3tla_A MCCF; serine protease, 41.9 69 0.0024 29.0 7.4 68 94-161 40-127 (371)
265 3e48_A Putative nucleoside-dip 41.8 45 0.0015 28.5 6.1 91 78-175 3-98 (289)
266 1uls_A Putative 3-oxoacyl-acyl 40.9 71 0.0024 26.6 7.1 71 76-150 6-84 (245)
267 3grp_A 3-oxoacyl-(acyl carrier 40.6 53 0.0018 28.0 6.2 72 76-151 28-109 (266)
268 4dqx_A Probable oxidoreductase 40.1 43 0.0015 28.7 5.6 74 76-153 28-111 (277)
269 3tr6_A O-methyltransferase; ce 40.0 1.3E+02 0.0044 24.3 8.5 120 59-186 50-179 (225)
270 3e2i_A Thymidine kinase; Zn-bi 39.8 49 0.0017 27.5 5.5 97 84-185 42-139 (219)
271 3v2h_A D-beta-hydroxybutyrate 39.5 91 0.0031 26.6 7.7 78 76-153 26-114 (281)
272 2g1u_A Hypothetical protein TM 39.1 91 0.0031 23.7 6.9 96 76-181 21-118 (155)
273 4iiu_A 3-oxoacyl-[acyl-carrier 38.9 81 0.0028 26.6 7.2 74 76-150 27-111 (267)
274 4fgs_A Probable dehydrogenase 38.9 34 0.0012 29.5 4.7 62 76-141 30-95 (273)
275 3l9w_A Glutathione-regulated p 38.8 85 0.0029 28.9 7.6 94 76-179 6-100 (413)
276 1pjq_A CYSG, siroheme synthase 38.7 72 0.0024 29.8 7.2 93 76-183 14-107 (457)
277 2zcu_A Uncharacterized oxidore 38.6 57 0.0019 27.7 6.2 89 78-172 2-94 (286)
278 3u5t_A 3-oxoacyl-[acyl-carrier 38.5 54 0.0018 27.9 5.9 66 76-141 28-97 (267)
279 3qlj_A Short chain dehydrogena 38.2 1.2E+02 0.0041 26.5 8.4 66 76-141 28-106 (322)
280 1zk4_A R-specific alcohol dehy 38.0 1.2E+02 0.004 25.1 8.0 77 76-152 7-91 (251)
281 3pgx_A Carveol dehydrogenase; 37.7 87 0.003 26.6 7.3 77 76-152 16-114 (280)
282 3oid_A Enoyl-[acyl-carrier-pro 37.0 88 0.003 26.3 7.1 75 76-151 5-90 (258)
283 4h1h_A LMO1638 protein; MCCF-l 36.9 67 0.0023 28.5 6.4 69 93-161 8-96 (327)
284 3u81_A Catechol O-methyltransf 36.8 1.5E+02 0.0052 23.9 8.4 122 59-185 44-174 (221)
285 2uvd_A 3-oxoacyl-(acyl-carrier 36.2 89 0.003 25.9 6.9 75 76-151 5-90 (246)
286 3ijr_A Oxidoreductase, short c 36.1 37 0.0013 29.4 4.5 66 76-141 48-117 (291)
287 3ksu_A 3-oxoacyl-acyl carrier 36.0 1.3E+02 0.0044 25.3 8.0 66 76-141 12-83 (262)
288 3tpc_A Short chain alcohol deh 35.6 67 0.0023 27.0 6.1 71 76-150 8-88 (257)
289 3r3h_A O-methyltransferase, SA 35.6 63 0.0021 27.1 5.8 119 59-185 46-174 (242)
290 3dfz_A SIRC, precorrin-2 dehyd 35.5 98 0.0034 25.7 6.8 90 76-181 33-123 (223)
291 1sui_A Caffeoyl-COA O-methyltr 35.4 1.9E+02 0.0066 24.0 10.9 119 59-185 65-194 (247)
292 3qvo_A NMRA family protein; st 35.1 96 0.0033 25.5 6.9 89 76-172 24-115 (236)
293 4g81_D Putative hexonate dehyd 34.7 1.4E+02 0.0047 25.3 7.8 64 76-140 10-77 (255)
294 4e5s_A MCCFLIKE protein (BA_56 34.7 83 0.0028 28.0 6.6 69 93-161 8-96 (331)
295 3gvc_A Oxidoreductase, probabl 34.5 46 0.0016 28.6 4.9 73 76-152 30-112 (277)
296 3gem_A Short chain dehydrogena 34.4 52 0.0018 27.9 5.2 71 76-150 28-106 (260)
297 2avd_A Catechol-O-methyltransf 34.4 1.8E+02 0.0062 23.4 9.1 119 59-185 55-183 (229)
298 3m1a_A Putative dehydrogenase; 34.2 55 0.0019 27.9 5.4 73 76-152 6-88 (281)
299 1ywx_A 30S ribosomal protein S 34.2 29 0.00099 25.0 2.8 24 57-80 28-52 (102)
300 4e6p_A Probable sorbitol dehyd 34.2 51 0.0017 27.8 5.1 73 76-152 9-91 (259)
301 3ezl_A Acetoacetyl-COA reducta 33.8 77 0.0026 26.5 6.2 65 76-141 14-83 (256)
302 3guy_A Short-chain dehydrogena 33.6 64 0.0022 26.5 5.5 71 77-151 3-80 (230)
303 3afn_B Carbonyl reductase; alp 33.5 1.3E+02 0.0043 24.9 7.5 76 76-151 8-93 (258)
304 2v94_A RPS24, 30S ribosomal pr 33.4 32 0.0011 25.0 3.0 25 56-80 36-61 (107)
305 1xn9_A 30S ribosomal protein S 33.4 31 0.0011 24.8 2.9 24 57-80 28-52 (101)
306 1g0o_A Trihydroxynaphthalene r 33.4 1.1E+02 0.0037 26.1 7.2 76 76-151 30-115 (283)
307 4egf_A L-xylulose reductase; s 33.3 67 0.0023 27.2 5.7 77 76-152 21-107 (266)
308 3sr3_A Microcin immunity prote 33.2 95 0.0033 27.6 6.8 69 93-161 9-97 (336)
309 4ibo_A Gluconate dehydrogenase 33.2 1.1E+02 0.0039 25.8 7.2 75 76-151 27-111 (271)
310 3edm_A Short chain dehydrogena 33.1 99 0.0034 26.0 6.8 65 76-141 9-78 (259)
311 3tsc_A Putative oxidoreductase 32.9 1.1E+02 0.0036 26.0 7.0 28 76-103 12-41 (277)
312 3s55_A Putative short-chain de 32.8 1.1E+02 0.0038 25.9 7.2 30 76-105 11-42 (281)
313 3h7a_A Short chain dehydrogena 32.7 1.5E+02 0.0053 24.6 7.9 65 76-141 8-76 (252)
314 3tha_A Tryptophan synthase alp 32.6 93 0.0032 26.5 6.3 62 98-160 118-181 (252)
315 3kts_A Glycerol uptake operon 32.6 73 0.0025 25.8 5.3 43 131-179 17-59 (192)
316 3rd5_A Mypaa.01249.C; ssgcid, 32.5 49 0.0017 28.5 4.7 70 76-149 17-92 (291)
317 3ged_A Short-chain dehydrogena 32.4 1.8E+02 0.0061 24.5 8.1 61 76-140 3-66 (247)
318 3ppi_A 3-hydroxyacyl-COA dehyd 32.4 49 0.0017 28.3 4.7 61 76-140 31-95 (281)
319 1g57_A DHBP synthase, 3,4-dihy 32.3 83 0.0028 26.1 5.7 35 143-179 167-201 (217)
320 3rih_A Short chain dehydrogena 32.3 1.7E+02 0.0059 25.1 8.3 76 76-152 42-128 (293)
321 1xgk_A Nitrogen metabolite rep 32.2 1.5E+02 0.005 26.4 8.0 94 77-174 7-103 (352)
322 3rkr_A Short chain oxidoreduct 32.0 1.3E+02 0.0045 25.2 7.4 76 76-152 30-115 (262)
323 3dii_A Short-chain dehydrogena 31.7 1.3E+02 0.0045 24.9 7.3 72 77-152 4-84 (247)
324 1vb5_A Translation initiation 31.5 2.5E+02 0.0085 24.1 10.6 102 71-179 106-216 (276)
325 3mio_A DHBP synthase, 3,4-dihy 31.4 78 0.0027 26.0 5.3 36 143-179 158-194 (206)
326 3l6e_A Oxidoreductase, short-c 31.3 62 0.0021 26.8 5.0 73 77-153 5-87 (235)
327 3pk0_A Short-chain dehydrogena 31.2 1.2E+02 0.004 25.5 7.0 76 76-152 11-97 (262)
328 2q2v_A Beta-D-hydroxybutyrate 31.2 1.8E+02 0.006 24.2 8.1 73 76-151 5-87 (255)
329 3u9l_A 3-oxoacyl-[acyl-carrier 31.1 1.3E+02 0.0046 26.3 7.5 77 76-152 6-96 (324)
330 3gdg_A Probable NADP-dependent 31.1 99 0.0034 25.9 6.5 76 76-151 21-109 (267)
331 3tfo_A Putative 3-oxoacyl-(acy 31.0 1.5E+02 0.0051 25.0 7.5 77 76-153 5-91 (264)
332 3efb_A Probable SOR-operon reg 31.0 1.5E+02 0.005 25.3 7.4 23 60-82 12-34 (266)
333 3uf0_A Short-chain dehydrogena 30.9 2.1E+02 0.0072 24.1 8.6 74 76-151 32-114 (273)
334 1x1t_A D(-)-3-hydroxybutyrate 30.9 1.3E+02 0.0044 25.1 7.2 76 76-151 5-91 (260)
335 1gee_A Glucose 1-dehydrogenase 30.2 1.4E+02 0.0048 24.8 7.2 75 76-151 8-93 (261)
336 3oec_A Carveol dehydrogenase ( 30.0 1.3E+02 0.0044 26.2 7.1 77 76-152 47-144 (317)
337 3o38_A Short chain dehydrogena 29.7 97 0.0033 26.0 6.1 77 76-152 23-110 (266)
338 1xx6_A Thymidine kinase; NESG, 29.4 78 0.0027 25.5 5.1 92 84-180 22-114 (191)
339 3lyl_A 3-oxoacyl-(acyl-carrier 29.4 1.2E+02 0.0041 25.0 6.6 75 76-151 6-90 (247)
340 4da9_A Short-chain dehydrogena 29.3 48 0.0016 28.5 4.1 76 76-151 30-115 (280)
341 3kvo_A Hydroxysteroid dehydrog 29.3 2.4E+02 0.0082 25.0 8.9 76 76-151 46-137 (346)
342 3imf_A Short chain dehydrogena 29.2 1.6E+02 0.0053 24.6 7.3 75 76-151 7-91 (257)
343 3mje_A AMPHB; rossmann fold, o 29.0 92 0.0032 29.5 6.3 66 76-141 240-312 (496)
344 3tnl_A Shikimate dehydrogenase 29.0 1.7E+02 0.0059 25.7 7.7 77 76-153 156-236 (315)
345 1hxh_A 3BETA/17BETA-hydroxyste 28.9 1.3E+02 0.0043 25.1 6.7 72 76-151 7-88 (253)
346 3duw_A OMT, O-methyltransferas 28.8 2.3E+02 0.0077 22.7 9.8 119 59-185 44-171 (223)
347 1ja9_A 4HNR, 1,3,6,8-tetrahydr 28.8 1E+02 0.0036 25.8 6.2 66 76-141 22-91 (274)
348 1vhx_A Putative holliday junct 28.7 1E+02 0.0035 23.8 5.4 53 132-185 43-102 (150)
349 3sc4_A Short chain dehydrogena 28.7 1.5E+02 0.0051 25.3 7.2 78 76-153 10-103 (285)
350 1edo_A Beta-keto acyl carrier 28.6 1.3E+02 0.0044 24.7 6.6 74 77-151 3-87 (244)
351 2q5c_A NTRC family transcripti 28.5 2.3E+02 0.0079 22.7 10.8 98 62-170 17-117 (196)
352 2yxb_A Coenzyme B12-dependent 28.4 1.1E+02 0.0038 23.8 5.7 74 106-181 30-107 (161)
353 3m2p_A UDP-N-acetylglucosamine 28.4 1.8E+02 0.0061 24.9 7.8 86 77-172 4-99 (311)
354 2ew8_A (S)-1-phenylethanol deh 28.4 1.3E+02 0.0044 25.0 6.6 73 76-151 8-90 (249)
355 3sx2_A Putative 3-ketoacyl-(ac 28.3 1.2E+02 0.004 25.7 6.4 29 76-104 14-44 (278)
356 3mw8_A Uroporphyrinogen-III sy 28.2 41 0.0014 28.1 3.4 54 97-153 1-60 (240)
357 3d3w_A L-xylulose reductase; u 28.0 2.4E+02 0.0082 23.0 8.3 71 76-150 8-83 (244)
358 1cyd_A Carbonyl reductase; sho 28.0 2.2E+02 0.0076 23.1 8.1 72 76-151 8-84 (244)
359 2cfc_A 2-(R)-hydroxypropyl-COM 28.0 1.4E+02 0.0047 24.6 6.8 75 77-151 4-88 (250)
360 2g1d_A 30S ribosomal protein S 27.9 29 0.00099 24.8 1.9 25 56-80 28-53 (98)
361 3c1o_A Eugenol synthase; pheny 27.7 1.3E+02 0.0045 25.9 6.8 91 78-174 7-104 (321)
362 2c07_A 3-oxoacyl-(acyl-carrier 27.7 2.1E+02 0.0072 24.2 8.1 75 76-151 45-129 (285)
363 3sju_A Keto reductase; short-c 27.6 1.4E+02 0.0048 25.3 6.9 76 76-152 25-110 (279)
364 3c3y_A Pfomt, O-methyltransfer 27.5 2.6E+02 0.0087 23.0 9.5 119 59-185 56-185 (237)
365 2hq1_A Glucose/ribitol dehydro 27.4 76 0.0026 26.2 5.0 74 76-150 6-90 (247)
366 3phh_A Shikimate dehydrogenase 27.4 2.5E+02 0.0086 23.9 8.3 94 73-184 117-211 (269)
367 4hp8_A 2-deoxy-D-gluconate 3-d 27.3 1.2E+02 0.004 25.7 6.0 64 76-142 10-77 (247)
368 2r6j_A Eugenol synthase 1; phe 27.3 1.2E+02 0.004 26.3 6.4 91 77-174 13-106 (318)
369 4e3z_A Putative oxidoreductase 27.3 94 0.0032 26.3 5.6 74 76-150 27-111 (272)
370 3enk_A UDP-glucose 4-epimerase 27.2 82 0.0028 27.5 5.4 78 76-153 6-88 (341)
371 4eso_A Putative oxidoreductase 27.2 64 0.0022 27.2 4.5 61 76-140 9-73 (255)
372 3uve_A Carveol dehydrogenase ( 27.1 1.7E+02 0.006 24.7 7.4 29 76-104 12-42 (286)
373 3icc_A Putative 3-oxoacyl-(acy 27.0 1.8E+02 0.006 24.0 7.3 64 76-140 8-76 (255)
374 3t7c_A Carveol dehydrogenase; 26.9 1.6E+02 0.0055 25.3 7.2 29 76-104 29-59 (299)
375 3r1i_A Short-chain type dehydr 26.9 2.5E+02 0.0085 23.7 8.3 75 76-151 33-117 (276)
376 3op4_A 3-oxoacyl-[acyl-carrier 26.9 81 0.0028 26.3 5.0 72 76-151 10-91 (248)
377 3tjr_A Short chain dehydrogena 26.6 1.4E+02 0.0047 25.8 6.6 76 76-152 32-117 (301)
378 3hvm_A Agmatine deiminase; hyd 26.5 31 0.0011 30.7 2.3 48 54-101 163-217 (330)
379 3vnd_A TSA, tryptophan synthas 26.5 1.7E+02 0.0057 25.1 6.9 61 98-159 125-187 (267)
380 1vl8_A Gluconate 5-dehydrogena 26.5 1.1E+02 0.0039 25.7 6.0 76 76-151 22-107 (267)
381 3ak4_A NADH-dependent quinucli 26.3 1.7E+02 0.0059 24.3 7.1 72 76-151 13-94 (263)
382 3e03_A Short chain dehydrogena 26.2 2.1E+02 0.0071 24.1 7.7 76 76-151 7-98 (274)
383 1hdc_A 3-alpha, 20 beta-hydrox 26.2 1.1E+02 0.0039 25.5 5.9 72 76-151 6-87 (254)
384 1snn_A DHBP synthase, 3,4-dihy 26.1 71 0.0024 26.6 4.2 35 143-179 178-212 (227)
385 2gas_A Isoflavone reductase; N 25.8 1.4E+02 0.0049 25.4 6.7 50 120-174 54-103 (307)
386 1h5q_A NADP-dependent mannitol 25.3 1.2E+02 0.0042 25.2 6.0 66 76-141 15-84 (265)
387 1xkn_A Putative peptidyl-argin 25.0 51 0.0017 29.7 3.4 124 54-181 179-327 (355)
388 3re1_A Uroporphyrinogen-III sy 24.9 42 0.0014 28.7 2.9 56 96-153 13-76 (269)
389 2pnf_A 3-oxoacyl-[acyl-carrier 24.9 1.3E+02 0.0043 24.8 5.9 75 76-151 8-93 (248)
390 1iuk_A Hypothetical protein TT 24.8 85 0.0029 23.7 4.3 35 143-185 94-128 (140)
391 3r3s_A Oxidoreductase; structu 24.7 87 0.003 27.0 5.0 75 76-150 50-135 (294)
392 2hmt_A YUAA protein; RCK, KTN, 24.7 1.7E+02 0.0058 21.3 6.1 88 76-172 8-95 (144)
393 3nav_A Tryptophan synthase alp 24.6 1.7E+02 0.0058 25.1 6.6 81 98-179 127-213 (271)
394 3cbg_A O-methyltransferase; cy 24.6 2.9E+02 0.0097 22.5 9.1 120 58-185 57-186 (232)
395 2xzm_P RPS24E; ribosome, trans 24.5 60 0.0021 25.0 3.2 25 56-80 30-55 (149)
396 3r6d_A NAD-dependent epimerase 24.4 1.1E+02 0.0036 24.8 5.2 88 77-172 7-98 (221)
397 4b79_A PA4098, probable short- 24.3 2.2E+02 0.0074 23.9 7.2 61 76-141 12-74 (242)
398 1xg5_A ARPG836; short chain de 24.2 3E+02 0.01 23.0 8.4 76 76-152 33-120 (279)
399 3nyw_A Putative oxidoreductase 24.2 1.5E+02 0.0053 24.6 6.3 66 76-141 8-79 (250)
400 2ehd_A Oxidoreductase, oxidore 23.9 2.2E+02 0.0074 23.1 7.2 72 76-151 6-86 (234)
401 2z1n_A Dehydrogenase; reductas 23.9 2.6E+02 0.0089 23.2 7.8 76 76-152 8-94 (260)
402 1y80_A Predicted cobalamin bin 23.9 2.2E+02 0.0075 23.0 7.1 76 106-183 100-180 (210)
403 3c3p_A Methyltransferase; NP_9 23.7 2.7E+02 0.0093 22.0 9.2 118 58-184 41-163 (210)
404 3un1_A Probable oxidoreductase 23.7 2.2E+02 0.0074 23.8 7.2 69 76-152 29-105 (260)
405 2qlc_A DNA repair protein RADC 23.7 85 0.0029 23.4 4.0 38 134-172 58-102 (126)
406 3awd_A GOX2181, putative polyo 23.6 2E+02 0.0068 23.7 7.0 75 76-151 14-98 (260)
407 2jah_A Clavulanic acid dehydro 23.5 1.8E+02 0.0063 24.0 6.7 75 76-151 8-92 (247)
408 1zbr_A AAQ65385, conserved hyp 23.4 55 0.0019 29.4 3.3 123 54-181 169-318 (349)
409 4dyv_A Short-chain dehydrogena 23.4 47 0.0016 28.4 2.9 71 76-150 29-109 (272)
410 1iv0_A Hypothetical protein; r 23.4 1.3E+02 0.0043 21.3 4.6 53 132-184 39-96 (98)
411 1ff9_A Saccharopine reductase; 23.4 3.2E+02 0.011 25.2 8.9 73 77-154 6-79 (450)
412 2b4q_A Rhamnolipids biosynthes 23.1 1.5E+02 0.005 25.2 6.0 74 76-151 30-113 (276)
413 3p19_A BFPVVD8, putative blue 23.1 1.8E+02 0.0062 24.5 6.6 61 76-141 17-79 (266)
414 3sxp_A ADP-L-glycero-D-mannohe 23.0 3.6E+02 0.012 23.5 9.0 75 76-151 11-98 (362)
415 2o1e_A YCDH; alpha-beta protei 23.0 1.9E+02 0.0064 25.3 6.8 68 96-178 189-266 (312)
416 2dt5_A AT-rich DNA-binding pro 22.9 1.4E+02 0.0047 24.5 5.5 105 61-185 64-175 (211)
417 3u5c_Y RP50, 40S ribosomal pro 22.8 48 0.0016 25.2 2.3 24 57-80 33-57 (135)
418 2ae2_A Protein (tropinone redu 22.7 2.5E+02 0.0085 23.3 7.5 75 76-151 10-95 (260)
419 2q1w_A Putative nucleotide sug 22.6 1.7E+02 0.0057 25.5 6.5 72 77-152 23-98 (333)
420 2bgk_A Rhizome secoisolaricire 22.6 1.2E+02 0.004 25.5 5.4 75 76-150 17-99 (278)
421 3qiv_A Short-chain dehydrogena 22.5 2.2E+02 0.0075 23.4 7.0 74 76-150 10-93 (253)
422 3lf2_A Short chain oxidoreduct 22.4 1.8E+02 0.006 24.4 6.4 78 76-153 9-97 (265)
423 1id1_A Putative potassium chan 22.4 2.5E+02 0.0084 21.0 7.4 98 76-179 5-103 (153)
424 1zl0_A Hypothetical protein PA 22.3 1.9E+02 0.0066 25.3 6.7 69 93-161 13-98 (311)
425 1geg_A Acetoin reductase; SDR 22.1 2.1E+02 0.0072 23.7 6.9 74 77-151 4-87 (256)
426 1qyc_A Phenylcoumaran benzylic 22.1 1.3E+02 0.0045 25.6 5.7 91 78-174 7-104 (308)
427 3dqp_A Oxidoreductase YLBE; al 22.0 3E+02 0.01 21.9 9.2 87 78-172 3-96 (219)
428 3gi1_A LBP, laminin-binding pr 21.8 1.5E+02 0.0052 25.5 5.9 68 96-178 178-255 (286)
429 2jli_A YSCU, YOP proteins tran 21.7 88 0.003 23.3 3.6 22 162-184 73-94 (123)
430 3a28_C L-2.3-butanediol dehydr 21.6 2E+02 0.0067 23.9 6.5 75 77-151 4-89 (258)
431 3f9i_A 3-oxoacyl-[acyl-carrier 21.4 93 0.0032 25.8 4.4 71 76-150 15-91 (249)
432 3ai3_A NADPH-sorbose reductase 21.4 1.5E+02 0.0051 24.7 5.7 75 76-151 8-93 (263)
433 2aef_A Calcium-gated potassium 21.3 3.3E+02 0.011 22.1 7.9 94 76-181 11-105 (234)
434 1yxm_A Pecra, peroxisomal tran 21.1 2.6E+02 0.0088 23.8 7.4 76 76-151 19-108 (303)
435 2j9r_A Thymidine kinase; TK1, 21.1 1.8E+02 0.006 24.0 5.8 70 84-154 42-112 (214)
436 2a4k_A 3-oxoacyl-[acyl carrier 21.1 1.3E+02 0.0045 25.3 5.3 71 76-150 7-87 (263)
437 3qtp_A Enolase 1; glycolysis, 20.9 2.3E+02 0.0078 26.3 7.0 91 88-181 286-380 (441)
438 3gaf_A 7-alpha-hydroxysteroid 20.9 1.8E+02 0.0062 24.2 6.1 75 76-151 13-97 (256)
439 2jlj_A YSCU, YOP proteins tran 20.8 80 0.0027 24.2 3.3 22 162-184 82-103 (144)
440 4es6_A Uroporphyrinogen-III sy 20.8 43 0.0015 28.3 2.1 56 96-153 5-68 (254)
441 4fn4_A Short chain dehydrogena 20.7 97 0.0033 26.3 4.3 64 76-140 8-75 (254)
442 3ioy_A Short-chain dehydrogena 20.7 2.1E+02 0.0072 24.9 6.7 65 76-141 9-79 (319)
443 1pq4_A Periplasmic binding pro 20.7 2.3E+02 0.0079 24.4 6.8 67 96-177 189-263 (291)
444 1gy8_A UDP-galactose 4-epimera 20.6 3.4E+02 0.012 24.0 8.4 76 77-152 4-102 (397)
445 1yb1_A 17-beta-hydroxysteroid 20.5 1.5E+02 0.0053 24.9 5.7 76 76-152 32-117 (272)
446 4id9_A Short-chain dehydrogena 20.5 2.7E+02 0.0091 24.2 7.5 63 77-151 21-85 (347)
447 1fmc_A 7 alpha-hydroxysteroid 20.4 1.7E+02 0.0058 24.1 5.9 75 76-151 12-96 (255)
448 3tzq_B Short-chain type dehydr 20.3 2E+02 0.0068 24.2 6.3 71 76-150 12-92 (271)
449 3m9w_A D-xylose-binding peripl 20.2 2E+02 0.0067 24.6 6.4 71 105-181 15-91 (313)
450 2x9g_A PTR1, pteridine reducta 20.0 1.6E+02 0.0056 25.0 5.8 75 76-150 24-113 (288)
451 2ag5_A DHRS6, dehydrogenase/re 20.0 3E+02 0.01 22.5 7.3 72 76-151 7-82 (246)
452 1ae1_A Tropinone reductase-I; 20.0 2.9E+02 0.01 23.1 7.4 75 76-151 22-107 (273)
No 1
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=100.00 E-value=1.6e-53 Score=405.27 Aligned_cols=382 Identities=47% Similarity=0.808 Sum_probs=342.8
Q ss_pred CCCCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccH
Q psy12791 4 LPQDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSG 83 (393)
Q Consensus 4 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G 83 (393)
|.+.+++.|.++|+|..++... ++..+|++++++|.....+. ...+.|+|+++|...+|+++||++.|.++.++++||
T Consensus 14 ~~~~~~~~t~~~~~~~~~~~~~-~~~~~pi~~~s~~~~~~~~~-~~~~~y~r~~~p~~~~l~~~la~l~g~~~~~~~~sG 91 (400)
T 3nmy_A 14 GDRALSLATLAIHGGQSPDPST-GAVMPPIYATSTYAQSSPGE-HQGFEYSRTHNPTRFAYERCVAALEGGTRAFAFASG 91 (400)
T ss_dssp ---CCCHHHHHHHTTCCCCTTT-CBSSCCBCCCSBBBCSBTTB-SSSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEESSH
T ss_pred cccCCCcchheeeCCCCCCCCC-CCcCCCccccceeeccCccc-cCCcccccCCCHHHHHHHHHHHHHhCCCCEEEecCH
Confidence 4556789999999998876544 57888999999998776544 346889999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHh-cccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCH
Q psy12791 84 LGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQV-APKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDV 162 (393)
Q Consensus 84 ~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~-~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 162 (393)
++|+.++..++++||+|++++++|++++..+... ++..|++++.++.+|++++++++.+++++|++++|+||||.++|+
T Consensus 92 ~~Ai~~~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l 171 (400)
T 3nmy_A 92 MAATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDI 171 (400)
T ss_dssp HHHHHHHHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhccCCCEEEEECCCCCCCeeecH
Confidence 8888446778899999999999999887766666 677899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEE-EEEecChHHHHHHHHHHHhcCCCCC
Q psy12791 163 KAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMG-ATVTNDDSLQARLKFLQNSMGVVPS 241 (393)
Q Consensus 163 ~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G-~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (393)
++|.++|+++ |+++|+|++|+.+....++..++|+++.|+||+++|+....+| +++.+++++.++++......+...+
T Consensus 172 ~~i~~la~~~-g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~ 250 (400)
T 3nmy_A 172 AAIAVIARKH-GLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQG 250 (400)
T ss_dssp HHHHHHHHHT-TCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCC
T ss_pred HHHHHHHHHc-CCEEEEECCCcccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCC
Confidence 9999999999 9999999999987777777789999999999999654333456 5676668899999888888888899
Q ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHH
Q psy12791 242 PFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIF 321 (393)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
+..++++.+.++.+..+++++.++++.+.++|+++|.+..+.+|++++.+.+.++.++++++|++++|.++++.+...+|
T Consensus 251 ~~~a~~~l~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~ 330 (400)
T 3nmy_A 251 PFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRF 330 (400)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHH
T ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997556789999
Q ss_pred HHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 322 LESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 322 ~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
+++++.+.++.++|+.+|++++|..++|..++.+....+|+.+++||||+|.+++++++++|.+||+
T Consensus 331 ~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 331 CEKTELFTLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp HHHCSSSEECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred HHcCCcceEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999986
No 2
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.8e-53 Score=405.30 Aligned_cols=376 Identities=31% Similarity=0.508 Sum_probs=338.5
Q ss_pred CCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCC-------CCCCCccccCCCCchHHHHHHHHHHHhCCCcEEE
Q psy12791 7 DTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPG-------QPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLC 79 (393)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~-------~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~ 79 (393)
..++.|.++|+|..++. . ++..+|+++++++..+..+ .....+.|+||++|...+|++++|+++|.++.++
T Consensus 24 ~~~~~t~~~~~~~~~~~-~-~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~~~ 101 (414)
T 3ndn_A 24 GVSQATVGVRGGMLRSG-F-EETAEAMYLTSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFA 101 (414)
T ss_dssp TCCHHHHHHHTTCCCCT-T-CBSSCCBCCCSBBCCSSHHHHHHHHTTSSCCCCBTTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCccceeeecCCCCCC-C-CCcCCCcccCCceecCChHHHHHHHhCCcCCcCcCCCCChHHHHHHHHHHHHHCCCcEEE
Confidence 45799999999987643 2 5788999999999876531 1134688999999999999999999999989999
Q ss_pred eccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccc
Q psy12791 80 YSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMT 158 (393)
Q Consensus 80 ~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 158 (393)
+++|++|+ .++.+++++||+|++++|+|+++...+...++..|+++++++.+|++++++++++++++|++++|+||||.
T Consensus 102 ~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~t~~v~le~p~NptG~ 181 (414)
T 3ndn_A 102 TASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQS 181 (414)
T ss_dssp ESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSCCSEEEEESSCTTTCC
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCc
Confidence 99999998 77788899999999999999987766666667799999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHH-HHHHHHHhc
Q psy12791 159 VFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQA-RLKFLQNSM 236 (393)
Q Consensus 159 ~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~-~~~~~~~~~ 236 (393)
+.|+++|.++|+++ |+++|+|++|+.+....++..++|+++.|+||++ |.+| +++|+++++ ++.+. .++......
T Consensus 182 ~~~l~~i~~la~~~-g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l-~~~G~~~~G~vv~~-~~~~~~~l~~~~~~~ 258 (414)
T 3ndn_A 182 LVDIAAVTELAHAA-GAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHI-DGQGRVLGGAILGD-REYIDGPVQKLMRHT 258 (414)
T ss_dssp CCCHHHHHHHHHHT-TCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTT-TCSSCCCCEEEEEC-HHHHTTHHHHHHHHH
T ss_pred cccHHHHHHHHHHc-CCEEEEECCCcccccCCchhcCCCeEeccCCccc-cCCCCceEEEEEEC-HHHHHHHHHHHHHHc
Confidence 99999999999999 9999999999987766777788999999999999 4667 899999998 55554 677666677
Q ss_pred CCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC--
Q psy12791 237 GVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-- 314 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 314 (393)
+...++..++++.+.++.+..+++++.++++.+.++|+++|.+..+.+|++++.+.+.++.++++++|++++|.++++
T Consensus 259 g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~ 338 (414)
T 3ndn_A 259 GPAMSAFNAWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPED 338 (414)
T ss_dssp CCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCcc
Confidence 888899999999999999999999999999999999999999999999999999999999999999999999999765
Q ss_pred --HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 315 --AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 315 --~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
.+++.+|+++++.+++++++|+.+|+.++|+.++|..++.++...+|..+++||||+|.+++++++++|.++|
T Consensus 339 ~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~e~~~dli~dl~~al 413 (414)
T 3ndn_A 339 VAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADIDRAL 413 (414)
T ss_dssp GHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhh
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999987
No 3
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=100.00 E-value=5.3e-52 Score=395.95 Aligned_cols=387 Identities=57% Similarity=0.948 Sum_probs=333.1
Q ss_pred CCCCCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEecc
Q psy12791 3 FLPQDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSS 82 (393)
Q Consensus 3 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~ 82 (393)
+|++.++++|+++|+|..++....++..+|++.++++....... ...+.|+||++|...+||+++|+++|.++++++++
T Consensus 12 ~~~~~~~~~t~~~h~g~~~~~~~~~~~~~pi~~stt~~~~~~~~-~~~~~y~r~~~p~~~~l~~~la~~~g~~~~i~~~s 90 (403)
T 3cog_A 12 FLPHFQHFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQ-HSGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFAS 90 (403)
T ss_dssp CCCCCTTHHHHHHHTTCCGGGSTTCBSSCCBCCCSCBCCC---------------CHHHHHHHHHHHHHHTCSEEEEESC
T ss_pred hhcccCCcccEEEeCCCCCCcCCCCCccCCeeccceeecCCccc-cCCCcccCCCCchHHHHHHHHHHHhCCCcEEEECC
Confidence 36666789999999998765543147899999999887655433 22477999999999999999999999989999999
Q ss_pred HHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC
Q psy12791 83 GLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD 161 (393)
Q Consensus 83 G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 161 (393)
|++++ .++. ++++||+|++++|+|++++..+...++..|++++.++.+|++++++.+++++++|++++|+||||.++|
T Consensus 91 G~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~t~~v~~~~p~nptG~~~~ 169 (403)
T 3cog_A 91 GLAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVID 169 (403)
T ss_dssp HHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeeeC
Confidence 99778 6666 889999999999999987777777778899999999999999999999989999999999999999999
Q ss_pred HHHHHHHHHhCCC-cEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCC
Q psy12791 162 VKAISAVVKQHPD-ILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVP 240 (393)
Q Consensus 162 ~~~l~~l~~~~~~-~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 240 (393)
+++|.++|+++ | +++|+|++|+.+....++..++|++++|+||+++|+.|+|+||++++++++.+.++.....++...
T Consensus 170 l~~i~~la~~~-g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~ 248 (403)
T 3cog_A 170 IEGCAHIVHKH-GDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVP 248 (403)
T ss_dssp HHHHHHHHTSS-SCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHc-CCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCC
Confidence 99999999999 9 999999999998766777788999999999999767777899999976889898887777778888
Q ss_pred CHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHH
Q psy12791 241 SPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRI 320 (393)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
++..++++.+.++.+..+++++.++...+.+++++++.+..+.++++++.+.+.++.+...+.++++.|.+++..+...+
T Consensus 249 ~~~~~~~~~~~l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 328 (403)
T 3cog_A 249 SPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEI 328 (403)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCHHHHHH
T ss_pred CHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCHHHHHH
Confidence 89999888889999988999999999999999999999999999999988888888887778899999999656678889
Q ss_pred HHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 321 FLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 321 ~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
+++.++++..+.++|+.+|+.+.|..+.|...+.+.....|..+++||||+|.++++++++++.++|+++.+
T Consensus 329 ~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~~~ 400 (403)
T 3cog_A 329 FLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAAHP 400 (403)
T ss_dssp HHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHCC
T ss_pred HHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHhhc
Confidence 999999888899999999999999888888888888888888889999999999999999999999987653
No 4
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=100.00 E-value=1.9e-51 Score=390.92 Aligned_cols=373 Identities=42% Similarity=0.700 Sum_probs=336.3
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV- 87 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al- 87 (393)
++.|.++|+|..++... ++..+|+..++++..+........+.|+|++++...++++++|+++|.++.+++++|++++
T Consensus 17 ~~~t~~~~~~~~~~~~~-~~~~~pi~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~la~~~g~~~~~~~~sGt~A~~ 95 (392)
T 3qhx_A 17 GLATRAIHSGYRPDPAT-GAVNAPIYASSTFAQDGVGGLRGGYEYARTGNPTRTALEAALAAVEDAAFGRAFSSGMAAAD 95 (392)
T ss_dssp CHHHHHHHSSCCCCTTT-CBSSCCBCCCSBBCCSSTTCCBTTBCBTTTCCHHHHHHHHHHHHHTTCSEEEEESSHHHHHH
T ss_pred CcchhheeCCCCCCCCC-CCccCCcccCcceEecCcccccCCccccCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHH
Confidence 68999999998876544 4788899999998877665544578999999999999999999999999999999999888
Q ss_pred HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHH
Q psy12791 88 TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISA 167 (393)
Q Consensus 88 ~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~ 167 (393)
.++..++++||+|+++.++|++++..+...++..|++++.++.+|++++++++.+++++|++++|+||||.+.|+++|.+
T Consensus 96 ~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~ 175 (392)
T 3qhx_A 96 CALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQ 175 (392)
T ss_dssp HHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHH
T ss_pred HHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHH
Confidence 77777889999999999999987777777778899999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHH
Q psy12791 168 VVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCW 246 (393)
Q Consensus 168 l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
+|+++ |+++|+|++|+.++...+...++|+++.|+||+++ .+| +|+||++++++++.+.++......+...++..++
T Consensus 176 la~~~-g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg-~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~ 253 (392)
T 3qhx_A 176 LGADS-SAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIG-GHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAY 253 (392)
T ss_dssp HHHHH-TCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTT-CSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHH
T ss_pred HHHHc-CCEEEEECCCcccccCChHHhCCcEEEEcCccccC-CCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHH
Confidence 99999 99999999999877667777789999999999995 555 8999999987789998888877788889999999
Q ss_pred HHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcC
Q psy12791 247 LVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLL 326 (393)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 326 (393)
++.+.++.+..+++++.++.+.+.++|+.+|.+..+.+|+++..+.+.++.+.+++.|++++|.++++.+..++|++.++
T Consensus 254 ~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~ 333 (392)
T 3qhx_A 254 LTMRGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTN 333 (392)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCS
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCC
Confidence 99999999998999999999999999999999999999999999999999999999999999999766788999999999
Q ss_pred ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 327 IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 327 ~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
..++++++|+.+++.+.|..+++..++.+ .+|..++.||||+|.++++++++++.++|
T Consensus 334 ~~~~~~s~G~~~sl~~~~~~~~~~~~~~~---~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 334 IFILAESLGSVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp SSEECSCCCCSSCEEECGGGTSCGGGBTT---BCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred CceECCCCCCCCceeeCcccccccccCHH---HcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 99999999999999988887777765544 67888999999999999999999999987
No 5
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=100.00 E-value=1.4e-52 Score=401.30 Aligned_cols=376 Identities=31% Similarity=0.468 Sum_probs=296.5
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCC-------CCCccccCCCCchHHHHHHHHHHHhCCCcEEEec
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQP-------PQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYS 81 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-------~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~ 81 (393)
+|.|.++|+|..+++.. ++..+|++++++|..+..+.. ...+.|+|+++|...+|++++|+++|.+++++++
T Consensus 26 ~~~t~~~h~~~~~~~~~-~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~ 104 (430)
T 3ri6_A 26 GFTTRALHVPKAKRDVH-GALRTPVYDNAAFEFENSDEIAQVSLGRALGHVYSRSSNPTVEDLEQRLKNLTGALGVLALG 104 (430)
T ss_dssp CHHHHHHCCC---------------------------------------------CCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CcchhheeCCCCCCCCC-CCcCCCcccccccccCCHHHHHHHhhcccCCccccCCCCHHHHHHHHHHHHHHCCCcEEEEC
Confidence 38999999998776543 478889999999887654321 2357899999999999999999999999999999
Q ss_pred cHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccccc
Q psy12791 82 SGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 82 ~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 160 (393)
||++|+ .++.+++++||+|++++++|++++..+...++..|++++.++.+|++++++++++++++|++++|+||||.++
T Consensus 105 sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~~ 184 (430)
T 3ri6_A 105 SGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQVA 184 (430)
T ss_dssp CHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCCeec
Confidence 999888 7778889999999999999998877666677889999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecCh-HH--------------
Q psy12791 161 DVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDD-SL-------------- 225 (393)
Q Consensus 161 ~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~-~~-------------- 225 (393)
|+++|.++|+++ |+++|+|++|+.+....+...++|+++.|+||+++|+....+|+++.+.. .+
T Consensus 185 dl~~i~~la~~~-g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g 263 (430)
T 3ri6_A 185 DLEALSKVVHAK-GIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAG 263 (430)
T ss_dssp CHHHHHHHHHTT-TCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHG
T ss_pred CHHHHHHHHHHc-CCEEEEECCCcccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhc
Confidence 999999999999 99999999999887777777889999999999996544445777774322 11
Q ss_pred ----HHHHH-HHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhc
Q psy12791 226 ----QARLK-FLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQW 300 (393)
Q Consensus 226 ----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~ 300 (393)
+++++ ......+...++..++++.++++.+..+++++.++++.+.++|+++|.+.++.+|++++.+.|.++.+++
T Consensus 264 ~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~ 343 (430)
T 3ri6_A 264 PMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQF 343 (430)
T ss_dssp GGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHC
T ss_pred hhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhC
Confidence 23332 2334568888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcc-eEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHH
Q psy12791 301 SGTSG-MLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDL 379 (393)
Q Consensus 301 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~ 379 (393)
++|+ +++|.++ +.+.+.+|+++++.++++.++|+.+|++++|..++|..++.++....|..+++||||+|.|+++++
T Consensus 344 -g~Gg~~lsf~l~-~~~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~~~dl 421 (430)
T 3ri6_A 344 -RYAGSILTFELE-SKEASYRFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEEIEDL 421 (430)
T ss_dssp -SSCCSEEEEECS-SHHHHHHHHHHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSSCHHHH
T ss_pred -CCCceEEEEEEC-CHHHHHHHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHH
Confidence 9999 9999995 788999999999999999999999999999999999999988888899999999999999999999
Q ss_pred HHHHHHHHH
Q psy12791 380 IADLDQALR 388 (393)
Q Consensus 380 i~~l~~al~ 388 (393)
+++|.+||+
T Consensus 422 ~~dl~~al~ 430 (430)
T 3ri6_A 422 KEDILQALC 430 (430)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhC
Confidence 999999873
No 6
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=100.00 E-value=2.2e-51 Score=394.17 Aligned_cols=379 Identities=34% Similarity=0.554 Sum_probs=335.5
Q ss_pred Cc-cceeeccCCCCC--CCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEE
Q psy12791 9 AF-ATKAVHIGSEPD--QWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGL 78 (393)
Q Consensus 9 ~~-~~~~~~~g~~~~--~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i 78 (393)
+| +|+++|+|..++ +.. .+..+|++++++|..+..+. -...+.|++++++...++|+++|+++|.++++
T Consensus 55 ~~~~t~~~~~~~~~~~~~~~-~~~~~Pi~~t~t~~~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~lA~l~g~~~~v 133 (445)
T 1qgn_A 55 NSDGSVAIHAGERLGRGIVT-DAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTL 133 (445)
T ss_dssp CSHHHHHHHTTTTTCCSSCC-SBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHTCSEEE
T ss_pred CCcccEEEecCCCCCcCCCC-CCcCCCcccCCceecCCHHHHHhhhccccCCccccCCCChHHHHHHHHHHHHhCCCcEE
Confidence 46 899999998875 433 58899999999998654221 12358899999999999999999999998999
Q ss_pred EeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCC-cEEEEecCCCCc
Q psy12791 79 CYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNT-KMVWIENPTNPL 156 (393)
Q Consensus 79 ~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~-~~v~l~~p~npt 156 (393)
++++|++++ .++.+++++||+|++++++|++++..+...++..|+++++++.+|++++++++++++ ++|++++|+|||
T Consensus 134 ~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tv~lV~le~p~Npt 213 (445)
T 1qgn_A 134 LMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTESPTNPF 213 (445)
T ss_dssp EESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEEESSCTTT
T ss_pred EeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCCCCEEEEeCCCCCC
Confidence 999999778 777778899999999999999877666666788999999999999999999998889 999999999999
Q ss_pred ccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc
Q psy12791 157 MTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM 236 (393)
Q Consensus 157 G~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~ 236 (393)
|.+.|+++|.++|+++ |+++|+|++|+.++...+...++|++++|+||+++|...+++||++++ +++++.++.....+
T Consensus 214 G~v~dl~~I~~la~~~-g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~-~~l~~~l~~~~~~~ 291 (445)
T 1qgn_A 214 LRCVDIELVSKLCHEK-GALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGP-LKLVSEIRNLHHIL 291 (445)
T ss_dssp CCCCCHHHHHHHHHHT-TCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEEC-HHHHHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHc-CCEEEEECCCcccccCCccccCCEEEEECCcccccccccceEEEEEEC-HHHHHHHHHHHHHh
Confidence 9999999999999999 999999999998776667777899999999999964434689999997 78888887777777
Q ss_pred CCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHH
Q psy12791 237 GVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAE 316 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
|...++..++++.++++.+..+++++.++++.+.++|+++|.+..+.+|++++.+.|.++.+++++.+++++|.+++..+
T Consensus 292 g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~ 371 (445)
T 1qgn_A 292 GGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLL 371 (445)
T ss_dssp CCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHH
T ss_pred CCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHH
Confidence 88888988888889999998899999999999999999999988889999998999999999988899999999976667
Q ss_pred HHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 317 ETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
....++++++.+++++++|+.+|+..+|..++|..++.+....+|..+++||||+|.++.++++++|.++|+++
T Consensus 372 ~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~Edid~li~~L~~al~~~ 445 (445)
T 1qgn_A 372 TTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDSI 445 (445)
T ss_dssp HHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCSSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 79999999998899999999999998888888988888888899998999999999999999999999998753
No 7
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=4.1e-50 Score=381.76 Aligned_cols=383 Identities=48% Similarity=0.780 Sum_probs=332.3
Q ss_pred CCCCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccH
Q psy12791 4 LPQDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSG 83 (393)
Q Consensus 4 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G 83 (393)
+++.+++.|.++|+|..++ . .++..+|++++++|..+........+.|++++++...++|+++|+++|.++.+++++|
T Consensus 2 ~~~~~~~~t~~~~~~~~~~-~-~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~la~~~g~~~~i~~~sG 79 (393)
T 1n8p_A 2 LQESDKFATKAIHAGEHVD-V-HGSVIEPISLSTTFKQSSPANPIGTYEYSRSQNPNRENLERAVAALENAQYGLAFSSG 79 (393)
T ss_dssp CCSSCCHHHHHHHTTCCCC-S-SCCSSCCBCCCSBCCBSSSSSBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEESCH
T ss_pred CCCCCCccceEEecCCCcc-C-CCCcCCCcccccceeeccccccccCcceecCCChhHHHHHHHHHHHhCCCcEEEECCh
Confidence 4667789999999998765 2 2689999999999987654332246889999999999999999999999899999999
Q ss_pred HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCH
Q psy12791 84 LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDV 162 (393)
Q Consensus 84 ~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 162 (393)
++++ .++. ++++||+|+++.|+|++++..+...++..|++++.++.+| +++++++++++++|++++|+||||.++|+
T Consensus 80 t~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l 157 (393)
T 1n8p_A 80 SATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-NDLPQLIKENTKLVWIETPTNPTLKVTDI 157 (393)
T ss_dssp HHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HHHHHHSCSSEEEEEECSSCTTTCCCCCH
T ss_pred HHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HHHHHhcccCceEEEEECCCCCcceecCH
Confidence 8788 6666 8899999999999999877666667888999999999888 99999998889999999999999999999
Q ss_pred HHHHHHHHhCC---CcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceE-EEEEecChHHHHHHHHHHHhcCC
Q psy12791 163 KAISAVVKQHP---DILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVM-GATVTNDDSLQARLKFLQNSMGV 238 (393)
Q Consensus 163 ~~l~~l~~~~~---~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~ 238 (393)
++|.++|++++ |+++|+|++|+.+....+...++|+++.|+||++ |++|+|+ ||++++++++++.++.....++.
T Consensus 158 ~~i~~la~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~-g~~G~rigG~~~~~~~~~~~~l~~~~~~~g~ 236 (393)
T 1n8p_A 158 QKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYI-NGHSDVVLGVLATNNKPLYERLQFLQNAIGA 236 (393)
T ss_dssp HHHHHHHHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTT-TCSSCCCCEEEEESCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECcccc-cCCCCceeEEEEeCCHHHHHHHHHHHHhcCC
Confidence 99999999983 7999999999987665555568999999999999 6899988 99998657888888777666777
Q ss_pred CCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCC-cceEeCCCCCCCcchHHHhhhcCC-C-cceEEEEEcCCH
Q psy12791 239 VPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPC-VKGVLHPGLPSHPNHELAKSQWSG-T-SGMLSFYVNGGA 315 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~v~~~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~ 315 (393)
..++..++.+...++.+..++++..++...+.++|++++. +..+.+|++...+.+.++.+..++ . +++++|.+++..
T Consensus 237 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~ 316 (393)
T 1n8p_A 237 IPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA 316 (393)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH
Confidence 7788888877788888888999999999999999998887 777888998888888888877666 6 899999997566
Q ss_pred HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 316 EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
++.+.+++.++..+++++.|+++++...|....|..++.+...++|..++.||||+|.++++++++++.++|+++.
T Consensus 317 ~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 317 EAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQAT 392 (393)
T ss_dssp HHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence 7899999999988999999999998887777788777777777888888999999999999999999999998764
No 8
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=100.00 E-value=5.1e-51 Score=389.40 Aligned_cols=374 Identities=28% Similarity=0.486 Sum_probs=322.3
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC--------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEe
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ--------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCY 80 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~--------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~ 80 (393)
+++|+++|+|..+++.. ++..+|++.+++|..+..+. ....+.|+|+++|..+++|+++|+++|.++.+++
T Consensus 25 ~~~t~~~~~~~~~~~~~-~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~ 103 (415)
T 2fq6_A 25 KLDTQLVNAGRSKKYTL-GAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLF 103 (415)
T ss_dssp CHHHHHHHTTCCHHHHT-TBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTSCCCTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcCceeEeCCCCCCCCC-CCEeCCeecccceeeCCHHHHHHhhccccCCCccccCCCCchHHHHHHHHHHHhCCCeEEEe
Confidence 78999999998765433 57899999999998654321 0235889999999999999999999999889999
Q ss_pred ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 81 SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 81 ~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
++|++++ .++.+++++||+|+++.++|++++..+...++..|+++++++.+|+++++++++++|++|++++|+||||.+
T Consensus 104 ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~tklV~~e~~~NptG~v 183 (415)
T 2fq6_A 104 PCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEV 183 (415)
T ss_dssp SSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTTEEEEEEESSCTTTCCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccCCcEEEEECCCCCCCEe
Confidence 9999888 777788899999999999999988777777788899999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHh--CCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHHHHhc
Q psy12791 160 FDVKAISAVVKQ--HPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFLQNSM 236 (393)
Q Consensus 160 ~~~~~l~~l~~~--~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~~~~~ 236 (393)
+|+++|.++|++ + |+++|+|++|+.++...++..++|+++.|+||+++ ++| ..+|+++++ +++++.++......
T Consensus 184 ~dl~~I~~la~~~~~-g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg-~~g~~~~G~l~~~-~~~~~~l~~~~~~~ 260 (415)
T 2fq6_A 184 HDVPAIVAAVRSVVP-DAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLV-GHSDAMIGTAVCN-ARCWEQLRENAYLM 260 (415)
T ss_dssp CCHHHHHHHHHHHCT-TCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTT-CSSSCCCEEEEEC-TTTHHHHHHHHHHT
T ss_pred ecHHHHHHHHHhhcC-CCEEEEECCCcccccCCccccCCeEEEEeCccccC-CCCCceEEEEEeC-HHHHHHHHHHHHhc
Confidence 999999999999 9 99999999999876666777789999999999995 555 557999987 56778887766667
Q ss_pred CCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC--C
Q psy12791 237 GVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG--G 314 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 314 (393)
|...++..++.+.+.++.+..++++..+++..+.++|+++|.+.++.+|+++..+.+.++.++..+.+++++|.+++ +
T Consensus 261 G~~~~~~~a~~~~~~l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~ 340 (415)
T 2fq6_A 261 GQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLN 340 (415)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCC
T ss_pred CCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCC
Confidence 77788888888888888888899999999999999999999998899999998888888888888889999999965 2
Q ss_pred HHHHHHHHHhcCccccccccCCccccccC--cccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 315 AEETRIFLESLLIFRCAESLGGIESLADL--PAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~g~~~s~~~~--~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.++.+.|++.++.+++++++|+.||+... |..+++... ..++|..++.||||+|.++++++++++.++|+++
T Consensus 341 ~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~----~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~~ 414 (415)
T 2fq6_A 341 NEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRP----QGEIDFSGTLIRLHIGLEDVDDLIADLDAGFARI 414 (415)
T ss_dssp HHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCT----TCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccc----hhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHhh
Confidence 78899999999999999999999998875 544443211 0135666799999999999999999999999864
No 9
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=100.00 E-value=1.7e-48 Score=370.51 Aligned_cols=376 Identities=37% Similarity=0.608 Sum_probs=330.4
Q ss_pred CCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCC-------CCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEe
Q psy12791 8 TAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPG-------QPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCY 80 (393)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~-------~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~ 80 (393)
.+++|.++|+| +++.. ++..+|++.+++|.....+ .....+.|+++++|...++++++|+++|.++.+++
T Consensus 4 ~~~~t~~~~~~--~~~~~-~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~i~~ 80 (389)
T 3acz_A 4 QDITTTLLHPK--GDHVL-HSHAYPIFQTSTFCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIEGAAGSAAF 80 (389)
T ss_dssp CCHHHHHHSCS--SCCST-TBSSCCBCCCSBBCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCcceeEEecC--CCCCC-CCCCCCcccCCceecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 46889999999 33322 5889999999998865421 11346889999999999999999999999999999
Q ss_pred ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 81 SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 81 ~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
+||++++ .++..++++||+|++++++|++++..+...++..|++++.++..|++++++.+++++++|++++|+||||.+
T Consensus 81 ~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~ 160 (389)
T 3acz_A 81 GSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPNTKMVYLESPANPTCKV 160 (389)
T ss_dssp SSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTTEEEEEEESSCTTTCCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCee
Confidence 9999888 666677899999999999999877666666788999999999999999999999899999999999999999
Q ss_pred cCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceE-EEEEecChHHHHHHHHHHHhcCC
Q psy12791 160 FDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVM-GATVTNDDSLQARLKFLQNSMGV 238 (393)
Q Consensus 160 ~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~ 238 (393)
+|+++|.++|+++ |+++|+|++|+.+....++..++|+++.|+||++ |.+|.|+ ||++++++++++.++.....++.
T Consensus 161 ~~l~~i~~~~~~~-~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~-~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~ 238 (389)
T 3acz_A 161 SDIKGIAVVCHER-GARLVVDATFTSPCFLKPLELGADIALHSVSKYI-NGHGDVIGGVSSAKTAEDIATIKFYRKDAGS 238 (389)
T ss_dssp CCHHHHHHHHHHH-TCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTT-TCSSCCCCEEEEESSHHHHHHHHHHHHHHCC
T ss_pred cCHHHHHHHHHHc-CCEEEEECCCccccccCccccCCeEEEECChhhc-cCCCCceeEEEEECcHHHHHHHHHHHHhcCC
Confidence 9999999999999 9999999999987766677778999999999999 4677787 99999843888888777766788
Q ss_pred CCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHH
Q psy12791 239 VPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEET 318 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
..++..++.+.+.++.+..+++++.++...+.++|++++.+..+.++++++.+.+.++.+..++.+++++|.+++ .+..
T Consensus 239 ~~~~~~~~~~~~~l~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~-~~~~ 317 (389)
T 3acz_A 239 LMAPMDAFLCARGMKTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKS-FEAA 317 (389)
T ss_dssp CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-HHHH
T ss_pred CCCHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECC-HHHH
Confidence 888988888888999988899999999999999999999999999999998888888888878889999999964 7788
Q ss_pred HHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 319 RIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 319 ~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
..+++++++...+.++|+.+|+...+....|..++.+.....|.++++||+|++.++++++++++.++|++
T Consensus 318 ~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al~~ 388 (389)
T 3acz_A 318 KKLMEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQALEL 388 (389)
T ss_dssp HHHHTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHTC
T ss_pred HHHHHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 99999999888899999999999988888888888888888898889999999999999999999999864
No 10
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=100.00 E-value=3.9e-47 Score=362.40 Aligned_cols=380 Identities=37% Similarity=0.595 Sum_probs=306.4
Q ss_pred CCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEE
Q psy12791 7 DTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLC 79 (393)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~ 79 (393)
..++.|.++|+|..+++.. .+...|.++++++..+.... ....+.|++++++...++++.+|+++|.++.++
T Consensus 7 ~~~~~t~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~~~~i~ 85 (398)
T 1gc0_A 7 LPGFATRAIHHGYDPQDHG-GALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLA 85 (398)
T ss_dssp CCCHHHHHHHTTCCGGGGT-TBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCcCceeEeCCCCCCCCC-CCcCCCccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCCCcEEE
Confidence 3468899999998765433 47788888888877654221 123467899999999999999999999999999
Q ss_pred eccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccc
Q psy12791 80 YSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMT 158 (393)
Q Consensus 80 ~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 158 (393)
+++|++++ .++..++++||+|+++.++|+++...+...++..|++++.++.+|++++++.+++++++|++++|+||||.
T Consensus 86 ~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~ 165 (398)
T 1gc0_A 86 LASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMH 165 (398)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCC
T ss_pred ECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCcc
Confidence 99998778 77777889999999999999987666655567889999999999999999999989999999999999999
Q ss_pred ccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceE-EEEEecChHHHH-HHHHHHHh-
Q psy12791 159 VFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVM-GATVTNDDSLQA-RLKFLQNS- 235 (393)
Q Consensus 159 ~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~-G~~~~~~~~~~~-~~~~~~~~- 235 (393)
++|+++|.++|+++ |+++|+|++|+.+....++..++|+++.|+||++ |.+|.|+ ||++++ +++++ .++.....
T Consensus 166 ~~~l~~i~~l~~~~-~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~-~~~~~~~~G~l~~~-~~~~~~~~~~~~~~~ 242 (398)
T 1gc0_A 166 MADIAGVAKIARKH-GATVVVDNTYCTPYLQRPLELGADLVVHSATKYL-SGHGDITAGIVVGS-QALVDRIRLQGLKDM 242 (398)
T ss_dssp CCCHHHHHHHHGGG-TCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTT-TCSSSCCCEEEEEC-HHHHHHHHHTHHHHH
T ss_pred cccHHHHHHHHHHc-CCEEEEECCCcccccCCchhhCceEEEECCcccc-CCCCCCeEEEEEEC-hHHHHHHHHHHhhcc
Confidence 99999999999999 9999999999987766666678999999999999 5677786 999997 55444 66655555
Q ss_pred cCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH
Q psy12791 236 MGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA 315 (393)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
++...++..++.+.+.++.+..++++..++.+.+.++|++++.+..+.+|++++.+.+.++.+..++.++++.|.+++..
T Consensus 243 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 322 (398)
T 1gc0_A 243 TGAVLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGI 322 (398)
T ss_dssp TCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHH
T ss_pred CCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCCH
Confidence 67778888888888888988889999999999999999999998888899998888888877766778899999996445
Q ss_pred HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 316 EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+....+++++++.....++|+.+++++++....|...+.+....+|..+++||+|++.++++++++++.++|+++
T Consensus 323 ~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 323 GAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp HHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 678899999998888899999999999888888888888888889998999999999999999999999999875
No 11
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=1e-46 Score=359.87 Aligned_cols=382 Identities=37% Similarity=0.605 Sum_probs=323.4
Q ss_pred CCCCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCC-------CCCCCccccCCCCchHHHHHHHHHHHhCCCcEE
Q psy12791 6 QDTAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPG-------QPPQGFEYSRSNNPTRRNLERCIASLEEAKHGL 78 (393)
Q Consensus 6 ~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~-------~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i 78 (393)
+++++.|.++|+|.. +.. +.+...|.++++.+..+... .....+.|++.+++..+++++++|+++|.++.+
T Consensus 4 ~~~~~~t~~~~~~~~-~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~~~i 81 (404)
T 1e5e_A 4 ERMTPATACIHANPQ-KDQ-FGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACV 81 (404)
T ss_dssp CCCCHHHHHHHSSCC-CCT-TCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred CCCCccceeeecCCC-CCC-CCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCCcEE
Confidence 446789999999987 332 35677888888877754421 112357788888898999999999999999899
Q ss_pred EeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcc
Q psy12791 79 CYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLM 157 (393)
Q Consensus 79 ~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG 157 (393)
++++|++++ .++.+++++||+|+++.|+|+++...+...++..|++++.++.+|++++++.+.+++++|++++|+||||
T Consensus 82 ~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~t~~v~l~~p~NptG 161 (404)
T 1e5e_A 82 ATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFETPANPTL 161 (404)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEESSCTTTC
T ss_pred EeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCcEEEEECCCCCCC
Confidence 999999778 7777788999999999999997655444467889999999999999999999998999999999999999
Q ss_pred cccCHHHHHHHHHh-CCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceE-EEEEecChHHHH-HHHHHHH
Q psy12791 158 TVFDVKAISAVVKQ-HPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVM-GATVTNDDSLQA-RLKFLQN 234 (393)
Q Consensus 158 ~~~~~~~l~~l~~~-~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~-G~~~~~~~~~~~-~~~~~~~ 234 (393)
.++|+++|.++|++ + |+++|+||+|+.+.+..++..++|+++.|+||++ |.+|.|+ ||++++ +++++ .++....
T Consensus 162 ~v~~l~~i~~la~~~~-~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~-~~~g~ri~G~~~~~-~~~~~~~l~~~~~ 238 (404)
T 1e5e_A 162 KIIDMERVCKDAHSQE-GVLVIADNTFCSPMITNPVDFGVDVVVHSATKYI-NGHTDVVAGLICGK-ADLLQQIRMVGIK 238 (404)
T ss_dssp CCCCHHHHHHHHHTST-TCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTT-TCSSCCCCEEEEEC-HHHHHHHHHTCCC
T ss_pred cccCHHHHHHHHHhhc-CCEEEEECCCchhhhCCccccCCEEEEEcCcccc-CCCCCCeEEEEEEC-HHHHHHHHHHHHH
Confidence 99999999999999 9 9999999999988765566678999999999999 5889997 999998 66666 6665544
Q ss_pred hc-CCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC
Q psy12791 235 SM-GVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG 313 (393)
Q Consensus 235 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
.+ +...++..++++.+.++.+..++++..++.+.+.+++++++.+..+.++.+++.+.+.++....++.++++.|.+++
T Consensus 239 ~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~ 318 (404)
T 1e5e_A 239 DITGSVISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS 318 (404)
T ss_dssp CCCCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT
T ss_pred hCCCCCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC
Confidence 45 66678888888888888888889999999999999999998888889999988888888887777888999999954
Q ss_pred CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 314 GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 314 ~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
..+....+++++++...+.++|+.+|++..+....+..++.+.....|.++++||||++.++.+++++++.++++++.+
T Consensus 319 ~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~e~~~~li~~l~~al~~~~~ 397 (404)
T 1e5e_A 319 GFEGAKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGIEDADELIADFKQGLDALLR 397 (404)
T ss_dssp HHHHHHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 3356788899888877788999999999988888888888888888888789999999999999999999999987643
No 12
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=1.6e-45 Score=353.46 Aligned_cols=376 Identities=32% Similarity=0.545 Sum_probs=317.7
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC-------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEec
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ-------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYS 81 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~-------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~ 81 (393)
++.|.++|+|..+++.. ++..+|++++++|..+..+. ....+.|+++.++...++++++|+++|.++.++++
T Consensus 2 ~~~t~~~~~~~~~~~~~-~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~v~~~ 80 (421)
T 2ctz_A 2 RFETLQLHAGYEPEPTT-LSRQVPIYPTTSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGKAALATA 80 (421)
T ss_dssp CHHHHHHHTTCCCCTTT-CBSSCCBCCCSCBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CcceeeeeCCCCCCcCC-CCccCCeeccceeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHhCCCceEEec
Confidence 56899999998776543 57889999999988654211 12357799998999999999999999998899999
Q ss_pred cHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee-CCCCHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 82 SGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV-DLRKIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 82 ~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~-~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
+|++++ .++..++++||+|+++.++|+++...+...++..|++++.+ +.+|++++++.+++++++|++++|+||||.+
T Consensus 81 sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~n~~G~~ 160 (421)
T 2ctz_A 81 SGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNI 160 (421)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccCCeEEEEECCCCCCCcc
Confidence 998888 77777789999999999999987666655567889999999 9889999999999999999999999999999
Q ss_pred cCHHHHHHHHHhCCCcEEEEeCcc-CcccccCCCCCcCcEEEEcccccccCCCCceEEEEEec--ChHH----HHHHH--
Q psy12791 160 FDVKAISAVVKQHPDILLVLDNTF-LTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTN--DDSL----QARLK-- 230 (393)
Q Consensus 160 ~~~~~l~~l~~~~~~~~livDea~-~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~--~~~~----~~~~~-- 230 (393)
+|+++|.++|+++ |+++|+|++| +.++...++..++|+++.|+||+++ .+|.++|++++. ++++ .+.+.
T Consensus 161 ~~l~~i~~~a~~~-g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~-~~g~~~G~~~~~~~~~~~~~~~~~~l~~~ 238 (421)
T 2ctz_A 161 PDLEALAQAAREK-GVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVG-GHGAVIAGAIVDGGNFPWEGGRYPLLTEP 238 (421)
T ss_dssp CCHHHHHHHHHHH-TCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTT-CSSCCCCEEEEECSCSCCTTTTCHHHHSC
T ss_pred cCHHHHHHHHHHc-CCEEEEECCcccccccCCccccCCeEEEECCccccc-CCCCcEEEEEEeccchhhcccchhhhccc
Confidence 9999999999999 9999999999 7665445556689999999999994 678788877764 2221 11111
Q ss_pred --------------------H----HHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCC
Q psy12791 231 --------------------F----LQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPG 286 (393)
Q Consensus 231 --------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~ 286 (393)
. ....+|...++..++++...++.+..+++++.++++++.++|+++|.+..+.+|+
T Consensus 239 ~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~ 318 (421)
T 2ctz_A 239 QPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPG 318 (421)
T ss_dssp BGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTT
T ss_pred cchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCC
Confidence 0 1123566778888888889999998888988899999999999999998888899
Q ss_pred CCCCcchHHHhhhc-CCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCC
Q psy12791 287 LPSHPNHELAKSQW-SGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDN 365 (393)
Q Consensus 287 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~ 365 (393)
++..+.|.++.+++ ++.++++.|.+.+..+....++++++..+++.++|+.+++..++....|..++.+....+|+.++
T Consensus 319 ~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~ 398 (421)
T 2ctz_A 319 LPHHPHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPE 398 (421)
T ss_dssp STTCTTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTT
T ss_pred CCCCCCHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCC
Confidence 98888999988887 67899999999644578899999999988999999999998888888898888888888999899
Q ss_pred eEEEEecCCChHHHHHHHHHHH
Q psy12791 366 LVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 366 ~iRls~~~~~~~~~i~~l~~al 387 (393)
.||+|+|.+++|+++++|.++|
T Consensus 399 ~vRlS~g~e~~~~li~~l~~al 420 (421)
T 2ctz_A 399 MVRLSVGLEHVEDLKAELKEAL 420 (421)
T ss_dssp EEEEECCSSCHHHHHHHHHHHT
T ss_pred eEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999999999886
No 13
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=2.9e-44 Score=341.30 Aligned_cols=381 Identities=38% Similarity=0.624 Sum_probs=318.2
Q ss_pred CCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH
Q psy12791 8 TAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV 87 (393)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al 87 (393)
+++.|.++|+|..+++.. ++..+|+.+++++....... ...+.|++|+++...++++++|++++.++.+++++|++++
T Consensus 3 ~~~~t~~~~~~~~~~~~~-~~~~~pi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~ 80 (386)
T 1cs1_A 3 RKQATIAVRSGLNDDEQY-GCVVPPIHLSSTYNFTGFNE-PRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAI 80 (386)
T ss_dssp CCHHHHHHHTTTTCCTTT-CBSSCCBCCCSBBCCSBTTB-CCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHH
T ss_pred CCcceeEEecCCCccccC-CCCCCCccccceeeccccCC-CCCcceeCCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHH
Confidence 467899999998765433 58899999999998755433 3468899999999999999999999998999999997778
Q ss_pred -HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHH
Q psy12791 88 -TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAIS 166 (393)
Q Consensus 88 -~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~ 166 (393)
.++..++++||+|+++.|+|++++..+...++..|++++.++.+|++++++.+++++++|++++|+||||.++|+++|.
T Consensus 81 ~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~ 160 (386)
T 1cs1_A 81 HLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKIC 160 (386)
T ss_dssp HHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHH
T ss_pred HHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHH
Confidence 7777778999999999999998776666667888999999999999999999988899999999999999999999999
Q ss_pred HHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceE-EEEEecChHHHHHHHHHHHhcCCCCCHHHH
Q psy12791 167 AVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVM-GATVTNDDSLQARLKFLQNSMGVVPSPFDC 245 (393)
Q Consensus 167 ~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (393)
++|+++ |+++|+||+|+.+....+...++|+++.|+||+++ .+|.|+ ||++++++++.+.++.....++...++..+
T Consensus 161 ~l~~~~-~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~-~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 238 (386)
T 1cs1_A 161 HLAREV-GAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLN-GHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDS 238 (386)
T ss_dssp HHHHHT-TCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTT-CSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHH
T ss_pred HHHHHc-CCEEEEECCCcccccCCccccCceEEEEcCccccc-CCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHH
Confidence 999999 99999999999876655556688999999999994 667675 999998558888887776666666788887
Q ss_pred HHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhc
Q psy12791 246 WLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESL 325 (393)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (393)
+.+...++.+..++++..++...+.++|++++.+..+.++.+.+.+.+.+.....++.++++.|.+++..+....+++..
T Consensus 239 ~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 318 (386)
T 1cs1_A 239 YLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGL 318 (386)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHHHHHHTC
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCCHHHHHHHHHhC
Confidence 77777778888888889999999999999988888788898888877777776667778999999965545666666665
Q ss_pred CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 326 LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 326 ~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
++...+.++|+.+++.+.+....+...+.+....+|..+++||+|++.++++++++++.++|+++.+
T Consensus 319 gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~~~ 385 (386)
T 1cs1_A 319 SLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANK 385 (386)
T ss_dssp SSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHHTC
T ss_pred CcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHhhc
Confidence 5544444578888888777666666667666777788789999999999999999999999998764
No 14
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=7.2e-45 Score=346.80 Aligned_cols=379 Identities=39% Similarity=0.656 Sum_probs=316.7
Q ss_pred CCccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCC-------CCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEe
Q psy12791 8 TAFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPG-------QPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCY 80 (393)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~-------~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~ 80 (393)
+++.|+++|+|..++... .+...|.++++.+..+... .....+.|++++++...++++++++++|.++.+++
T Consensus 7 ~~~~t~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~i~~ 85 (398)
T 2rfv_A 7 YGFNTQIVHAGQQPDPST-GALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLAT 85 (398)
T ss_dssp SCHHHHHHHTTCCCCTTT-CCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCceeEeecCCcCccCC-CCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCCcEEEE
Confidence 468899999998764432 4566777777766654311 11235778888899999999999999999999999
Q ss_pred ccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 81 SSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 81 ~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
++|++++ .++..++++||+|+++.|+|+++...+...++..|.+++.++.+|++++++.+++++++|++++|+||||.+
T Consensus 86 ~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~ 165 (398)
T 2rfv_A 86 ASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYIETPANPTLSL 165 (398)
T ss_dssp SSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSBTTTTBC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCcc
Confidence 9999888 777778899999999999999866555555578899999999999999999999899999999999999999
Q ss_pred cCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceE-EEEEecChHHHH-HHHHHHHhc-
Q psy12791 160 FDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVM-GATVTNDDSLQA-RLKFLQNSM- 236 (393)
Q Consensus 160 ~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~-G~~~~~~~~~~~-~~~~~~~~~- 236 (393)
+|+++|.++|+++ |+++|+||+|+.+....+...++|+++.|+||++ |.+|.|+ ||++++ +++++ .++.....+
T Consensus 166 ~~l~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~-~~~g~~~~G~~~~~-~~~~~~~~~~~~~~~~ 242 (398)
T 2rfv_A 166 VDIETVAGIAHQQ-GALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYI-NGHGDVIGGIIVGK-QEFIDQARFVGLKDIT 242 (398)
T ss_dssp CCHHHHHHHHHHT-TCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTT-TCSSCCCCEEEEEC-HHHHHHHHHTHHHHTT
T ss_pred cCHHHHHHHHHHc-CCEEEEECCCcccccCCchhhCCcEEEEeCcccc-cCCCCceEEEEEEC-HHHHHHHHHHHHHhCC
Confidence 9999999999999 9999999999987765566668999999999999 4688887 999998 66665 666555555
Q ss_pred CCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHH
Q psy12791 237 GVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAE 316 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
+...++..++.+.+.++.+..++++..++...+.++|++++.+..+.++.+++.+.+.+.....++.+++++|.+++..+
T Consensus 243 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 322 (398)
T 2rfv_A 243 GGCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLE 322 (398)
T ss_dssp CCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHH
T ss_pred CCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHH
Confidence 66778888888888888888888888999999999999998888888999988887777776656778999999954346
Q ss_pred HHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 317 ETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
....+++.++..++.+++|+.++++.++....+..++.+.....|..++.||||++.++++++++++.++|+++
T Consensus 323 ~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 323 AGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp HHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 78889999988899999999998887776667776677777777887899999999999999999999999875
No 15
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=100.00 E-value=3.2e-44 Score=343.75 Aligned_cols=374 Identities=31% Similarity=0.500 Sum_probs=315.7
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCC------CCCCccccCCCCchHHHHHHHHHHHhCCCcEEEecc
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQ------PPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSS 82 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~ 82 (393)
++.|.++|+|..++ . .++..+|+..+.++.....+. ....+.|+++.++...++|+.+|+++|.++.+++++
T Consensus 2 ~~~t~~~~~~~~~~-~-~~~~~~pi~~s~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~~~~~~ 79 (412)
T 2cb1_A 2 EYTTLAVLAGLPED-P-HGAVGLPIYAVAAYGFKTLEEGQERFATGEGYVYARQKDPTAKALEERLKALEGALEAVVLAS 79 (412)
T ss_dssp CHHHHHHHTTCCCC-T-TCCSSCCCCCCSBCCCSSHHHHHHHHHHCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESS
T ss_pred CccceeeecCCCcC-C-CCCcCCCccccceeecCChHHHHHHhccccCcCcCCCCChHHHHHHHHHHHHhCCCcEEEECC
Confidence 46899999998775 2 257889998887777643211 023577998888999999999999999988888888
Q ss_pred HHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccC
Q psy12791 83 GLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFD 161 (393)
Q Consensus 83 G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 161 (393)
|++++ .++..++++||+|+++.++|++++..+...++..|++++.++.+ ++++++.+++++++|++++|+||||.++|
T Consensus 80 gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~l~~~i~~~~~~v~~~~~~n~~G~~~~ 158 (412)
T 2cb1_A 80 GQAATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDPE-PEAVREALSAKTRAVFVETVANPALLVPD 158 (412)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECSS-HHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-HHHHHHHhccCCeEEEEeCCCCCCccccc
Confidence 88888 77777789999999999999887666666678889999999875 99999999989999999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcc-cccCCCCCcCcEEEEcccccccCCCCceEEEEEecC-h----------------
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTA-YYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTND-D---------------- 223 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~-~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~-~---------------- 223 (393)
+++|.++|+++ |+++|+|++|+.+ ....+...++|+++.|+||+++ .+|.|+|+++..+ .
T Consensus 159 l~~i~~l~~~~-~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~-~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 236 (412)
T 2cb1_A 159 LEALATLAEEA-GVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWAS-GHGSVLGGAVLSRETELWRNYPQFLQPDLKG 236 (412)
T ss_dssp HHHHHHHHHHH-TCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTT-CSSCCCCEEEEECCCSGGGGSGGGGCC----
T ss_pred HHHHHHHHHHc-CCEEEEECCCccccccCCccccCCeEEEECCccccc-CCCCcEEEEEEeccccccccccccccccccc
Confidence 99999999999 9999999999987 4445555689999999999994 6777888877653 2
Q ss_pred ----------HHHHHHHHHH-HhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcc
Q psy12791 224 ----------SLQARLKFLQ-NSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPN 292 (393)
Q Consensus 224 ----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~ 292 (393)
++.+.++... ...+....+..+++....++.+..++++..++.+.+.++|.+++.+..+..|+....+.
T Consensus 237 ~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~ 316 (412)
T 2cb1_A 237 QIPWEALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPA 316 (412)
T ss_dssp ---HHHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTT
T ss_pred cchhhccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcc
Confidence 3445554433 33455567888888888888888888888889999999999999988888899888889
Q ss_pred hHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEec
Q psy12791 293 HELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVG 372 (393)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~ 372 (393)
+.++.+.+++.+++++|.+ ++.+....+++++++.. +.++|+.+++..++....+..++.+...++|..++.||+|+|
T Consensus 317 ~~~~~~~~~~~~~iv~~~~-~~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g 394 (412)
T 2cb1_A 317 HRNARKYLASGGPILTLDL-GDLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVG 394 (412)
T ss_dssp HHHHHHHCSSSCSEEEEEC-SSHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECC
T ss_pred HHHHHHhCCCCceEEEEEe-CCHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEec
Confidence 9999999888899999999 78889999999999888 999999999988877777777888888889998999999999
Q ss_pred CCChHHHHHHHHHHHHH
Q psy12791 373 VEGYTDLIADLDQALRK 389 (393)
Q Consensus 373 ~~~~~~~i~~l~~al~~ 389 (393)
.++++++++++.++|++
T Consensus 395 ~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 395 LEDPLDLLALFEEALEA 411 (412)
T ss_dssp SSCHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHhh
Confidence 99999999999999975
No 16
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=1.1e-43 Score=343.18 Aligned_cols=377 Identities=39% Similarity=0.692 Sum_probs=309.9
Q ss_pred CccceeeccCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHHH
Q psy12791 9 AFATKAVHIGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAVT 88 (393)
Q Consensus 9 ~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al~ 88 (393)
++++.++|.|...+ .|....+|+.....+....... ...+.|++++++...++++.+++++|.++.+++++|++++.
T Consensus 86 ~~~~~~i~l~~g~~--~~~~~~~~i~~a~~~~~~~~~~-~~~~~Y~~~g~~~~~~l~~~la~~~g~~~~i~~~sGt~al~ 162 (464)
T 1ibj_A 86 SVSTLLVNLDNKFD--PFDAMSTPLYQTATFKQPSAIE-NGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALS 162 (464)
T ss_dssp CHHHHHTCCCCSSC--TTCCSSCCCCCCSBCCCSSSSC-CCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHH
T ss_pred CcCCeEEECCCCCC--CCCCCCccHHhhhhhhhhcccc-cCCccccCCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHH
Confidence 46677777766421 1335566666655544222111 23577888899999999999999999988999999988884
Q ss_pred HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHH
Q psy12791 89 AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAV 168 (393)
Q Consensus 89 ~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l 168 (393)
++..++++||+|++++|+|+++...+...++..|++++.++.+|++++++++.+++++|++++|+||||.++|+++|.++
T Consensus 163 ~~l~~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~l 242 (464)
T 1ibj_A 163 AVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEM 242 (464)
T ss_dssp HHHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred HHHHHhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHH
Confidence 44457899999999999999765545556788899999999999999999999899999999999999999999999999
Q ss_pred HHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHH
Q psy12791 169 VKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLV 248 (393)
Q Consensus 169 ~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (393)
|+++ |+++|+||+|..+....+...++|+++.|+||+++|++|+|+||++++++++.+.++......+...++..++++
T Consensus 243 a~~~-gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~ 321 (464)
T 1ibj_A 243 AHAQ-GALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLC 321 (464)
T ss_dssp HHTT-TCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHH
T ss_pred HHHc-CCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 9999 999999999997655455567899999999999987889999999998668888887776666777788888888
Q ss_pred HhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc
Q psy12791 249 TRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF 328 (393)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (393)
.+.++.+..++++..++...+.+++++++.+..+.++++.+.+.+.++.....+++++++|.+. +.+..+.+++.+...
T Consensus 322 ~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~-~~~~~~~~~~~L~~~ 400 (464)
T 1ibj_A 322 LRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITG-SVALSKHLVETTKYF 400 (464)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECS-CHHHHHHHHHHCSSS
T ss_pred HhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEEC-CHHHHHHHHHhcCcc
Confidence 8888888888888888999999999998888889999998887777777666677899999994 555567799999888
Q ss_pred ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 329 RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 329 ~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
++.++.|+.+++.+.|..+.+...+.+.....|..+++||+|++.++.++.+++|.++|+++
T Consensus 401 gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~edi~~li~~L~~al~~~ 462 (464)
T 1ibj_A 401 SIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTF 462 (464)
T ss_dssp EECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCSSCHHHHHHHHHHHHHSC
T ss_pred eEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHhhc
Confidence 99999999999988887666665555555556777899999999999999999999998754
No 17
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=100.00 E-value=1.4e-39 Score=302.50 Aligned_cols=325 Identities=42% Similarity=0.650 Sum_probs=271.2
Q ss_pred HHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcC
Q psy12791 63 NLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIK 141 (393)
Q Consensus 63 ~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~ 141 (393)
++|+++|+++|.++++++++|++++ .++.+++++||+|+++.|+|+++...+...++..|++++.++..|++++++.++
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~ 81 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK 81 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc
Confidence 6899999999999999999998778 667777899999999999999765544444566899999999889999999999
Q ss_pred CCCcEEEEecCCCCcccccCHHHHHHHHHh-CCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccCCCCce-EEEEE
Q psy12791 142 PNTKMVWIENPTNPLMTVFDVKAISAVVKQ-HPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVV-MGATV 219 (393)
Q Consensus 142 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~-~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r-~G~~~ 219 (393)
+++++|++++|+||||.++|+++|.++|++ + |+++|+|++|+.+....+...++|+++.|+||++ |.+|.| +||++
T Consensus 82 ~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~-~~~~~r~~G~~~ 159 (331)
T 1pff_A 82 PNTRIVYFETPANPTLKVIDIEDAVKQARKQK-DILVIVDNTFASPILTNPLDLGVDIVVHSATKYI-NGHTDVVAGLVC 159 (331)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSS-SCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTT-SSSSSCCCEEEE
T ss_pred CCCeEEEEECCCCCcCcccCHHHHHHHHhhhc-CCEEEEECCCcccccCChhhcCCcEEEEECcccc-CCCCCceEEEEE
Confidence 889999999999999999999999999999 9 9999999999987655555678999999999999 578888 89999
Q ss_pred ecChHHHHHHHHHHHh-cCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhh
Q psy12791 220 TNDDSLQARLKFLQNS-MGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKS 298 (393)
Q Consensus 220 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~ 298 (393)
++++++.+.++..... ++...++..++.+...++.+..++++..++...+.+++++++.+..+.++.+.+.+...+...
T Consensus 160 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~ 239 (331)
T 1pff_A 160 SRADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKK 239 (331)
T ss_dssp ECHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHH
T ss_pred eCcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHh
Confidence 9833888877665554 455677777776666666666778888889999999999888877788888887777777766
Q ss_pred hcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHH
Q psy12791 299 QWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTD 378 (393)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~ 378 (393)
..++.++++.|.+. +.+....+++..++...+.++|+.+|+...+....+...+.+....+|..++++|+|++.+++++
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~ 318 (331)
T 1pff_A 240 QMKMFGSMIAFDVD-GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQD 318 (331)
T ss_dssp HCSSCCSEEEEECS-SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHH
T ss_pred hCCCCceEEEEEEC-CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHH
Confidence 65667889999995 67778888887776666788999888887766666666666666777887899999999999999
Q ss_pred HHHHHHHHHHHh
Q psy12791 379 LIADLDQALRKA 390 (393)
Q Consensus 379 ~i~~l~~al~~~ 390 (393)
+++.+.++|+++
T Consensus 319 ~i~~l~~~l~~~ 330 (331)
T 1pff_A 319 IIDDLKQALDLV 330 (331)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHh
Confidence 999999999764
No 18
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=8.2e-35 Score=273.13 Aligned_cols=303 Identities=16% Similarity=0.184 Sum_probs=222.7
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCC
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAG 97 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~g 97 (393)
.+++| ++|+||+++++.+ ++ . ...+|+++...++|+++|++++.+ ++|++++|+++ + .++.+++++|
T Consensus 29 ~~~i~l~~~~~~~~~~~~v--a~----~---~~~~Y~~~~~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~~~g 99 (356)
T 1fg7_A 29 NGDVWLNANEYPTAVEFQL--TQ----Q---TLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPG 99 (356)
T ss_dssp TCSEECSSCCCSSCCCCCC--CC----C---CTTSCCCSSCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTT
T ss_pred CceEEeeCCCCCCCCCHhH--hh----h---hhccCCCccHHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHhCCC
Confidence 46778 9999999988776 21 1 234556667889999999999986 78999999776 6 6677778899
Q ss_pred -CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHh
Q psy12791 98 -DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQ 171 (393)
Q Consensus 98 -d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~ 171 (393)
|+|+++.|+|++ +...++..|.+++.++.+ |++++++.++ ++++|++++||||||.++|.+++.++++.
T Consensus 100 ~d~Vl~~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~ 174 (356)
T 1fg7_A 100 KDAILYCPPTYGM----YSVSAETIGVECRTVPTLDNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLEL 174 (356)
T ss_dssp TCEEEECSSSCTH----HHHHHHHHTCEEEECCCCTTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred CCEEEEeCCChHH----HHHHHHHcCCEEEEeeCCCCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHh
Confidence 999999999985 566677789999999874 7899999888 89999999999999999996665555443
Q ss_pred --CCCcEEEEeCccCcccccCC-C----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHH
Q psy12791 172 --HPDILLVLDNTFLTAYYQKS-L----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFD 244 (393)
Q Consensus 172 --~~~~~livDea~~~~~~~~~-~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (393)
+ |+++|+||+|..+....+ . ..+++++++|+||++ |++|+|+||++++ +++++.++.....+ ..++..
T Consensus 175 ~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~l~~~~~~~--~~~~~~ 249 (356)
T 1fg7_A 175 TRG-KAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAF-ALAGLRCGFTLAN-EEVINLLMKVIAPY--PLSTPV 249 (356)
T ss_dssp HTT-TCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTT-CCGGGCCEEEEEC-HHHHHHHHHHSCSS--CSCHHH
T ss_pred CCC-CCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhh-cCchhhhEEEEeC-HHHHHHHHHhcCCC--CCCHHH
Confidence 8 999999999997652111 1 135789999999999 6999999999996 88888887655443 455666
Q ss_pred HHHHHhccCC-----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHH
Q psy12791 245 CWLVTRGLKT-----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETR 319 (393)
Q Consensus 245 ~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (393)
+..+...++. +...+++..++++.+.+.|++++.+.. ..|. .+.++++.++ + ..
T Consensus 250 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~----------------~~~~~~~~~~-~---~~ 308 (356)
T 1fg7_A 250 ADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQ-VFDS----------------ETNYILARFK-A---SS 308 (356)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEE-ECCC----------------SSSEEEEEET-T---HH
T ss_pred HHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceE-ECCC----------------CCeEEEEECC-C---HH
Confidence 6666666654 344555666777888888887765322 2232 2567898884 3 33
Q ss_pred HHHHhcCcccccccc-CCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 320 IFLESLLIFRCAESL-GGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 320 ~~~~~l~~~~~~~~~-g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.+.+.|...++.+.. |..+ |. ++++|+|++ ++++++.+.++|+++
T Consensus 309 ~l~~~L~~~gI~v~~~g~~~----------------------~~-~~~iRis~~---~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 309 AVFKSLWDQGIILRDQNKQP----------------------SL-SGCLRITVG---TREESQRVIDALRAE 354 (356)
T ss_dssp HHHHHHHHTTEECEECTTST----------------------TC-TTEEEEECC---CHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCEEEEECCCCC----------------------CC-CCeEEEEeC---CHHHHHHHHHHHHhh
Confidence 455555444555554 3321 11 469999998 467788888888754
No 19
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=2.9e-34 Score=269.98 Aligned_cols=311 Identities=16% Similarity=0.229 Sum_probs=230.1
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHH-HH-HHHHHhcCCC
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLG-AV-TAVTHLLSAG 97 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~-al-~~~~~~~~~g 97 (393)
.+++| +++.||+.+++.+.+++.+.+.. +..|+++...++|+++|++++.+ +.+++++|++ ++ .++..++++|
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~---~~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~g 108 (363)
T 3ffh_A 32 TKITKLSSNENPLGTSKKVAAIQANSSVE---TEIYPDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTT 108 (363)
T ss_dssp SCCEECSSCSCTTCCCHHHHHHHHTCBSC---CCBC----CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCSTT
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHHH---hhcCCCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHccCC
Confidence 46788 89999999888888776655332 44456778899999999999975 6677766665 57 6677788999
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 172 (393)
|+|+++.|+|.+ +...++..|++++.++.+ |++++++.+++++++|++++|+||||.++|.+++.++++.+
T Consensus 109 d~vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~ 184 (363)
T 3ffh_A 109 TNTVMATPTFVQ----YRQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRV 184 (363)
T ss_dssp CEEEEEESSCHH----HHHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTS
T ss_pred CEEEEcCCChHH----HHHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhC
Confidence 999999999985 666677889999999887 89999999998999999999999999999999999999976
Q ss_pred C-CcEEEEeCccCcccccC---C----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHH
Q psy12791 173 P-DILLVLDNTFLTAYYQK---S----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFD 244 (393)
Q Consensus 173 ~-~~~livDea~~~~~~~~---~----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (393)
+ |+++|+||+|+.+.... . ...+.++++.|+||++ |++|+|+||++++ +++.+.++.... ....++..
T Consensus 185 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~l~~~~~--~~~~~~~~ 260 (363)
T 3ffh_A 185 PSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIY-GLASARVGYGIAD-KEIIRQLNIVRP--PFNTTSIG 260 (363)
T ss_dssp CTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTT-CCSSCCCEEEEEC-HHHHHHHHHTCC--SCCCBHHH
T ss_pred CCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhh-cCchhceeeeecC-HHHHHHHHHhCC--CCCCCHHH
Confidence 3 89999999999654311 1 1134569999999999 7999999999996 888888765544 23455665
Q ss_pred HHHHHhccC---CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHH
Q psy12791 245 CWLVTRGLK---TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIF 321 (393)
Q Consensus 245 ~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
+..+...++ .+...+++..++++.+.+.|++++++. + .+. .+.++++.++.+ ...+
T Consensus 261 ~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~----------------~~~~~~~~~~~~---~~~~ 319 (363)
T 3ffh_A 261 QKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVK-L-YPA----------------NGNFVLIDLGIE---AGTI 319 (363)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCE-E-CCC----------------CSSEEEEECSSC---HHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCce-E-CCC----------------CCeEEEEECCCC---HHHH
Confidence 555554443 244556666777888888888765543 2 222 256788888533 3344
Q ss_pred HHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 322 LESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 322 ~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.+.+...++.+..|..+. . ++++|+|++ ++++++.+.++|+++
T Consensus 320 ~~~l~~~gi~v~~g~~~~----------------------~-~~~iRis~~---~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 320 FSYLEKNGYITRSGAALG----------------------F-PTAVRITIG---KEEDNSAVIALLEKL 362 (363)
T ss_dssp HHHHHHTTEECEETTTTT----------------------C-TTEEEEECC---CHHHHHHHHHHHHHH
T ss_pred HHHHHHCCeEEEeCccCC----------------------C-CCeEEEECC---CHHHHHHHHHHHHHh
Confidence 444444466665554321 1 589999998 777888888888764
No 20
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.8e-34 Score=271.66 Aligned_cols=310 Identities=14% Similarity=0.160 Sum_probs=231.9
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCC
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAG 97 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~g 97 (393)
.+++| +++.||+.+++.+.+++.+.+. .+..|+++...++|+++|+++|.+ +.+++++|+++ + .++..++++|
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~---~~~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~g 106 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNAN---KAHLYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSK 106 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGG---GTTSCCCTTCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTT
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHH---hhccCCCCChHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHHhCCC
Confidence 46778 8899999888887776654422 244555555589999999999975 67777776664 7 6677788999
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCC-----CCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHH--
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL-----RKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVK-- 170 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~-----~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~-- 170 (393)
|+|+++.|+|.+ +...++..|++++.++. .|++++++.+++++++|++++|+||||.++|.+++.++++
T Consensus 107 d~vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~ 182 (365)
T 3get_A 107 NAFLQAGVTFAM----YEIYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGV 182 (365)
T ss_dssp CEEEECSSCCTH----HHHHHHHHTCEEEECSSSSCCHHHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHHHHHHTS
T ss_pred CEEEEeCCChHH----HHHHHHHcCCEEEEEecCCCCCCCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHHHHHHhC
Confidence 999999999985 56667788999999997 3678999999888999999999999999999999988888
Q ss_pred hCCCcEEEEeCccCcccc--c--CCCC-------CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCC
Q psy12791 171 QHPDILLVLDNTFLTAYY--Q--KSLP-------WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVV 239 (393)
Q Consensus 171 ~~~~~~livDea~~~~~~--~--~~~~-------~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~ 239 (393)
++ |+++|+||+|+.+.+ . .+.. .+.+++++|+||++ |++|+|+||++++ +++.+.++.....+ .
T Consensus 183 ~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~~~~~~~~~--~ 257 (365)
T 3get_A 183 NE-DCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLY-GLGGLRIGYGIAN-ANIISAFYKLRAPF--N 257 (365)
T ss_dssp CT-TSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTT-SCTTTCCEEEEEC-HHHHHHHHHHSCTT--C
T ss_pred CC-CcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHh-cCcchheEEEEcC-HHHHHHHHHhcCCC--C
Confidence 67 999999999996652 1 1111 25679999999999 6999999999996 88988887655543 3
Q ss_pred CCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHH
Q psy12791 240 PSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAE 316 (393)
Q Consensus 240 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
.++..+..+...++. +...+++..++++.+.+.|+++ ++. + .+. .+.++++.+++.
T Consensus 258 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~-~~~----------------~~~~~~~~~~~~-- 316 (365)
T 3get_A 258 VSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIK-I-IDS----------------YTNFITYFFDEK-- 316 (365)
T ss_dssp SCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCC----------------SSSEEEEECSSS--
T ss_pred cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCE-E-CCC----------------CCeEEEEECCCC--
Confidence 556665555555544 4455666777788888888876 332 2 222 256788888542
Q ss_pred HHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 317 ETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
....+.+.|...++.+..|..+ + ++++|+|++ ++++++.+.++|+++.
T Consensus 317 ~~~~~~~~l~~~gi~v~~g~~~----------------------~--~~~iRis~~---~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 317 NSTDLSEKLLKKGIIIRNLKSY----------------------G--LNAIRITIG---TSYENEKFFTEFDKIL 364 (365)
T ss_dssp CHHHHHHHHHTTTEECEECGGG----------------------T--CSEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCEEEEECccC----------------------C--CCEEEEEcC---CHHHHHHHHHHHHHHh
Confidence 3445555555456666655432 1 479999998 6777888888887754
No 21
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=9.2e-34 Score=265.61 Aligned_cols=312 Identities=14% Similarity=0.137 Sum_probs=232.1
Q ss_pred CCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhc
Q psy12791 19 SEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLL 94 (393)
Q Consensus 19 ~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~ 94 (393)
....+++| +++.||+.+++.+.+++.+.+. ...+|+++...++|+++|++++.+ +.+++++|+++ + .++..++
T Consensus 13 ~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~---~~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~ 89 (354)
T 3ly1_A 13 PSTDNPIRINFNENPLGMSPKAQAAARDAVV---KANRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYA 89 (354)
T ss_dssp CCSSSCEECSSCCCSSCCCHHHHHHHHHTGG---GTTSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHC
T ss_pred CCCCceEEccCCCCCCCCCHHHHHHHHHHHh---hCcCCCCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHh
Confidence 34457778 8899999888888877655433 244556788899999999999975 67777777665 7 6677778
Q ss_pred CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcC--CCCcEEEEecCCCCcccccCHHHHHH
Q psy12791 95 SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIK--PNTKMVWIENPTNPLMTVFDVKAISA 167 (393)
Q Consensus 95 ~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~--~~~~~v~l~~p~nptG~~~~~~~l~~ 167 (393)
++||+|+++.|+|.+ +...++..|++++.++.+ |++++++.++ +++++|++++|+||||.++|.+++.+
T Consensus 90 ~~gd~vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~ 165 (354)
T 3ly1_A 90 SLEAQLVIPELTYGD----GEHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEP 165 (354)
T ss_dssp CTTCEEEEESSSCTH----HHHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHH
T ss_pred CCCCeEEECCCCchH----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHH
Confidence 999999999999985 566678889999999987 8999999998 78999999999999999999888888
Q ss_pred HHHh--CCCcEEEEeCccCcccccCC----C----CC-cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc
Q psy12791 168 VVKQ--HPDILLVLDNTFLTAYYQKS----L----PW-GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM 236 (393)
Q Consensus 168 l~~~--~~~~~livDea~~~~~~~~~----~----~~-~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~ 236 (393)
+++. + |+++|+||+|+.+..... . .. +.+++++|+||++ |++|+|+||++++ +++.+.++.....
T Consensus 166 l~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~~~~~~~~- 241 (354)
T 3ly1_A 166 WIASKPA-NTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIH-AMAGMRVGYAVAH-PTVIALMGRYVAG- 241 (354)
T ss_dssp HHHTCCT-TEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTT-CCGGGCCEEEECC-HHHHHHHGGGTTC-
T ss_pred HHHhCCC-CeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhc-cChhhhheeeecC-HHHHHHHHHhcCC-
Confidence 8887 8 999999999997654321 1 12 5679999999999 7999999999996 8888887655443
Q ss_pred CCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC
Q psy12791 237 GVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG 313 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
...++..+..+...++. +...+++..++++.+.+.|+++ ++. + .+. .+.++++.+++
T Consensus 242 -~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~-~-~~~----------------~~~~~~~~~~~ 301 (354)
T 3ly1_A 242 -EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLP-Y-LPS----------------EGNFVFHQLVV 301 (354)
T ss_dssp -SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCC----------------CSSEEEEECSS
T ss_pred -CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCC----------------CceEEEEECCC
Confidence 35566666666666655 4445666677777888888764 222 1 111 25678888853
Q ss_pred CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 314 GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 314 ~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+. ..+.+.|...++.+. |..+ ..++++|+|++ ++++++.+.++|+++.
T Consensus 302 ~~---~~~~~~l~~~gi~v~-g~~~-----------------------~~~~~iRis~~---~~~~i~~~~~~l~~~l 349 (354)
T 3ly1_A 302 PL---KDYQTHMADAGVLIG-RAFP-----------------------PADNWCRISLG---TPQEMQWVADTMREFR 349 (354)
T ss_dssp CH---HHHHHHHHHTTEECC-CCCT-----------------------TCTTEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred CH---HHHHHHHHHCCEEEe-ecCC-----------------------CCCCEEEEEcC---CHHHHHHHHHHHHHHH
Confidence 33 334444433455555 3321 02689999987 5667788888877654
No 22
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.7e-33 Score=260.56 Aligned_cols=306 Identities=15% Similarity=0.139 Sum_probs=223.9
Q ss_pred CCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-HHHHHHhcCCC
Q psy12791 21 PDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-VTAVTHLLSAG 97 (393)
Q Consensus 21 ~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l~~~~~~~~~g 97 (393)
+.+.++ ++|+||+++++.+.+++.+... .+.+|++++..++|+++|++++.+ ++|++++|+++ +.++...+ +|
T Consensus 15 ~~~~i~l~~n~~~~~~~~~v~~a~~~~~~---~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~-~g 90 (337)
T 3p1t_A 15 AAQAVCLAFNENPEAVEPRVQAAIAAAAA---RINRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF-SS 90 (337)
T ss_dssp CCCCEECSSCCCCSCCCHHHHHHHHHHGG---GTTSCCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS-TT
T ss_pred CCCceEeeCCCCCCCCCHHHHHHHHHhhh---hhccCCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc-CC
Confidence 446777 8999999999888776654422 345567889999999999999987 68999999886 64444444 99
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 172 (393)
|+|++++|+|.+ +...++..|++++.++.+ |++++++. .+++++++++|+||||.++|.+++.++|+++
T Consensus 91 d~vl~~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~ 164 (337)
T 3p1t_A 91 MRFVTAWPGFDG----YRARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELDQLRQRA 164 (337)
T ss_dssp SEEEEESSSCSH----HHHHHTTSCCEEEEECBCTTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHHHHHHHHHHC
T ss_pred CeEEEeCCCcHH----HHHHHHHcCCEEEEecCCCCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHHHHHHHHHhC
Confidence 999999999985 667788899999999865 78888876 4689999999999999999999999999999
Q ss_pred CCcEEEEeCccCcccccCC--CC-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHH
Q psy12791 173 PDILLVLDNTFLTAYYQKS--LP-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVT 249 (393)
Q Consensus 173 ~~~~livDea~~~~~~~~~--~~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (393)
+. +|+||+|..+..... .. .+.+++++|+||++ |++|+|+||++++ +++++.++.... ....+...+..+.
T Consensus 165 -~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~~~-~~~~~~l~~~~~--~~~~~~~~~~a~~ 238 (337)
T 3p1t_A 165 -GK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSY-GLAGLRLGALFGP-SELIAAMKRKQW--FCNVGTLDLHALE 238 (337)
T ss_dssp -SE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTT-CCTTTCCEEEECC-HHHHHHHHTTSC--TTCSCHHHHHHHH
T ss_pred -Cc-EEEECCChhhccccccccccCCCEEEEeeCchhc-cCcchheEEEEeC-HHHHHHHHhhcC--CCCCCHHHHHHHH
Confidence 86 566999987543322 12 35689999999999 7999999999997 888887765432 2334455554444
Q ss_pred hccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcC
Q psy12791 250 RGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLL 326 (393)
Q Consensus 250 ~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 326 (393)
..++. +..++++..++++.+.+.|+++ ++. + .+. .++++++... +.+... +.+.
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~----------------~~~~~~~~~~-~~~~~~---~~l~ 295 (337)
T 3p1t_A 239 AALDNDRAREAHIAKTLAQRRRVADALRGL-GYR-V-ASS----------------EANFVLVENA-AGERTL---RFLR 295 (337)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-B-CCC----------------SSSEEEEECT-TTHHHH---HHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCE-E-CCC----------------CCeEEEEEcC-CHHHHH---HHHH
Confidence 44443 3445666667777888888765 322 1 111 2567888774 333333 3333
Q ss_pred ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 327 IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 327 ~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..++.+..|..+. .++++|+|++ ++++++.+.++|+++.
T Consensus 296 ~~gi~v~~g~~~~-----------------------~~~~iRis~~---~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 296 ERGIQVKDAGQFG-----------------------LHHHIRISIG---REEDNDRLLAALAEYS 334 (337)
T ss_dssp HTTEECEEGGGGT-----------------------CCSEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred HCCeEEEECccCC-----------------------CCCeEEEecC---CHHHHHHHHHHHHHHh
Confidence 3456665554321 1479999998 5778889999988764
No 23
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=1.3e-33 Score=265.69 Aligned_cols=326 Identities=17% Similarity=0.190 Sum_probs=229.2
Q ss_pred CCCCccceeeccCCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccH
Q psy12791 6 QDTAFATKAVHIGSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSG 83 (393)
Q Consensus 6 ~~~~~~~~~~~~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G 83 (393)
|+..+...+...|....+++| +++.+|+++++.+.+++.+.+.. ..+|+++...++|+++|++++.+ +.+++++|
T Consensus 8 ~g~~~~~~~~~~~~~~~~~idl~~~~~~~~~~~~v~~a~~~~~~~---~~~y~~~~~~~l~~~la~~~~~~~~~v~~~~g 84 (364)
T 1lc5_A 8 HGGNIREPATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDC---IERYPDADYFHLHQALARHHQVPASWILAGNG 84 (364)
T ss_dssp SSCCCHHHHHHHTSCGGGSEECSSCCCTTCCCHHHHHHHHHTGGG---GGSCCCTTCHHHHHHHHHHHTSCGGGEEEESS
T ss_pred CCccHHHHHHhcCCCccceEEeccccCCCCCCHHHHHHHHHHHHH---hhcCCCCCHHHHHHHHHHHHCcCHHHEEECCC
Confidence 444444433344555556788 88888888777776655444322 33455667899999999999986 67888887
Q ss_pred HHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCC------HHHHHhhcCCCCcEEEEecCCCC
Q psy12791 84 LGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRK------IENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 84 ~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d------~~~l~~~l~~~~~~v~l~~p~np 155 (393)
+++ + .++..+ +||+|+++.|+|++ +...++..|.+++.++.+. ++++.+.+.+++++|++++|+||
T Consensus 85 ~~~al~~~~~~~--~gd~vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~i~~p~np 158 (364)
T 1lc5_A 85 ETESIFTVASGL--KPRRAMIVTPGFAE----YGRALAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNP 158 (364)
T ss_dssp HHHHHHHHHHHH--CCSEEEEEESCCTH----HHHHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTT
T ss_pred HHHHHHHHHHHc--CCCeEEEeCCCcHH----HHHHHHHcCCeEEEEeCCcccccchhHHHHHhccCCCCEEEEeCCCCC
Confidence 665 6 444445 78999999999985 5666778899999988752 35455666677999999999999
Q ss_pred cccccC---HHHHHHHHHhCCCcEEEEeCccCccccc--CCC----CCcCcEEEEcccccccCCCCceEEEEE-ecChHH
Q psy12791 156 LMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQ--KSL----PWGVDIVLYSLTKYMNGHSDVVMGATV-TNDDSL 225 (393)
Q Consensus 156 tG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~--~~~----~~~~di~~~S~sK~~~G~~G~r~G~~~-~~~~~~ 225 (393)
||.++| +++|.++|+++ |+++|+||+|+.+... ... ..+++++++|+||++ |++|+|+||++ ++ +++
T Consensus 159 tG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~ 235 (364)
T 1lc5_A 159 TGLLPERPLLQAIADRCKSL-NINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFY-AIPGLRLGYLVNSD-DAA 235 (364)
T ss_dssp TCCCCCHHHHHHHHHHHHHH-TCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTT-TCTTTCCEEEECCC-HHH
T ss_pred CCCCCCHHHHHHHHHHhhhc-CcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhh-cCCccceEEEEECC-HHH
Confidence 999999 88999999999 9999999999976531 111 146789999999999 68999999999 76 888
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCC
Q psy12791 226 QARLKFLQNSMGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSG 302 (393)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 302 (393)
++.++.... ....++..+..+...++. +...+++..++++.+.+.|+++|++. + .+.
T Consensus 236 ~~~l~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~---------------- 295 (364)
T 1lc5_A 236 MARMRRQQM--PWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLT-V-YPG---------------- 295 (364)
T ss_dssp HHHHHHHSC--TTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEE-E-CCC----------------
T ss_pred HHHHHHhCC--CCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCE-E-CCC----------------
Confidence 888766543 234566676666666665 33455556677788888888776653 2 222
Q ss_pred CcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHH
Q psy12791 303 TSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIAD 382 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~ 382 (393)
.+.++++.++++ ...+.+.+...++.+..|..+.. ..++++|+|++. +++++.
T Consensus 296 ~g~~~~~~~~~~---~~~l~~~l~~~gi~v~~g~~~~~---------------------~~~~~iRis~~~---~~~~~~ 348 (364)
T 1lc5_A 296 RANYLLLRCERE---DIDLQRRLLTQRILIRSCANYPG---------------------LDSRYYRVAIRS---AAQNER 348 (364)
T ss_dssp SSSEEEEEESCT---TCCHHHHHHTTTEECEECTTSTT---------------------CCTTEEEEECCC---HHHHHH
T ss_pred CCeEEEEECCCc---HHHHHHHHHHCCcEEeeCcccCC---------------------CCCCEEEEEeCC---HHHHHH
Confidence 256788888532 22344444444666665543320 125899999873 455666
Q ss_pred HHHHHHHh
Q psy12791 383 LDQALRKA 390 (393)
Q Consensus 383 l~~al~~~ 390 (393)
+.++|+++
T Consensus 349 l~~~l~~~ 356 (364)
T 1lc5_A 349 LLAALRNV 356 (364)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666654
No 24
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=2.9e-33 Score=262.87 Aligned_cols=314 Identities=18% Similarity=0.222 Sum_probs=226.7
Q ss_pred CCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-HHHHHHhcCCC
Q psy12791 21 PDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-VTAVTHLLSAG 97 (393)
Q Consensus 21 ~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l~~~~~~~~~g 97 (393)
..+++| +++.||+.+++.+.+++.+.+. .+.+|+++...++|+++|++++.+ +.+++++|+++ +.++...+
T Consensus 25 ~~~~idl~~~~~~~~~~~~v~~a~~~~~~---~~~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~--- 98 (361)
T 3ftb_A 25 GRELLDYSSNINPLGIPKSFLNNIDEGIK---NLGVYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF--- 98 (361)
T ss_dssp ---CEETTCCCCTTCSCHHHHTTHHHHHH---GGGSCCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC---
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHHH---HhcCCCCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc---
Confidence 356788 8899999888777766654322 245567788899999999999975 67777777665 64444444
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHH
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVV 169 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~ 169 (393)
|+|+++.|+|.+ +...++..|++++.++.+ +++++++.+++ +++|++++|+||||.++| +++|.++|
T Consensus 99 d~vi~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~ 173 (361)
T 3ftb_A 99 EKILIIVPSYAE----YEINAKKHGVSVVFSYLDENMCIDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHVLKLA 173 (361)
T ss_dssp SEEEEEESCCTH----HHHHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHHHHHHH
T ss_pred CcEEEecCChHH----HHHHHHHcCCeEEEeecCcccCCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHh
Confidence 899999999985 566677889999999865 57899999988 999999999999999998 56677778
Q ss_pred HhCCCcEEEEeCccCccccc---CCC----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCH
Q psy12791 170 KQHPDILLVLDNTFLTAYYQ---KSL----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSP 242 (393)
Q Consensus 170 ~~~~~~~livDea~~~~~~~---~~~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (393)
+++ |+++|+||+|+.+... ... ..+.+++++|+||.+ |++|+|+||++..++++.+.++..... ...++
T Consensus 174 ~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~g~~~~~~~~~~~~~~~~~~~--~~~~~ 249 (361)
T 3ftb_A 174 EEK-KKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFF-AMPGIRFGYGITNNKEIAAKIKAKQNP--WNINC 249 (361)
T ss_dssp HHH-TCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTT-SCGGGCCEEEEESCHHHHHHHHTTSCT--TCSCH
T ss_pred hhc-CCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhc-CCCCcceeEEEeCCHHHHHHHHhhCCC--CCCCH
Confidence 899 9999999999876542 111 124568999999999 699999999994448888887654442 34566
Q ss_pred HHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHH
Q psy12791 243 FDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETR 319 (393)
Q Consensus 243 ~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (393)
..+..+...++. +...+++..++.+.+.+.|++++++..+..+. ++++++.+++ ....
T Consensus 250 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-----------------~~~~~~~~~~--~~~~ 310 (361)
T 3ftb_A 250 FAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVFSPH-----------------ANFVLCRLEN--ISGE 310 (361)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEECCS-----------------SSEEEEEESS--SCHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceecCCC-----------------CeEEEEEcCC--CCHH
Confidence 777666666665 33455666777888889998887764232222 5788888853 2334
Q ss_pred HHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 320 IFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 320 ~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
.+.+.+...++.+..|..+. +..++++|+|++ ++++++.+.++|+++.+
T Consensus 311 ~l~~~l~~~gi~v~~g~~~~---------------------~~~~~~iRis~~---~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 311 KLYDSLLKEDIVIRRCCNFI---------------------GLDDSFVRFAIK---DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp HHHHHHHTTTEECEECTTST---------------------TCCTTEEEEECC---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEeeCccCC---------------------CCCCCEEEEEcC---CHHHHHHHHHHHHHHHh
Confidence 45555544466666655432 112689999997 55566777777776643
No 25
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-33 Score=266.33 Aligned_cols=315 Identities=16% Similarity=0.183 Sum_probs=230.2
Q ss_pred CCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCC-C-cEEEeccHHHH-H-HHHHHhcC
Q psy12791 21 PDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEA-K-HGLCYSSGLGA-V-TAVTHLLS 95 (393)
Q Consensus 21 ~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~-~-~~i~~~~G~~a-l-~~~~~~~~ 95 (393)
+.+.+| +++.||+.+++.+.+++.+.+.. ..+.+|+++...++|+++|+++|. + +.+++++|+++ + .++..+++
T Consensus 29 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~ 107 (367)
T 3euc_A 29 SHGLVKLDAMENPYRLPPALRSELAARLGE-VALNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAAR 107 (367)
T ss_dssp CTTCEECCSSCCCCCCCHHHHHHHHHHHHH-HHTTCSCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTCC
T ss_pred CCCeeEccCCCCCCCCCHHHHHHHHHHhhh-hhhhcCCCCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHcC
Confidence 456778 88999998887777665443211 134556677889999999999998 4 68888888775 7 66777889
Q ss_pred CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC-CCcEEEEecCCCCcccccCH---HHHH
Q psy12791 96 AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDV---KAIS 166 (393)
Q Consensus 96 ~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~---~~l~ 166 (393)
+||+|+++.|+|.+ +...++..|++++.++.+ |++++++.+++ ++++|++++||||||.+++. ++|.
T Consensus 108 ~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~ 183 (367)
T 3euc_A 108 PGAKVMAPVPGFVM----YAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIV 183 (367)
T ss_dssp TTCEEEEEESCSCC----SCHHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CCCEEEEcCCCHHH----HHHHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 99999999999986 455567889999999865 89999999987 89999999999999999974 4555
Q ss_pred HHHHhCC-CcEEEEeCccCcccccCCC----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCC
Q psy12791 167 AVVKQHP-DILLVLDNTFLTAYYQKSL----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPS 241 (393)
Q Consensus 167 ~l~~~~~-~~~livDea~~~~~~~~~~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (393)
++|++++ |+++|+||+|+.+...... ..+.++++.|+||+ |++|+|+||++++ +++.+.++..... ...+
T Consensus 184 ~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~--~~~G~r~G~~~~~-~~~~~~~~~~~~~--~~~~ 258 (367)
T 3euc_A 184 RAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL--GLAGIRLGYVAGD-PQWLEQLDKVRPP--YNVN 258 (367)
T ss_dssp HHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT--TSCSCCEEEEEEC-HHHHHHHGGGCCS--SCCC
T ss_pred HhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh--cccccCceeeeeC-HHHHHHHHHhCCC--CCCC
Confidence 5566652 6999999999975432211 23567999999999 4899999999997 8888877544332 2356
Q ss_pred HHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHH
Q psy12791 242 PFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEET 318 (393)
Q Consensus 242 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
+..+..+...++. +...+++..++++.+.+.|+++|++. + .+. .+.++++.++ + .
T Consensus 259 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~----------------~~~~~~~~~~-~---~ 316 (367)
T 3euc_A 259 VLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVT-V-FPS----------------AANFLLARVP-D---A 316 (367)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCE-E-CCC----------------SSSEEEEECS-C---H
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCC----------------CCeEEEEECC-C---H
Confidence 6666655555554 34556667778888888998877654 2 222 2567888884 3 3
Q ss_pred HHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 319 RIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 319 ~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.+.+.+...++.+..|+.+.. ..++++|+|++ ++++++.+.++|+++.
T Consensus 317 ~~l~~~l~~~gi~v~~~~~~~~---------------------~~~~~iRis~~---~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 317 AQTFDRLLARKVLIKNVSKMHP---------------------LLANCLRVTVS---TPEENAQFLEAFAASL 365 (367)
T ss_dssp HHHHHHHHTTTEECEECGGGCG---------------------GGTTEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCeEEEECCccCC---------------------CCCCEEEEecC---CHHHHHHHHHHHHHHh
Confidence 3455555555666665544310 12689999987 7778889988888764
No 26
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=2e-33 Score=266.47 Aligned_cols=316 Identities=16% Similarity=0.143 Sum_probs=215.1
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh----CC---CcEEEeccHHHH-H-HHH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE----EA---KHGLCYSSGLGA-V-TAV 90 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~----~~---~~~i~~~~G~~a-l-~~~ 90 (393)
.+.++ +.+.+++.+++.+.+++.+.+... ...|+. .+..++|+++|+++ |. +++|++|+|+++ + .++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~ 108 (385)
T 1b5p_A 31 VDLVALTAGEPDFDTPEHVKEAARRALAQG--KTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLF 108 (385)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTT--CCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHH
Confidence 35667 777787776665554432221111 123333 45788999999987 32 367888888665 7 677
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC--
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD-- 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~-- 161 (393)
.+++++||+|+++.|+|++ +...++..|++++.++.+ |++++++++.+++++|++++||||||.+++
T Consensus 109 ~~l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~ 184 (385)
T 1b5p_A 109 QAILDPGDEVIVLSPYWVS----YPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKE 184 (385)
T ss_dssp HHHCCTTCEEEEEESCCTH----HHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHH
Confidence 7788999999999999984 667778889999998873 688999999888999999999999999998
Q ss_pred -HHHHHHHHHhCCCcEEEEeCccCcccccC---C-CCC--cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH
Q psy12791 162 -VKAISAVVKQHPDILLVLDNTFLTAYYQK---S-LPW--GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN 234 (393)
Q Consensus 162 -~~~l~~l~~~~~~~~livDea~~~~~~~~---~-~~~--~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~ 234 (393)
+++|.++|+++ |++||+||+|+.+.+.. + ... +++++++||||.+ |++|+|+||++++ +++++.+.....
T Consensus 185 ~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-~~~G~RiG~~~~~-~~~~~~l~~~~~ 261 (385)
T 1b5p_A 185 VLEALARLAVEH-DFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAF-AMTGWRIGYACGP-KEVIKAMASVSR 261 (385)
T ss_dssp HHHHHHHHHHHT-TCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTT-TCGGGCCEEEECC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhc-CCcccceEEEEeC-HHHHHHHHHHHh
Confidence 88899999999 99999999999865421 1 112 5689999999999 6999999999997 888888877665
Q ss_pred hcCCCCCHHHHHHHHhccCC-------HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceE
Q psy12791 235 SMGVVPSPFDCWLVTRGLKT-------LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGML 307 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 307 (393)
......+...+..+...++. +...++++.++++.+.+.|+++ ++. +..|. .+.++
T Consensus 262 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~ 323 (385)
T 1b5p_A 262 QSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLK-AVRPS----------------GAFYV 323 (385)
T ss_dssp TTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCC-BCCCS----------------BTTEE
T ss_pred hccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCC----------------eeEEE
Confidence 54445555555544444422 3344556666777778888764 332 11111 12356
Q ss_pred EEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 308 SFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
++.++........+.+.+...++.+..|..+. . ++++|+|++ ++++.++...+.|
T Consensus 324 ~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~----------------------~-~~~iRis~~--~~~~~i~~~l~~l 378 (385)
T 1b5p_A 324 LMDTSPIAPDEVRAAERLLEAGVAVVPGTDFA----------------------A-FGHVRLSYA--TSEENLRKALERF 378 (385)
T ss_dssp EEECTTTCSSHHHHHHHHHHTTEECEESGGGT----------------------C-TTEEEEECC--SCHHHHHHHHHHG
T ss_pred EEecCCCCCCHHHHHHHHHHCCeEEecccccC----------------------C-CCeEEEEec--CCHHHHHHHHHHH
Confidence 77774100123344444444466666654331 0 479999998 4555444444444
Q ss_pred HH
Q psy12791 388 RK 389 (393)
Q Consensus 388 ~~ 389 (393)
.+
T Consensus 379 ~~ 380 (385)
T 1b5p_A 379 AR 380 (385)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 27
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=4.6e-33 Score=261.62 Aligned_cols=315 Identities=15% Similarity=0.149 Sum_probs=225.2
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHH-HH-HHHHHhcCC
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLG-AV-TAVTHLLSA 96 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~-al-~~~~~~~~~ 96 (393)
.+++| +++.||+.+++.+.+++.+.+.. ...+..|+++...++|+++|+++|.+ +.+++++|++ ++ .++..++++
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~~~ 105 (360)
T 3hdo_A 26 ASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAAE 105 (360)
T ss_dssp TTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCT
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHhCC
Confidence 35678 89999998888877765443222 12245566677799999999999975 5666666655 57 777788899
Q ss_pred CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCc
Q psy12791 97 GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDI 175 (393)
Q Consensus 97 gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~ 175 (393)
||+|+++.|+|.+ +...++..|++++.++.++-..+++... .+++++++++|+||||.++|.+++.++|+++ |+
T Consensus 106 gd~Vl~~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~-~~ 180 (360)
T 3hdo_A 106 GEEIGYVHPSYSY----YGTLAEVQGARVRTFGLTGDFRIAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRC-AG 180 (360)
T ss_dssp TCEEEEESSSCTH----HHHHHHHHTCEEEEECBCTTSSBTTCCSSBCSSEEEEESSCTTTCCCCCHHHHHHHHHHB-SS
T ss_pred CCEEEEcCCChHH----HHHHHHHCCCEEEEeeCCCCCCHHHHHhhcCCCEEEEeCCCCCCCCCcCHHHHHHHHHHC-CC
Confidence 9999999999985 5566778899999998863212222222 1478999999999999999999999999999 99
Q ss_pred EEEEeCccCcccccCCCC----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Q psy12791 176 LLVLDNTFLTAYYQKSLP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRG 251 (393)
Q Consensus 176 ~livDea~~~~~~~~~~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (393)
++|+||+|+.+....... .+.+++++|+||++ |++|+|+||++++ +++.+.++..... ...++..+..+...
T Consensus 181 ~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~~~~~~~~--~~~~~~~~~a~~~~ 256 (360)
T 3hdo_A 181 MLVLDETYAEFAESNALELVRRHENVVVTRTLSKSY-SLAGMRIGLAIAR-PEVIAALDKIRDH--YNLDRLAQAACVAA 256 (360)
T ss_dssp EEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTT-SCTTSCCEEEECC-HHHHHHHHHHSCS--CCSCHHHHHHHHHH
T ss_pred EEEEECChHhhCCcchhHHhccCCCEEEEecchHhh-cCCccceeeEeeC-HHHHHHHHHhCCC--CCCCHHHHHHHHHH
Confidence 999999999753322211 35679999999999 6999999999996 8888888765543 34556665555444
Q ss_pred cCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc
Q psy12791 252 LKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF 328 (393)
Q Consensus 252 ~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (393)
++. +...+++..++++.+.+.|+++ ++. + .+. .+.++++.+++ ...+.+.+.+...
T Consensus 257 l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~----------------~~~~~~~~~~~--~~~~~l~~~l~~~ 315 (360)
T 3hdo_A 257 LRDQAYLSECCRRIRETREWFTTELRSI-GYD-V-IPS----------------QGNYLFATPPD--RDGKRVYDGLYAR 315 (360)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCC----------------SSSEEEEECTT--CCHHHHHHHHHHT
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-cCC----------------CccEEEEECCC--CCHHHHHHHHHHC
Confidence 443 4455666777788888888876 332 2 121 25678888753 1233444444444
Q ss_pred ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 329 RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 329 ~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
++.+..++. + ..++++|+|++ ++++++.+.++|+++.+
T Consensus 316 gi~v~~~~~------~-----------------~~~~~iRis~~---~~~e~~~l~~al~~~~~ 353 (360)
T 3hdo_A 316 KVLVRHFSD------P-----------------LLAHGMRISIG---TREEMEQTLAALKEIGE 353 (360)
T ss_dssp TEECBCCCS------T-----------------TTTTSEEEECC---CHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCC------C-----------------CCCCEEEEEcC---CHHHHHHHHHHHHHHhc
Confidence 555554332 0 11589999998 78888999999998764
No 28
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=2.6e-32 Score=258.37 Aligned_cols=323 Identities=12% Similarity=0.151 Sum_probs=228.0
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCC-CCccccCCCCchHHHHHHHHHHHhC--CC-cEEEeccHHHH-H-HHHHHhc
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPP-QGFEYSRSNNPTRRNLERCIASLEE--AK-HGLCYSSGLGA-V-TAVTHLL 94 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~lr~~la~~~~--~~-~~i~~~~G~~a-l-~~~~~~~ 94 (393)
.+++| +.+.+++.+++.+.+++.+.+. ..+.|+....+..+++++.+++.+| .+ +.+++++|+++ + .++..++
T Consensus 24 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~ 103 (383)
T 3kax_A 24 EELIHAWIADMDFEVPQPIQTALKKRIEHPIFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFT 103 (383)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHC
T ss_pred CCeeecccccCCCCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhC
Confidence 46677 7788888888777766544322 1345655455667777777887777 33 66777777665 7 6777788
Q ss_pred CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HH
Q psy12791 95 SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VK 163 (393)
Q Consensus 95 ~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~ 163 (393)
++||+|+++.|+|.+ +...++..|.+++.++.+ |++++++.+.+++++|++++|+||||.++| ++
T Consensus 104 ~~gd~vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~ 179 (383)
T 3kax_A 104 KENESVLVQPPIYPP----FFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWKKEELT 179 (383)
T ss_dssp CTTCEEEECSSCCHH----HHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCCHHHHH
T ss_pred CCCCEEEEcCCCcHH----HHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcCHHHHH
Confidence 999999999999985 556678889999999873 789999999888999999999999999998 55
Q ss_pred HHHHHHHhCCCcEEEEeCccCcccccC----CC---C---CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH
Q psy12791 164 AISAVVKQHPDILLVLDNTFLTAYYQK----SL---P---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ 233 (393)
Q Consensus 164 ~l~~l~~~~~~~~livDea~~~~~~~~----~~---~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~ 233 (393)
+|.++|+++ |+++|+||+|+.+.... ++ . .+.++++.|+||.+ |++|+|+||++++++++.+.++...
T Consensus 180 ~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~ 257 (383)
T 3kax_A 180 KLGSLCTKY-NVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTF-NIAGLQASIIIIPNEKLRQAFTSIQ 257 (383)
T ss_dssp HHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHH-TCGGGCCEEEECCCHHHHHHHHHHH
T ss_pred HHHHHHHHC-CCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhc-cCcchhheEEEeCCHHHHHHHHHHH
Confidence 566669999 99999999999755421 11 1 14569999999999 6999999999986688988887766
Q ss_pred HhcCC-CCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhh-CCCcceEeCCCCCCCcchHHHhhhcCCCcceE
Q psy12791 234 NSMGV-VPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLES-HPCVKGVLHPGLPSHPNHELAKSQWSGTSGML 307 (393)
Q Consensus 234 ~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~-~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 307 (393)
..++. ..++..+..+...++. +...+++..++.+.+.+.|++ +|++. +..+. .+.++
T Consensus 258 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~----------------~~~~~ 320 (383)
T 3kax_A 258 YRQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPTLS-VMKPE----------------GSFLL 320 (383)
T ss_dssp HHTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE-ECCCS----------------BSSEE
T ss_pred hhcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCC----------------ceEEE
Confidence 55443 5566666665555554 444566667778888888876 56653 22221 12345
Q ss_pred EEEEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHH
Q psy12791 308 SFYVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQA 386 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a 386 (393)
++.++........+.+.|. ..++.+..|..+.. ..++++|+|++. ++++++.+.+.
T Consensus 321 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------------------~~~~~iRi~~~~--~~~~i~~~l~~ 377 (383)
T 3kax_A 321 WIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGL---------------------GGEEHIGINIGC--PRSVLEEILNR 377 (383)
T ss_dssp EEECGGGCCCHHHHHHHHHHTSCEECEESGGGCT---------------------TCTTEEEEECSS--CHHHHHHHHHH
T ss_pred EEEccccCCCHHHHHHHHHhhCCEEeECchhhcC---------------------CCCCeEEEEEcC--CHHHHHHHHHH
Confidence 6777421113445555553 45666666654321 125899999983 56666666666
Q ss_pred HHHh
Q psy12791 387 LRKA 390 (393)
Q Consensus 387 l~~~ 390 (393)
|+++
T Consensus 378 l~~~ 381 (383)
T 3kax_A 378 LRHT 381 (383)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 29
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=4.1e-33 Score=260.87 Aligned_cols=310 Identities=14% Similarity=0.191 Sum_probs=222.7
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCC
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAG 97 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~g 97 (393)
.+++| ++|.||+.+++.+.+++.+.+ ..+..|+++...++|+++|++++.+ +.+++++|+++ + .++..+. |
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~---~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~--g 89 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENL---NCIRHYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR--G 89 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTG---GGGGSCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT--T
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhH---hHHhcCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC--C
Confidence 56788 899999998888777665543 3455666666689999999999986 67888888775 6 5555555 9
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCC-CCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcE
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL-RKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDIL 176 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~-~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~ 176 (393)
|+|+++.|+|.+ +...++..|++++.++. ++.+.+.. +++++|++++|+||||.++|.+++.++++.++..+
T Consensus 90 d~Vi~~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~ 162 (350)
T 3fkd_A 90 SRSLIAIPSFAE----YEDACRMYEHEVCFYPSNEDIGEADF---SNMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTT 162 (350)
T ss_dssp CEEEEEESCCHH----HHHHHHHTTCEEEEEETTSCGGGSCC---TTCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSE
T ss_pred CEEEEeCCCcHH----HHHHHHHcCCeEEEEecCCccccCcc---CCCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCE
Confidence 999999999985 56677889999999998 54333321 57999999999999999999999999999982379
Q ss_pred EEEeCccCcccccCCC------CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHh
Q psy12791 177 LVLDNTFLTAYYQKSL------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTR 250 (393)
Q Consensus 177 livDea~~~~~~~~~~------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (393)
+|+||+|+.+...... ..+.+++++|+||++ |++|+|+||++++ +++.+.++..... ...++..+..+..
T Consensus 163 li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~ 238 (350)
T 3fkd_A 163 FVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAY-GIPGLRIGYIVAN-KDFMKRVAAFSTP--WAVNALAIEAAKF 238 (350)
T ss_dssp EEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHH-SCGGGCCEEEECC-HHHHHHHHTTCCT--TCSCHHHHHHHHH
T ss_pred EEEECchhhhccCcchhhHHhhcCCCEEEEecCchhc-cCcchheEeEEeC-HHHHHHHHHhCCC--CCCCHHHHHHHHH
Confidence 9999999875543211 235679999999999 6999999999996 8888887654432 2345555444433
Q ss_pred cc---CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCc
Q psy12791 251 GL---KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLI 327 (393)
Q Consensus 251 ~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 327 (393)
.+ +.+..++++..++++.+.+.|+++|++. + .+. .+.++++.+++. ..+.+.+.|..
T Consensus 239 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~----------------~~~~~~~~~~~~--~~~~l~~~L~~ 298 (350)
T 3fkd_A 239 ILIHPAQFTLPIRKWQRNTVDFITALNRLDGVE-V-HPS----------------GTTFFLLRLKKG--TAAELKKYMLE 298 (350)
T ss_dssp HHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEE-E-CCC----------------SSSEEEEEESSS--CHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-E-CCC----------------CCcEEEEECCCC--CHHHHHHHHHH
Confidence 32 2122334444477888899998877654 2 222 256788888542 44556666654
Q ss_pred -cccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 328 -FRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 328 -~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.++.+..|..+. +..++++|+|++ ++++++.+.++|+++.
T Consensus 299 ~~gi~v~~g~~f~---------------------~~~~~~iRis~~---~~~~~~~l~~al~~~~ 339 (350)
T 3fkd_A 299 EYNMLIRDASNFR---------------------GLDESYVRITTQ---RPAQNQLFIKALETFL 339 (350)
T ss_dssp TTCEECEECTTST---------------------TCCTTEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred HCCEEEEeCccCC---------------------CCCCCEEEEEcC---CHHHHHHHHHHHHHHH
Confidence 577777665542 112689999997 5556677777777664
No 30
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=4.3e-32 Score=260.95 Aligned_cols=328 Identities=15% Similarity=0.151 Sum_probs=224.5
Q ss_pred eccCCCCCCCCC-CCCCCCCccCCeeeeCCCCCC---------CCCccccCCCCc-hHHHHHHHHHHHhC--------CC
Q psy12791 15 VHIGSEPDQWRS-QCVIPPIILSTTFKQNTPGQP---------PQGFEYSRSNNP-TRRNLERCIASLEE--------AK 75 (393)
Q Consensus 15 ~~~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~---------~~~~~y~~~~~~-~~~~lr~~la~~~~--------~~ 75 (393)
.|..-.+..++| ++|+||+.++ .+.+.+.+.. .......+|+++ +..++|+++|++++ .+
T Consensus 29 ~~~~~~~~~~i~l~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~ 107 (428)
T 1iay_A 29 FHPLKNPNGVIQMGLAENQLCLD-LIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFD 107 (428)
T ss_dssp CCSSSSTTSBEECSSCCCCSSHH-HHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCC
T ss_pred CCcccCCCceeeeccccchhhHH-HHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCC
Confidence 444444456778 8899999765 3332221110 011123556655 48899999999986 43
Q ss_pred -cEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHH-hcccCCcEEEeeCCC-------CHHHHHhhcCC--
Q psy12791 76 -HGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQ-VAPKIGLEVDFVDLR-------KIENLIKYIKP-- 142 (393)
Q Consensus 76 -~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~-~~~~~g~~v~~~~~~-------d~~~l~~~l~~-- 142 (393)
+.+++++|+++ + .++..++++||+|+++.|+|++ +.. ++...|++++.++.+ |++++++.+.+
T Consensus 108 ~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~----~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 183 (428)
T 1iay_A 108 PERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPA----FNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQ 183 (428)
T ss_dssp TTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTT----HHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHH
T ss_pred hhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcc----hHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHH
Confidence 68888888776 7 6777788999999999999986 333 345789999999863 68888887752
Q ss_pred ----CCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC-CC-C-----Cc-------Cc--EE
Q psy12791 143 ----NTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK-SL-P-----WG-------VD--IV 199 (393)
Q Consensus 143 ----~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~-~~-~-----~~-------~d--i~ 199 (393)
++++|++++||||||.++| +++|.++|+++ |+++|+||+|..+.+.. .. . .. .| ++
T Consensus 184 ~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv 262 (428)
T 1iay_A 184 KSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQH-NIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHI 262 (428)
T ss_dssp HTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTT-TCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEE
T ss_pred hcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHC-CeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEE
Confidence 6899999999999999999 88999999999 99999999999854321 11 1 11 45 89
Q ss_pred EEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCH-------HHHHHHHHHHHHHHHHH
Q psy12791 200 LYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTL-------PCRLKEHERGSIEVAKF 272 (393)
Q Consensus 200 ~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~ 272 (393)
+.|+||++ |++|+|+||++++++++++.++.....+ ..++..+..+...++.. ...++++.++.+.+.+.
T Consensus 263 ~~s~sK~~-g~~Glr~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 339 (428)
T 1iay_A 263 VYSLSKDM-GLPGFRVGIIYSFNDDVVNCARKMSSFG--LVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNG 339 (428)
T ss_dssp EEESTTTS-SCGGGCEEEEEESCHHHHHHHHHHHTTS--CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Eecchhhc-CCCCceEEEEEeCCHHHHHHHHHHHhcc--cCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 6999999999996588888887654432 34556666666666552 23444555667777888
Q ss_pred HhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-----HHHHHHHHHhcCc-cccccccCCccccccCccc
Q psy12791 273 LESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-----AEETRIFLESLLI-FRCAESLGGIESLADLPAE 346 (393)
Q Consensus 273 l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~-~~~~~~~g~~~s~~~~~~~ 346 (393)
|+++ ++. +..+. .+.++++.+++. ......+.+.+.. .++.+..|+.+..
T Consensus 340 L~~~-g~~-~~~~~----------------~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~------ 395 (428)
T 1iay_A 340 LEVV-GIK-CLKNN----------------AGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFEC------ 395 (428)
T ss_dssp HHHT-TCC-BCCCS----------------SSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTC------
T ss_pred HHhc-CCc-ccCCC----------------eeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCC------
Confidence 8765 332 11110 245788888421 1234456666543 3666655443211
Q ss_pred ccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 347 MTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 347 ~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..++++|++++ ..++++++.+.++|+++.
T Consensus 396 ---------------~~~~~iRis~~-~~~~e~i~~~~~~l~~~l 424 (428)
T 1iay_A 396 ---------------QEPGWFRVCFA-NMDDGTVDIALARIRRFV 424 (428)
T ss_dssp ---------------SSSSEEEEECS-SSCHHHHHHHHHHHHHHH
T ss_pred ---------------CCCCEEEEEEe-cCCHHHHHHHHHHHHHHH
Confidence 01579999999 467777788888777653
No 31
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=9.6e-33 Score=260.92 Aligned_cols=318 Identities=14% Similarity=0.093 Sum_probs=222.7
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh----CCC---c-EEEeccHHHH-H-HH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE----EAK---H-GLCYSSGLGA-V-TA 89 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~----~~~---~-~i~~~~G~~a-l-~~ 89 (393)
.+++| +++.+++++++.+.+++.+.+... ....|++ ++..++|+++|+++ |.+ + .|++++|+++ + .+
T Consensus 25 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~ 103 (376)
T 2dou_A 25 VGLIDLSIGSTDLPPPEAPLKALAEALNDP-TTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHL 103 (376)
T ss_dssp CCCEECSSCCCCCCCCHHHHHHHHHHTTCG-GGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHH
T ss_pred CCEEeccCCCCCCCCCHHHHHHHHHHHhCC-CcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHH
Confidence 35677 778888877666666554433221 2334555 47889999999988 864 4 7888888665 7 67
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC-----CCHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL-----RKIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~-----~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
+..++++||+|+++.|+|++ +...++..|.+++.++. .|++++++.+.+++++|++++|+||||.++|
T Consensus 104 ~~~l~~~gd~vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~ 179 (376)
T 2dou_A 104 LLALTEPEDLLLLPEVAYPS----YFGAARVASLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADWGY 179 (376)
T ss_dssp HHHHCCTTCEEEEESSCCHH----HHHHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHH
T ss_pred HHHhcCCCCEEEECCCCcHh----HHHHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCHHH
Confidence 77788899999999999985 55667778999999886 2677787777667899999999999999998
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC-C---CC----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK-S---LP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ 233 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~-~---~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~ 233 (393)
+++|.++|+++ |+++|+||+|+.+.+.. + .. .+.+++++|+||++ |++|+|+||++++ +++++.++...
T Consensus 180 l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~~~~ 256 (376)
T 2dou_A 180 FEEALGLARKH-GLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSY-NLAGFRLGFALGS-EEALARLERVK 256 (376)
T ss_dssp HHHHHHHHHHT-TCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHH-TCGGGCCEEEEEC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhc-CChhheeEEEecC-HHHHHHHHHHH
Confidence 67888999999 99999999999865421 1 11 25679999999999 6899999999987 88999887766
Q ss_pred HhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEE
Q psy12791 234 NSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSF 309 (393)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
..+....++..+..+...++. +...++...++.+.+.+.|+++ +. +..+. .+.++++
T Consensus 257 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~----------------~~~~~~~ 317 (376)
T 2dou_A 257 GVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LS-LLPPR----------------ATMYLWG 317 (376)
T ss_dssp HHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SE-ECCCC----------------BSSEEEE
T ss_pred HhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cC-ccCCC----------------eeEEEEE
Confidence 655555566666655555554 3334555566777788888764 22 22121 1346888
Q ss_pred EEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 310 YVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
.++. ......+.+.+...++.+..|..+.. ..++++|+|++. ++++++.+.+.|++
T Consensus 318 ~~~~-~~~~~~~~~~l~~~gi~v~~g~~f~~---------------------~~~~~~Ris~~~--~~~~i~~~l~~l~~ 373 (376)
T 2dou_A 318 RLPE-GVDDLEFGLRLVERGVALAPGRGFGP---------------------GGKGFVRIALVR--PLEELLEAAKRIRE 373 (376)
T ss_dssp ECCT-TCCHHHHHHHHHHTTEECEEGGGGCG---------------------GGTTEEEEECCS--CHHHHHHHHHHHHH
T ss_pred ECCC-CCCHHHHHHHHHHCCEEEcCchhhCC---------------------CCCCeEEEEecC--CHHHHHHHHHHHHH
Confidence 8852 11223455554433666655543321 015899999986 45666666666655
Q ss_pred h
Q psy12791 390 A 390 (393)
Q Consensus 390 ~ 390 (393)
+
T Consensus 374 ~ 374 (376)
T 2dou_A 374 A 374 (376)
T ss_dssp T
T ss_pred H
Confidence 4
No 32
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=2.2e-32 Score=257.87 Aligned_cols=315 Identities=17% Similarity=0.202 Sum_probs=222.0
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHhC------CC-cEEEeccHHH-HH-HHH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLEE------AK-HGLCYSSGLG-AV-TAV 90 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~~------~~-~~i~~~~G~~-al-~~~ 90 (393)
.+++| +++.+++++++.+.+++.+.+.. ...|+. ..+..++|+++|++++ .+ +.+++++|++ ++ .++
T Consensus 29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~ 106 (370)
T 2z61_A 29 KKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTD--SRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFAL 106 (370)
T ss_dssp CCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCC--TTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHH
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCC--CCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHH
Confidence 35667 67777776665555544332111 222331 2467889999999874 22 5666666655 57 677
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHH
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVK 170 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~ 170 (393)
..++++||+|++++|+|++ +...++..|.+++.++ .|++++++.+++++++|++++|+||||.++|.+ |.++|+
T Consensus 107 ~~~~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~v~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~-l~~~~~ 180 (370)
T 2z61_A 107 SSIIDDGDEVLIQNPCYPC----YKNFIRFLGAKPVFCD-FTVESLEEALSDKTKAIIINSPSNPLGEVIDRE-IYEFAY 180 (370)
T ss_dssp HHHCCTTCEEEEESSCCTH----HHHHHHHTTCEEEEEC-SSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHH-HHHHHH
T ss_pred HHhcCCCCEEEEeCCCchh----HHHHHHHcCCEEEEeC-CCHHHHHHhcccCceEEEEcCCCCCcCcccCHH-HHHHHH
Confidence 7788999999999999985 5566778899999998 689999999988899999999999999999999 999999
Q ss_pred hCCCcEEEEeCccCcccccC---C---C--CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCH
Q psy12791 171 QHPDILLVLDNTFLTAYYQK---S---L--PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSP 242 (393)
Q Consensus 171 ~~~~~~livDea~~~~~~~~---~---~--~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (393)
++ |+++|+||+|+.+.... + + ..++|+++.|+||++ |++|+|+||++++ +++++.++.....+....++
T Consensus 181 ~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~ 257 (370)
T 2z61_A 181 EN-IPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLY-AMTGWRIGYVISN-DEIIEAILKLQQNLFISAPT 257 (370)
T ss_dssp HH-CSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTT-TCGGGCCEEEECC-HHHHHHHHHHHHHHTSSSCH
T ss_pred Hc-CCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhcc-CCccceEEEEEEC-HHHHHHHHHHHhhcccCCCH
Confidence 99 99999999999865421 1 1 136789999999999 6999999999998 78888887766655556677
Q ss_pred HHHHHHHhccCC-----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHH
Q psy12791 243 FDCWLVTRGLKT-----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEE 317 (393)
Q Consensus 243 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (393)
..+..+...++. +...+++..++.+.+.+.|+++ ++. +..+. .+.++++.+++ .
T Consensus 258 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~---~ 316 (370)
T 2z61_A 258 ISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWE-VNNPI----------------GAYYVFPNIGE---D 316 (370)
T ss_dssp HHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCB-CCCCC----------------BTTEECCBCSS---C
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCe-ecCCC----------------cceEEEEecCC---C
Confidence 777766666654 2234455566777778888765 332 11111 13456777742 2
Q ss_pred HHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 318 TRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 318 ~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
...+.+.+. ..++.+..|..+.. ..++++|+|++ +++++++.+.+.|.++.
T Consensus 317 ~~~~~~~l~~~~gi~v~~g~~f~~---------------------~~~~~~Ri~~~--~~~~~i~~~~~~l~~~l 368 (370)
T 2z61_A 317 GREFAYKLLKEKFVALTPGIGFGS---------------------KGKNYIRISYA--NSYENIKEGLERIKEFL 368 (370)
T ss_dssp HHHHHHHHHHHHCEECEEGGGGCG---------------------GGSSBEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeCchhhCC---------------------CCCCEEEEEEe--CCHHHHHHHHHHHHHHH
Confidence 344555543 34566555543321 01579999999 56666777777776554
No 33
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=3.3e-32 Score=258.39 Aligned_cols=322 Identities=16% Similarity=0.169 Sum_probs=223.5
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCC-CCccccCCCCchHHHHHHHHHHHhC--CC-cEEEeccHHH-HH-HHHHHhc
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPP-QGFEYSRSNNPTRRNLERCIASLEE--AK-HGLCYSSGLG-AV-TAVTHLL 94 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~lr~~la~~~~--~~-~~i~~~~G~~-al-~~~~~~~ 94 (393)
.+.++ +.+.+++.+++.+.+++.+.+. ..+.|+....+..+++++.+++++| .+ +.+++++|++ ++ .++..++
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~ 111 (391)
T 4dq6_A 32 NDLLPMWVADMDFKAAPCIIDSLKNRLEQEIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELT 111 (391)
T ss_dssp SCSEECCSSSCSSCCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHS
T ss_pred CCceeccccCCCCCCCHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhC
Confidence 45567 7777888777777765543322 2355665555666777777777778 33 5666666655 57 6777788
Q ss_pred CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---------CHHHHHhhcCCCCcEEEEecCCCCcccccC---H
Q psy12791 95 SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---V 162 (393)
Q Consensus 95 ~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~ 162 (393)
++||+|+++.|+|++ +...++..|++++.++.+ |++++++.+++ +++|++++|+||||.+++ +
T Consensus 112 ~~gd~vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l 186 (391)
T 4dq6_A 112 KANDKIMIQEPVYSP----FNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDEL 186 (391)
T ss_dssp CTTCEEEECSSCCTH----HHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHH
T ss_pred CCCCEEEEcCCCCHH----HHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHH
Confidence 999999999999995 556677889999999875 78999999988 999999999999999976 7
Q ss_pred HHHHHHHHhCCCcEEEEeCccCcccccC----CC-CC-----cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH
Q psy12791 163 KAISAVVKQHPDILLVLDNTFLTAYYQK----SL-PW-----GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL 232 (393)
Q Consensus 163 ~~l~~l~~~~~~~~livDea~~~~~~~~----~~-~~-----~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~ 232 (393)
++|.++|+++ |+++|+||+|+.+.... ++ .. +.++++.|+||++ |++|+|+||++++++++.+.++..
T Consensus 187 ~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~~~ 264 (391)
T 4dq6_A 187 KKLGDICLKH-NVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTF-NIAGLQSSYVVLPDEKDYKLLDDA 264 (391)
T ss_dssp HHHHHHHHHT-TCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHH-TCGGGCCEEEECCSHHHHHHHHHH
T ss_pred HHHHHHHHHc-CCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhc-cCcccceEEEEeCCHHHHHHHHHH
Confidence 7888889999 99999999999865421 11 11 3449999999999 699999999999866888888776
Q ss_pred HHhcCC-CCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhh-CCCcceEeCCCCCCCcchHHHhhhcCCCcce
Q psy12791 233 QNSMGV-VPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLES-HPCVKGVLHPGLPSHPNHELAKSQWSGTSGM 306 (393)
Q Consensus 233 ~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~-~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~ 306 (393)
...++. ..++..+..+...++. +...+++..++++.+.+.|++ +|++. +..+. .+.+
T Consensus 265 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~----------------~~~~ 327 (391)
T 4dq6_A 265 FTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMPKLK-VRKPE----------------GTYL 327 (391)
T ss_dssp HHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCS----------------BSSE
T ss_pred HHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-ecCCC----------------ccEE
Confidence 554333 4555554443333321 445566677778888888876 56654 22221 1234
Q ss_pred EEEEEcCCHHHHHHHHHhcCcc-ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHH
Q psy12791 307 LSFYVNGGAEETRIFLESLLIF-RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQ 385 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~ 385 (393)
+++.++........+.+.+... ++.+..|..+.. ..++++|+|++ +++++++.+.+
T Consensus 328 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------------------~~~~~iRis~~--~~~~~i~~~l~ 384 (391)
T 4dq6_A 328 LWVDFSALGLSDEELESILVQKGKVALNQGNSFGI---------------------GGSGYQRINLA--CPRSMLEEALI 384 (391)
T ss_dssp EEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCT---------------------TCTTEEEEECC--SCHHHHHHHHH
T ss_pred EEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCC---------------------CCCCeEEEEEc--CCHHHHHHHHH
Confidence 5687752011334455555443 666665544321 12589999999 46666777766
Q ss_pred HHHHh
Q psy12791 386 ALRKA 390 (393)
Q Consensus 386 al~~~ 390 (393)
+|.++
T Consensus 385 ~l~~~ 389 (391)
T 4dq6_A 385 RIKNA 389 (391)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 34
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=2.2e-32 Score=261.03 Aligned_cols=323 Identities=16% Similarity=0.133 Sum_probs=222.1
Q ss_pred CCCCCC-CC-CCCCCccCCeeeeCCCCCCCCC--ccccCC--CCchHHHHHHHHHHHhCC---C-cEEEeccHHH-HH-H
Q psy12791 21 PDQWRS-QC-VIPPIILSTTFKQNTPGQPPQG--FEYSRS--NNPTRRNLERCIASLEEA---K-HGLCYSSGLG-AV-T 88 (393)
Q Consensus 21 ~~~~~~-~~-~~~p~~~~~~~~~~~~~~~~~~--~~y~~~--~~~~~~~lr~~la~~~~~---~-~~i~~~~G~~-al-~ 88 (393)
+.+++| ++ +.+|+.+++.+.+++.+.+... +.|... .....+++++.+++++|. + +.+++++|++ ++ .
T Consensus 38 ~~~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~ 117 (407)
T 3nra_A 38 EGRPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFL 117 (407)
T ss_dssp CSCCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHH
T ss_pred CCceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHH
Confidence 345677 54 5667778877776654432211 123321 112344455556666676 2 5677777765 47 6
Q ss_pred HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC-------C----CHHHHHhhcCCCCcEEEEecCCCCcc
Q psy12791 89 AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL-------R----KIENLIKYIKPNTKMVWIENPTNPLM 157 (393)
Q Consensus 89 ~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~-------~----d~~~l~~~l~~~~~~v~l~~p~nptG 157 (393)
++..++++||+|+++.|+|.+ +...++..|.+++.++. + |++++++.+.+++++|++++|+||||
T Consensus 118 ~~~~l~~~gd~vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG 193 (407)
T 3nra_A 118 AVAATVARGDKVAIVQPDYFA----NRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAG 193 (407)
T ss_dssp HHHTTCCTTCEEEEEESCCTH----HHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTC
T ss_pred HHHHhCCCCCEEEEcCCcccc----hHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCC
Confidence 677788999999999999985 56677888999998886 2 79999999988899999999999999
Q ss_pred cccC---HHHHHHHHHhCCCcEEEEeCccCcccccC----C------CCCcCcEEEEcccccccCCCCceEEEEEecChH
Q psy12791 158 TVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK----S------LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDS 224 (393)
Q Consensus 158 ~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~----~------~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~ 224 (393)
.++| +++|.++|+++ |+++|+||+|+.+.+.. + ...++++++.|+||++ |++|+|+||++++ ++
T Consensus 194 ~~~~~~~l~~i~~~~~~~-~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~ 270 (407)
T 3nra_A 194 VVYSAEEIGQIAALAARY-GATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTE-SLSGYRLGVAFGS-RA 270 (407)
T ss_dssp CCCCHHHHHHHHHHHHHH-TCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTT-CCGGGCCEEEEEC-HH
T ss_pred cccCHHHHHHHHHHHHHc-CCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCccccc-CCCeeeEEEEEcC-HH
Confidence 9999 89999999999 99999999999754321 1 1134679999999999 6999999999997 88
Q ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhc
Q psy12791 225 LQARLKFLQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQW 300 (393)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~ 300 (393)
+++.++.....+....++..+..+...++. +...+++..++++.+.+.|+.++++..+ .+.
T Consensus 271 ~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~-------------- 335 (407)
T 3nra_A 271 IIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFAR-TPQ-------------- 335 (407)
T ss_dssp HHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCC-CCS--------------
T ss_pred HHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceec-cCC--------------
Confidence 999888776666666666666555555532 5556777778888888888877654321 111
Q ss_pred CCCcceEEEEEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHH
Q psy12791 301 SGTSGMLSFYVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDL 379 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~ 379 (393)
.+.++++.++........+.+.|. ..++.+..|..+.. ..++++|+|++. ++++
T Consensus 336 --~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------------------~~~~~iRis~~~--~~~~ 390 (407)
T 3nra_A 336 --AGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFSP---------------------HTADSVRLNFSQ--DHEA 390 (407)
T ss_dssp --BSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTCT---------------------TCTTBEEEECCS--CHHH
T ss_pred --eeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhCC---------------------CCCCEEEEEeCC--CHHH
Confidence 135667776421122334444442 23555555544320 126899999985 5555
Q ss_pred HHHHHHHHHHh
Q psy12791 380 IADLDQALRKA 390 (393)
Q Consensus 380 i~~l~~al~~~ 390 (393)
++.+.++|.++
T Consensus 391 i~~~~~~l~~~ 401 (407)
T 3nra_A 391 AVAAARRIVTL 401 (407)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66665555543
No 35
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=8.1e-32 Score=255.00 Aligned_cols=314 Identities=17% Similarity=0.141 Sum_probs=218.3
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCc-hHHHHHHHHHHHhCCC-cEEEeccHHH-HH-HHHHHhcCCC
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNP-TRRNLERCIASLEEAK-HGLCYSSGLG-AV-TAVTHLLSAG 97 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~lr~~la~~~~~~-~~i~~~~G~~-al-~~~~~~~~~g 97 (393)
+.+| +.+.+++.+++.+.+++.+.+.... .|+++ ...++|+++|++++.+ +.+++++|++ ++ .++..++++|
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~---~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~g 102 (381)
T 1v2d_A 26 GAVNLGQGFPSNPPPPFLLEAVRRALGRQD---QYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPG 102 (381)
T ss_dssp TCEECCCCSCSSCCCHHHHHHHHHHTTTSC---SCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTT
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHHhc---CCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCC
Confidence 4567 7777777766666655544322222 34333 6789999999999976 5566666655 57 6677778999
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHH
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAIS 166 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~ 166 (393)
|+|++++|+|++ +...++..|++++.++.+ |++++++.+.+++++|++++|+||||.++| +++|.
T Consensus 103 d~Vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~ 178 (381)
T 1v2d_A 103 DEVVVLEPFFDV----YLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIA 178 (381)
T ss_dssp CEEEEEESCCTT----HHHHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEcCCCchh----HHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHH
Confidence 999999999986 455677889999988764 789999999888999999999999999998 88999
Q ss_pred HHHHhCCCcEEEEeCccCcccccC-CC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCC
Q psy12791 167 AVVKQHPDILLVLDNTFLTAYYQK-SL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVP 240 (393)
Q Consensus 167 ~l~~~~~~~~livDea~~~~~~~~-~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~ 240 (393)
++|+++ |+++|+||+|+.+.+.. +. ..++++++.|+||++ |++|+|+||++++ +++++.++..........
T Consensus 179 ~~~~~~-~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~ 255 (381)
T 1v2d_A 179 RLARAH-DLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRL-EATGYRVGWIVGP-KEFMPRLAGMRQWTSFSA 255 (381)
T ss_dssp HHHHHT-TCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHT-TCGGGCCEEEECC-TTTHHHHHHHHHHHTSSC
T ss_pred HHHHHc-CCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhc-CCcccceEEEEeC-HHHHHHHHHHHhhcccCC
Confidence 999999 99999999999765311 11 236899999999999 6899999999997 778888776555434444
Q ss_pred CHHHHHHHHhcc------CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC
Q psy12791 241 SPFDCWLVTRGL------KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG 314 (393)
Q Consensus 241 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
++..+..+...+ +.+...+++..++.+.+.+.|++. ++. +..+. .+.++++.+++.
T Consensus 256 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~~~ 317 (381)
T 1v2d_A 256 PTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLR-VYVPE----------------GTYFLMAELPGW 317 (381)
T ss_dssp CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCC-EECCS----------------BSSEEEEECTTC
T ss_pred CcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ecCCC----------------cceEEEEecChH
Confidence 554443333222 224455666777788888888763 333 22221 135678888532
Q ss_pred HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 315 AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+ +...+...++.+..|..+... ...++++|+|++. ++++++.+.+.|.++
T Consensus 318 -~----~~~~l~~~gi~v~~g~~~~~~-------------------~~~~~~iRi~~~~--~~~~i~~~~~~l~~~ 367 (381)
T 1v2d_A 318 -D----AFRLVEEARVALIPASAFYLE-------------------DPPKDLFRFAFCK--TEEELHLALERLGRV 367 (381)
T ss_dssp -C----HHHHHHHTCEECEEGGGGCSS-------------------SCCTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred -h----HHHHHHhCCEEEecchHhCCC-------------------CCCCCEEEEEeCC--CHHHHHHHHHHHHHH
Confidence 2 333333335555544332210 0125799999987 566666666666544
No 36
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=9e-32 Score=256.04 Aligned_cols=285 Identities=15% Similarity=0.124 Sum_probs=213.1
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENL 136 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l 136 (393)
.+...++++.+|++++.++++++++|++++ .++..++++||.|+++.|+|++ +...++..|.+++.++..|++++
T Consensus 87 ~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~----~~~~~~~~g~~~~~~~~~d~~~l 162 (399)
T 3tqx_A 87 QTIHKELEKDISEFLGTDDTILYSSCFDANGGLFETLLGPEDAIISDELNHAS----IIDGIRLCKAQRYRYKNNAMGDL 162 (399)
T ss_dssp BHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHH----HHHHHHSCCSEEEEECTTCTTHH
T ss_pred chHHHHHHHHHHHHHCCCcEEEECchHHHHHHHHHHhcCCCCEEEECCcccHH----HHHHHHHcCCceeEeCCCCHHHH
Confidence 456899999999999999999999999887 7777888999999999999985 56667889999999998888888
Q ss_pred HhhcCC------CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC---------CCCcCcEEEE
Q psy12791 137 IKYIKP------NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS---------LPWGVDIVLY 201 (393)
Q Consensus 137 ~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~---------~~~~~di~~~ 201 (393)
++.+.+ ++++|++++|+||||.++|+++|.++|+++ |+++|+||+|+.++.... ...+.|++++
T Consensus 163 ~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~ 241 (399)
T 3tqx_A 163 EAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKY-NALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTG 241 (399)
T ss_dssp HHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHT-TCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEE
T ss_pred HHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHc-CCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEe
Confidence 888765 799999999999999999999999999999 999999999975432211 1125689999
Q ss_pred cccccccCCCCceEEEEEecChHHHHHHHHHHH--hcCCCCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHhh
Q psy12791 202 SLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN--SMGVVPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 202 S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~ 275 (393)
|+||+++|++ +||++++ +++++.+..... .+....++..+..+...++ .....+++..++.+.+.+.|++
T Consensus 242 s~sK~~~g~~---gG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 317 (399)
T 3tqx_A 242 TLGKALGGAS---GGYTSGH-KEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEK 317 (399)
T ss_dssp ESSSSSCSSC---CEEEEEC-HHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHhcccCc---eEEEEcC-HHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 9999995454 5999997 888888876422 2344556665544444433 3455666777778888888876
Q ss_pred CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChh
Q psy12791 276 HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKE 355 (393)
Q Consensus 276 ~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~ 355 (393)
. ++. +. + ..++++++.++ +......+.+.+...++.+..+.....
T Consensus 318 ~-g~~-~~-~----------------~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~~~~~--------------- 362 (399)
T 3tqx_A 318 L-GFQ-LV-P----------------GNHPIIPVMLG-DAQLATNMADHLLQEGIYVVGFSYPVV--------------- 362 (399)
T ss_dssp H-TCC-BC-C----------------CSSSEEEEEEE-CHHHHHHHHHHHHHTTEECCEECTTTS---------------
T ss_pred c-CCC-cC-C----------------CCCCEEEEEeC-CHHHHHHHHHHHHHCCCEEeeeCCCCC---------------
Confidence 4 221 11 1 13678899885 455666677766555665543221100
Q ss_pred hHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 356 TRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 356 ~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
...++++|++++...++++++.+.++|+++.
T Consensus 363 -----~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 393 (399)
T 3tqx_A 363 -----PMGKARIRVQMSAVHTQQQLDRAIEAFGQVG 393 (399)
T ss_dssp -----CTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred -----CCCCceEEEEeecCCCHHHHHHHHHHHHHHH
Confidence 0125799999998888888888888887653
No 37
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.8e-31 Score=253.45 Aligned_cols=313 Identities=16% Similarity=0.194 Sum_probs=219.4
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh----CC---CcEEEeccHHH-HH-HHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE----EA---KHGLCYSSGLG-AV-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~----~~---~~~i~~~~G~~-al-~~~~ 91 (393)
+++| +++.+++.+++.+.+++.+.+... ...|+. ++..++|+++|+++ |. ++.+++++|++ ++ .++.
T Consensus 42 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~ 119 (389)
T 1o4s_A 42 DVINLTAGEPDFPTPEPVVEEAVRFLQKG--EVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFM 119 (389)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHTTC--CCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHH
T ss_pred CEEEccCCCCCCCCCHHHHHHHHHHHhcC--CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHH
Confidence 5667 677777766665555443322111 113333 46789999999987 64 25777777766 57 6677
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
.++++||+|++++|+|++ +...++..|.+++.++.+ |++++++.+++++++|++++|+||||.++|
T Consensus 120 ~l~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~ 195 (389)
T 1o4s_A 120 ALLDPGDEVIVFSPVWVS----YIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREF 195 (389)
T ss_dssp HHCCTTCEEEEEESCCTT----HHHHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred HhCCCCCEEEEcCCCchh----HHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHH
Confidence 778999999999999986 455667789999988764 789999999888999999999999999998
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC-C-----CC--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK-S-----LP--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ 233 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~-~-----~~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~ 233 (393)
+++|.++|+++ |+++|+||+|+.+.... + +. .++|++++|+||++ |++|+|+||++++ +++++.+....
T Consensus 196 l~~l~~~~~~~-~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~l~~~-~~~~~~l~~~~ 272 (389)
T 1o4s_A 196 LEGLVRLAKKR-NFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSH-SMTGWRVGYLISS-EKVATAVSKIQ 272 (389)
T ss_dssp HHHHHHHHHHH-TCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTT-TCGGGCCEEEECC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhc-CCcccceEEEEeC-HHHHHHHHHHh
Confidence 88999999999 99999999999865421 1 11 36789999999999 6999999999997 88888887766
Q ss_pred HhcCCCCCHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc
Q psy12791 234 NSMGVVPSPFDCWLVTRGLKT-LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN 312 (393)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
.......++..+..+...++. +...+++..++.+.+.+.|+++ ++. +..+. .+.++++.++
T Consensus 273 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~~~~~~~~~ 334 (389)
T 1o4s_A 273 SHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKM-GVK-FVEPE----------------GAFYLFFKVR 334 (389)
T ss_dssp HHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCS----------------BSSEEEEECS
T ss_pred hhcccCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc-CCe-eecCC----------------cceEEEEeCC
Confidence 554445566665555555543 4556677778888888888865 332 11111 1345777773
Q ss_pred CCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 313 GGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 313 ~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.....+.+.+. ..++.+..|..+. .++++|+|++. ++++++.+.+.|.++
T Consensus 335 ---~~~~~l~~~l~~~~gi~v~~g~~f~-----------------------~~~~~Ris~~~--~~~~l~~~l~~l~~~ 385 (389)
T 1o4s_A 335 ---GDDVKFCERLLEEKKVALVPGSAFL-----------------------KPGFVRLSFAT--SIERLTEALDRIEDF 385 (389)
T ss_dssp ---SCHHHHHHHHHHHHCEECEEGGGGT-----------------------CTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHCCEEEeCchhcC-----------------------CCCeEEEEEeC--CHHHHHHHHHHHHHH
Confidence 12234444443 3455555443321 03699999984 555666666666554
No 38
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=8e-32 Score=255.94 Aligned_cols=318 Identities=15% Similarity=0.121 Sum_probs=217.4
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHhC------CC-cEEEeccHHH-HH-HHH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLEE------AK-HGLCYSSGLG-AV-TAV 90 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~~------~~-~~i~~~~G~~-al-~~~ 90 (393)
.+++| +++.+|+.+++.+.+++.+.+.. ...|. +..+..++|+++|++++ .+ +.+++++|++ ++ .++
T Consensus 31 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~y~--~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~ 108 (391)
T 3h14_A 31 RRIIHMEVGQPGTGAPRGAVEALAKSLETDALGYT--VALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAF 108 (391)
T ss_dssp CCCEECCCSSCSSCSCHHHHHHHHHHHC------------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHH
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCC--CCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHH
Confidence 46778 88888887777666655433221 22232 22357889999999874 33 5666666655 57 777
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC--
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD-- 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~-- 161 (393)
..++++||+|+++.|+|.+ +...++..|++++.++.+ |++++++. ++++|++++|+||||.++|
T Consensus 109 ~~l~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---~~~~v~i~~p~nptG~~~~~~ 181 (391)
T 3h14_A 109 TALFDSGDRVGIGAPGYPS----YRQILRALGLVPVDLPTAPENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDHA 181 (391)
T ss_dssp HHHCCTTCEEEEEESCCHH----HHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---CCSEEEEESSCTTTCCCCCHH
T ss_pred HHhcCCCCEEEEcCCCCcc----HHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc---CCeEEEECCCCCCCCccCCHH
Confidence 7888999999999999985 556677889999999875 77888766 7899999999999999998
Q ss_pred -HHHHHHHHHhCCCcEEEEeCccCcccccC-CCC----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh
Q psy12791 162 -VKAISAVVKQHPDILLVLDNTFLTAYYQK-SLP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS 235 (393)
Q Consensus 162 -~~~l~~l~~~~~~~~livDea~~~~~~~~-~~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~ 235 (393)
+++|.++|+++ |+++|+||+|+.+.+.. +.. .+.+++++|+||++ |++|+|+||++++ +++.+.+......
T Consensus 182 ~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~~~~~~~~ 258 (391)
T 3h14_A 182 AMGALIEAAQAQ-GASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYF-SMTGWRVGWMVVP-EDQVRVVERIAQN 258 (391)
T ss_dssp HHHHHHHHHHHT-TCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTT-CCTTSCCEEEECC-GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhcc-CCccceeEEEEeC-HHHHHHHHHHHhh
Confidence 88899999999 99999999999765422 111 25679999999999 7999999999997 7888888777766
Q ss_pred cCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc
Q psy12791 236 MGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN 312 (393)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
+....++..+..+...++. +...+++..++++.+.+.|++++... +..+. .+.++++.++
T Consensus 259 ~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~----------------~~~~~~~~~~ 321 (391)
T 3h14_A 259 MFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAGFTR-IAPPD----------------GAFYVYADVS 321 (391)
T ss_dssp TTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCC-BCCCC----------------BTTEEEEECT
T ss_pred hccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcCCCc-ccCCC----------------eeEEEEEecC
Confidence 6666667666555444443 34455666677778888887653321 11111 1346777774
Q ss_pred CCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 313 GGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 313 ~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
........+.+.+. ..++.+..|..+... ..++++|+|++. ++++++.+.+.|.++
T Consensus 322 ~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~--------------------~~~~~iRis~~~--~~~~i~~~l~~l~~~ 378 (391)
T 3h14_A 322 DLTDDSRAFAAEILEKAGVAVTPGLDFDPE--------------------RGAGTLRFSYAR--ATADIEEGLDRLEAF 378 (391)
T ss_dssp TTCSCHHHHHHHHHHHHCEECEEGGGTCTT--------------------TGGGEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHCCEEEcCchhhCCC--------------------CCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 21122334444432 235666665543210 125899999998 445556555555544
No 39
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=1.2e-31 Score=255.31 Aligned_cols=316 Identities=15% Similarity=0.138 Sum_probs=216.6
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCC-CCccccCCCCchHHHHHHHHHHHh----C--CC-cEEEeccHHH-HH-HHH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPP-QGFEYSRSNNPTRRNLERCIASLE----E--AK-HGLCYSSGLG-AV-TAV 90 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~lr~~la~~~----~--~~-~~i~~~~G~~-al-~~~ 90 (393)
.+++| +.+.+++.+++.+.+++.+.+. ....| +.+ ..++|+++|+++ | .+ +.+++++|++ ++ .++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y---~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~ 106 (399)
T 1c7n_A 31 NEVVPLSVADMEFKNPPELIEGLKKYLDETVLGY---TGP-TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAV 106 (399)
T ss_dssp TTCCCCCSSSCSSCCCHHHHHHHHHHHHHCCCSS---BCC-CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHH
T ss_pred CCceeeeecCCCCCCCHHHHHHHHHHHhcCCCCC---CCC-cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHH
Confidence 56778 7788888777766665543321 12233 334 788999999975 5 33 5677777765 57 677
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--------CHHHHHhhcC-CCCcEEEEecCCCCcccccC
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--------KIENLIKYIK-PNTKMVWIENPTNPLMTVFD 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--------d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~ 161 (393)
.+++++||+|+++.|+|++ +...++..|.+++.++.+ |++++++.+. +++++|++++|+||||.++|
T Consensus 107 ~~l~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 182 (399)
T 1c7n_A 107 REFTKPGDGVIIITPVYYP----FFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWK 182 (399)
T ss_dssp HHHCCTTCEEEECSSCCTH----HHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCC
T ss_pred HHhcCCCCEEEEcCCCcHh----HHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcC
Confidence 7788899999999999995 556677889999998862 6899999987 67999999999999999999
Q ss_pred ---HHHHHHHHHhCCCcEEEEeCccCcccccC----CC---C---CcCcEEEEcccccccCCCCceEEEEEecChHHHHH
Q psy12791 162 ---VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL---P---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQAR 228 (393)
Q Consensus 162 ---~~~l~~l~~~~~~~~livDea~~~~~~~~----~~---~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~ 228 (393)
+++|.++|+++ |+++|+||+|+.+.+.. ++ . .+.++++.|+||++ |++|+|+||++++++++++.
T Consensus 183 ~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~ 260 (399)
T 1c7n_A 183 KDELQKIKDIVLKS-DLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTF-NIAGMGMSNIIIKNPDIRER 260 (399)
T ss_dssp HHHHHHHHHHHHHS-SCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHH-TCGGGCCEEEECCCHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhc-cccchheEEEEECCHHHHHH
Confidence 89999999999 99999999999865321 11 1 24569999999999 68999999999976778888
Q ss_pred HHHHHHhcCC-CCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHhh-CCCcceEeCCCCCCCcchHHHhhhcCC
Q psy12791 229 LKFLQNSMGV-VPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFLES-HPCVKGVLHPGLPSHPNHELAKSQWSG 302 (393)
Q Consensus 229 ~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~-~~~~~~v~~~~l~~~~~~~~~~~~~~~ 302 (393)
++.....++. ..++..+..+...++ .+...++...++.+.+.+.|++ +|++..+ .+.
T Consensus 261 l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~---------------- 323 (399)
T 1c7n_A 261 FTKSRDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKAP-LIE---------------- 323 (399)
T ss_dssp HHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBCC-CCS----------------
T ss_pred HHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEe-cCC----------------
Confidence 8776665532 445655544433332 2344455566777888888877 6664321 111
Q ss_pred CcceEEEEEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHH
Q psy12791 303 TSGMLSFYVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIA 381 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~ 381 (393)
.+.++++.++........+.+.+. ..++.+..|..+.. ..++++|+|++.. +++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---------------------~~~~~iRis~~~~--~~~l~ 380 (399)
T 1c7n_A 324 GTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGD---------------------GGIGFERINLAAP--SSVIQ 380 (399)
T ss_dssp BSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCG---------------------GGTTEEEEECCSC--HHHHH
T ss_pred ceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCC---------------------CCCCeEEEEeccC--HHHHH
Confidence 123457888520012334555553 44666655544321 0158999999876 33344
Q ss_pred HHHHHH
Q psy12791 382 DLDQAL 387 (393)
Q Consensus 382 ~l~~al 387 (393)
.+.+.|
T Consensus 381 ~~l~~l 386 (399)
T 1c7n_A 381 ESLERL 386 (399)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 40
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=1.2e-31 Score=254.05 Aligned_cols=319 Identities=14% Similarity=0.094 Sum_probs=227.7
Q ss_pred CCCCC-CCCCC-CCccCCeeeeCCCCCCCC---CccccCC---CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHH
Q psy12791 22 DQWRS-QCVIP-PIILSTTFKQNTPGQPPQ---GFEYSRS---NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTH 92 (393)
Q Consensus 22 ~~~~~-~~~~~-p~~~~~~~~~~~~~~~~~---~~~y~~~---~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~ 92 (393)
.+++| +++.+ ++.+++.+.+++.+.+.. .+..++| ..+...++|+++|+++|.++.+++++|++++ .++..
T Consensus 39 ~~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~~~ 118 (384)
T 1bs0_A 39 RQYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLGYSRALLFISGFAANQAVIAA 118 (384)
T ss_dssp EEEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHH
T ss_pred ceEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHH
Confidence 35677 66665 445666666554332111 1112223 3477899999999999999999999998887 77777
Q ss_pred hcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCC---CcEEEEecCCCCcccccCHHHHHHHH
Q psy12791 93 LLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPN---TKMVWIENPTNPLMTVFDVKAISAVV 169 (393)
Q Consensus 93 ~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~---~~~v~l~~p~nptG~~~~~~~l~~l~ 169 (393)
++++||.|+++.|+|+. +...++..|.+++.+|..|++++++.+++. +++|++++|+||||.++|+++|.++|
T Consensus 119 ~~~~gd~v~~~~~~~~~----~~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~ 194 (384)
T 1bs0_A 119 MMAKEDRIAADRLSHAS----LLEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVT 194 (384)
T ss_dssp HCCTTCEEEEETTCCHH----HHHHHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHH
T ss_pred hCCCCcEEEEcccccHH----HHHHHHHcCCCEEEeCCCCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHH
Confidence 88999999999999985 455667789999999988999999888653 78999999999999999999999999
Q ss_pred HhCCCcEEEEeCccCccccc---CC----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH--hcCCCC
Q psy12791 170 KQHPDILLVLDNTFLTAYYQ---KS----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN--SMGVVP 240 (393)
Q Consensus 170 ~~~~~~~livDea~~~~~~~---~~----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~ 240 (393)
+++ |+++|+||+|+.+... .+ ...+.|++++|+||++ |++| ||++++ +++++.++.... ..+...
T Consensus 195 ~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~-~~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~~ 268 (384)
T 1bs0_A 195 QQH-NGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGF-GVSG---AAVLCS-STVADYLLQFARHLIYSTSM 268 (384)
T ss_dssp HHT-TCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTT-SSCC---EEEEEC-HHHHHHHHHHCHHHHSSBCC
T ss_pred HHc-CcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchh-hccC---cEEEeC-HHHHHHHHHhchhhhcCCCC
Confidence 999 9999999999876431 11 1234789999999999 5766 999997 888888765422 223345
Q ss_pred CHHHHHHHHhccCC-----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH
Q psy12791 241 SPFDCWLVTRGLKT-----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA 315 (393)
Q Consensus 241 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (393)
++..+..+...++. ....+++..++.+.+.+.|++++ +. +. +. .+.++++.++ +.
T Consensus 269 ~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~-~~-~~----------------~~~~~~~~~~-~~ 328 (384)
T 1bs0_A 269 PPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP-FT-LA-DS----------------CSAIQPLIVG-DN 328 (384)
T ss_dssp CHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS-CE-EC-SC----------------CSSBCCEEEE-SH
T ss_pred CHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC-Cc-cc-CC----------------CCCEEEEEeC-CH
Confidence 66665544433332 23456666777888888887652 22 21 11 2567788884 44
Q ss_pred HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 316 EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 316 ~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.....+.+.+...++.+..|..+.. ...++++|++++..+++++++.+.++|+++
T Consensus 329 ~~~~~l~~~l~~~gi~v~~~~~~~~--------------------~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 329 SRALQLAEKLRQQGCWVTAIRPPTV--------------------PAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp HHHHHHHHHHHHTTEECCEECTTSS--------------------CTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCcEEEeecCCCC--------------------CCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 4556676666555666655432210 012579999999998999999999988865
No 41
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=2.4e-32 Score=260.68 Aligned_cols=318 Identities=16% Similarity=0.119 Sum_probs=220.0
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh----CCC----cEEEeccHHHH-H-HHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE----EAK----HGLCYSSGLGA-V-TAV 90 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~----~~~----~~i~~~~G~~a-l-~~~ 90 (393)
+++| +++.+++++++.+.+++.+.+... ....|++ ++..++|+++|+++ |.+ ++|++++|+++ + .++
T Consensus 48 ~~idl~~g~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~ 126 (404)
T 2o1b_A 48 PLINMAVGIPDGPTPQGIIDHFQKALTIP-ENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVP 126 (404)
T ss_dssp CCEECCCCSCSSCCCHHHHHHHHHHTTCH-HHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHH
T ss_pred CEEecCCcCCCCCCCHHHHHHHHHHHhCC-CCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHH
Confidence 4677 778888877666665554432221 1234444 46789999999998 864 57888888665 7 677
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
..++++||+|+++.|+|++ +...++..|.+++.++.+ |++++++.+.+++++|++++|+||||.++|
T Consensus 127 ~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~ 202 (404)
T 2o1b_A 127 TCVINPGDYVLLPDPGYTD----YLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEV 202 (404)
T ss_dssp HHHCCTTCEEEEEESCCSS----HHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHH
T ss_pred HHhcCCCCEEEEcCCCchh----HHHHHHHCCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHH
Confidence 7788899999999999997 455667789999888763 567777777667899999999999999997
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCccccc-CC---CCC----cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQ-KS---LPW----GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ 233 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~-~~---~~~----~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~ 233 (393)
+++|.++|+++ |+++|+||+|+.+.+. .+ ... ++++++.|+||++ |++|+|+||++++ +++++.++...
T Consensus 203 l~~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~l~~~~ 279 (404)
T 2o1b_A 203 FDEAIAKFKGT-DTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGY-NMSGFRVGFAVGN-KDMIQALKKYQ 279 (404)
T ss_dssp HHHHHHHHTTS-SCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTT-TCGGGCCEEEEEC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhc-cCchhheEeEecC-HHHHHHHHHHH
Confidence 67889999999 9999999999986532 11 111 4579999999999 6899999999997 88988887766
Q ss_pred HhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEE
Q psy12791 234 NSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSF 309 (393)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
..+....++..+..+...++. +...+++..++.+.+.+.|+++ ++. +..+. .+.++++
T Consensus 280 ~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~g~~~~~ 341 (404)
T 2o1b_A 280 THTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA-DLP-FVHAK----------------GGIYVWL 341 (404)
T ss_dssp HHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-EECCC----------------BSSEEEE
T ss_pred hhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCe-ecCCC----------------cceEEEE
Confidence 655555666665554444332 3444555667778888888775 333 22221 1335888
Q ss_pred EEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 310 YVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
.++.. .....+.+.+. ..++.+..|..+... .++++|||++. ++++++.+.+.|.
T Consensus 342 ~~~~~-~~~~~l~~~l~~~~gi~v~~g~~f~~~---------------------~~~~iRis~~~--~~e~l~~~l~~l~ 397 (404)
T 2o1b_A 342 ETPPG-YDSEQFEQFLVQEKSILVAPGKPFGEN---------------------GNRYVRISLAL--DDQKLDEAAIRLT 397 (404)
T ss_dssp ECCTT-CCHHHHHHHHHHHHCEECEESGGGCGG---------------------GTTEEEEECCS--CTTHHHHHHHHHH
T ss_pred eCCCC-CCHHHHHHHHHHHCCEEEeCchhhCcC---------------------CCCeEEEEEcC--CHHHHHHHHHHHH
Confidence 88421 12233444432 335555555443210 15899999997 4455666666665
Q ss_pred Hh
Q psy12791 389 KA 390 (393)
Q Consensus 389 ~~ 390 (393)
++
T Consensus 398 ~~ 399 (404)
T 2o1b_A 398 EL 399 (404)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 42
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=8.7e-32 Score=256.51 Aligned_cols=320 Identities=13% Similarity=0.064 Sum_probs=228.6
Q ss_pred CCCCC-CCCCCCCcc--CCeeeeCCCCCCCC------CccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHH
Q psy12791 22 DQWRS-QCVIPPIIL--STTFKQNTPGQPPQ------GFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVT 91 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~--~~~~~~~~~~~~~~------~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~ 91 (393)
.+++| +++ +|+++ ++.+.+++.+.+.. ...|.....+...++|+++|+++|.++++++++|++++ .++.
T Consensus 45 ~~~id~~~~-~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~ 123 (401)
T 1fc4_A 45 SHVINFCAN-NYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFE 123 (401)
T ss_dssp CEEEECCCS-CTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHH
T ss_pred ccEEEeecc-CcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHH
Confidence 35667 555 77763 55555544322110 11222112567899999999999999999999999987 6677
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCC------CCcEEEEecCCCCcccccCHHHH
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKP------NTKMVWIENPTNPLMTVFDVKAI 165 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l 165 (393)
.++++||.|+++.|+|+++ ...++..|++++.++..|++++++.+++ ++++|++++|+||||.++|+++|
T Consensus 124 ~~~~~gd~v~~~~~~~~~~----~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i 199 (401)
T 1fc4_A 124 TLLGAEDAIISDALNHASI----IDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGV 199 (401)
T ss_dssp HHCCTTCEEEEETTCCHHH----HHHHHTSCSEEEEECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHH
T ss_pred HHcCCCCEEEEcchhHHHH----HHHHHHcCCceEEECCCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHH
Confidence 7889999999999999753 3456788999999998889999888864 78999999999999999999999
Q ss_pred HHHHHhCCCcEEEEeCccC-ccccc--------CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH--
Q psy12791 166 SAVVKQHPDILLVLDNTFL-TAYYQ--------KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN-- 234 (393)
Q Consensus 166 ~~l~~~~~~~~livDea~~-~~~~~--------~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~-- 234 (393)
.++|+++ |+++|+||+|+ .+... ..+..+.|++++|+||+++|++| ||++++ +++++.+.....
T Consensus 200 ~~l~~~~-~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g---G~~~~~-~~~~~~l~~~~~~~ 274 (401)
T 1fc4_A 200 CDLADKY-DALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG---GYTAAR-KEVVEWLRQRSRPY 274 (401)
T ss_dssp HHHHHHT-TEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC---EEEEEC-HHHHHHHHHHCHHH
T ss_pred HHHHHHc-CCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC---EEEEcC-HHHHHHHHHhCcCc
Confidence 9999999 99999999996 44321 11223579999999999955554 999997 888888875432
Q ss_pred hcCCCCCHHHHHHHHhccCCH---HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEE
Q psy12791 235 SMGVVPSPFDCWLVTRGLKTL---PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYV 311 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
.+....++..+..+...++.+ ...+++..++.+.+.+.|+++ ++. + .+. .+.++++.+
T Consensus 275 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~----------------~~~~~~~~~ 335 (401)
T 1fc4_A 275 LFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFT-L-AGA----------------DHAIIPVML 335 (401)
T ss_dssp HHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCC-B-CCS----------------SSSEEEEEE
T ss_pred eeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCc-c-cCC----------------CCCEEEEEc
Confidence 234456666665555444333 356667778888888888865 322 1 121 367889998
Q ss_pred cCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 312 NGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 312 ~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+ +......+.+.+...++.+..|..+.. + ..++++|++++...++++++.+.++|+++.
T Consensus 336 ~-~~~~~~~l~~~l~~~gi~v~~~~~~~~---~-----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 394 (401)
T 1fc4_A 336 G-DAVVAQKFARELQKEGIYVTGFFYPVV---P-----------------KGQARIRTQMSAAHTPEQITRAVEAFTRIG 394 (401)
T ss_dssp E-CHHHHHHHHHHHHHTTEECCEECTTSS---C-----------------TTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred C-ChHHHHHHHHHHHHCCcEEeeecCCCC---C-----------------CCCceEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 5 444556666666555666655433211 0 114789999998888888888888887653
No 43
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=8.1e-32 Score=256.23 Aligned_cols=321 Identities=13% Similarity=0.087 Sum_probs=224.0
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCc-hHHHHHHHHHHHh----CC----Cc-EEEeccHHHH-H-H
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNP-TRRNLERCIASLE----EA----KH-GLCYSSGLGA-V-T 88 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~lr~~la~~~----~~----~~-~i~~~~G~~a-l-~ 88 (393)
.+++| +++.+++.+++.+.+++.+.+. ....|+++ +..++|+++|+++ |. ++ .+++++|+++ + .
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~---~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~ 106 (396)
T 3jtx_A 30 MEAVPLHIGEPKHPTPKVITDALTASLH---ELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFS 106 (396)
T ss_dssp CCCEECSCCSCCSCCCHHHHHHHHHTGG---GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHH
T ss_pred CCeEEeCCcCCCCCCCHHHHHHHHHHhh---hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHH
Confidence 46778 8888888877777766655432 23344443 4678999998876 53 35 7888888765 7 6
Q ss_pred HHHHhcCCC-----CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcc
Q psy12791 89 AVTHLLSAG-----DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLM 157 (393)
Q Consensus 89 ~~~~~~~~g-----d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG 157 (393)
++..++++| |+|+++.|+|++ +...++..|.+++.++.+ |++++++++.+++++|++++||||||
T Consensus 107 ~~~~~~~~g~~~~~d~vl~~~p~~~~----~~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~nptG 182 (396)
T 3jtx_A 107 FVQTVLNPVSDGIKPAIVSPNPFYQI----YEGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPNNPSG 182 (396)
T ss_dssp HHHHHCCC---CCCCEEEEEESCCHH----HHHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSCTTTC
T ss_pred HHHHHhCCCCccCCCEEEEcCCCcHh----HHHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCCCCCC
Confidence 677788886 799999999985 566778899999999863 67788888877899999999999999
Q ss_pred cccCHHH---HHHHHHhCCCcEEEEeCccCcccccC--CC-----------CCcCcEEEEcccccccCCCCceEEEEEec
Q psy12791 158 TVFDVKA---ISAVVKQHPDILLVLDNTFLTAYYQK--SL-----------PWGVDIVLYSLTKYMNGHSDVVMGATVTN 221 (393)
Q Consensus 158 ~~~~~~~---l~~l~~~~~~~~livDea~~~~~~~~--~~-----------~~~~di~~~S~sK~~~G~~G~r~G~~~~~ 221 (393)
.+++.++ |.++|+++ |+++|+||+|+.+.... +. ..+.++++.|+||.+ |++|+|+||++++
T Consensus 183 ~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~ 260 (396)
T 3jtx_A 183 SVLDLDGWKEVFDLQDKY-GFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRS-NVPGLRSGFVAGD 260 (396)
T ss_dssp CCCCHHHHHHHHHHHHHH-CCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTS-SCGGGCCEEEEEC
T ss_pred CcCCHHHHHHHHHHHHHc-CCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEecccccc-CCcccceEEEEeC
Confidence 9998555 88899999 99999999999865432 22 146789999999999 6999999999987
Q ss_pred ChHHHHHHHHHHHhcCCCCCHHHHHHHHhccC---CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhh
Q psy12791 222 DDSLQARLKFLQNSMGVVPSPFDCWLVTRGLK---TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKS 298 (393)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~ 298 (393)
+++.+.+.......+...++..+..+...++ .+...++++.++.+.+.+.|++... +..+.
T Consensus 261 -~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~------------ 324 (396)
T 3jtx_A 261 -AELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFD---VKLPD------------ 324 (396)
T ss_dssp -HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCS------------
T ss_pred -HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCC---ccCCC------------
Confidence 8899988877666566666666555544432 3445566666777777888875411 11111
Q ss_pred hcCCCcceEEEEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChH
Q psy12791 299 QWSGTSGMLSFYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYT 377 (393)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~ 377 (393)
.+.++++.+++ .....+.+.+ +..++.+..|..++..... .+..++++|||++. ++
T Consensus 325 ----~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~---------------~~~~~~~iRis~~~--~~ 381 (396)
T 3jtx_A 325 ----ASFYIWLKVPD--GDDLAFARNLWQKAAIQVLPGRFLARDTEQ---------------GNPGEGYVRIALVA--DV 381 (396)
T ss_dssp ----SSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCCCCTT---------------CCTTTTEEEEECCS--CH
T ss_pred ----eeEEEEEECCC--CCHHHHHHHHHHHCCEEEeCChHhCCcccc---------------cCCCCCeEEEEEcC--CH
Confidence 24578888853 1223344443 3336666666554321100 01236899999987 56
Q ss_pred HHHHHHHHHHHHh
Q psy12791 378 DLIADLDQALRKA 390 (393)
Q Consensus 378 ~~i~~l~~al~~~ 390 (393)
++++.+.+.|.++
T Consensus 382 ~~i~~~l~~l~~~ 394 (396)
T 3jtx_A 382 ATCVKAAEDIVSL 394 (396)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666666666654
No 44
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=9.5e-32 Score=253.99 Aligned_cols=312 Identities=13% Similarity=0.066 Sum_probs=218.6
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh----CC---CcEEEeccHHHH-H-HHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE----EA---KHGLCYSSGLGA-V-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~----~~---~~~i~~~~G~~a-l-~~~~ 91 (393)
+++| +++.+|+.+++.+.+++.+.+ .....|++ .+..++|+++|+++ |. ++.+++++|+++ + .++.
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~---~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~ 100 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHT---HSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPS 100 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTG---GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHH
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhh---hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHH
Confidence 7788 888899888777777665553 23344544 35688999999886 74 367777777665 7 6777
Q ss_pred HhcCC--CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHH----HHHhhcCCCCcEEEEecCCCCcccccC---H
Q psy12791 92 HLLSA--GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIE----NLIKYIKPNTKMVWIENPTNPLMTVFD---V 162 (393)
Q Consensus 92 ~~~~~--gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~----~l~~~l~~~~~~v~l~~p~nptG~~~~---~ 162 (393)
.++++ ||+|+++.|+|.+ +...++..|.+++.++.++.+ ++++.+.+++++|++++||||||.++| +
T Consensus 101 ~~~~~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l 176 (376)
T 3ezs_A 101 FVLFDYQNPTIAYPNPFYQI----YEGAAKFIKAKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSLEEL 176 (376)
T ss_dssp HHTTTCSSCEEEEEESCCTH----HHHHHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCCCCCHHHH
T ss_pred HHcCCCCCCEEEEecCCcHh----HHHHHHHcCCEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCCCCCHHHH
Confidence 88899 9999999999985 566678889999999875321 455555567899999999999999998 6
Q ss_pred HHHHHHHHhCCCcEEEEeCccCcccccC-CC------------CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHH
Q psy12791 163 KAISAVVKQHPDILLVLDNTFLTAYYQK-SL------------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 163 ~~l~~l~~~~~~~~livDea~~~~~~~~-~~------------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~ 229 (393)
++|.++|+++ |+++|+||+|..+.... +. ..++++++.|+||++ |++|+|+||++++ +++.+.+
T Consensus 177 ~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~~ 253 (376)
T 3ezs_A 177 ISWVKLALKH-DFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRS-SAPGLRSGFIAGD-SRLLEKY 253 (376)
T ss_dssp HHHHHHHHHH-TCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTT-TCGGGCCEEEEEC-HHHHHHH
T ss_pred HHHHHHHHHc-CcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhcc-CCccceeEEEeeC-HHHHHHH
Confidence 6777779999 99999999999865422 11 346779999999999 7999999999987 8899988
Q ss_pred HHHHHhcCCCCCHHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcce
Q psy12791 230 KFLQNSMGVVPSPFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGM 306 (393)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~ 306 (393)
...........++..+..+...++. +...++.+.++.+.+.+.|+ ++ ..|. .+.+
T Consensus 254 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~---~~---~~~~----------------~~~~ 311 (376)
T 3ezs_A 254 KAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK---NT---LIYP----------------YSFY 311 (376)
T ss_dssp HHHHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST---TC---CCCS----------------BSSE
T ss_pred HHHHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc---CC---CCCC----------------cceE
Confidence 8766655555666665555444432 34445555555666666554 21 1121 3567
Q ss_pred EEEEEcCCHHHHHHHHHhcCc-cccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHH
Q psy12791 307 LSFYVNGGAEETRIFLESLLI-FRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQ 385 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~l~~-~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~ 385 (393)
+++.++ + ...+.+.+.. .++.+..|..+... +..++++|||++. ++++++.+.+
T Consensus 312 ~~~~~~-~---~~~~~~~l~~~~gi~v~~g~~~~~~-------------------~~~~~~iRis~~~--~~~~i~~~l~ 366 (376)
T 3ezs_A 312 VYLPVQ-N---GENFAKTLYQNEGIITLPALYLGRN-------------------RIGADYVRLALVY--DTPLLEKPLE 366 (376)
T ss_dssp EEEECS-C---HHHHHHHHHHHHCCBCEEGGGGCST-------------------TTTTTEEEEECCS--CHHHHHHHHH
T ss_pred EEEECC-C---HHHHHHHHHHhCCEEEeCcHHhCCC-------------------CCCCCeEEEEEcC--CHHHHHHHHH
Confidence 888884 3 2334444433 45556555543210 0126899999985 6677777777
Q ss_pred HHHHhh
Q psy12791 386 ALRKAC 391 (393)
Q Consensus 386 al~~~~ 391 (393)
+|+++.
T Consensus 367 ~l~~~l 372 (376)
T 3ezs_A 367 IIETYR 372 (376)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776654
No 45
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1e-32 Score=260.72 Aligned_cols=317 Identities=13% Similarity=0.133 Sum_probs=220.2
Q ss_pred CCCCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHhC------CC-cEEEeccHHH-HH-HH
Q psy12791 21 PDQWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLEE------AK-HGLCYSSGLG-AV-TA 89 (393)
Q Consensus 21 ~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~~------~~-~~i~~~~G~~-al-~~ 89 (393)
..+++| +++.+|+.+++.+.+++.+.+.. .+.|+. .+ .++|+++|++++ .+ +.+++++|++ ++ .+
T Consensus 22 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~---~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~ 97 (377)
T 3fdb_A 22 GQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQP---DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIA 97 (377)
T ss_dssp CTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCC---SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred CCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCC---CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHH
Confidence 356778 78889988887777665443221 233443 23 678888888876 43 5666666655 57 67
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---CHHHHHhhcCCCCcEEEEecCCCCcccccC---HH
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VK 163 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~ 163 (393)
+..++++||+|+++.|+|++ +...++..|.+++.++.+ |++++++.+.++++++++++|+||||.++| ++
T Consensus 98 ~~~~~~~gd~vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~ 173 (377)
T 3fdb_A 98 IDHFTPAQSKVIVPTPAYPP----FFHLLSATQREGIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLN 173 (377)
T ss_dssp HHHHSCTTCCEEEEESCCTH----HHHHHHHHTCCEEEEECTTSCCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHH
T ss_pred HHHhcCCCCEEEEcCCCcHh----HHHHHHHcCCEEEEccCCCCCCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 77788999999999999995 556677789999999887 899999999888999999999999999997 66
Q ss_pred HHHHHHHhCCCcEEEEeCccCcccccC-----CCC----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH
Q psy12791 164 AISAVVKQHPDILLVLDNTFLTAYYQK-----SLP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN 234 (393)
Q Consensus 164 ~l~~l~~~~~~~~livDea~~~~~~~~-----~~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~ 234 (393)
+|.++|+++ |+++|+||+|+.+.... ++. .+.++++.|+||++ |++|+|+||+++.++++.+.++....
T Consensus 174 ~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~~~~~ 251 (377)
T 3fdb_A 174 ELCDLAHRY-DARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAW-NIAGLKCAQIIFSNPSDAEHWQQLSP 251 (377)
T ss_dssp HHHHHHHHT-TCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTT-TCGGGCCEEEECCSHHHHHHHHHSCH
T ss_pred HHHHHHHHc-CCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhc-cCcchhheEEEeCCHHHHHHHHHHHH
Confidence 677779999 99999999999865432 111 23459999999999 79999999999866888888876544
Q ss_pred hcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhh-CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEE
Q psy12791 235 SMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLES-HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSF 309 (393)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~-~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
......++..+..+...++. +...+++..++.+.+.+.|++ +|++. +..+. .+.++++
T Consensus 252 ~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~----------------~~~~~~~ 314 (377)
T 3fdb_A 252 VIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAK-ITPMQ----------------ATYLMWI 314 (377)
T ss_dssp HHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCE-ECCCS----------------BCSEEEE
T ss_pred hhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCC----------------eeEEEEE
Confidence 44445566655544443322 345566677788888888877 66654 22221 1234578
Q ss_pred EEcC---CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHH
Q psy12791 310 YVNG---GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQA 386 (393)
Q Consensus 310 ~~~~---~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a 386 (393)
.++. +.+..+.++++ .++.+..|..+... .++++|+|++. ++++++...++
T Consensus 315 ~~~~~~~~~~~~~~l~~~---~gi~v~~g~~~~~~---------------------~~~~~Ris~~~--~~e~i~~~l~~ 368 (377)
T 3fdb_A 315 DFRDTTIEGSPSEFFIEK---AKVAMNDGAWFGED---------------------GTGFCRLNFAT--SREVLEEAIDR 368 (377)
T ss_dssp ECTTSCCCSCHHHHHHHH---HCEECEEGGGGCGG---------------------GTTEEEEECCS--CHHHHHHHHHH
T ss_pred ECcccCCCHHHHHHHHHh---CCEEecCChhccCC---------------------CCCEEEEEeCC--CHHHHHHHHHH
Confidence 7752 11223333332 24555555443211 16899999985 55666666666
Q ss_pred HHHh
Q psy12791 387 LRKA 390 (393)
Q Consensus 387 l~~~ 390 (393)
|.++
T Consensus 369 l~~~ 372 (377)
T 3fdb_A 369 MAKA 372 (377)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 46
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-31 Score=254.87 Aligned_cols=322 Identities=19% Similarity=0.166 Sum_probs=215.9
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHhC--CC-cEEEeccHHH-HH-HHHHHhcC
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLEE--AK-HGLCYSSGLG-AV-TAVTHLLS 95 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~~--~~-~~i~~~~G~~-al-~~~~~~~~ 95 (393)
+++| +...+++.+++.+.+++.+.+.. .+.|+.......+++++.+++.+| .+ +.+++++|++ ++ .++..+++
T Consensus 28 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~ 107 (391)
T 3dzz_A 28 KELPMWIAEMDFKIAPEIMASMEEKLKVAAFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTS 107 (391)
T ss_dssp TCEECCSSCCSSCCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSC
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCC
Confidence 5677 66667777777766655433222 344544322334445555555556 33 6777777755 57 67777889
Q ss_pred CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC--------CCHHHHHhhcC-CCCcEEEEecCCCCcccccC---HH
Q psy12791 96 AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL--------RKIENLIKYIK-PNTKMVWIENPTNPLMTVFD---VK 163 (393)
Q Consensus 96 ~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~--------~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~---~~ 163 (393)
+||+|+++.|+|++ +...++..|.+++.++. .|++++++++. +++++|++++|+||||.+++ ++
T Consensus 108 ~gd~vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~ 183 (391)
T 3dzz_A 108 PGDQILVQEPVYNM----FYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVK 183 (391)
T ss_dssp TTCEEEECSSCCHH----HHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHH
T ss_pred CCCeEEECCCCcHH----HHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHH
Confidence 99999999999985 55667788999999987 37899999997 68999999999999999965 88
Q ss_pred HHHHHHHhCCCcEEEEeCccCcccccC--CCC--------CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH
Q psy12791 164 AISAVVKQHPDILLVLDNTFLTAYYQK--SLP--------WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ 233 (393)
Q Consensus 164 ~l~~l~~~~~~~~livDea~~~~~~~~--~~~--------~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~ 233 (393)
+|.++|+++ |+++|+||+|+.+.... +.. .++++++.|+||++ |++|+|+||++++++++.+.++...
T Consensus 184 ~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~~~~ 261 (391)
T 3dzz_A 184 RIAELCAKH-QVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTF-NLAALHAACAIIPNPDLRARAEESF 261 (391)
T ss_dssp HHHHHHHHT-TCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHH-TCTTTCCEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHC-CCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhc-cccchhheEEEECCHHHHHHHHHHH
Confidence 888999999 99999999999755321 111 12349999999999 6999999999997688888887664
Q ss_pred HhcC-CCCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHhh-CCCcceEeCCCCCCCcchHHHhhhcCCCcceE
Q psy12791 234 NSMG-VVPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFLES-HPCVKGVLHPGLPSHPNHELAKSQWSGTSGML 307 (393)
Q Consensus 234 ~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~-~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 307 (393)
...+ ...++..+..+...++ .+....++..++.+.+.+.|++ +|++. +..+. .+.++
T Consensus 262 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~----------------~~~~~ 324 (391)
T 3dzz_A 262 FLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFAYAREFLAKEVPEVK-VLDSN----------------ASYLA 324 (391)
T ss_dssp HHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCC----------------BSSEE
T ss_pred HhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EeccC----------------ceEEE
Confidence 4222 2333333333322222 2455666677788888898987 67654 22222 13456
Q ss_pred EEEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHH
Q psy12791 308 SFYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQA 386 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a 386 (393)
++.++........+.+.+ +..++.+..|..+... .++++|+|++ +++++++.+.+.
T Consensus 325 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---------------------~~~~iRis~~--~~~~~i~~~l~~ 381 (391)
T 3dzz_A 325 WVDISALGMNAEDFCKYLREKTGLIISAGNGYRGN---------------------GHEFVRINLA--CPKELVIDGMQR 381 (391)
T ss_dssp EEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTT---------------------GGGEEEEECC--SCHHHHHHHHHH
T ss_pred EEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCC---------------------CCCEEEEEec--CCHHHHHHHHHH
Confidence 777742111334455555 3456666666543211 1589999998 455666666666
Q ss_pred HHHh
Q psy12791 387 LRKA 390 (393)
Q Consensus 387 l~~~ 390 (393)
|.++
T Consensus 382 l~~~ 385 (391)
T 3dzz_A 382 LKQG 385 (391)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 47
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.98 E-value=1.9e-31 Score=255.24 Aligned_cols=318 Identities=17% Similarity=0.133 Sum_probs=215.5
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCC--CccccCCCCchHHHHHHHHHHHh----CC---C-cEEEeccHHH-HH-H
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQ--GFEYSRSNNPTRRNLERCIASLE----EA---K-HGLCYSSGLG-AV-T 88 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~--~~~y~~~~~~~~~~lr~~la~~~----~~---~-~~i~~~~G~~-al-~ 88 (393)
.+++| +++.+++++++.+.+++.+.+.. .+.|+ +.++..++|+++|+++ |. + +.+++++|++ ++ .
T Consensus 37 ~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~ 114 (412)
T 2x5d_A 37 EDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYS--TSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAH 114 (412)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHTC-----------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHH
T ss_pred CCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC--CCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHH
Confidence 35677 77777777666666655443322 12333 2466789999999998 74 2 4677766655 57 6
Q ss_pred HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC
Q psy12791 89 AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD 161 (393)
Q Consensus 89 ~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 161 (393)
++..++++||+|+++.|+|++ +...++..|.+++.++.+ |++++++.+.+++++|++++|+||||.++|
T Consensus 115 ~~~~~~~~gd~Vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~ 190 (412)
T 2x5d_A 115 LMLATLDHGDTILVPNPSYPI----HIYGAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVE 190 (412)
T ss_dssp HHHHHCCTTCEEEEEESCCHH----HHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCC
T ss_pred HHHHhCCCCCEEEEcCCCchh----HHHHHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCC
Confidence 677788999999999999985 555667789999988774 468888888888999999999999999998
Q ss_pred ---HHHHHHHHHhCCCcEEEEeCccCcccccC----C---CC--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHH
Q psy12791 162 ---VKAISAVVKQHPDILLVLDNTFLTAYYQK----S---LP--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 162 ---~~~l~~l~~~~~~~~livDea~~~~~~~~----~---~~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~ 229 (393)
+++|.++|+++ |+++|+||+|+.+.+.. + +. .+++++++|+||++ |++|+|+||++++ +++++.+
T Consensus 191 ~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l 267 (412)
T 2x5d_A 191 LDFFERVVALAKQY-DVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSY-NMAGWRIGFMVGN-PELVSAL 267 (412)
T ss_dssp HHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CC-SCTTSCCEEEEEC-HHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCcccc-CCcccceEEEEcC-HHHHHHH
Confidence 67899999999 99999999999865421 1 11 35789999999999 6899999999997 8888888
Q ss_pred HHHHHhcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcc
Q psy12791 230 KFLQNSMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSG 305 (393)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~ 305 (393)
...........++..+..+...++. +...+++..++.+.+.+.|+++ ++. +..+. .+.
T Consensus 268 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~g~ 329 (412)
T 2x5d_A 268 ARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA-GWM-VENPK----------------ASM 329 (412)
T ss_dssp HHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH-TCC-CCCCS----------------BSS
T ss_pred HHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ecCCC----------------eee
Confidence 7766655555666665544444432 4445666667778888888764 222 11111 134
Q ss_pred eEEEEEcCCH--HHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHH
Q psy12791 306 MLSFYVNGGA--EETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIAD 382 (393)
Q Consensus 306 ~~~~~~~~~~--~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~ 382 (393)
++++.++... .....+.+.+ +..++.+..|..+.. ..++++|||++. ++++++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~---------------------~~~~~iRis~~~--~~~~l~~ 386 (412)
T 2x5d_A 330 YVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGD---------------------YGDDHVRFALIE--NRDRLRQ 386 (412)
T ss_dssp EEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGCG---------------------GGTTEEEEECCS--CHHHHHH
T ss_pred EEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhCC---------------------CCCCeEEEEecC--CHHHHHH
Confidence 6888884211 0234455554 223566655544311 015899999997 3444554
Q ss_pred HHHHHHH
Q psy12791 383 LDQALRK 389 (393)
Q Consensus 383 l~~al~~ 389 (393)
+.+.|.+
T Consensus 387 ~l~~l~~ 393 (412)
T 2x5d_A 387 AVRGIKA 393 (412)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 48
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.98 E-value=9.5e-32 Score=255.12 Aligned_cols=318 Identities=16% Similarity=0.155 Sum_probs=216.7
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHh----CC---CcEEEeccHHH-HH-HHH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLE----EA---KHGLCYSSGLG-AV-TAV 90 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~----~~---~~~i~~~~G~~-al-~~~ 90 (393)
.+++| +++.+++.+++.+.+++.+.+.. ...|.. .++..++|+++|+++ |. ++.+++++|++ ++ .++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~ 107 (388)
T 1j32_A 30 IDVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRYGP--AAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLM 107 (388)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCC--TTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHH
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHH
Confidence 35667 77777777666555543322111 122322 245788999999987 32 36777777755 57 677
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC--
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD-- 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~-- 161 (393)
..++++||+|++++|+|++ +...++..|++++.++.+ |++++++.+++++++|++++|+||||.++|
T Consensus 108 ~~~~~~gd~vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 183 (388)
T 1j32_A 108 LAMIEPGDEVIIPAPFWVS----YPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPD 183 (388)
T ss_dssp HHHCCTTCEEEEESSCCTH----HHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHhcCCCCEEEEcCCCChh----HHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHH
Confidence 7778999999999999985 556677889999998874 689999999888999999999999999987
Q ss_pred -HHHHHHHHHhCCCcEEEEeCccCcccccC----C---CC---CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH
Q psy12791 162 -VKAISAVVKQHPDILLVLDNTFLTAYYQK----S---LP---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK 230 (393)
Q Consensus 162 -~~~l~~l~~~~~~~~livDea~~~~~~~~----~---~~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~ 230 (393)
+++|.++|+++ |+++|+||+|+.+.+.. + +. .++++++.|+||++ |++|+|+||++++ +++.+.++
T Consensus 184 ~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~ 260 (388)
T 1j32_A 184 EVRAIAQVAVEA-GLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTY-AMTGWRVGFLAGP-VPLVKAAT 260 (388)
T ss_dssp HHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTT-TCTTTCCEEEECC-HHHHHHHH
T ss_pred HHHHHHHHHHHc-CCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhcc-CCcccceEEEEeC-HHHHHHHH
Confidence 88999999999 99999999999865421 1 11 34789999999999 6999999999997 88888887
Q ss_pred HHHHhcCCCCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcce
Q psy12791 231 FLQNSMGVVPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGM 306 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~ 306 (393)
..........++..+..+...++ .+...+++..++.+.+.+.|++++++.. ..+. .+.+
T Consensus 261 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~----------------~~~~ 323 (388)
T 1j32_A 261 KIQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLEC-PKPD----------------GAFY 323 (388)
T ss_dssp HHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBC-CCCC----------------BTTE
T ss_pred HHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcc-cCCC----------------eeEE
Confidence 76655444555655544333332 2445566777788888888987665431 1111 1234
Q ss_pred EEEEEcCCHHHHHHHHHhcCc-cccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHH
Q psy12791 307 LSFYVNGGAEETRIFLESLLI-FRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQ 385 (393)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~l~~-~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~ 385 (393)
+++.++........+.+.+.. .++.+..|..+. .++++|+|++ +++++++.+.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----------------------~~~~iRis~~--~~~~~i~~~~~ 378 (388)
T 1j32_A 324 MFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFG-----------------------ADDCIRLSYA--TDLDTIKRGME 378 (388)
T ss_dssp ECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGT-----------------------CTTBEEEECC--SCHHHHHHHHH
T ss_pred EEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhC-----------------------CCCcEEEEec--CCHHHHHHHHH
Confidence 555553100122344444432 355555443221 1478999997 45666666666
Q ss_pred HHHHh
Q psy12791 386 ALRKA 390 (393)
Q Consensus 386 al~~~ 390 (393)
.|+++
T Consensus 379 ~l~~~ 383 (388)
T 1j32_A 379 RLEKF 383 (388)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 49
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.98 E-value=2.4e-32 Score=263.32 Aligned_cols=327 Identities=12% Similarity=0.079 Sum_probs=225.8
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCc-hHHHHHHHHHHHhC------C-CcEEEeccHHHH-H-HHH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNP-TRRNLERCIASLEE------A-KHGLCYSSGLGA-V-TAV 90 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~-~~~~lr~~la~~~~------~-~~~i~~~~G~~a-l-~~~ 90 (393)
.+++| +++.+|+.+++.+.+++.+.+.. ..+..|+++ +..++|+++|++++ . ++.+++++|+++ + .++
T Consensus 44 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~ 122 (437)
T 3g0t_A 44 TKFCRMEMGVPGLPAPQIGIETEIQKLRE-GVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSF 122 (437)
T ss_dssp CCCEECCCCSCCSCCCHHHHHHHHHHHHH-TGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHH
T ss_pred CCEEeccCcCCCCCCCHHHHHHHHHHHhC-CcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHH
Confidence 35678 88889988777777665443221 111334433 46899999999987 2 367777777665 7 666
Q ss_pred HHhc--CCCC--eEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhc-CCCCcEEEEecCCCCcccc
Q psy12791 91 THLL--SAGD--HIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYI-KPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 91 ~~~~--~~gd--~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l-~~~~~~v~l~~p~nptG~~ 159 (393)
..++ ++|| +|+++.|+|.+ +...++..|++++.++.+ |++++++++ ++++++|++++||||||.+
T Consensus 123 ~~l~~~~~gd~~~Vl~~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~ 198 (437)
T 3g0t_A 123 LVANRTHKNREYGTLFIDPGFNL----NKLQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQC 198 (437)
T ss_dssp HHHTTSCTTCSCCEEEEESCCHH----HHHHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCC
T ss_pred HHHhcCCCCCccEEEEeCCCcHh----HHHHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCc
Confidence 7777 8999 99999999985 566677789999998874 788999999 6789999999999999999
Q ss_pred cC---HHHHHHHHHhCCCcEEEEeCccCccccc--CCC------------CCcCcEEEEcccccccCCCCceEEEEEecC
Q psy12791 160 FD---VKAISAVVKQHPDILLVLDNTFLTAYYQ--KSL------------PWGVDIVLYSLTKYMNGHSDVVMGATVTND 222 (393)
Q Consensus 160 ~~---~~~l~~l~~~~~~~~livDea~~~~~~~--~~~------------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~ 222 (393)
++ +++|.++|+++ |+++|+||+|+.+.+. .+. ..+++++++|+||++ |++|+|+||++++
T Consensus 199 ~~~~~l~~i~~~a~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~- 275 (437)
T 3g0t_A 199 MTDEELRIIGELATKH-DVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAF-SYAGQRIGVLMIS- 275 (437)
T ss_dssp CCHHHHHHHHHHHHHT-TCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTT-SCGGGCCEEEEEC-
T ss_pred CCHHHHHHHHHHHHHC-CcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCC-CCccceeEEEEEC-
Confidence 98 66789999999 9999999999875432 111 145679999999999 6999999999998
Q ss_pred hHHHH-H-----------------HHHHHHhcCCCCCHHHHHHHHhccCC-------HHHHHHHHHHHHHHHHHHHhhCC
Q psy12791 223 DSLQA-R-----------------LKFLQNSMGVVPSPFDCWLVTRGLKT-------LPCRLKEHERGSIEVAKFLESHP 277 (393)
Q Consensus 223 ~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~~~ 277 (393)
+++++ . +...........++..+..+...++. +...++++.++.+.+.+.|+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~- 354 (437)
T 3g0t_A 276 GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN- 354 (437)
T ss_dssp HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 78877 6 65544433444555555444433321 5667777788888899999876
Q ss_pred CcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhH
Q psy12791 278 CVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETR 357 (393)
Q Consensus 278 ~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~ 357 (393)
++. +..+.-.. .....+.++++.+++ .....+.+.|...++.+..|..+..
T Consensus 355 g~~-~~~~~~~~---------~~~~~~~~~~~~~~~--~~~~~l~~~L~~~gi~v~~~~~~~~----------------- 405 (437)
T 3g0t_A 355 GFN-IVYDKDGN---------EPLADGFYFTVGYKG--MDSSKLIEKFVRYGMCAITLKTTGS----------------- 405 (437)
T ss_dssp TEE-ESSCEETT---------EECCSSSEEEEEETT--CCHHHHHHHHHHTTEECEESTTTTC-----------------
T ss_pred CCE-EeccccCC---------CCCceeEEEEEecCC--CCHHHHHHHHHHcCeEEeeccccCC-----------------
Confidence 432 21000000 000125678888852 1233444444444666555443210
Q ss_pred hhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 358 DALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 358 ~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..++++|+|++.. ++++++.+.++|+++.
T Consensus 406 ----~~~~~iRis~~~~-~~e~i~~~~~~l~~~~ 434 (437)
T 3g0t_A 406 ----KRNEAMRICTSLL-PESQFPDLEKRLQMLN 434 (437)
T ss_dssp ----CCTTCEEEECSSS-CGGGHHHHHHHHHHHH
T ss_pred ----CCCCEEEEEEecC-CHHHHHHHHHHHHHHH
Confidence 1137899999955 6666777777777654
No 50
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.98 E-value=4.2e-31 Score=251.47 Aligned_cols=317 Identities=18% Similarity=0.187 Sum_probs=237.3
Q ss_pred CCchHHHHHHHHHHHhCCCcEEE---eccHHHHH-HHHHHhcCCCCeEEEcC-CCccchHHHH-------HHhcccCCcE
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLC---YSSGLGAV-TAVTHLLSAGDHIISGD-DVYGGTYRYF-------AQVAPKIGLE 124 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~---~~~G~~al-~~~~~~~~~gd~vl~~~-~~y~~~~~~~-------~~~~~~~g~~ 124 (393)
++++..+|++.+|+++|.+.+++ ++||++|+ .++.+++++||+|++++ +.|+++...+ ...++..|++
T Consensus 71 ~~~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~ 150 (427)
T 3i16_A 71 GDIGRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGIN 150 (427)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCE
T ss_pred CHHHHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCE
Confidence 45678999999999999998888 89999998 77888999999999999 9998754333 1456778999
Q ss_pred EEeeCC-----CCHHHHHhhcC--CCCcEEEEec----CCCCcccccCHHHHHHHHHh--CCCcEEEEeCccCccc-ccC
Q psy12791 125 VDFVDL-----RKIENLIKYIK--PNTKMVWIEN----PTNPLMTVFDVKAISAVVKQ--HPDILLVLDNTFLTAY-YQK 190 (393)
Q Consensus 125 v~~~~~-----~d~~~l~~~l~--~~~~~v~l~~----p~nptG~~~~~~~l~~l~~~--~~~~~livDea~~~~~-~~~ 190 (393)
++.++. .|+++++++++ +++++|++++ |+||||.+.|+++|.++|++ + |+++++|++|+.+. ...
T Consensus 151 ~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~-g~~livD~a~~~~~~~~~ 229 (427)
T 3i16_A 151 YKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRK-DIICFVDNCYGEFMDTKE 229 (427)
T ss_dssp EEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCT-TSEEEEECTTTTTSSSSC
T ss_pred EEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCC-CCEEEEECCCccccccCC
Confidence 999998 38999999998 7899999999 99999999999999999999 9 99999999999877 456
Q ss_pred CCCCcCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHHHH--hcCCCCCH-HH-HHHHHhccCCHHHHHHHHHHH
Q psy12791 191 SLPWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFLQN--SMGVVPSP-FD-CWLVTRGLKTLPCRLKEHERG 265 (393)
Q Consensus 191 ~~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~ 265 (393)
+...++|++++|+||+++ .+| .++||++++ ++++++++.... ..+...++ .. ++++.++++.+..+++++.++
T Consensus 230 p~~~gaDiv~~S~sK~lg-g~g~~~gG~i~~~-~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~~~r~~~~~~~ 307 (427)
T 3i16_A 230 PTDVGADLIAGSLIKNIG-GGIAPTGGYLAGT-KDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLAPHISMEALKG 307 (427)
T ss_dssp GGGGTCSEEEEETTSGGG-TTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCeEEEecCcccCC-CCCCceEEEEEEC-HHHHHHHHHhcccCccCccCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666789999999999995 444 678999997 899998876432 23332333 33 677788888888899999999
Q ss_pred HHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccC--------Cc
Q psy12791 266 SIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLG--------GI 337 (393)
Q Consensus 266 ~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g--------~~ 337 (393)
+..++++|+.++. .+ +|+ ++.+.+ .-+++|.+ ++.+.+.+|++.++.+....++- |+
T Consensus 308 a~~la~~L~~~g~--~V-~p~-~~~~~~----------~~i~~i~l-~~~~~~~~f~~~l~~~~~~~s~~~p~~~~~~gy 372 (427)
T 3i16_A 308 AILCSRIMELAGF--EV-MPK-YDEKRS----------DIIQSIKF-NDKDKLIEFCKGIQTGSPIDSFVSCEPWDMPGY 372 (427)
T ss_dssp HHHHHHHHHHTTC--EE-ESC-TTSCCS----------SSCEEEEC-SSHHHHHHHHHHHHHTCSSSTTSCCCCBCC---
T ss_pred HHHHHHHHHhCCC--ee-cCC-CCCCCc----------cEEEEEEE-CCHHHHHHHHHHHhhcCcccccccCcCCCCCCC
Confidence 9999999999876 35 666 433332 23889999 68899999999998754333221 11
Q ss_pred cccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 338 ESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 338 ~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+-........-..-.-+........+.++...-|-.+-+...-.+..+++++.
T Consensus 373 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (427)
T 3i16_A 373 TDQVIMAAGAFIQGSSIELSADAPIREPYIAYLQGGLTFDHAKIGILIALSRIV 426 (427)
T ss_dssp CCCEEEEECCSSTTCSSSSEEEEESCTTCEEEEECCSSHHHHHHHHHHHHHTTC
T ss_pred CCceeeccCcCCCCccccccCCCCCCCCeEEEEcCCccHHHHHHHHHHHHHHHh
Confidence 111000000000000011111122346788888888888888888888887764
No 51
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.98 E-value=2.9e-31 Score=252.66 Aligned_cols=317 Identities=15% Similarity=0.133 Sum_probs=214.1
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCC--ccccCC-CCchHHHHHHHHHHHh----C--C-CcEEEeccHHH-HH-H
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQG--FEYSRS-NNPTRRNLERCIASLE----E--A-KHGLCYSSGLG-AV-T 88 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~--~~y~~~-~~~~~~~lr~~la~~~----~--~-~~~i~~~~G~~-al-~ 88 (393)
.+++| +++.+++.+++.+.+++.+.+... .....| +..+..++|+++++++ | . ++.|++++|++ ++ .
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~ 114 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSI 114 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHH
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHH
Confidence 35677 666555556666665543332111 002233 3456688999999886 3 3 36777777765 57 6
Q ss_pred HHHHhcCCC-CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccC
Q psy12791 89 AVTHLLSAG-DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFD 161 (393)
Q Consensus 89 ~~~~~~~~g-d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 161 (393)
++..++++| |+|+++.|+|++ +...++..|++++.++.+ |++++++++.+++++|++++||||||.++|
T Consensus 115 ~~~~l~~~g~d~vl~~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~ 190 (398)
T 3ele_A 115 CFRALTSDAYDEFITIAPYFPE----YKVFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYS 190 (398)
T ss_dssp HHHHHCCSTTCEEEEESSCCTH----HHHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCC
T ss_pred HHHHHcCCCCCEEEEeCCCchh----hHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCC
Confidence 777788999 999999999985 666778889999999875 789999999889999999999999999999
Q ss_pred ---HHHHHHHHHh------CCCcEEEEeCccCcccccC-C--C---CCcCcEEEEcccccccCCCCceEEEEEecCh---
Q psy12791 162 ---VKAISAVVKQ------HPDILLVLDNTFLTAYYQK-S--L---PWGVDIVLYSLTKYMNGHSDVVMGATVTNDD--- 223 (393)
Q Consensus 162 ---~~~l~~l~~~------~~~~~livDea~~~~~~~~-~--~---~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~--- 223 (393)
+++|.++|++ + |+++|+||+|+.+.+.. . . ..+.+++++|+||++ |++|+|+||++++++
T Consensus 191 ~~~l~~l~~~~~~~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~ 268 (398)
T 3ele_A 191 EETIKKLSDLLEKKSKEIGR-PIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSL-SLPGERIGYVLVPDEVYD 268 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-CCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTS-SCTTTCCEEEECCTTSTT
T ss_pred HHHHHHHHHHHHhhhhccCC-CeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcC-CCccceeEEEEEcchhhh
Confidence 6677788988 9 99999999999865421 1 1 135679999999999 699999999999843
Q ss_pred --HHHHHHHHHHHhc-CCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhc
Q psy12791 224 --SLQARLKFLQNSM-GVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQW 300 (393)
Q Consensus 224 --~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~ 300 (393)
.+.+.+....... ....+...+..+...++... .++.+.++++.+.+.|+++ ++. +..+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-------------- 331 (398)
T 3ele_A 269 KAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG-DINAYKENRDLLYEGLTRI-GYH-CFKPD-------------- 331 (398)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC-CHHHHHHHHHHHHHHHHHH-TCC-EECCS--------------
T ss_pred HHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHHc-CCe-ecCCC--------------
Confidence 2334443333332 23344555555555444321 3456667777888888764 222 22222
Q ss_pred CCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHH
Q psy12791 301 SGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLI 380 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i 380 (393)
.+.++++.+++. ....+.+.+...++.+..|..+. .++++|+|++ .+++++
T Consensus 332 --~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~-----------------------~~~~iRis~~--~~~e~i 382 (398)
T 3ele_A 332 --GAFYMFVKALED--DSNAFCEKAKEEDVLIVAADGFG-----------------------CPGWVRISYC--VDREMI 382 (398)
T ss_dssp --BSSEEEEECSSS--CHHHHHHHHHTTTEECEESGGGT-----------------------CTTEEEEECC--SCHHHH
T ss_pred --eeEEEEEEcCCC--CHHHHHHHHHHCCEEEeCccccC-----------------------CCCeEEEEec--CCHHHH
Confidence 133488888531 23445555555567776665431 1479999997 456666
Q ss_pred HHHHHHHHHh
Q psy12791 381 ADLDQALRKA 390 (393)
Q Consensus 381 ~~l~~al~~~ 390 (393)
+.+.++|+++
T Consensus 383 ~~~l~~l~~~ 392 (398)
T 3ele_A 383 KHSMPAFEKI 392 (398)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6665555543
No 52
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.98 E-value=1.7e-31 Score=253.53 Aligned_cols=319 Identities=18% Similarity=0.197 Sum_probs=216.5
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHh----CC---CcE-EEeccH-HHHH-HH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLE----EA---KHG-LCYSSG-LGAV-TA 89 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~----~~---~~~-i~~~~G-~~al-~~ 89 (393)
.+++| +.+.+++.+++.+.+++.+.+.. ...|+. ..+..++|+++|+++ |. ++. +++++| ++++ .+
T Consensus 26 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~ 103 (389)
T 1gd9_A 26 KDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGP--NIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMG 103 (389)
T ss_dssp SSCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCC--TTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHH
T ss_pred cCeEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC--CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHH
Confidence 35667 67777776666655544332211 122331 236789999999988 73 245 666666 4557 66
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC-
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD- 161 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~- 161 (393)
+..++++||+|++++|+|++ +...++..|++++.++.+ |++++++.+.+++++|++++|+||||.+++
T Consensus 104 ~~~~~~~gd~vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~ 179 (389)
T 1gd9_A 104 LSAFLKDGEEVLIPTPAFVS----YAPAVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTK 179 (389)
T ss_dssp HTTTCCTTCEEEEEESCCTT----HHHHHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHhCCCCCEEEEcCCCchh----HHHHHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCH
Confidence 66778899999999999996 455567789999888753 789999999888999999999999999996
Q ss_pred --HHHHHHHHHhCCCcEEEEeCccCcccccC----CC-C----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH
Q psy12791 162 --VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL-P----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK 230 (393)
Q Consensus 162 --~~~l~~l~~~~~~~~livDea~~~~~~~~----~~-~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~ 230 (393)
+++|.++|+++ |+++|+||+|+.+.... ++ . .++|+++.|+||++ |++|+|+||++++ +++++.++
T Consensus 180 ~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~ 256 (389)
T 1gd9_A 180 KDLEEIADFVVEH-DLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTF-AMTGWRLGFVAAP-SWIIERMV 256 (389)
T ss_dssp HHHHHHHHHHHHT-TCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTT-TCGGGCCEEEECC-HHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhc-CCcccceEEEEEC-HHHHHHHH
Confidence 88999999999 99999999999865421 11 1 35689999999999 6999999999997 88888887
Q ss_pred HHHHhcCCCCCHHHHHHHHhccCCH------HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCc
Q psy12791 231 FLQNSMGVVPSPFDCWLVTRGLKTL------PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTS 304 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~ 304 (393)
..........++..+..+...++.. ...+++..++.+.+.+.|+++ ++. +..+. .+
T Consensus 257 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~ 318 (389)
T 1gd9_A 257 KFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLP-TVKPK----------------GA 318 (389)
T ss_dssp HHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCC----------------BT
T ss_pred HHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc-CCe-ecCCC----------------ee
Confidence 7665544555666666555555542 334455566777778888765 332 11111 13
Q ss_pred ceEEEEEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHH
Q psy12791 305 GMLSFYVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADL 383 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l 383 (393)
.++++.++........+.+.+. ..++.+..|..+... .++++|+|++. ++++++.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---------------------~~~~iRi~~~~--~~~~i~~~ 375 (389)
T 1gd9_A 319 FYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKA---------------------GEGYVRISYAT--AYEKLEEA 375 (389)
T ss_dssp TEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGG---------------------GTTBEEEECCS--CHHHHHHH
T ss_pred eEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCC---------------------CCCeEEEEecC--CHHHHHHH
Confidence 3567777410112334555543 445555555433210 15799999986 45555555
Q ss_pred HHHHHHh
Q psy12791 384 DQALRKA 390 (393)
Q Consensus 384 ~~al~~~ 390 (393)
.+.|.++
T Consensus 376 l~~l~~~ 382 (389)
T 1gd9_A 376 MDRMERV 382 (389)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555543
No 53
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.98 E-value=4.1e-30 Score=246.90 Aligned_cols=290 Identities=16% Similarity=0.195 Sum_probs=202.4
Q ss_pred CchHHHHHHHHHHHh----CCC----------cEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccC
Q psy12791 58 NPTRRNLERCIASLE----EAK----------HGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKI 121 (393)
Q Consensus 58 ~~~~~~lr~~la~~~----~~~----------~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~ 121 (393)
..++.+||+++++++ |.+ ++|++|+|+++ + .++..++++||+|++++|+|++ +...++..
T Consensus 77 ~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~----~~~~~~~~ 152 (425)
T 2r2n_A 77 SAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSG----TLQSLHPL 152 (425)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHH----HHHHHGGG
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHH----HHHHHHHc
Confidence 356778999988875 543 48899888775 7 7777888999999999999985 66677889
Q ss_pred CcEEEeeCCC----CHHHHHhhcC------------CCCcEEEE-ecCCCCcccccCHH---HHHHHHHhCCCcEEEEeC
Q psy12791 122 GLEVDFVDLR----KIENLIKYIK------------PNTKMVWI-ENPTNPLMTVFDVK---AISAVVKQHPDILLVLDN 181 (393)
Q Consensus 122 g~~v~~~~~~----d~~~l~~~l~------------~~~~~v~l-~~p~nptG~~~~~~---~l~~l~~~~~~~~livDe 181 (393)
|++++.++.+ |++++++.+. +++++|++ ++||||||.+++.+ +|.++|+++ |++||+||
T Consensus 153 g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~-~~~li~De 231 (425)
T 2r2n_A 153 GCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKY-DFLIIEDD 231 (425)
T ss_dssp TCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEC
T ss_pred CCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHc-CCEEEEEC
Confidence 9999999874 7888988876 35888877 79999999999855 899999999 99999999
Q ss_pred ccCcccccC----CC---C-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccC
Q psy12791 182 TFLTAYYQK----SL---P-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLK 253 (393)
Q Consensus 182 a~~~~~~~~----~~---~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (393)
+|+.+.+.. ++ + .+.+++++||||++ | +|+|+||++++ +++++.+...........+...+..+...++
T Consensus 232 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~-~-~GlRiG~~~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~ 308 (425)
T 2r2n_A 232 PYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKII-S-SGLRIGFLTGP-KPLIERVILHIQVSTLHPSTFNQLMISQLLH 308 (425)
T ss_dssp TTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTT-C-STTCCEEEEEE-HHHHHHHHHHHHTTTCSSCHHHHHHHHHHHH
T ss_pred CcccccCCCCCCCCccccCCCCCEEEEccchhhc-c-CccceEEEecC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 998754321 11 1 24679999999999 7 99999999998 7888888776665555566666655544443
Q ss_pred C---------HHHHHHHHHHHHHHHHHHHhh-CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHH
Q psy12791 254 T---------LPCRLKEHERGSIEVAKFLES-HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLE 323 (393)
Q Consensus 254 ~---------~~~~~~~~~~~~~~l~~~l~~-~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
. +...++.+.++++.+.+.|++ ++++..+..|. .+.++++.+++..+..+.+.+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~ 372 (425)
T 2r2n_A 309 EWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPA----------------AGMFLWIKVKGINDVKELIEE 372 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCS----------------BSSEEEEEETTCSCCHHHHHT
T ss_pred hcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCC----------------ceEEEEEEeCCCCCHHHHHHH
Confidence 2 233344555667777788876 45543233332 246789998531111112233
Q ss_pred hcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 324 SLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 324 ~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.+...++.+..|..+.... +..++++|||++.. ++++++.+.+.|.++
T Consensus 373 ~l~~~gv~v~pg~~f~~~~------------------~~~~~~iRis~~~~-~~~~i~~~~~~l~~~ 420 (425)
T 2r2n_A 373 KAVKMGVLMLPGNAFYVDS------------------SAPSPYLRASFSSA-SPEQMDVAFQVLAQL 420 (425)
T ss_dssp HHHHTTEECEEGGGGSSST------------------TSCCCEEEEECSSC-CHHHHHHHHHHHHHH
T ss_pred HHHHCCcEEechhhhcCCC------------------CCCCCEEEEEeCCC-CHHHHHHHHHHHHHH
Confidence 3434466666665442110 01258999999853 555566666666544
No 54
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.98 E-value=2.4e-31 Score=250.71 Aligned_cols=307 Identities=13% Similarity=0.118 Sum_probs=218.7
Q ss_pred CC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHH------hCCC-cEEEeccHHHH-H-HHHHHh
Q psy12791 25 RS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASL------EEAK-HGLCYSSGLGA-V-TAVTHL 93 (393)
Q Consensus 25 ~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~------~~~~-~~i~~~~G~~a-l-~~~~~~ 93 (393)
+| +++.+|+++++.+.+++.+.+.. ......|+++...++|+++|++ ++.+ +.+++++|+++ + .++..+
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l 112 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAF 112 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHh
Confidence 67 88888888777776655433211 0112334444447999999998 4544 68888888776 7 677778
Q ss_pred cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHH
Q psy12791 94 LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISA 167 (393)
Q Consensus 94 ~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~ 167 (393)
+++||+|++++|+|++ +...++..|.+++.++.+ |++++++.+.+ ++++|++++|+||||.++|.+++.+
T Consensus 113 ~~~gd~Vl~~~~~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~ 188 (369)
T 3cq5_A 113 GGPGRTALGFQPSYSM----HPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVER 188 (369)
T ss_dssp CSTTCEEEEEESSCTH----HHHHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHH
T ss_pred cCCCCEEEEcCCChHH----HHHHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence 8999999999999985 556677889999988764 68999988877 7999999999999999999999999
Q ss_pred HHHhCCCcEEEEeCccCcccccCC-C----CCc-CcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCC
Q psy12791 168 VVKQHPDILLVLDNTFLTAYYQKS-L----PWG-VDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPS 241 (393)
Q Consensus 168 l~~~~~~~~livDea~~~~~~~~~-~----~~~-~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (393)
+++.+ ++++|+||+|+.+....+ . ..+ .++++.|+||++ |++|+|+||++++ +++++.++.....+ ..+
T Consensus 189 l~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~~~~~~~--~~~ 263 (369)
T 3cq5_A 189 IINVA-PGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAF-DFAGGRLGYFVAN-PAFIDAVMLVRLPY--HLS 263 (369)
T ss_dssp HHHHC-SSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTT-SCGGGCCEEEEEC-THHHHHHHTTSCTT--CSC
T ss_pred HHHhC-CCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhc-CCcccceEEEEeC-HHHHHHHHHcCCCC--CCC
Confidence 99999 899999999998653211 1 134 679999999999 6899999999998 77877776443333 355
Q ss_pred HHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHH
Q psy12791 242 PFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEET 318 (393)
Q Consensus 242 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
+..+..+...++. +...+++..++.+.+.+.|++. ++. +. +. .+.++++.++.+ .
T Consensus 264 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~~----------------~~~~~~~~~~~~---~ 321 (369)
T 3cq5_A 264 ALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL-GYA-VV-PS----------------ESNFVFFGDFSD---Q 321 (369)
T ss_dssp HHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH-TCE-EE-CC----------------SSSEEEEECCSS---H
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCE-EC-CC----------------CCeEEEEECCCC---H
Confidence 6555555444433 3345556667777888888753 333 22 22 256788887422 2
Q ss_pred HHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 319 RIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 319 ~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+.+.+...++.+..|+ .++++|+|++ ++++++.+.++|+++.
T Consensus 322 ~~l~~~l~~~gi~v~~~~--------------------------~~~~iRis~~---~~~~i~~~~~~l~~~~ 365 (369)
T 3cq5_A 322 HAAWQAFLDRGVLIRDVG--------------------------IAGHLRTTIG---VPEENDAFLDAAAEII 365 (369)
T ss_dssp HHHHHHHHHTTEECBCCS--------------------------CTTEEEEECC---CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEEECC--------------------------CCCeEEEEeC---CHHHHHHHHHHHHHHH
Confidence 334444444455554431 1478999998 5677888888887664
No 55
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.97 E-value=1.4e-30 Score=245.96 Aligned_cols=216 Identities=21% Similarity=0.330 Sum_probs=170.6
Q ss_pred CCchHHHHHHHHHHHhC-CC-cEEEeccH-HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-
Q psy12791 57 NNPTRRNLERCIASLEE-AK-HGLCYSSG-LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~-~~-~~i~~~~G-~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~- 131 (393)
+.++..+||+++|++++ .+ +.+++++| ++++ .++.+++++||+|+++.|+|++ +...++..|++++.++.+
T Consensus 61 ~~~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~ 136 (375)
T 3op7_A 61 WIEGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQ----LYDIPKSLGAEVDLWQIEE 136 (375)
T ss_dssp CTTCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTH----HHHHHHHTTCEEEEEEEEG
T ss_pred CCCChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchh----HHHHHHHcCCEEEEEeccc
Confidence 34667899999999873 33 55555555 5567 7777889999999999999986 455567889999988864
Q ss_pred ------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccCCCC-----CcCc
Q psy12791 132 ------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQKSLP-----WGVD 197 (393)
Q Consensus 132 ------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~~~~-----~~~d 197 (393)
|++++++++++++++|++++|+||||.++| +++|.++|+++ |+++|+||+|+.+... +.. .+.+
T Consensus 137 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~-~~~li~De~~~~~~~~-~~~~~~~~~~~~ 214 (375)
T 3op7_A 137 ENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEV-GAYILSDEVYRSFSEL-DVPSIIEVYDKG 214 (375)
T ss_dssp GGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTT-TCEEEEECCSCCCSSS-CCCCHHHHCTTE
T ss_pred cCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEEccccccccc-CCCchhhhcCCE
Confidence 899999999989999999999999999999 99999999999 9999999999986543 111 3567
Q ss_pred EEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHH----HHHHHHHHHHHHHHHH
Q psy12791 198 IVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPC----RLKEHERGSIEVAKFL 273 (393)
Q Consensus 198 i~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l 273 (393)
+++.|+||.+ |++|+|+||++++ +++.+.++..........++..+..+...++.... .++...++.+.+.+.|
T Consensus 215 i~~~s~sK~~-~~~G~r~G~v~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l 292 (375)
T 3op7_A 215 IAVNSLSKTY-SLPGIRIGWVAAN-HQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWI 292 (375)
T ss_dssp EEEEESSSSS-SCGGGCCEEEECC-HHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeEChhhc-CCcccceEEEEeC-HHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 6899999999995 89999887666655556667776666555544332 3444466777888888
Q ss_pred hhCCCcc
Q psy12791 274 ESHPCVK 280 (393)
Q Consensus 274 ~~~~~~~ 280 (393)
++++.+.
T Consensus 293 ~~~~~~~ 299 (375)
T 3op7_A 293 EEEPLVS 299 (375)
T ss_dssp HHCTTEE
T ss_pred hhCCCce
Confidence 8776654
No 56
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.97 E-value=2e-31 Score=255.79 Aligned_cols=325 Identities=17% Similarity=0.158 Sum_probs=223.5
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHhC------CC--cEEEeccHHHH-H-HHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLEE------AK--HGLCYSSGLGA-V-TAV 90 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~~------~~--~~i~~~~G~~a-l-~~~ 90 (393)
+.++ +.+.+++.+++.+.+++.+.+........|+. .+..++|+++|++++ .+ +.+++++|+++ + .++
T Consensus 29 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~ 108 (422)
T 3fvs_A 29 DVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAF 108 (422)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHH
T ss_pred CceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHH
Confidence 5667 77778887777776655443222211234443 366789999998875 32 46777777665 7 677
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----------------CHHHHHhhcCCCCcEEEEecCC
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----------------KIENLIKYIKPNTKMVWIENPT 153 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----------------d~~~l~~~l~~~~~~v~l~~p~ 153 (393)
..++++||+|+++.|+|++ +...++..|.+++.++.+ |++++++.+++++++|++++|+
T Consensus 109 ~~~~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~ 184 (422)
T 3fvs_A 109 QALVDEGDEVIIIEPFFDC----YEPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPN 184 (422)
T ss_dssp HHHCCTTCEEEEEESCCTT----HHHHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSC
T ss_pred HHHcCCCCEEEEcCCCchh----hHHHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEECCCC
Confidence 7788999999999999986 556677789999888653 7899999998889999999999
Q ss_pred CCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC----C---C--CCcCcEEEEcccccccCCCCceEEEEEec
Q psy12791 154 NPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK----S---L--PWGVDIVLYSLTKYMNGHSDVVMGATVTN 221 (393)
Q Consensus 154 nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~----~---~--~~~~di~~~S~sK~~~G~~G~r~G~~~~~ 221 (393)
||||.+++ +++|.++|+++ |+++|+||+|+.+.+.. + + ..+.++++.|+||.+ |++|+|+||++++
T Consensus 185 nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~~~ 262 (422)
T 3fvs_A 185 NPLGKVFSREELELVASLCQQH-DVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTF-SATGWKVGWVLGP 262 (422)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHH-TCGGGCCEEEECC
T ss_pred CCCCcCCCHHHHHHHHHHHHHc-CcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhcc-CCccceEEEEEeC
Confidence 99999995 88999999999 99999999999754321 1 1 125669999999999 6999999999997
Q ss_pred ChHHHHHHHHHHHhcCCCCCHHHHHHHHhcc-----------CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCC
Q psy12791 222 DDSLQARLKFLQNSMGVVPSPFDCWLVTRGL-----------KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSH 290 (393)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~ 290 (393)
+++++.+...........++..+..+...+ +.+...++++.++++.+.+.|+++ ++. +..|.
T Consensus 263 -~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~---- 335 (422)
T 3fvs_A 263 -DHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV-GLK-PIIPQ---- 335 (422)
T ss_dssp -HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT-TCE-EEBCS----
T ss_pred -HHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc-CCe-ecCCC----
Confidence 788888876665444445555544433322 234556677778888889999876 333 23333
Q ss_pred cchHHHhhhcCCCcceEEEEEcCCHHH------------HHHHHHh-cCccccccccCCccccccCcccccCCCCChhhH
Q psy12791 291 PNHELAKSQWSGTSGMLSFYVNGGAEE------------TRIFLES-LLIFRCAESLGGIESLADLPAEMTHKSIPKETR 357 (393)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~-l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~ 357 (393)
.+.++++.+...... ...+... ++..++.+..|+.+.....
T Consensus 336 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~-------------- 389 (422)
T 3fvs_A 336 ------------GSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPH-------------- 389 (422)
T ss_dssp ------------BSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHH--------------
T ss_pred ------------eeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcC--------------
Confidence 245678777420000 2233333 3334666666655432100
Q ss_pred hhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 358 DALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 358 ~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
....++++|||++. ++++++...+.|+++
T Consensus 390 --~~~~~~~iRis~~~--~~e~i~~~l~~l~~~ 418 (422)
T 3fvs_A 390 --QKHFDHYIRFCFVK--DEATLQAMDEKLRKW 418 (422)
T ss_dssp --HTTSCSEEEEECCC--CHHHHHHHHHHHHHH
T ss_pred --CCCCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 00126899999987 666666666666654
No 57
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.97 E-value=7.7e-31 Score=252.36 Aligned_cols=314 Identities=12% Similarity=0.077 Sum_probs=216.9
Q ss_pred CCCCC-CCCCC-CCccCCee--eeCCCCCCCCCccccCCCCc-hHHHHHHHHHHHh-----CCC-cE---EEeccHHH-H
Q psy12791 22 DQWRS-QCVIP-PIILSTTF--KQNTPGQPPQGFEYSRSNNP-TRRNLERCIASLE-----EAK-HG---LCYSSGLG-A 86 (393)
Q Consensus 22 ~~~~~-~~~~~-p~~~~~~~--~~~~~~~~~~~~~y~~~~~~-~~~~lr~~la~~~-----~~~-~~---i~~~~G~~-a 86 (393)
.+++| +.+.+ +++.++.+ .+++.+.+.. .....|+++ +..++|+++|+++ +.+ +. +++++|++ +
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~-~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~a 125 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTP-DEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHG 125 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCG-GGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHH
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCc-ccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHH
Confidence 45677 77777 67776666 6666555322 123345443 6889999999998 765 56 77777766 4
Q ss_pred H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhccc-CCcEEEeeCCC------CHHHHHhhcCC---CCcEEEEecCCCC
Q psy12791 87 V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPK-IGLEVDFVDLR------KIENLIKYIKP---NTKMVWIENPTNP 155 (393)
Q Consensus 87 l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~-~g~~v~~~~~~------d~~~l~~~l~~---~~~~v~l~~p~np 155 (393)
+ .++..++++||+|++++|+|++ +...++. .|++++.++.+ |++++++.+.+ ++++|++++||||
T Consensus 126 l~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~np 201 (430)
T 2x5f_A 126 LSLVGDLFVNQDDTILLPEHNWGN----YKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNP 201 (430)
T ss_dssp HHHHHHHHCCTTCEEEEESSCCTH----HHHHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTT
T ss_pred HHHHHHHHhCCCCEEEEcCCcCcc----HHHHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCC
Confidence 7 6777788999999999999995 5666777 89999998863 67888888865 7899999999999
Q ss_pred cccccC---HHHHHHHHHh-----CCCcEEEEeCccCcccccC----CC-----C-CcC---cEEEEcccccccCCCCce
Q psy12791 156 LMTVFD---VKAISAVVKQ-----HPDILLVLDNTFLTAYYQK----SL-----P-WGV---DIVLYSLTKYMNGHSDVV 214 (393)
Q Consensus 156 tG~~~~---~~~l~~l~~~-----~~~~~livDea~~~~~~~~----~~-----~-~~~---di~~~S~sK~~~G~~G~r 214 (393)
||.++| +++|.++|++ + |+++|+||+|+.+.+.. ++ . .+. +++++|+||++ |++|+|
T Consensus 202 tG~~~~~~~l~~i~~~~~~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r 279 (430)
T 2x5f_A 202 TGYTPTHKEVTTIVEAIKALANKGT-KVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEF-FAWGFR 279 (430)
T ss_dssp TCCCCCHHHHHHHHHHHHHHHHTTC-EEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHT-TCGGGC
T ss_pred CCCcCCHHHHHHHHHHHHhhhhccC-CEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCC-CCCCCC
Confidence 999999 8899999999 9 99999999999765421 21 1 345 78999999999 689999
Q ss_pred EEEEEe---cChHHHHHHHHHHHh----cCCCCCHHHHHHHHhccC-C---HHH---HHHHHHHHHHHHHHHHhhC---C
Q psy12791 215 MGATVT---NDDSLQARLKFLQNS----MGVVPSPFDCWLVTRGLK-T---LPC---RLKEHERGSIEVAKFLESH---P 277 (393)
Q Consensus 215 ~G~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~---~~~---~~~~~~~~~~~l~~~l~~~---~ 277 (393)
+||+++ + +++.+.+...... .....++..+..+...++ . ... .++++.++.+.+.+.|+++ .
T Consensus 280 iG~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 358 (430)
T 2x5f_A 280 VGFMTFGTSD-QTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHS 358 (430)
T ss_dssp CEEEEEBCCC-HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT
T ss_pred eEEEEEecCC-HHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999 6 8888888765543 344556666666555555 3 222 4455556667777777621 1
Q ss_pred CcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCc-cccccccCCccccccCcccccCCCCChhh
Q psy12791 278 CVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLI-FRCAESLGGIESLADLPAEMTHKSIPKET 356 (393)
Q Consensus 278 ~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~g~~~s~~~~~~~~~~~~~~~~~ 356 (393)
++. +..+. .+.++++.+++ .....+.+.+.. .++.+..|
T Consensus 359 g~~-~~~~~----------------~g~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g--------------------- 398 (430)
T 2x5f_A 359 HWQ-AYDFN----------------SGYFMAIKVHD--VDPEALRKHLIDKYSIGVIAL--------------------- 398 (430)
T ss_dssp TEE-ECCCC----------------BSSEEEEEESS--SCHHHHHHHHHHHHCEECEEC---------------------
T ss_pred Cce-eeCCC----------------ceEEEEeCCCC--CCHHHHHHHHHHhCCEEEecC---------------------
Confidence 222 21111 13358888852 123344444443 45544433
Q ss_pred HhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 357 RDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 357 ~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.++++|+|++.. ++++++.+.++|+++
T Consensus 399 ------~~~~iRis~~~~-~~e~i~~~~~~l~~~ 425 (430)
T 2x5f_A 399 ------NATDIRIAFSCV-EKDDIPHVFDSIAKA 425 (430)
T ss_dssp ------SSSEEEEEGGGS-CGGGHHHHHHHHHHH
T ss_pred ------CCCeEEEEEecC-CHHHHHHHHHHHHHH
Confidence 157999999953 444455555555443
No 58
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.97 E-value=2.6e-30 Score=248.10 Aligned_cols=321 Identities=13% Similarity=0.064 Sum_probs=216.3
Q ss_pred CCC-CCCCCC---CccCCeeeeCCCCCC--CCCccccCCCCc-hHHHHHHHHHHHhCCC-cEEEeccHHHH-H--HHH-H
Q psy12791 24 WRS-QCVIPP---IILSTTFKQNTPGQP--PQGFEYSRSNNP-TRRNLERCIASLEEAK-HGLCYSSGLGA-V--TAV-T 91 (393)
Q Consensus 24 ~~~-~~~~~p---~~~~~~~~~~~~~~~--~~~~~y~~~~~~-~~~~lr~~la~~~~~~-~~i~~~~G~~a-l--~~~-~ 91 (393)
.++ +.+.+| +.+++.+.+++.+.. ........|+++ +..+||+++|++++.+ ++|++|+|+++ + .++ .
T Consensus 34 ~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~ 113 (422)
T 3d6k_A 34 SLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEALGLPADLVVAQDGSSLNIMFDLISW 113 (422)
T ss_dssp CEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHH
T ss_pred eEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHH
Confidence 567 777777 777767777665442 111123345444 5889999999999987 78999999775 4 343 3
Q ss_pred HhcCC------------CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----CHHHHHhhcCC-CCcEEE-EecCC
Q psy12791 92 HLLSA------------GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----KIENLIKYIKP-NTKMVW-IENPT 153 (393)
Q Consensus 92 ~~~~~------------gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----d~~~l~~~l~~-~~~~v~-l~~p~ 153 (393)
.+..+ +|+|++++|+|++ +...++..|++++.++.+ |++++++.+.+ ++++|+ +++||
T Consensus 114 ~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~ 189 (422)
T 3d6k_A 114 SYTWGNNDSSRPWSAEEKVKWLCPVPGYDR----HFTITEHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFG 189 (422)
T ss_dssp HHHHCCTTCSSCGGGSSCCEEEEEESCCHH----HHHHHHHHTCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSC
T ss_pred HhcCcccccccccccCCCCEEEEeCCccHH----HHHHHHHcCCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCC
Confidence 44454 3479999999985 666777889999998874 78999998875 689988 68999
Q ss_pred CCcccccCHH---HHHHHHH-hCCCcEEEEeCccCc--cccc----CCC--------CCcCcEEEEcccccccCCCCceE
Q psy12791 154 NPLMTVFDVK---AISAVVK-QHPDILLVLDNTFLT--AYYQ----KSL--------PWGVDIVLYSLTKYMNGHSDVVM 215 (393)
Q Consensus 154 nptG~~~~~~---~l~~l~~-~~~~~~livDea~~~--~~~~----~~~--------~~~~di~~~S~sK~~~G~~G~r~ 215 (393)
||||.+++.+ +|.++|+ ++ |+++|+||+|.. +... .++ ..+++++++||||+. .+|+|+
T Consensus 190 NPtG~~~~~~~l~~l~~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~--~~Glri 266 (422)
T 3d6k_A 190 NPTGVTFSEQTCRELAEMSTAAP-DFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKIT--HAGSGV 266 (422)
T ss_dssp TTTCCCCCHHHHHHHHHCCCSST-TCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTS--CTTSSC
T ss_pred CCCCCCCCHHHHHHHHHHHhhcc-CCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhc--Ccccce
Confidence 9999999966 7777777 89 999999999985 2221 121 235689999999983 679999
Q ss_pred EEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC-------HHHHHHHHHHHHHHHHHHHhh----CCCcceEeC
Q psy12791 216 GATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT-------LPCRLKEHERGSIEVAKFLES----HPCVKGVLH 284 (393)
Q Consensus 216 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~----~~~~~~v~~ 284 (393)
||++++ +++++.+...........+...+..+...++. +...++.+.++.+.+.+.|.+ .+.+. +..
T Consensus 267 G~~~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~-~~~ 344 (422)
T 3d6k_A 267 SFFASS-KENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAK-WTS 344 (422)
T ss_dssp EEEECC-HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEE-ECC
T ss_pred EEEEeC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceE-EeC
Confidence 999997 88999888776665556667776666665554 122233344556666666653 12221 222
Q ss_pred CCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCc-cccccCcccccCCCCChhhHhhcCCC
Q psy12791 285 PGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGI-ESLADLPAEMTHKSIPKETRDALGIT 363 (393)
Q Consensus 285 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~-~s~~~~~~~~~~~~~~~~~~~~~g~~ 363 (393)
|. .+.++|+.+++. ..+.+.+.+...++.+..|+. +..... ..
T Consensus 345 p~----------------~g~~~~~~~~~~--~~~~~~~~l~~~gV~v~~~g~~f~~~~~------------------~~ 388 (422)
T 3d6k_A 345 PT----------------GGYFISVDVVPG--TASRVVELAKEAGIALTGAGSSFPLHND------------------PN 388 (422)
T ss_dssp CS----------------BSSCEEEEESTT--CHHHHHHHHHHTTEECCCTTTTSGGGCC------------------TT
T ss_pred CC----------------cceEEEEECCCC--CHHHHHHHHHHCCeEEEcCccccCCCCC------------------CC
Confidence 32 245789999532 233444555555677766432 211000 12
Q ss_pred CCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 364 DNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 364 ~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
++++|||++. .++++++.+.++|+++
T Consensus 389 ~~~iRis~~~-~~~e~i~~~~~~l~~~ 414 (422)
T 3d6k_A 389 NENIRLAPSL-PPVAELEVAMDGFATC 414 (422)
T ss_dssp SCEEEECCSS-SCHHHHHHHHHHHHHH
T ss_pred CCeEEEecCC-CCHHHHHHHHHHHHHH
Confidence 5899999997 5666666666665543
No 59
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.97 E-value=3.8e-30 Score=244.90 Aligned_cols=317 Identities=17% Similarity=0.186 Sum_probs=235.1
Q ss_pred CCchHHHHHHHHHHHhCCCcEEE---eccHHHHH-HHHHHhcCCCCeEEEcC-CCccchHHHH-------HHhcccCCcE
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLC---YSSGLGAV-TAVTHLLSAGDHIISGD-DVYGGTYRYF-------AQVAPKIGLE 124 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~---~~~G~~al-~~~~~~~~~gd~vl~~~-~~y~~~~~~~-------~~~~~~~g~~ 124 (393)
++++..+|++.+|+++|.+++++ ++||++|+ .++.+++++||+|++++ +.|+++...+ ...++..|++
T Consensus 72 ~~~g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~ 151 (427)
T 3hvy_A 72 NDIGRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVK 151 (427)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCE
T ss_pred CchhHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCE
Confidence 34678999999999999998888 89999998 77888999999999999 9998754333 1456678999
Q ss_pred EEeeCC----CCHHHHHhhcC--CCCcEEEEec----CCCCcccccCHHHHHHHHHh--CCCcEEEEeCccCccc-ccCC
Q psy12791 125 VDFVDL----RKIENLIKYIK--PNTKMVWIEN----PTNPLMTVFDVKAISAVVKQ--HPDILLVLDNTFLTAY-YQKS 191 (393)
Q Consensus 125 v~~~~~----~d~~~l~~~l~--~~~~~v~l~~----p~nptG~~~~~~~l~~l~~~--~~~~~livDea~~~~~-~~~~ 191 (393)
++.++. .|+++++++++ +++|+|++++ |+||||.+.|+++|.++|++ + |+++++|++|+.+. ...+
T Consensus 152 ~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~-g~~livD~a~~~~~~~~~p 230 (427)
T 3hvy_A 152 YKMVDLKDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNE-NVIVFVDNCYGEFVEEKEP 230 (427)
T ss_dssp EEECCCBTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCS-SSEEEEECTTCTTTSSSCG
T ss_pred EEEecCCCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCC-CCEEEEECCccccccCCCC
Confidence 999998 58999999998 7899999999 99999999999999999999 8 99999999999887 4566
Q ss_pred CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH--hcCC--CCCHHHHHHHHhccCCHHHHHHHHHHHHH
Q psy12791 192 LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN--SMGV--VPSPFDCWLVTRGLKTLPCRLKEHERGSI 267 (393)
Q Consensus 192 ~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (393)
...++|++++|+||+++|....++||++++ ++++++++.... ..+. .++...++++.++++.+..+++++.+++.
T Consensus 231 ~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~~~r~~~~~~~a~ 309 (427)
T 3hvy_A 231 TDVGADIIAGSLIKNIGGGIATTGGYIAGK-EEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMAPHVTIEAVKGAV 309 (427)
T ss_dssp GGGTCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCeEEEECCcccccccccceEEEEEEC-HHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHHHHHHHHHHHHHH
Confidence 777899999999999954322568999997 899998876542 2221 12233367777888888889999999999
Q ss_pred HHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcccccccc--------CCccc
Q psy12791 268 EVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESL--------GGIES 339 (393)
Q Consensus 268 ~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------g~~~s 339 (393)
.++++|+.++. .+ +|+ ++.+.+ ..+++|.+ ++.+.+.+|++.++.+....++ .|+.+
T Consensus 310 ~la~~L~~~g~--~V-~p~-~~~~~~----------~li~~~~l-~~~~~~~~f~~~l~~~~~~~s~~~p~~~~~~Gy~~ 374 (427)
T 3hvy_A 310 FCARIMELAGF--DV-LPK-YNDKRT----------DIIQAIKF-NDEKKLIDFIKGIQTASPVDSFVQCEAWDMPGYED 374 (427)
T ss_dssp HHHHHHHHTTC--EE-ESC-TTSCCS----------SSEEEEEC-SSHHHHHHHHHHHHHTCSSSTTCCC----------
T ss_pred HHHHHHHhCCC--ee-cCC-CCCCCc----------eEEEEEeC-CCHHHHHHHHHHhccccccccccCCCCCCCCCCcC
Confidence 99999998875 34 565 333322 23889999 6889999999999765432222 22222
Q ss_pred cccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 340 LADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.........=..-.-+........+.++...-|-.+-+...-.+..+++++
T Consensus 375 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (427)
T 3hvy_A 375 KVIMAAGTFVQGASIELSADAPIREPYIGYLQGGLTFDHAKLGVLIALSKL 425 (427)
T ss_dssp CEEEECCCSSTTCSSSSEEEEESCTTCEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred ceeeeccccCCCccccccCCCCCCCCeeEEEcCCccHHHHHHHHHHHHHHh
Confidence 211110000000011111112234678888888888888888888888765
No 60
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.97 E-value=6.7e-30 Score=242.47 Aligned_cols=318 Identities=19% Similarity=0.206 Sum_probs=232.8
Q ss_pred CCCchHHHHHHHHHHHhCCCcEEE---eccHHHHH-HHHHHhcCCCCeEEEcC-CCccchHHHHH------HhcccCCcE
Q psy12791 56 SNNPTRRNLERCIASLEEAKHGLC---YSSGLGAV-TAVTHLLSAGDHIISGD-DVYGGTYRYFA------QVAPKIGLE 124 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~~~i~---~~~G~~al-~~~~~~~~~gd~vl~~~-~~y~~~~~~~~------~~~~~~g~~ 124 (393)
|++++..+|++.+|+++|.+++++ ++||++|+ .++.+++++||+|++++ +.|.++..... ..++..|++
T Consensus 56 y~~~~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~ 135 (409)
T 3jzl_A 56 YDDEGRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIG 135 (409)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCE
T ss_pred CChhHHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCE
Confidence 345778999999999999998888 78999998 77888899999999998 99987443221 456778999
Q ss_pred EEeeCC-----CCHHHHHhhcCCCCcEEEEec----CCCCcccccCHHHHHHHHHh--CCCcEEEEeCccCccc-ccCCC
Q psy12791 125 VDFVDL-----RKIENLIKYIKPNTKMVWIEN----PTNPLMTVFDVKAISAVVKQ--HPDILLVLDNTFLTAY-YQKSL 192 (393)
Q Consensus 125 v~~~~~-----~d~~~l~~~l~~~~~~v~l~~----p~nptG~~~~~~~l~~l~~~--~~~~~livDea~~~~~-~~~~~ 192 (393)
++.++. .|++++++++++++++|++++ |+||||.+.|+++|.++|++ + |+++++|++|+.+. ...+.
T Consensus 136 ~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~-~~~livD~a~~~~~~~~~p~ 214 (409)
T 3jzl_A 136 YSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINP-EVIVFVDNCYGEFVEYQEPP 214 (409)
T ss_dssp EEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCT-TCEEEEECTTCTTTSSCCSG
T ss_pred EEEeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCC-CCEEEEeCCcccccccCCcc
Confidence 999998 489999999999999999999 99999999999999999999 9 99999999999876 34566
Q ss_pred CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh--cC--CCCCHHHHHHHHhccCCHHHHHHHHHHHHHH
Q psy12791 193 PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS--MG--VVPSPFDCWLVTRGLKTLPCRLKEHERGSIE 268 (393)
Q Consensus 193 ~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (393)
..++|++++|+||+++|....++||++++ ++++++++..... .+ .......+..+.++++.+..+++++.+++..
T Consensus 215 ~~g~Div~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~~~~r~~~~~~~a~~ 293 (409)
T 3jzl_A 215 EVGADIIAGSLIKNPGGGLAKTGGYIAGK-EALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARF 293 (409)
T ss_dssp GGTCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEECccccCCccCCceEEEEEeC-HHHHHHHHHHhccccccccccccHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 67899999999999954333568999997 8999988764422 11 1122222345667777788899999999999
Q ss_pred HHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcccccccc--------CCcccc
Q psy12791 269 VAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESL--------GGIESL 340 (393)
Q Consensus 269 l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--------g~~~s~ 340 (393)
++++|+.++. .+ +|+ ++.+.+ .-++.|.+ ++.+.+.+|++.|+......++ .|+++.
T Consensus 294 la~~L~~~g~--~v-~p~-~~~~~~----------~~i~~i~l-~~~~~~~~~~~~L~~~~~~~s~~~p~~~~~~gy~~~ 358 (409)
T 3jzl_A 294 TAAMLAEFGV--EA-DPV-WDAPRT----------DLIQSVSF-HNKEKMVAFAQAIQAASPVNAHVLPIGAYMPGYEDD 358 (409)
T ss_dssp HHHHHHHTTC--EE-ESC-TTSCCS----------SSCCEEEC-SCHHHHHHHHHHHHHTSSSSTTSCCCCBCCTTCSSC
T ss_pred HHHHHHhCCC--cc-cCC-CCCCCc----------cEEEEEEe-CCHHHHHHHHHHHHhcCcccccCCCCCCCCCCCCCc
Confidence 9999998865 34 565 333222 23788999 5889999999999865432222 111111
Q ss_pred ccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 341 ADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
........=..-.-+........+.++...-|-.+-+...-.+..+++++
T Consensus 359 ~~~~~~~f~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (409)
T 3jzl_A 359 VIMAAGTFIQGASLELTADGPIREPYQLYVQGGLTYEHIKIAVTRAIQKI 408 (409)
T ss_dssp EEEECCCSSTTCSSSCEEEEESSTTTEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred eeEeccccCCCcceeecCCCCCCCCeEEEEcCCccHHHHHHHHHHHHHhh
Confidence 10000000000001111112234678888888888888878888887765
No 61
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.97 E-value=7.9e-31 Score=250.57 Aligned_cols=324 Identities=16% Similarity=0.144 Sum_probs=221.2
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHhC------C-C-cEEEeccHHHH-H-HH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLEE------A-K-HGLCYSSGLGA-V-TA 89 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~~------~-~-~~i~~~~G~~a-l-~~ 89 (393)
.+.++ +.+.+++.+++.+.+++.+.+.. ..+..|+. .+..++|+++|++++ . + +.+++++|+++ + .+
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 101 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFI-DNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNS 101 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTC-GGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhC-ccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHH
Confidence 35666 67777777777776655443222 12334544 357889999999876 3 2 57777777665 7 67
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----------------CHHHHHhhcCCCCcEEEEecCC
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----------------KIENLIKYIKPNTKMVWIENPT 153 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----------------d~~~l~~~l~~~~~~v~l~~p~ 153 (393)
+..++++||+|+++.|+|++ +...++..|.+++.++.+ |++++++.+.+++++|++++|+
T Consensus 102 ~~~~~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~ 177 (410)
T 3e2y_A 102 IQGLVDPGDEVIIMVPFYDC----YEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPH 177 (410)
T ss_dssp HHHHCCTTCEEEEEESCCTT----HHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEEESSC
T ss_pred HHHhcCCCCEEEEeCCCchh----hHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEEeCCC
Confidence 77788999999999999986 556677789999888764 7899999998889999999999
Q ss_pred CCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC----C---C--CCcCcEEEEcccccccCCCCceEEEEEec
Q psy12791 154 NPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK----S---L--PWGVDIVLYSLTKYMNGHSDVVMGATVTN 221 (393)
Q Consensus 154 nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~----~---~--~~~~di~~~S~sK~~~G~~G~r~G~~~~~ 221 (393)
||||.+++ +++|.++|+++ |+++|+||+|+.+.+.. + . ..+.++++.|+||.+ |++|+|+||++++
T Consensus 178 nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~~~ 255 (410)
T 3e2y_A 178 NPLGKVYTRQELQVIADLCVKH-DTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTF-SVTGWKLGWSIGP 255 (410)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHS-SCGGGCCEEEECC
T ss_pred CCCCcCcCHHHHHHHHHHHHHc-CcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhc-CCCCceEEEEEEC
Confidence 99999985 88899999999 99999999998754321 1 1 124569999999999 6999999999997
Q ss_pred ChHHHHHHHHHHHhcCCCCCHHHHHHHHhcc-----------CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCC
Q psy12791 222 DDSLQARLKFLQNSMGVVPSPFDCWLVTRGL-----------KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSH 290 (393)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~ 290 (393)
+++++.++..........++..+..+...+ +.+...++++.++++.+.+.|+++ ++. +..|.
T Consensus 256 -~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~---- 328 (410)
T 3e2y_A 256 -AHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV-GLK-PIVPD---- 328 (410)
T ss_dssp -HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT-TCE-EEBCS----
T ss_pred -HHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCC----
Confidence 888888876665444445555554433322 224556667778888889999876 333 22332
Q ss_pred cchHHHhhhcCCCcceEEEEEcC--C---H-----HHHHHHHHh-cCccccccccCCccccccCcccccCCCCChhhHhh
Q psy12791 291 PNHELAKSQWSGTSGMLSFYVNG--G---A-----EETRIFLES-LLIFRCAESLGGIESLADLPAEMTHKSIPKETRDA 359 (393)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~--~---~-----~~~~~~~~~-l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~ 359 (393)
.+.++++.+.. . . .....+... ++..++.+..|+.+..... ..
T Consensus 329 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~----------~~---- 382 (410)
T 3e2y_A 329 ------------GGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKS----------KP---- 382 (410)
T ss_dssp ------------BSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTT----------HH----
T ss_pred ------------ccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCC----------CC----
Confidence 24567777642 0 0 001122222 2333566666654421100 00
Q ss_pred cCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 360 LGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 360 ~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
..++++|||++. ++++++.+.+.|++
T Consensus 383 --~~~~~iRis~~~--~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 383 --HFEKLVRFCFIK--KDSTLDAAEEIFRA 408 (410)
T ss_dssp --HHTTEEEEECCC--CHHHHHHHHHHHHT
T ss_pred --CCCCEEEEEEcC--CHHHHHHHHHHHHh
Confidence 015899999887 66666666666654
No 62
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.97 E-value=3.3e-30 Score=249.00 Aligned_cols=284 Identities=18% Similarity=0.160 Sum_probs=199.8
Q ss_pred chHHHHHHHHHHHh----CC--CcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 59 PTRRNLERCIASLE----EA--KHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 59 ~~~~~lr~~la~~~----~~--~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
.+..+||+++|+++ |. ++.|++++|+++ + .++..++++||+|+++.|+|.+ +...++..|++++.++.
T Consensus 118 ~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~ 193 (448)
T 3aow_A 118 KGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLA----ALQAFNFYEPQYIQIPL 193 (448)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHH----HHHHHHTTCCEEEEEEE
T ss_pred CCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHH----HHHHHHHcCCEEEEecc
Confidence 56889999999998 87 467888888765 7 6777788999999999999985 56667788999999887
Q ss_pred C----CHHHHHhhcC----C--CCcEEE-EecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC----CC
Q psy12791 131 R----KIENLIKYIK----P--NTKMVW-IENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL 192 (393)
Q Consensus 131 ~----d~~~l~~~l~----~--~~~~v~-l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~----~~ 192 (393)
+ |++++++.++ + ++++|+ +++|+||||.+++ +++|.++|+++ |++||+||+|..+.+.. ++
T Consensus 194 ~~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~-~~~lI~De~y~~~~~~g~~~~~~ 272 (448)
T 3aow_A 194 DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEY-DFIVVEDDPYGELRYSGNPEKKI 272 (448)
T ss_dssp ETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECSCTTCBCSSCCCCCT
T ss_pred CCCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHc-CCEEEEECCCccccCCCCCCcCH
Confidence 4 7899998886 5 789985 5899999999998 56899999999 99999999999865421 11
Q ss_pred -C---CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC------HHHHHHHH
Q psy12791 193 -P---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT------LPCRLKEH 262 (393)
Q Consensus 193 -~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 262 (393)
. .+.++++.||||++ | +|+|+||++++ +++++.+...........++..+..+...++. +...++.+
T Consensus 273 ~~~~~~~~vi~~~S~SK~~-~-~GlriG~v~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~ 349 (448)
T 3aow_A 273 KALDNEGRVIYLGTFSKIL-A-PGFRIGWMVGD-PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFY 349 (448)
T ss_dssp GGGCTTSCEEEEEESTTTT-C-GGGCCEEEEEC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEEccchhhc-c-ccccEEEEEeC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 1 24679999999999 6 99999999998 88988887665543334456655555444432 33344555
Q ss_pred HHHHHHHHHHHhh-CC-CcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCcccc
Q psy12791 263 ERGSIEVAKFLES-HP-CVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESL 340 (393)
Q Consensus 263 ~~~~~~l~~~l~~-~~-~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~ 340 (393)
.++++.+.+.|++ +| ++. +..|. .+.++|+.++.. .....+.+.+...++.+..|..+..
T Consensus 350 ~~~~~~l~~~L~~~~~~g~~-~~~p~----------------~g~~~~v~~~~~-~~~~~l~~~l~~~gV~v~pg~~f~~ 411 (448)
T 3aow_A 350 KPRRDAMLEALEEFMPEGVK-WTKPE----------------GGMFIWVTLPDG-IDSKKMLERAIKKGVAYVPGEAFYA 411 (448)
T ss_dssp HHHHHHHHHHHHHHCCTTCE-ECCCS----------------BSSEEEEECSTT-CCHHHHHHHHHHTTEECEEGGGGST
T ss_pred HHHHHHHHHHHHHhCCCCeE-EeCCC----------------ccEEEEEEcCCC-CCHHHHHHHHHHCCcEEEcchhhcC
Confidence 5677778888875 45 343 22232 245789988521 1233455554444666666544321
Q ss_pred ccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 341 ADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
. +..++++|||++.. ++++++...+.|.
T Consensus 412 ~-------------------~~~~~~iRls~~~~-~~e~i~~~~~~L~ 439 (448)
T 3aow_A 412 H-------------------RDVKNTMRLNFTYV-DEDKIMEGIKRLA 439 (448)
T ss_dssp T-------------------CCCCSEEEEECSSS-CTHHHHHHHHHHH
T ss_pred C-------------------CCCCCEEEEEeCCC-CHHHHHHHHHHHH
Confidence 1 01258999999875 3333444444443
No 63
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.97 E-value=4.3e-31 Score=250.46 Aligned_cols=318 Identities=16% Similarity=0.176 Sum_probs=212.9
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHh----CC---Cc-EEEeccHHH-HH-HHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLE----EA---KH-GLCYSSGLG-AV-TAV 90 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~----~~---~~-~i~~~~G~~-al-~~~ 90 (393)
+.+| +.+.+++.+++.+.+++.+.+.. ...|+. ..+..++|+++|+++ |. ++ .+++++|++ ++ .++
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~ 108 (386)
T 1u08_A 31 QAINLSQGFPDFDGPRYLQERLAHHVAQGANQYAP--MTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAI 108 (386)
T ss_dssp TCEECCCSSCSSCCCHHHHHHHHHHHHTTCCSCCC--TTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHH
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCC--CCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHH
Confidence 4566 66666766666665554332211 223332 235788999999985 53 25 677777765 47 667
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccC---
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFD--- 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~--- 161 (393)
..++++||+|++++|+|++ +...++..|.+++.++.+ |++++++.+.+++++|++++|+||||.++|
T Consensus 109 ~~~~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~ 184 (386)
T 1u08_A 109 TALVRNGDEVICFDPSYDS----YAPAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQAD 184 (386)
T ss_dssp HHHCCTTCEEEEEESCCTT----HHHHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred HHhCCCCCEEEEeCCCchh----HHHHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHH
Confidence 7778999999999999996 455677889999988763 789999999888999999999999999997
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC----CC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL 232 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~----~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~ 232 (393)
+++|.++|+++ |+++|+||+|+.+.+.. ++ ..++++++.|+||++ |++|+|+||++++ +++++.++..
T Consensus 185 l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~~~ 261 (386)
T 1u08_A 185 FAALWQAIAGH-EIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTY-HMTGWKVGYCVAP-APISAEIRKV 261 (386)
T ss_dssp HHHHHHHHTTS-CCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHT-TCGGGCCEEEECC-HHHHHHHHHH
T ss_pred HHHHHHHHHHc-CcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhc-CCcccceEEEEcC-HHHHHHHHHH
Confidence 68899999999 99999999999754321 11 135789999999999 6899999999997 8888888766
Q ss_pred HHhcCCCCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEE
Q psy12791 233 QNSMGVVPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLS 308 (393)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 308 (393)
........+...+..+...++ .+...+++..++.+.+.+.|+++ ++. +..+. .+.+++
T Consensus 262 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~g~~~~ 323 (386)
T 1u08_A 262 HQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNES-RLE-ILPCE----------------GTYFLL 323 (386)
T ss_dssp HHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSS-SCE-ECCCC----------------BSSEEE
T ss_pred HHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCC----------------ceEEEE
Confidence 554334444544443333332 13344555666777777777654 332 21121 145788
Q ss_pred EEEcCCH-HHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHH
Q psy12791 309 FYVNGGA-EETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQA 386 (393)
Q Consensus 309 ~~~~~~~-~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a 386 (393)
+.+++.. .....+.+.+. ..++.+..|..+... + ..++++|+|++. ++++++.+.+.
T Consensus 324 ~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~--~-----------------~~~~~iRis~~~--~~~~i~~~~~~ 382 (386)
T 1u08_A 324 VDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCAD--P-----------------FPHKLIRLCFAK--KESTLLAAAER 382 (386)
T ss_dssp EECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSS--C-----------------CCSCEEEEECCS--CHHHHHHHHHH
T ss_pred EecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCC--C-----------------CCCCEEEEEEcC--CHHHHHHHHHH
Confidence 8885210 12334444332 335555554432210 0 125799999984 56656665555
Q ss_pred HH
Q psy12791 387 LR 388 (393)
Q Consensus 387 l~ 388 (393)
|+
T Consensus 383 l~ 384 (386)
T 1u08_A 383 LR 384 (386)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 64
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.97 E-value=7.5e-31 Score=250.56 Aligned_cols=319 Identities=16% Similarity=0.144 Sum_probs=212.2
Q ss_pred CCCCC-CCCCC---CCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh------CCC-cEEEeccHHH-HH-
Q psy12791 22 DQWRS-QCVIP---PIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE------EAK-HGLCYSSGLG-AV- 87 (393)
Q Consensus 22 ~~~~~-~~~~~---p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~------~~~-~~i~~~~G~~-al- 87 (393)
.+.+| +.+.+ ++.+++.+.+++.+.+... ...|+. .+..++|+++|+++ +.+ +.+++++|++ ++
T Consensus 38 ~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~ 115 (406)
T 1xi9_A 38 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEG--HNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQ 115 (406)
T ss_dssp CCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTT--CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred CCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcC--CCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHH
Confidence 35566 55555 5555555554432221111 112333 45688999999987 333 5677777755 57
Q ss_pred HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCccccc
Q psy12791 88 TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 88 ~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 160 (393)
.++..++++||+|++++|+|++ +...++..|++++.++.+ |++++++.+++++++|++++|+||||.++
T Consensus 116 ~~~~~l~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~ 191 (406)
T 1xi9_A 116 LIFGALLDPGDEILVPGPSYPP----YTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALY 191 (406)
T ss_dssp HHHHHHCCTTCEEEEEESCCHH----HHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred HHHHHhCCCCCEEEEcCCCCcc----HHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCc
Confidence 6677778999999999999985 556677889999888763 78999999988899999999999999999
Q ss_pred C---HHHHHHHHHhCCCcEEEEeCccCcccccC-CCC-----CcC-cEEEEcccccccCCCCceEEEEE--ecCh----H
Q psy12791 161 D---VKAISAVVKQHPDILLVLDNTFLTAYYQK-SLP-----WGV-DIVLYSLTKYMNGHSDVVMGATV--TNDD----S 224 (393)
Q Consensus 161 ~---~~~l~~l~~~~~~~~livDea~~~~~~~~-~~~-----~~~-di~~~S~sK~~~G~~G~r~G~~~--~~~~----~ 224 (393)
| +++|.++|+++ |+++|+||+|+.+.+.. +.. .++ +++++|+||++ |++|+|+||++ ++ + +
T Consensus 192 ~~~~l~~i~~~a~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~-~~~~~~ 268 (406)
T 1xi9_A 192 DKKTLEEILNIAGEY-EIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVY-FATGWRLGYMYFVDP-ENKLSE 268 (406)
T ss_dssp CHHHHHHHHHHHHHH-TCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTT-CCGGGCCEEEEEECT-TCTTHH
T ss_pred CHHHHHHHHHHHHHc-CCEEEEEcCccccccCCCCCCHHHcCCCceEEEEecccccc-CCCccEEEEEEEecC-chhHHH
Confidence 7 88999999999 99999999999865421 111 256 89999999999 68999999999 76 6 8
Q ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHhcc---C-CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhc
Q psy12791 225 LQARLKFLQNSMGVVPSPFDCWLVTRGL---K-TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQW 300 (393)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~ 300 (393)
+++.+....... ...++..+..+...+ . .+...+++..++.+.+.+.|+++|++.. ..+.
T Consensus 269 l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~-------------- 332 (406)
T 1xi9_A 269 VREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGIST-TKPQ-------------- 332 (406)
T ss_dssp HHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEEC-CCCC--------------
T ss_pred HHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCee-ecCC--------------
Confidence 888887665543 334444444333333 1 2444556667777888888887665431 1111
Q ss_pred CCCcceEEEEEcCC-HHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHH
Q psy12791 301 SGTSGMLSFYVNGG-AEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTD 378 (393)
Q Consensus 301 ~~~~~~~~~~~~~~-~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~ 378 (393)
.+.++++.++.. ......+.+.+. ..++.+..|..+.. ..++++|+|++ ++++
T Consensus 333 --~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---------------------~~~~~lRis~~--~~~~ 387 (406)
T 1xi9_A 333 --GAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGE---------------------YGAGHFRAVFL--PPIE 387 (406)
T ss_dssp --BSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCG---------------------GGTTBEEEECC--SCHH
T ss_pred --eeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCC---------------------CCCCEEEEEec--CCHH
Confidence 123456677420 112334444442 34555555443311 01579999998 5555
Q ss_pred HHHHHHHHHHHh
Q psy12791 379 LIADLDQALRKA 390 (393)
Q Consensus 379 ~i~~l~~al~~~ 390 (393)
+++.+.+.|.++
T Consensus 388 ~i~~~~~~l~~~ 399 (406)
T 1xi9_A 388 ILEEAMDRFEKF 399 (406)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 566555555543
No 65
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.97 E-value=1.5e-30 Score=247.09 Aligned_cols=316 Identities=13% Similarity=0.112 Sum_probs=211.5
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHH-HHHHHHHHh----C--CC-cEEEeccHHHH-H-HH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRN-LERCIASLE----E--AK-HGLCYSSGLGA-V-TA 89 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~-lr~~la~~~----~--~~-~~i~~~~G~~a-l-~~ 89 (393)
.+++| +.+.+++++++.+.+++.+.+.. ...| +.+ ..+ +|+++|+++ | .+ +.|++++|+++ + .+
T Consensus 28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y---~~~-~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~ 103 (390)
T 1d2f_A 28 ADLLPFTISDMDFATAPCIIEALNQRLMHGVFGY---SRW-KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSEL 103 (390)
T ss_dssp --CEECCSSSCSSCCCHHHHHHHHHHHTTCCCCC---CCS-CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHH
T ss_pred CCeeEeeecCCCCCCCHHHHHHHHHHHhCCCCCC---CCC-ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHH
Confidence 35677 77777777777666655433221 2233 334 566 899998876 4 33 67777777665 7 67
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC--------CCHHHHHhhcCC-CCcEEEEecCCCCccccc
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL--------RKIENLIKYIKP-NTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~--------~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~ 160 (393)
+..++++||+|+++.|+|++ +...++..|.+++.++. .|++++++.+.+ ++++|++++|+||||.++
T Consensus 104 ~~~l~~~gd~vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~ 179 (390)
T 1d2f_A 104 IRQWSETGEGVVIHTPAYDA----FYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVW 179 (390)
T ss_dssp HHHSSCTTCEEEEEESCCHH----HHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCC
T ss_pred HHHhcCCCCEEEEcCCCcHH----HHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCc
Confidence 77788899999999999985 55667788999988876 278999999876 789999999999999999
Q ss_pred C---HHHHHHHHHhCCCcEEEEeCccCcccccC--CCC---C--cC-cEEEEcccccccCCCCceEEEEEecChHHHHHH
Q psy12791 161 D---VKAISAVVKQHPDILLVLDNTFLTAYYQK--SLP---W--GV-DIVLYSLTKYMNGHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 161 ~---~~~l~~l~~~~~~~~livDea~~~~~~~~--~~~---~--~~-di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~ 229 (393)
| +++|.++|+++ |+++|+||+|+.+.... ... . +. |. +.|+||++ |++|+|+||++++++++.+.+
T Consensus 180 ~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~ 256 (390)
T 1d2f_A 180 TCDELEIMADLCERH-GVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSF-NIPALTGAYGIIENSSSRDAY 256 (390)
T ss_dssp CTTHHHHHHHHHHHT-TCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHH-TCGGGCCEEEEECSHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhh-cccChhheEEEECCHHHHHHH
Confidence 8 88999999999 99999999999865421 111 1 11 66 99999999 689999999998767888888
Q ss_pred HHHHH-hcC-CCCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHhh-CCCcceEeCCCCCCCcchHHHhhhcCC
Q psy12791 230 KFLQN-SMG-VVPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFLES-HPCVKGVLHPGLPSHPNHELAKSQWSG 302 (393)
Q Consensus 230 ~~~~~-~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~-~~~~~~v~~~~l~~~~~~~~~~~~~~~ 302 (393)
+.... ... +..++..+..+...++ .+...++...++.+.+.+.|++ +|++.. ..+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~---------------- 319 (390)
T 1d2f_A 257 LSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNW-QIPQ---------------- 319 (390)
T ss_dssp HHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC-CCCS----------------
T ss_pred HHHHhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEE-ecCC----------------
Confidence 76554 222 2455555444333332 2334455566777788888876 565431 1111
Q ss_pred CcceEEEEEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHH
Q psy12791 303 TSGMLSFYVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIA 381 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~ 381 (393)
.+.++++.+++.......+.+.+. ..++.+..|..+.. ..++++|+|++.. ++.++
T Consensus 320 ~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---------------------~~~~~~Ris~~~~--~~~l~ 376 (390)
T 1d2f_A 320 STYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGE---------------------EGRGFVRLNAGCP--RSKLE 376 (390)
T ss_dssp BCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCG---------------------GGTTEEEEECCSC--HHHHH
T ss_pred ccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCC---------------------CCCCeEEEEecCC--HHHHH
Confidence 123457887421012344555554 44666666544321 0157999999974 34444
Q ss_pred HHHHHHH
Q psy12791 382 DLDQALR 388 (393)
Q Consensus 382 ~l~~al~ 388 (393)
...+.|.
T Consensus 377 ~~l~~l~ 383 (390)
T 1d2f_A 377 KGVAGLI 383 (390)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 66
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.97 E-value=4.3e-30 Score=246.90 Aligned_cols=309 Identities=16% Similarity=0.145 Sum_probs=210.2
Q ss_pred CCccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHHhC-----CC-cEEEeccHHH-HH-HHHHHhcCCCCeEEE
Q psy12791 32 PIILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASLEE-----AK-HGLCYSSGLG-AV-TAVTHLLSAGDHIIS 102 (393)
Q Consensus 32 p~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~~~-----~~-~~i~~~~G~~-al-~~~~~~~~~gd~vl~ 102 (393)
++.+++.+.+++.+.+.. ..+..| +..+..++|+++|++++ .+ +.+++++|++ ++ .++..++++||+|++
T Consensus 69 ~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~ 147 (427)
T 3dyd_A 69 NLPTDPEVTQAMKDALDS-GKYNGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILV 147 (427)
T ss_dssp SSCCCHHHHHHHHHHHHH-CCSSSCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHhc-CcCCCCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEE
Confidence 455666666554332211 112234 34678899999999998 33 5666666655 57 777778899999999
Q ss_pred cCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhC
Q psy12791 103 GDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQH 172 (393)
Q Consensus 103 ~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~ 172 (393)
+.|+|.+ +...++..|++++.++.+ |++++++.+++++++|++++|+||||.++| +++|.++|+++
T Consensus 148 ~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 223 (427)
T 3dyd_A 148 PRPGFSL----YKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQ 223 (427)
T ss_dssp EESCCTH----HHHHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT
T ss_pred cCCCchh----HHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHC
Confidence 9999984 667788899999988763 799999999888999999999999999999 99999999999
Q ss_pred CCcEEEEeCccCcccccC----CC-CCc---CcEEEEcccccccCCCCceEEEEEecC------hHHHHHHHHHHHhcCC
Q psy12791 173 PDILLVLDNTFLTAYYQK----SL-PWG---VDIVLYSLTKYMNGHSDVVMGATVTND------DSLQARLKFLQNSMGV 238 (393)
Q Consensus 173 ~~~~livDea~~~~~~~~----~~-~~~---~di~~~S~sK~~~G~~G~r~G~~~~~~------~~~~~~~~~~~~~~~~ 238 (393)
|+++|+||+|..+.+.. ++ ..+ ..++++|+||.+ |++|+|+||+++++ +++.+.+....... .
T Consensus 224 -~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~-~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~~-~ 300 (427)
T 3dyd_A 224 -CVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRW-LVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRI-L 300 (427)
T ss_dssp -TCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTS-SCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHHH-C
T ss_pred -CCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccC-CCcCcceEEEEecCcchhhHHHHHHHHHHHHhcc-C
Confidence 99999999999865321 11 112 248899999999 69999999999975 36777666544332 3
Q ss_pred CCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC
Q psy12791 239 VPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG 313 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
..++..+..+...++ .+...+++..++++.+.+.|+++|++. +..|. .+.++++.+..
T Consensus 301 ~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~p~----------------~g~~~~~~l~~ 363 (427)
T 3dyd_A 301 GPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPGLR-PVRPS----------------GAMYLMVGIEM 363 (427)
T ss_dssp CSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTTEE-EECCS----------------BTTEEEEEECG
T ss_pred CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCC----------------eeEEEEEecCH
Confidence 344555444443332 244566677778888899998887764 33333 24567777741
Q ss_pred C----HHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 314 G----AEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 314 ~----~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
. ......+.+.+ +..++.+..|+.+. .++++|+|++ .+++.++.+.+.|.
T Consensus 364 ~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~-----------------------~~~~iRis~~--~~~e~i~~~l~~l~ 418 (427)
T 3dyd_A 364 EHFPEFENDVEFTERLVAEQSVHCLPATCFE-----------------------YPNFIRVVIT--VPEVMMLEACSRIQ 418 (427)
T ss_dssp GGCTTCSSHHHHHHHHHHHHCEECEEGGGGT-----------------------CTTEEEEESC--SCHHHHHHHHHHHH
T ss_pred hhcCCCCCHHHHHHHHHHHCCEEEECCcccC-----------------------CCCeEEEEEC--CCHHHHHHHHHHHH
Confidence 0 01223333333 23355555544321 1579999997 45555555555554
Q ss_pred Hh
Q psy12791 389 KA 390 (393)
Q Consensus 389 ~~ 390 (393)
++
T Consensus 419 ~~ 420 (427)
T 3dyd_A 419 EF 420 (427)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 67
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.97 E-value=2.3e-30 Score=248.91 Aligned_cols=326 Identities=14% Similarity=0.111 Sum_probs=221.2
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCC-chHHHHHHHHHHHh----CC---Cc-EEEeccHHHH-H-HH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNN-PTRRNLERCIASLE----EA---KH-GLCYSSGLGA-V-TA 89 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~-~~~~~lr~~la~~~----~~---~~-~i~~~~G~~a-l-~~ 89 (393)
+++| +.+.+++++++.+.+++.+.+.. ......|+. .+..++|+++|+++ |. ++ .+++++|+++ + .+
T Consensus 38 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~ 117 (429)
T 1yiz_A 38 KPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYAT 117 (429)
T ss_dssp CCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHH
Confidence 5667 67777777666666554332221 012233433 35788999999986 63 25 7888888665 7 66
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC---------------CCHHHHHhhcCCCCcEEEEecCCC
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL---------------RKIENLIKYIKPNTKMVWIENPTN 154 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~---------------~d~~~l~~~l~~~~~~v~l~~p~n 154 (393)
+..++++||+|+++.|+|++ +...++..|.+++.++. .|++++++.+.+++++|++++|+|
T Consensus 118 ~~~~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~n 193 (429)
T 1yiz_A 118 IQGHVDEGDEVIIIEPFFDC----YEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHN 193 (429)
T ss_dssp HHHHCCTTCEEEEEESCCTT----HHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCT
T ss_pred HHHhcCCCCEEEEcCCCchh----HHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCCC
Confidence 77778999999999999996 45556778999888865 268999999988899999999999
Q ss_pred CcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC----C---C--CCcCcEEEEcccccccCCCCceEEEEEecC
Q psy12791 155 PLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK----S---L--PWGVDIVLYSLTKYMNGHSDVVMGATVTND 222 (393)
Q Consensus 155 ptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~----~---~--~~~~di~~~S~sK~~~G~~G~r~G~~~~~~ 222 (393)
|||.++| +++|.++|+++ |+++|+||+|+.+.+.. + + ..++++++.|+||++ |++|+|+||++++
T Consensus 194 ptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~- 270 (429)
T 1yiz_A 194 PLGKVMDRAELEVVANLCKKW-NVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTF-SLTGWKIGWAYGP- 270 (429)
T ss_dssp TTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHH-TCGGGCCEEEESC-
T ss_pred CCCccCCHHHHHHHHHHHHHc-CcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhcc-CCCCcceEEEEeC-
Confidence 9999996 88999999999 99999999999754311 1 1 246789999999999 6899999999997
Q ss_pred hHHHHHHHHHHHhcCCCCCHHHHHHHHhcc----------CC-HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCc
Q psy12791 223 DSLQARLKFLQNSMGVVPSPFDCWLVTRGL----------KT-LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHP 291 (393)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~ 291 (393)
+++++.+...........++..+..+...+ +. +...++...++.+.+.+.|+++ ++. +..+.
T Consensus 271 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----- 343 (429)
T 1yiz_A 271 EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMN-PTVPQ----- 343 (429)
T ss_dssp HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCE-EEECS-----
T ss_pred HHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCC-----
Confidence 888888876654333344444443322222 22 4445566667777888888765 333 22222
Q ss_pred chHHHhhhcCCCcceEEEEEcCCH-----------HHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhh
Q psy12791 292 NHELAKSQWSGTSGMLSFYVNGGA-----------EETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDA 359 (393)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~ 359 (393)
.+.++++.+++.. .....+.+.+. ..++.+..|..+.....
T Consensus 344 -----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~---------------- 396 (429)
T 1yiz_A 344 -----------GGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPN---------------- 396 (429)
T ss_dssp -----------BSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGG----------------
T ss_pred -----------cceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcc----------------
Confidence 1457888885320 13445555442 44666665544321100
Q ss_pred cCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 360 LGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 360 ~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+..++++|||++. ++++++.+.+.|.++.
T Consensus 397 ~~~~~~~iRis~~~--~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 397 KHLGEDFVRYCFFK--KDENLQKAAEILRKWK 426 (429)
T ss_dssp GGGTTTEEEEECCS--CHHHHHHHHHHHHHHS
T ss_pred cCCCCCeEEEEecC--CHHHHHHHHHHHHHhc
Confidence 00125799999984 6777777777777654
No 68
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-30 Score=250.83 Aligned_cols=326 Identities=13% Similarity=0.122 Sum_probs=218.2
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHh----CC--C-cEEEeccHHH-HH-HHH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLE----EA--K-HGLCYSSGLG-AV-TAV 90 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~----~~--~-~~i~~~~G~~-al-~~~ 90 (393)
.+++| +...+++.+++.+.+++.+.+.. .....|+. .+..+||+++|+++ |. + +.|++++|++ ++ .++
T Consensus 57 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~ 135 (447)
T 3b46_A 57 RELINLGQGFFSYSPPQFAIKEAQKALDI-PMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCL 135 (447)
T ss_dssp SCCEECCCCSCSSCCCHHHHHHHHHHTTS-GGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHH
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhC-cCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHH
Confidence 35667 66666666665555554433222 11223433 36789999999986 32 2 5678888866 47 777
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC-----------------CCHHHHHhhcCCCCcEEEEecCC
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL-----------------RKIENLIKYIKPNTKMVWIENPT 153 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~-----------------~d~~~l~~~l~~~~~~v~l~~p~ 153 (393)
..++++||+|++++|+|++ +...++..|.+++.++. .|++++++.+.+++++|++++|+
T Consensus 136 ~~l~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~ 211 (447)
T 3b46_A 136 MGLLNAGDEVIVFEPFFDQ----YIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTPH 211 (447)
T ss_dssp HHHCCTTCEEEEEESCCTT----HHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESSC
T ss_pred HHHcCCCCEEEEeCCCchh----HHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCCC
Confidence 7888999999999999996 55667788999887763 26899999998889999999999
Q ss_pred CCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC---C---C---CCcCcEEEEcccccccCCCCceEEEEEec
Q psy12791 154 NPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK---S---L---PWGVDIVLYSLTKYMNGHSDVVMGATVTN 221 (393)
Q Consensus 154 nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~---~---~---~~~~di~~~S~sK~~~G~~G~r~G~~~~~ 221 (393)
||||.+++ +++|.++|+++ |+++|+||+|..+.+.. + + ..++++++.|+||++ |++|+|+||++++
T Consensus 212 nptG~~~~~~~l~~i~~l~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~-~~~G~riG~~~~~ 289 (447)
T 3b46_A 212 NPIGKVFTREELTTLGNICVKH-NVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSF-AATGWRIGWVLSL 289 (447)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHT-TCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHT-TCTTSCCEEEECS
T ss_pred CCCCcccCHHHHHHHHHHHHHc-CcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhc-CCcchhhEEEEeC
Confidence 99999986 88899999999 99999999999755421 1 1 125789999999999 6899999999993
Q ss_pred ChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC------HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHH
Q psy12791 222 DDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT------LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHEL 295 (393)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~ 295 (393)
++++++.+...........+...+..+...++. +...++++.++++.+.+.|+++ ++. +..|.
T Consensus 290 ~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~--------- 358 (447)
T 3b46_A 290 NAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLP-YTAPE--------- 358 (447)
T ss_dssp CHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCC-EECCS---------
T ss_pred CHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCC---------
Confidence 388888887655433334445444443333322 3345556667777788888765 333 22222
Q ss_pred HhhhcCCCcceEEEEEcCC--------------HHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhc
Q psy12791 296 AKSQWSGTSGMLSFYVNGG--------------AEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDAL 360 (393)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~ 360 (393)
.+.++++.++.. ......+.+.+. ..++.+.+|+.+......
T Consensus 359 -------~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~---------------- 415 (447)
T 3b46_A 359 -------GTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHE---------------- 415 (447)
T ss_dssp -------BSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGG----------------
T ss_pred -------eeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCcc----------------
Confidence 245678887421 123345555443 346666666544211000
Q ss_pred CCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 361 GITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 361 g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+..++++|||++. ++++++...+.|.++
T Consensus 416 ~~~~~~iRls~~~--~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 416 KAAENLLRFAVCK--DDAYLENAVERLKLL 443 (447)
T ss_dssp GGGTTEEEEECCS--CHHHHHHHHHHGGGG
T ss_pred CCCCCEEEEEEeC--CHHHHHHHHHHHHHH
Confidence 0115899999985 455566655555543
No 69
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.97 E-value=1.1e-29 Score=244.16 Aligned_cols=286 Identities=15% Similarity=0.164 Sum_probs=214.9
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENL 136 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l 136 (393)
.+...+|++.||+++|.++++++++|++++ .++..++++||.|+++.++|.+ +...++..|.+++.++..|++++
T Consensus 108 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al~~l~~~gd~vl~~~~~h~~----~~~~~~~~g~~~~~~~~~d~~~l 183 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHAS----IYDGCQQGNAEIVRFRHNSVEDL 183 (427)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHSCTTCEEEEETTCCHH----HHHHHHHSCSEEEEECTTCHHHH
T ss_pred cHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHHHHhcCCCCEEEECCcccHH----HHHHHHHcCCeeEEeCCCCHHHH
Confidence 467789999999999999999999999997 7777788999999999999985 44556778999999998899999
Q ss_pred HhhcCC----CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc---------CCCCCcCcEEEEcc
Q psy12791 137 IKYIKP----NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ---------KSLPWGVDIVLYSL 203 (393)
Q Consensus 137 ~~~l~~----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~---------~~~~~~~di~~~S~ 203 (393)
++.+.+ ++++|++++++||||.+.|+++|.++|+++ |+++|+||+|+.+... ..+..+.|+++.|+
T Consensus 184 e~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~-g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~ 262 (427)
T 2w8t_A 184 DKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKH-GAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTF 262 (427)
T ss_dssp HHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHT-TCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEES
T ss_pred HHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHc-CCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecc
Confidence 998865 789999999999999999999999999999 9999999999986543 11223569999999
Q ss_pred cccccCCCCceEEEEEecChHHHHHHHHH-H-HhcCCCCCHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHHHhhCCC
Q psy12791 204 TKYMNGHSDVVMGATVTNDDSLQARLKFL-Q-NSMGVVPSPFDCWLVTRGL---KTLPCRLKEHERGSIEVAKFLESHPC 278 (393)
Q Consensus 204 sK~~~G~~G~r~G~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (393)
||++ |++| ||++++ +++++.+... . ..++...++.....+...+ +.....+++..++.+.+.+.|++. +
T Consensus 263 sK~~-g~~g---G~v~~~-~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 336 (427)
T 2w8t_A 263 SKSV-GTVG---GFVVSN-HPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAM-G 336 (427)
T ss_dssp SSTT-CSCC---EEEEEC-CTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred hhhh-ccCC---CEEEeC-HHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-C
Confidence 9999 5665 999997 6777766543 1 2234455665554443333 334567777888888888888765 3
Q ss_pred cceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHh
Q psy12791 279 VKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRD 358 (393)
Q Consensus 279 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~ 358 (393)
+. +..+. ..++++++.++ +......+.+.|...++.+..+..++..
T Consensus 337 ~~-~~~~~---------------~~~~~~~~~~~-~~~~~~~l~~~L~~~Gi~v~~~~~~~~~----------------- 382 (427)
T 2w8t_A 337 FR-LGTET---------------CDSAIVAVMLE-DQEQAAMMWQALLDGGLYVNMARPPATP----------------- 382 (427)
T ss_dssp CE-ESCSS---------------CCSSEEEEEES-SHHHHHHHHHHHHHTTEECEEECTTTSC-----------------
T ss_pred Cc-ccCCC---------------CCCCEEEEEEC-CHHHHHHHHHHHHHCCeEEeeeCCCCCC-----------------
Confidence 22 21011 02578999994 5556667777776556665554322110
Q ss_pred hcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 359 ALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 359 ~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
...+++|++++..+++++++.+.++|+++.
T Consensus 383 ---~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l 412 (427)
T 2w8t_A 383 ---AGTFLLRCSICAEHTPAQIQTVLGMFQAAG 412 (427)
T ss_dssp ---TTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred ---CCCeEEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 124799999999888888888888887653
No 70
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.97 E-value=3.3e-30 Score=246.30 Aligned_cols=319 Identities=18% Similarity=0.207 Sum_probs=215.9
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC-chHHHHHHHHHHHhC------CC-cEEEeccHHH-HH-HHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN-PTRRNLERCIASLEE------AK-HGLCYSSGLG-AV-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~-~~~~~lr~~la~~~~------~~-~~i~~~~G~~-al-~~~~ 91 (393)
+++| +++.+++.+++.+.+++ +.+... ...|+. .+..++|+++|++++ .+ +.+++++|++ ++ .++.
T Consensus 44 ~~i~l~~~~~~~~~~~~v~~a~-~~l~~~--~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~ 120 (409)
T 2gb3_A 44 RIHHLNIGQPDLKTPEVFFERI-YENKPE--VVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFA 120 (409)
T ss_dssp EEEECSSCCCCSCCCTHHHHHH-HHTCCS--SCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHH
T ss_pred CEEeccCCCCCCCCCHHHHHHH-HHHhcC--CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHH
Confidence 4566 67777776666666655 443221 122333 457899999999874 22 5666666655 57 6777
Q ss_pred HhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCC------HHHHHhhcCCCCcEEEEecCCCCcccccC---H
Q psy12791 92 HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRK------IENLIKYIKPNTKMVWIENPTNPLMTVFD---V 162 (393)
Q Consensus 92 ~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d------~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~ 162 (393)
.++++||+|++++|+|++ +...++..|.+++.++.++ ++++++.+.+++++|++++|+||||.++| +
T Consensus 121 ~~~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l 196 (409)
T 2gb3_A 121 VIANPGDEILVLEPFYAN----YNAFAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEM 196 (409)
T ss_dssp HHCCTTCEEEEEESCCTH----HHHHHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHH
T ss_pred HhCCCCCEEEEcCCCchh----HHHHHHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHH
Confidence 778999999999999985 5556677899999988752 67888888888999999999999999986 7
Q ss_pred HHHHHHHHhCCCcEEEEeCccCcccccC---C-CC--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc
Q psy12791 163 KAISAVVKQHPDILLVLDNTFLTAYYQK---S-LP--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM 236 (393)
Q Consensus 163 ~~l~~l~~~~~~~~livDea~~~~~~~~---~-~~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~ 236 (393)
++|.++|+++ |+++|+||+|+.+.... + +. .++|+++.|+||++ |++|+|+||++++++++.+.++.....+
T Consensus 197 ~~i~~~~~~~-~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~l~~~l~~~~~~~ 274 (409)
T 2gb3_A 197 RYLVEIAERH-GLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKF-SACGARVGCLITRNEELISHAMKLAQGR 274 (409)
T ss_dssp HHHHHHHHHT-TCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTT-TCGGGCCEEEECSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHc-CCEEEEECcccccccCCCCCCccccCCCCEEEEecchhcc-CCccceEEEEEECcHHHHHHHHHHHhcc
Confidence 8999999999 99999999999865321 1 11 25789999999999 6899999999998448888887766655
Q ss_pred CCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc
Q psy12791 237 GVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN 312 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
. ..++..+..+...++. +...+++..++.+.+.+.|+++ ++..+..|. .+.++++.++
T Consensus 275 ~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~----------------~~~~~~~~~~ 336 (409)
T 2gb3_A 275 L-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH-GLKRFTKPS----------------GAFYITAELP 336 (409)
T ss_dssp C-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCS----------------BSSEEEEECS
T ss_pred C-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeCCC----------------eeEEEEEEeC
Confidence 4 5566666555555533 3334555667777788888765 332101111 1345677774
Q ss_pred CCHHHHHHHHHhcCcc------ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHH
Q psy12791 313 GGAEETRIFLESLLIF------RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQA 386 (393)
Q Consensus 313 ~~~~~~~~~~~~l~~~------~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~a 386 (393)
+ .....+.+.+... ++.+..|..+... + +..++++|++++ .++++++.+.++
T Consensus 337 ~--~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~--~----------------~~~~~~iRis~~--~~~e~i~~~~~~ 394 (409)
T 2gb3_A 337 V--EDAEEFARWMLTDFNMDGETTMVAPLRGFYLT--P----------------GLGKKEIRIACV--LEKDLLSRAIDV 394 (409)
T ss_dssp S--SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSS--T----------------TTTSSEEEEECC--SCHHHHHHHHHH
T ss_pred C--CCHHHHHHHHHhccccccCcEEEeCchHhCCC--C----------------CCCCCEEEEEeC--CCHHHHHHHHHH
Confidence 2 1223344444322 5555554332110 0 112689999998 566666666655
Q ss_pred HHHh
Q psy12791 387 LRKA 390 (393)
Q Consensus 387 l~~~ 390 (393)
|+++
T Consensus 395 l~~~ 398 (409)
T 2gb3_A 395 LMEG 398 (409)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 71
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.97 E-value=8.6e-31 Score=251.33 Aligned_cols=323 Identities=17% Similarity=0.134 Sum_probs=220.3
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCC-CCccccCCCCchHHHHHHHHHHHhC--CC-cEEEeccHHH-HH-HHHHHhcC
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPP-QGFEYSRSNNPTRRNLERCIASLEE--AK-HGLCYSSGLG-AV-TAVTHLLS 95 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~lr~~la~~~~--~~-~~i~~~~G~~-al-~~~~~~~~ 95 (393)
+++| +...+++.+++.+.+++.+.+. ..+.|+....+..+++++.+++.++ .+ +.|++++|++ ++ .++..+++
T Consensus 62 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~ 141 (421)
T 3l8a_A 62 ELLQMWVADMDFLPVPEIKEAIINYGREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSE 141 (421)
T ss_dssp TCEECCSSCCCSCCCHHHHHHHHHHHHHCCSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC
T ss_pred CeeecccCCCCCCCCHHHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcC
Confidence 5567 6666777777777665544321 2355665444555566666666667 33 6677777766 57 77777889
Q ss_pred CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--------CHHHHHhhcC-CCCcEEEEecCCCCcccccC---HH
Q psy12791 96 AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--------KIENLIKYIK-PNTKMVWIENPTNPLMTVFD---VK 163 (393)
Q Consensus 96 ~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--------d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~---~~ 163 (393)
+||+|+++.|+|++ +...++..|.+++.+|.+ |++++++++. +++++|++++|+||||.+++ ++
T Consensus 142 ~gd~Vi~~~~~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~ 217 (421)
T 3l8a_A 142 KGDAVLINSPVYYP----FARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLI 217 (421)
T ss_dssp TEEEEEEEESCCHH----HHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHH
T ss_pred CCCEEEECCCCcHH----HHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHH
Confidence 99999999999986 555667789999988864 8999999997 78999999999999999965 88
Q ss_pred HHHHHHHhCCCcEEEEeCccCcccccC----C---C--C-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH
Q psy12791 164 AISAVVKQHPDILLVLDNTFLTAYYQK----S---L--P-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ 233 (393)
Q Consensus 164 ~l~~l~~~~~~~~livDea~~~~~~~~----~---~--~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~ 233 (393)
+|.++|+++ |+++|+||+|+.+.... + + + .+.++++.|+||++ |++|+|+||++++++++.+.+....
T Consensus 218 ~l~~l~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~~~G~~~~~~~~l~~~~~~~~ 295 (421)
T 3l8a_A 218 KIAELCKKH-GVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTF-NIAGTKNSFAIIQNESLRRKFQYRQ 295 (421)
T ss_dssp HHHHHHHHH-TCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHH-TCGGGCCEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhc-cCchhheEeEEcCCHHHHHHHHHHH
Confidence 899999999 99999999998754321 1 1 1 24569999999999 6899999999998788888887665
Q ss_pred HhcCC-CCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEE
Q psy12791 234 NSMGV-VPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLS 308 (393)
Q Consensus 234 ~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 308 (393)
...+. ..++..+..+...++ .+....+...++.+.+.+.|+++|.+..+ .+. .+.++|
T Consensus 296 ~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~-~~~----------------~~~~~~ 358 (421)
T 3l8a_A 296 LANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNIKLVIKELEAKTKIKVM-EPE----------------GTYLVW 358 (421)
T ss_dssp HHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEE-CCS----------------BSSEEE
T ss_pred HhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEe-CCC----------------eeEEEE
Confidence 43332 455555444433332 24445666677788888888876665432 222 123456
Q ss_pred EEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 309 FYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
+.++........+.+.+ +..++.+..|..+.. ..++++||+++ .++++++...+.|
T Consensus 359 v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---------------------~~~~~iRi~~~--~~~~~i~~~l~~l 415 (421)
T 3l8a_A 359 LDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGK---------------------EGKYFARLNVA--TPKNTVQEALSRI 415 (421)
T ss_dssp EECGGGTCCTTHHHHHHHHTTCEECEEGGGGCG---------------------GGTTEEEEECC--SCHHHHHHHHHHH
T ss_pred EeccccCCCHHHHHHHHHHhCCEEEECchhhCC---------------------CCCCEEEEEec--CCHHHHHHHHHHH
Confidence 87742111223344444 233555555544321 12689999998 4666677777776
Q ss_pred HHhh
Q psy12791 388 RKAC 391 (393)
Q Consensus 388 ~~~~ 391 (393)
+++.
T Consensus 416 ~~~l 419 (421)
T 3l8a_A 416 ISVF 419 (421)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 6543
No 72
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.97 E-value=2.4e-30 Score=240.70 Aligned_cols=300 Identities=14% Similarity=0.143 Sum_probs=209.6
Q ss_pred CCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhC---CC-cEEEeccHHHH-H-HHH
Q psy12791 18 GSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEE---AK-HGLCYSSGLGA-V-TAV 90 (393)
Q Consensus 18 g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~---~~-~~i~~~~G~~a-l-~~~ 90 (393)
|..+.+++| +++.+|+++++.+.+++.+.+.. .....|+++...++|+++|++++ .+ +++++++|+++ + .++
T Consensus 15 ~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~ 93 (335)
T 1uu1_A 15 ETEKRDKTYLALNENPFPFPEDLVDEVFRRLNS-DALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMM 93 (335)
T ss_dssp CCCCCCSEEESSCCCSSCCCHHHHHHHHHTCCG-GGGGSCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHH
T ss_pred CCCCCcceECCCCCCCCCCCHHHHHHHHHHhhh-hhhhcCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHH
Confidence 433456778 88888887777777665544311 22344555668899999999999 54 67888888665 6 444
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHH
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAI 165 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l 165 (393)
..+ ||+|+++ |+|++ +...++..|.+++.++.+ |++++ +++++|++++||||||.++|.+++
T Consensus 94 ~~~---gd~Vl~~-p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~l 160 (335)
T 1uu1_A 94 LMF---DRSVFFP-PTYSC----YRIFAKAVGAKFLEVPLTKDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREEI 160 (335)
T ss_dssp HHS---SEEEECS-SSCHH----HHHHHHHHTCEEEECCCCTTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHHH
T ss_pred HHh---CCcEEEC-CCcHH----HHHHHHHcCCeEEEeccCCCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHHH
Confidence 444 8999999 99985 556677789999999874 33333 578999999999999999999999
Q ss_pred HHHHHhCCCcEEEEeCccCcccccCCC----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCC
Q psy12791 166 SAVVKQHPDILLVLDNTFLTAYYQKSL----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPS 241 (393)
Q Consensus 166 ~~l~~~~~~~~livDea~~~~~~~~~~----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (393)
.++++.+ | ++|+||+|+.+...... ..+++++++|+||++ |++|+|+||++++ +++.+.++.....+ ..+
T Consensus 161 ~~l~~~~-~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~l~~~~~~~--~~~ 234 (335)
T 1uu1_A 161 ERILKTG-A-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAF-SLAAQRVGYVVAS-EKFIDAYNRVRLPF--NVS 234 (335)
T ss_dssp HHHHHTT-C-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTT-TCGGGCCEEEEEC-HHHHHHHHHHSCTT--CSC
T ss_pred HHHHHhC-C-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhc-CCcccCeEEEEeC-HHHHHHHHHhcCCC--CcC
Confidence 9999999 9 99999999865432111 135689999999999 6899999999996 88888877654332 455
Q ss_pred HHHHHHHHhccCC---HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHH
Q psy12791 242 PFDCWLVTRGLKT---LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEET 318 (393)
Q Consensus 242 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
+..+..+...++. +...+++..++++.+.+.|+++ ++. + .|. .+.++++.++ . ...
T Consensus 235 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~----------------~~~~~~~~~~-~-~~~ 293 (335)
T 1uu1_A 235 YVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYR-I-TDS----------------RGNFVFVFME-K-EEK 293 (335)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCC----------------CSSEEEEECC-T-HHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CcE-E-cCC----------------CCeEEEEECC-C-CCH
Confidence 5555555544443 3445566667777888888764 322 1 122 2467888884 3 344
Q ss_pred HHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 319 RIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 319 ~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
..+.+.+...++.+.. .++++|+|++. +++++.+.++|++
T Consensus 294 ~~~~~~l~~~gi~v~~----------------------------~~~~iRis~~~---~~~i~~~~~~l~~ 333 (335)
T 1uu1_A 294 ERLLEHLRTKNVAVRS----------------------------FREGVRITIGK---REENDMILRELEV 333 (335)
T ss_dssp HHHHHHHHHHTEEEEE----------------------------ETTEEEEECCC---HHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCEEEEE----------------------------CCCeEEEEeCC---HHHHHHHHHHHHh
Confidence 4555555443444322 05789999964 3557777777664
No 73
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.97 E-value=8.2e-29 Score=235.71 Aligned_cols=319 Identities=12% Similarity=0.113 Sum_probs=223.1
Q ss_pred CCCCC-CCCCC-CCccCCeeeeCCCCCCCC-Ccccc-----CCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHH
Q psy12791 22 DQWRS-QCVIP-PIILSTTFKQNTPGQPPQ-GFEYS-----RSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTH 92 (393)
Q Consensus 22 ~~~~~-~~~~~-p~~~~~~~~~~~~~~~~~-~~~y~-----~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~ 92 (393)
.+++| +++.+ ++.+++.+.+++.+.+.. ...|. ....+..+++++.+++++|.++.+++++|++++ .++..
T Consensus 43 ~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~~ 122 (398)
T 3a2b_A 43 RRVLMFGSNSYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLSC 122 (398)
T ss_dssp EEEEECSCSCTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHH
T ss_pred ceEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHH
Confidence 35667 66655 444555555543322110 11121 112466788999999999987767777777778 77778
Q ss_pred hcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCC----CCcEEEEecCCCCcccccCHHHHHHH
Q psy12791 93 LLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKP----NTKMVWIENPTNPLMTVFDVKAISAV 168 (393)
Q Consensus 93 ~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~----~~~~v~l~~p~nptG~~~~~~~l~~l 168 (393)
++++||.|+++.|+|++ +...++..|.+++.++..|++++++.+.+ ++++|++++|+||||.++|+++|.++
T Consensus 123 ~~~~gd~V~~~~p~~~~----~~~~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~ 198 (398)
T 3a2b_A 123 LMGRNDYILLDERDHAS----IIDGSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSI 198 (398)
T ss_dssp SSCTTCEEEEETTCCHH----HHHHHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHH
T ss_pred HhCCCCEEEECCccCHH----HHHHHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHH
Confidence 88999999999999985 55667788999999998899999998876 78999999999999999999999999
Q ss_pred HHhCCCcEEEEeCccCccccc---CCC-C-C----cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH-H-HhcC
Q psy12791 169 VKQHPDILLVLDNTFLTAYYQ---KSL-P-W----GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL-Q-NSMG 237 (393)
Q Consensus 169 ~~~~~~~~livDea~~~~~~~---~~~-~-~----~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~-~-~~~~ 237 (393)
|+++ |+++|+||+|+.+.+. .+. . . +.|++++|+||++ |++| ||++++ +++++.++.. . ....
T Consensus 199 ~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~-~~~G---G~~~~~-~~~~~~l~~~~~~~~~~ 272 (398)
T 3a2b_A 199 ANEF-DAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSL-ASLG---GFVAGD-ADVIDFLKHNARSVMFS 272 (398)
T ss_dssp HHHH-TCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTT-CSSC---EEEEEC-HHHHHHHHHHCHHHHSS
T ss_pred HHHc-CcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccc-cCCC---cEEEeC-HHHHHHHHHhcccceec
Confidence 9999 9999999999876431 111 1 1 2489999999999 5777 999997 8888888664 2 2333
Q ss_pred CCCCHHHHHHHHhccCCH---HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC
Q psy12791 238 VVPSPFDCWLVTRGLKTL---PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG 314 (393)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
...++.+...+...++.. ...+++..++.+.+.+.|++. ++. +..+ .+.++++.++ +
T Consensus 273 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~-----------------~g~~~~~~~~-~ 332 (398)
T 3a2b_A 273 ASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKAQLLDH-GFD-LGAT-----------------ESPILPIFIR-S 332 (398)
T ss_dssp BCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHT-TCC-BCSC-----------------CSSEEEEECC-C
T ss_pred CCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHhc-CCC-cCCC-----------------CCCEEEEEcC-C
Confidence 445555543333333222 245666677778888888765 322 1111 2578888884 4
Q ss_pred HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 315 AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
......+.+.+...++.+..|..+... ..++++|+|++...++++++.+.++|+++
T Consensus 333 ~~~~~~l~~~l~~~gi~v~~~~~~~~~--------------------~~~~~iRis~~~~~~~e~i~~~~~~l~~~ 388 (398)
T 3a2b_A 333 NEKTFWVTKMLQDDGVFVNPVVSPAVP--------------------AEESLIRFSLMATHTYDQIDEAIEKMVKV 388 (398)
T ss_dssp HHHHHHHHHHHHHTTEECEEECTTTSC--------------------GGGCEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCcEEEeeCCCCCC--------------------CCCceEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 445566666665546666655433210 01589999999988888888888877755
No 74
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.97 E-value=2.7e-29 Score=241.37 Aligned_cols=291 Identities=13% Similarity=0.059 Sum_probs=202.7
Q ss_pred cCCCC-chHHHHHHHHHHHhCCC-cEEEeccHHHH-H---HHHHHhcC--C----------CCeEEEcCCCccchHHHHH
Q psy12791 54 SRSNN-PTRRNLERCIASLEEAK-HGLCYSSGLGA-V---TAVTHLLS--A----------GDHIISGDDVYGGTYRYFA 115 (393)
Q Consensus 54 ~~~~~-~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l---~~~~~~~~--~----------gd~vl~~~~~y~~~~~~~~ 115 (393)
..|++ .+..+||+++|++++++ ++|++|+|+++ + .++..++. + ||+|++++|+|.+ +.
T Consensus 72 ~~Y~~~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~----~~ 147 (427)
T 3ppl_A 72 RNYGGLDGIVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDR----HF 147 (427)
T ss_dssp TSSCCSSCCHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHH----HH
T ss_pred cCCCCCCCcHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHH----HH
Confidence 34443 57889999999999987 78999999876 6 24445566 6 8999999999985 66
Q ss_pred HhcccCCcEEEeeCCC----CHHHHHhhcC-CCCcEEEEe-cCCCCcccccCHH---HHHHHH-HhCCCcEEEEeCccCc
Q psy12791 116 QVAPKIGLEVDFVDLR----KIENLIKYIK-PNTKMVWIE-NPTNPLMTVFDVK---AISAVV-KQHPDILLVLDNTFLT 185 (393)
Q Consensus 116 ~~~~~~g~~v~~~~~~----d~~~l~~~l~-~~~~~v~l~-~p~nptG~~~~~~---~l~~l~-~~~~~~~livDea~~~ 185 (393)
..++..|++++.++.+ |++++++++. +++++|+++ +||||||.++|.+ +|.++| +++ |+++|+||+|+.
T Consensus 148 ~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~-~~~ii~De~y~~ 226 (427)
T 3ppl_A 148 SITERFGFEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAP-DFRVVWDNAYAV 226 (427)
T ss_dssp HHHHHTTCEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSST-TCEEEEECTTTT
T ss_pred HHHHHcCCEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcC-CCEEEEECCCcc
Confidence 7778899999999875 8999999994 578999875 8999999999966 888888 899 999999999997
Q ss_pred ccccC----CC----------CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Q psy12791 186 AYYQK----SL----------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRG 251 (393)
Q Consensus 186 ~~~~~----~~----------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (393)
+.+.. +. ..+++++++||||++ .+|+|+||++++ +++++.+...........+...+..+...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~--~~G~r~G~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~ 303 (427)
T 3ppl_A 227 HTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKIT--LAGAGVSFFLTS-AENRKWYTGHAGIRGIGPNKVNQLAHARY 303 (427)
T ss_dssp CBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTS--CTTSSCEEEECC-HHHHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred cccCCCCCCccchhhhhhccCCCCcEEEEechhhcc--CcCccEEEEEcC-HHHHHHHHHHhhcccCCCCHHHHHHHHHH
Confidence 44321 11 235679999999994 679999999997 88999888777666666777776666655
Q ss_pred cCC-------HHHHHHHHHHHHHHHHHHHhh-CCCc--ceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHH
Q psy12791 252 LKT-------LPCRLKEHERGSIEVAKFLES-HPCV--KGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIF 321 (393)
Q Consensus 252 ~~~-------~~~~~~~~~~~~~~l~~~l~~-~~~~--~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
++. +...++.+.++.+.+.+.|.+ ++.+ ..+..|. .+.++++.+++. ..+.+
T Consensus 304 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~----------------~g~~~~~~~~~~--~~~~~ 365 (427)
T 3ppl_A 304 FGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPA----------------GGYFISLDVVPG--TASRV 365 (427)
T ss_dssp HCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCS----------------BSSCEEEECSTT--CHHHH
T ss_pred HhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCC----------------ccEEEEEECCcc--hHHHH
Confidence 554 222333444555566666643 2211 1122222 256789998532 24445
Q ss_pred HHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHH
Q psy12791 322 LESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALR 388 (393)
Q Consensus 322 ~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~ 388 (393)
.+.+...++.+..|+.+..... +..++++|||++.. ++++++...+.|.
T Consensus 366 ~~~l~~~gv~v~~~g~~~~~~~-----------------~~~~~~~Ris~~~~-~~~~i~~~~~~l~ 414 (427)
T 3ppl_A 366 AELAKEAGIALTGAGSSYPLRQ-----------------DPENKNLRLAPSLP-PVEELEVAMDGVA 414 (427)
T ss_dssp HHHHHHTTEECCCTTTTSGGGC-----------------CTTSCEEEECCSSS-CHHHHHHHHHHHH
T ss_pred HHHHHHCCCEEecCcCcCCCCC-----------------CCCCCeEEEECCCC-CHHHHHHHHHHHH
Confidence 5555555777777543221100 01268999999876 4444444444443
No 75
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.97 E-value=3e-30 Score=246.79 Aligned_cols=329 Identities=16% Similarity=0.124 Sum_probs=213.7
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHh----CC---Cc-EEEeccHHHH-H-HHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLE----EA---KH-GLCYSSGLGA-V-TAV 90 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~----~~---~~-~i~~~~G~~a-l-~~~ 90 (393)
+.+| +.+.+++.+++.+.+++.+.+.. ...|.. ..+..++|+++|+++ |. ++ .+++++|+++ + .++
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~ 103 (411)
T 2o0r_A 26 GAVNLGQGFPDEDGPPKMLQAAQDAIAGGVNQYPP--GPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAV 103 (411)
T ss_dssp TCEESSCSSCSSCCCHHHHHHHHHHHHTTCCSCCC--TTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHH
T ss_pred CeeeccCcCCCCCCCHHHHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHH
Confidence 4566 66777766666665554333221 223332 234678999999986 53 24 7888887664 7 667
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC--------CCHHHHHhhcCCCCcEEEEecCCCCcccccC-
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL--------RKIENLIKYIKPNTKMVWIENPTNPLMTVFD- 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~--------~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~- 161 (393)
..++++||+|+++.|+|++ +...++..|.+++.++. .|++++++.+.+++++|++++|+||||.++|
T Consensus 104 ~~~~~~gd~Vl~~~~~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~ 179 (411)
T 2o0r_A 104 LGLVEPGSEVLLIEPFYDS----YSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSA 179 (411)
T ss_dssp HHHCCTTCEEEEEESCCTT----HHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHhcCCCCEEEEeCCCcHh----HHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCH
Confidence 7778999999999999996 45556788999988876 2789999999888999999999999999998
Q ss_pred --HHHHHHHHHhCCCcEEEEeCccCcccccC----CC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH
Q psy12791 162 --VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK 230 (393)
Q Consensus 162 --~~~l~~l~~~~~~~~livDea~~~~~~~~----~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~ 230 (393)
+++|.++|+++ |+++|+||+|+.+.+.. ++ ..++|+++.|+||++ |++|+|+||++++ +++++.+.
T Consensus 180 ~~l~~i~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~ 256 (411)
T 2o0r_A 180 TELAAIAEIAVAA-NLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMF-NCTGWKIGWACGP-AELIAGVR 256 (411)
T ss_dssp HHHHHHHHHHHHT-TCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHT-TCTTTCEEEEECC-HHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhc-CCccceEEEEeeC-HHHHHHHH
Confidence 58999999999 99999999999765321 11 135789999999999 6999999999997 88888887
Q ss_pred HHHHhcCCCCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcce
Q psy12791 231 FLQNSMGVVPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGM 306 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~ 306 (393)
..........++..+..+...++ .+...+++..++.+.+.+.|++. ++. +..+. .+.+
T Consensus 257 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~g~~ 318 (411)
T 2o0r_A 257 AAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEI-GFA-VHDSY----------------GTYF 318 (411)
T ss_dssp HHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH-TCE-ECCCC----------------BSSE
T ss_pred HHHhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCE-ecCCC----------------eeEE
Confidence 65543332233333222222222 23344555666777777777754 332 21121 1347
Q ss_pred EEEEEcCC-HHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHH
Q psy12791 307 LSFYVNGG-AEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLD 384 (393)
Q Consensus 307 ~~~~~~~~-~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~ 384 (393)
+++.+++. ......+.+.+. ..++.+..|..++.....+ .+.. ....++++|||++. ++++++.+.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~--~~~~--------~~~~~~~iRis~~~--~~e~i~~~~ 386 (411)
T 2o0r_A 319 LCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQ--ASQQ--------ADVWNHLVRFTFCK--RDDTLDEAI 386 (411)
T ss_dssp EEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC------------------CCGGGCEEEECCS--CHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCcccc--cccc--------ccCCCCeEEEEecC--CHHHHHHHH
Confidence 88888520 011234444432 3355555554431100000 0000 00125789999974 566677777
Q ss_pred HHHHHh
Q psy12791 385 QALRKA 390 (393)
Q Consensus 385 ~al~~~ 390 (393)
++|+++
T Consensus 387 ~~l~~~ 392 (411)
T 2o0r_A 387 RRLSVL 392 (411)
T ss_dssp HHHGGG
T ss_pred HHHHHH
Confidence 777654
No 76
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.97 E-value=1e-30 Score=244.15 Aligned_cols=316 Identities=19% Similarity=0.141 Sum_probs=208.7
Q ss_pred CCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCC
Q psy12791 21 PDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGD 98 (393)
Q Consensus 21 ~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd 98 (393)
|++++| ++|++|+ |++.+.+.+.+.......|. +++...+||+++|+++|.++.+++++|++++ .++..++++||
T Consensus 2 ~~~~i~~~~~~~~~-p~~~~~~a~~~~~~~~~~y~--~~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~~~~~gd 78 (347)
T 1jg8_A 2 PHMMIDLRSDTVTK-PTEEMRKAMAQAEVGDDVYG--EDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQRGD 78 (347)
T ss_dssp ---CEECSCGGGCC-CCHHHHHHHHTCCCCCGGGT--CCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTC
T ss_pred CceEEEeccccCCC-CCHHHHHHHhcCCCCCcccC--CChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHHhcCCCC
Confidence 567788 8899988 66666665543322222333 5688899999999999998899999999887 77777889999
Q ss_pred eEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC------CCcEEEEecCCCCc-ccccC---HH
Q psy12791 99 HIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP------NTKMVWIENPTNPL-MTVFD---VK 163 (393)
Q Consensus 99 ~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~------~~~~v~l~~p~npt-G~~~~---~~ 163 (393)
+|++++|+|.+++.. ...++..|++++.+ .+ |++++++++++ ++++|++++||||| |.++| ++
T Consensus 79 ~Vl~~~~~~~~~~~~-~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~ 156 (347)
T 1jg8_A 79 EVILEADSHIFWYEV-GAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIK 156 (347)
T ss_dssp EEEEETTCHHHHSST-THHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred EEEEcCcchhhhccc-cchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHH
Confidence 999999999753211 12356678898888 43 89999999875 68999999999999 99998 46
Q ss_pred HHHHHHHhCCCcEEEEeCccCccc---ccCC---CCCcCcEEEEcccccccCCCCceEE-EEEecChHHHHHHHHHHHhc
Q psy12791 164 AISAVVKQHPDILLVLDNTFLTAY---YQKS---LPWGVDIVLYSLTKYMNGHSDVVMG-ATVTNDDSLQARLKFLQNSM 236 (393)
Q Consensus 164 ~l~~l~~~~~~~~livDea~~~~~---~~~~---~~~~~di~~~S~sK~~~G~~G~r~G-~~~~~~~~~~~~~~~~~~~~ 236 (393)
+|.++|+++ |+++++|++|..+. ...+ +..+.|.++.|+||+++ .+ +| +++++ ++++++++.....+
T Consensus 157 ~i~~~a~~~-~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~-~~---~G~~~~~~-~~~~~~~~~~~~~~ 230 (347)
T 1jg8_A 157 EICTIAKEH-GINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLC-AP---VGSVVVGD-RDFIERARKARKML 230 (347)
T ss_dssp HHHHHHHHH-TCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTC-CS---SCEEEEEC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHC-CCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccC-CC---ceEEEEcC-HHHHHHHHHHHHHc
Confidence 888999999 99999999875321 1111 11246777889999995 43 45 55665 88888877665555
Q ss_pred CCCC--CHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC
Q psy12791 237 GVVP--SPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG 314 (393)
Q Consensus 237 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
+... +...+..+...++....++++..++++.+.+.|+++ ++. +..+ ...++++++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~---------------~~~~~~~~~~~~~~ 293 (347)
T 1jg8_A 231 GGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEI-GYS-VNPE---------------DVKTNMVILRTDNL 293 (347)
T ss_dssp TCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHHH-TCB-CCGG---------------GCCSSEEEEECTTS
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Cce-eccC---------------CCcceEEEEEcccc
Confidence 4333 333333322222111112233345667777778754 322 1110 11256788888521
Q ss_pred HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 315 AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
......+.+.|...++.+..++ ++++|++++...++++++.+.++|+++.
T Consensus 294 ~~~~~~~~~~l~~~gi~v~~~~---------------------------~~~iRl~~~~~~~~e~i~~~~~~l~~~l 343 (347)
T 1jg8_A 294 KVNAHGFIEALRNSGVLANAVS---------------------------DTEIRLVTHKDVSRNDIEEALNIFEKLF 343 (347)
T ss_dssp SSCHHHHHHHHHHHTEECEEEE---------------------------TTEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHCCCEEecCC---------------------------CCeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 1123445555544444443210 3689999998888888888888887653
No 77
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.97 E-value=2.8e-29 Score=237.68 Aligned_cols=314 Identities=14% Similarity=0.108 Sum_probs=216.5
Q ss_pred CCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--cEEEeccHHH-HH-HHHHHhcCCCCeEEEcCC
Q psy12791 30 IPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK--HGLCYSSGLG-AV-TAVTHLLSAGDHIISGDD 105 (393)
Q Consensus 30 ~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~--~~i~~~~G~~-al-~~~~~~~~~gd~vl~~~~ 105 (393)
.+|...++.+.+++.+.... .|+....+..+++++.+++++|.+ +.+++++|++ ++ .++.+++++||+|++++|
T Consensus 26 ~~~~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~ 103 (386)
T 2dr1_A 26 AGPVACFPEVLEIMKVQMFS--HRSKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTII 103 (386)
T ss_dssp SSSCCCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEES
T ss_pred CCCcCCcHHHHHHHhccccc--ccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcC
Confidence 44545555666666554321 232212356788999999999987 6676666655 57 677777899999999999
Q ss_pred CccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhc--CCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEE
Q psy12791 106 VYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYI--KPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLV 178 (393)
Q Consensus 106 ~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l--~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~li 178 (393)
+|++. .+...++..|++++.++.+ |++++++.+ .+++++|++++|+||||.+.|+++|.++|+++ |+++|
T Consensus 104 ~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~li 180 (386)
T 2dr1_A 104 GAFGK--RYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEH-DKLVF 180 (386)
T ss_dssp SHHHH--HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHT-TCEEE
T ss_pred CchhH--HHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHc-CCeEE
Confidence 99853 2566677889999998873 789999988 56799999999999999999999999999999 99999
Q ss_pred EeCccCcccccCCC-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH----------------HHH--HhcCCC
Q psy12791 179 LDNTFLTAYYQKSL-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK----------------FLQ--NSMGVV 239 (393)
Q Consensus 179 vDea~~~~~~~~~~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~----------------~~~--~~~~~~ 239 (393)
+|++|+.+....++ ..++|+++.|+||+++++.| +||++++ +++++.++ ... ......
T Consensus 181 ~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (386)
T 2dr1_A 181 VDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPG--LAIGAFS-ERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPST 257 (386)
T ss_dssp EECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSS--CEEEEEC-HHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSC
T ss_pred EEccccccCccccccccCCcEEEEeccccccCCCc--eEEEEEC-HHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCC
Confidence 99999976543222 24789999999999964446 8999998 77777662 111 122334
Q ss_pred CCHHHHHHHHhccC------CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC
Q psy12791 240 PSPFDCWLVTRGLK------TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG 313 (393)
Q Consensus 240 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
.+...+..+...++ .+...+++..++.+.+.+.|+++ ++. +..+. . ...+.++++.++.
T Consensus 258 ~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~--~-----------~~~~~~~~~~~~~ 322 (386)
T 2dr1_A 258 PPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLD-ILAEP--G-----------HESPTITAVLTPP 322 (386)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCT--T-----------CBCSSEEEEECCT
T ss_pred CCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCe-eCcCc--c-----------ccCCceEEEEcCC
Confidence 45544443333332 24556777778888888888875 332 11111 0 0135788888842
Q ss_pred CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 314 GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 314 ~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
......+.+.|...++.+..|..+ ..++++|+|++...++++++.+.++|+++
T Consensus 323 -~~~~~~~~~~l~~~gi~v~~~~~~-----------------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 375 (386)
T 2dr1_A 323 -GIKGDEVYEAMRKRGFELAKGYGS-----------------------VKEKTFRIGHMGYMKFEDIQEMLDNLREV 375 (386)
T ss_dssp -TCCHHHHHHHHHHTTEECEECCGG-----------------------GTTTEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHCCeEEecCccc-----------------------cCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 122344555554435555544311 02579999999888888888888777654
No 78
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.97 E-value=2e-29 Score=239.92 Aligned_cols=285 Identities=16% Similarity=0.141 Sum_probs=200.3
Q ss_pred chHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----
Q psy12791 59 PTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---- 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---- 131 (393)
++..++|+++|+++|.+ +++++++|+++ + .++..++++||+|+++.|+|++ +...++..|.+++.++.+
T Consensus 74 ~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~ 149 (397)
T 2zyj_A 74 EGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMG----AIQAFRLQGPRFLTVPAGEEGP 149 (397)
T ss_dssp TCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHH----HHHHHHTTCCEEEEEEEETTEE
T ss_pred CCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHH----HHHHHHHcCCEEEecCcCCCCC
Confidence 46889999999999875 67888888775 7 6677778999999999999985 556677789999988764
Q ss_pred CHHHHHhhcCC-CCcEEE-EecCCCCcccccCHH---HHHHHHHhCCCcEEEEeCccCcccccC--CCC---C------c
Q psy12791 132 KIENLIKYIKP-NTKMVW-IENPTNPLMTVFDVK---AISAVVKQHPDILLVLDNTFLTAYYQK--SLP---W------G 195 (393)
Q Consensus 132 d~~~l~~~l~~-~~~~v~-l~~p~nptG~~~~~~---~l~~l~~~~~~~~livDea~~~~~~~~--~~~---~------~ 195 (393)
|++++++.+++ ++++|+ +++|+||||.++|.+ +|.++|+++ |+++|+||+|+.+.+.. +.. . +
T Consensus 150 d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (397)
T 2zyj_A 150 DLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMER-GLVVVEDDAYRELYFGEARLPSLFELAREAGYP 228 (397)
T ss_dssp CHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHH-TCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCC
T ss_pred CHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHc-CCEEEEeCCcccccCCCCCCCchhhhCcccCCC
Confidence 78999988875 788885 699999999999854 899999999 99999999999865421 111 1 3
Q ss_pred CcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC-----HHHHHHHHHHHHHHHH
Q psy12791 196 VDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT-----LPCRLKEHERGSIEVA 270 (393)
Q Consensus 196 ~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~ 270 (393)
.+++++|+||++ | +|+|+||++++ +++.+.++.....+....++..+..+...++. +....+++.++++.+.
T Consensus 229 ~~i~~~s~sK~~-~-~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 305 (397)
T 2zyj_A 229 GVIYLGSFSKVL-S-PGLRVAFAVAH-PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAML 305 (397)
T ss_dssp CEEEEEESTTTT-C-GGGCCEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecccccc-c-ccceeEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 449999999999 6 99999999997 88888887655443333356665555555543 3334455566777788
Q ss_pred HHHhh-CC-CcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCccccc
Q psy12791 271 KFLES-HP-CVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMT 348 (393)
Q Consensus 271 ~~l~~-~~-~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~ 348 (393)
+.|++ +| ++. +..|. .+.++++.++. ......+.+.+...++.+..|..+...
T Consensus 306 ~~L~~~~~~g~~-~~~~~----------------~g~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~f~~~------- 360 (397)
T 2zyj_A 306 HALDREVPKEVR-YTRPK----------------GGMFVWMELPK-GLSAEGLFRRALEENVAFVPGGPFFAN------- 360 (397)
T ss_dssp HHHHHHSCTTSE-ECCCS----------------BSSEEEEECST-TCCHHHHHHHHHHTTEEEEESGGGCTT-------
T ss_pred HHHHHHCCCCeE-EccCC----------------ccEEEEEEcCC-CCCHHHHHHHHHHCCCEEechHHhcCC-------
Confidence 88875 45 343 22222 24578888842 112334445444446666555433210
Q ss_pred CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 349 HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 349 ~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
+..++++|+|++.. ++++++.+.++|++
T Consensus 361 ------------~~~~~~iRis~~~~-~~~~i~~~~~~l~~ 388 (397)
T 2zyj_A 361 ------------GGGENTLRLSYATL-DREGIAEGVRRLGR 388 (397)
T ss_dssp ------------SCCTTEEEEECSSS-CHHHHHHHHHHHHH
T ss_pred ------------CCCCCeEEEEcCCC-CHHHHHHHHHHHHH
Confidence 01258999999986 55555555555543
No 79
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.97 E-value=2.5e-29 Score=241.31 Aligned_cols=287 Identities=11% Similarity=0.046 Sum_probs=195.9
Q ss_pred CchHHHHHHHHHHHhCCC-cEEEeccHHHH-HH---HHHHhcC--C---------CCeEEEcCCCccchHHHHHHhcccC
Q psy12791 58 NPTRRNLERCIASLEEAK-HGLCYSSGLGA-VT---AVTHLLS--A---------GDHIISGDDVYGGTYRYFAQVAPKI 121 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l~---~~~~~~~--~---------gd~vl~~~~~y~~~~~~~~~~~~~~ 121 (393)
.++..+||+++|++++.+ ++|++|+|+++ +. ++..++. + ||+|+++.|+|.+ +...++..
T Consensus 69 ~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~----~~~~~~~~ 144 (423)
T 3ez1_A 69 VAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDR----HFLLLQTL 144 (423)
T ss_dssp TTCCHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHH----HHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHH----HHHHHHHc
Confidence 356789999999999976 78888888775 54 4455667 7 5999999999985 56667788
Q ss_pred CcEEEeeCCC----CHHHHHhhc--CCCCcEEEE-ecCCCCcccccCHH---HHHHHH-HhCCCcEEEEeCccCcccccC
Q psy12791 122 GLEVDFVDLR----KIENLIKYI--KPNTKMVWI-ENPTNPLMTVFDVK---AISAVV-KQHPDILLVLDNTFLTAYYQK 190 (393)
Q Consensus 122 g~~v~~~~~~----d~~~l~~~l--~~~~~~v~l-~~p~nptG~~~~~~---~l~~l~-~~~~~~~livDea~~~~~~~~ 190 (393)
|++++.++.+ |++++++++ .+++++|++ ++||||||.+++.+ +|.++| +++ |+++|+||+|....+..
T Consensus 145 g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~-~~~li~De~y~~~~~~~ 223 (423)
T 3ez1_A 145 GFELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAP-DFTIFADDAYRVHHLVE 223 (423)
T ss_dssp TCEEEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSST-TCEEEEECTTSSCBCCS
T ss_pred CCEEEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhcc-CCEEEEECCcchhhcCC
Confidence 9999998875 899999998 567999986 48999999999966 777788 889 99999999999532211
Q ss_pred ----C-----------CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC-
Q psy12791 191 ----S-----------LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT- 254 (393)
Q Consensus 191 ----~-----------~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 254 (393)
+ ...+++++++||||++ .+|+|+||++++ +++++.++..........+...+..+...++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~--~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 300 (423)
T 3ez1_A 224 EDRAEPVNFVVLARDAGYPDRAFVFASTSKIT--FAGAGLGFVASS-EDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEY 300 (423)
T ss_dssp SSCCCCCCHHHHHHHHTCTTSEEEEEESTTTS--CSSSSCEEEEEC-HHHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHS
T ss_pred CCCCCCcchhhhhhccCCCCeEEEEeCchhhc--cCCcceEEEEeC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhc
Confidence 1 0235679999999984 679999999997 88999888777766666666665544333221
Q ss_pred -------HHHHHHHHHHHHHHHHHHHhh-CCCc---ceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHH
Q psy12791 255 -------LPCRLKEHERGSIEVAKFLES-HPCV---KGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLE 323 (393)
Q Consensus 255 -------~~~~~~~~~~~~~~l~~~l~~-~~~~---~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
+....+.+.++.+.+.+.|.+ ++.+ ..+..|. .+.++++.+++. ..+.+.+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~--~~~~~~~ 362 (423)
T 3ez1_A 301 PGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPK----------------GGYFISLDTAEP--VADRVVK 362 (423)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCS----------------BSSCEEEEESSS--CHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCC----------------ccEEEEEECCCC--cHHHHHH
Confidence 222233334455555555543 2221 1222222 246789999532 2344555
Q ss_pred hcCccccccccCC-ccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 324 SLLIFRCAESLGG-IESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 324 ~l~~~~~~~~~g~-~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
.+...++.+..++ .+.... +..++++|||++.. ++++++.+.+.|.+
T Consensus 363 ~l~~~gv~v~~~g~~~~~~~------------------~~~~~~iRis~~~~-~~~~i~~~~~~l~~ 410 (423)
T 3ez1_A 363 LAEAAGVSLTPAGATYPAGQ------------------DPHNRNLRLAPTRP-PVEEVRTAMQVVAA 410 (423)
T ss_dssp HHHHTTEECCCTTTTSSTTC------------------CSSSCEEEECCSSS-CHHHHHHHHHHHHH
T ss_pred HHHHCCcEEecCcccccCCC------------------CCCCCeEEEEcCCC-CHHHHHHHHHHHHH
Confidence 5555567776633 321100 01268999999876 44445554444443
No 80
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.97 E-value=1e-29 Score=243.36 Aligned_cols=307 Identities=14% Similarity=0.140 Sum_probs=201.8
Q ss_pred CCccCCeeeeCCCCCCCCCccccCCC-CchHHHHHHHHHHHhC------------CC-cEEEeccHHHH-H-HHHHHhcC
Q psy12791 32 PIILSTTFKQNTPGQPPQGFEYSRSN-NPTRRNLERCIASLEE------------AK-HGLCYSSGLGA-V-TAVTHLLS 95 (393)
Q Consensus 32 p~~~~~~~~~~~~~~~~~~~~y~~~~-~~~~~~lr~~la~~~~------------~~-~~i~~~~G~~a-l-~~~~~~~~ 95 (393)
.+.+++.+.+++.+.+... ....|+ ..+..++|+++|++++ .+ +.+++++|+++ + .++..+++
T Consensus 48 ~~~~~~~v~~a~~~~~~~~-~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~ 126 (416)
T 1bw0_A 48 NLLTSAAQIKKLKEAIDSQ-ECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICD 126 (416)
T ss_dssp CSCCCHHHHHHHHHHHHTT-CSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHHHHhhCC-ccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCC
Confidence 3555555555443321111 122333 3467899999999988 33 67777777665 7 66777889
Q ss_pred CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHH
Q psy12791 96 AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAI 165 (393)
Q Consensus 96 ~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l 165 (393)
+||+|+++.|+|++ +...++..|++++.++.+ |++++++.+.+++++|++++|+||||.++| +++|
T Consensus 127 ~gd~vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i 202 (416)
T 1bw0_A 127 AGDYALVPQPGFPH----YETVCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDI 202 (416)
T ss_dssp TTCEEEEEESCCTH----HHHHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred CCCEEEEcCCCcHh----HHHHHHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHH
Confidence 99999999999985 556678889999888752 789999999888999999999999999999 8999
Q ss_pred HHHHHhCCCcEEEEeCccCcccccC--------CCC----CcCcEEEEcccccccCCCCceEEEEEecCh-HHHHHH---
Q psy12791 166 SAVVKQHPDILLVLDNTFLTAYYQK--------SLP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDD-SLQARL--- 229 (393)
Q Consensus 166 ~~l~~~~~~~~livDea~~~~~~~~--------~~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~-~~~~~~--- 229 (393)
.++|+++ |+++|+||+|..+.+.. ++. .+.+++++|+||++ |.+|+|+||++++++ ++.+.+
T Consensus 203 ~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Glr~G~~~~~~~~~~~~~~~~~ 280 (416)
T 1bw0_A 203 VRLAEEL-RLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNL-VVPGWRLGWLLYVDPHGNGPSFLEG 280 (416)
T ss_dssp HHHHHHH-TCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTT-SCGGGCCEEEEEECTTCSCHHHHHH
T ss_pred HHHHHHc-CCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhC-CCCCceEEEEEeeCchhhHHHHHHH
Confidence 9999999 99999999999854321 111 12358899999999 689999999999754 333333
Q ss_pred -HHHHHhcCCCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCC
Q psy12791 230 -KFLQNSMGVVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGT 303 (393)
Q Consensus 230 -~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~ 303 (393)
+..... ....++..+..+...++ .+...+++..++.+.+.+.|+++|++. +..|. .
T Consensus 281 ~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~----------------~ 342 (416)
T 1bw0_A 281 LKRVGML-VCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLA-PTMPR----------------G 342 (416)
T ss_dssp HHHHHHH-HTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEE-ECCCC----------------B
T ss_pred HHHHhcc-ccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCC----------------e
Confidence 222211 22344555544444332 234456666777888888888766653 22222 1
Q ss_pred cceEEEEEcCC----HHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHH
Q psy12791 304 SGMLSFYVNGG----AEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTD 378 (393)
Q Consensus 304 ~~~~~~~~~~~----~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~ 378 (393)
+.++++.++.. ......+.+.+ +..++.+..|..+. .++++|+|++. +++
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~-----------------------~~~~iRis~~~--~~e 397 (416)
T 1bw0_A 343 AMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFH-----------------------APGFTRLTTTR--PVE 397 (416)
T ss_dssp TTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGT-----------------------CTTEEEEECCS--CHH
T ss_pred eEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccC-----------------------CCCeEEEEecC--CHH
Confidence 45678887410 01233444443 33455555544321 14799999973 344
Q ss_pred HHHHHHHHHH
Q psy12791 379 LIADLDQALR 388 (393)
Q Consensus 379 ~i~~l~~al~ 388 (393)
.++...+.|.
T Consensus 398 ~l~~~l~~l~ 407 (416)
T 1bw0_A 398 VYREAVERIK 407 (416)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 81
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.97 E-value=4.6e-30 Score=248.34 Aligned_cols=320 Identities=13% Similarity=0.126 Sum_probs=210.8
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCCC---CccccCC-CCchHHHHHHHHHHHh----CCC-cEEEeccHHHH-HHHH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPPQ---GFEYSRS-NNPTRRNLERCIASLE----EAK-HGLCYSSGLGA-VTAV 90 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~~---~~~y~~~-~~~~~~~lr~~la~~~----~~~-~~i~~~~G~~a-l~~~ 90 (393)
.+.+| +++.+++.+++.+.+++.+.+.. ......| +..+..+||+++|+++ +.+ ++|++++|+++ +.++
T Consensus 69 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~ 148 (449)
T 3qgu_A 69 AKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARI 148 (449)
T ss_dssp CCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH
T ss_pred CCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHH
Confidence 35677 77778777776666554332110 0112233 2356789999999998 544 78888888776 6444
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE----------EEeeCCCCHHHHHhhcC--CCCcEEEEecCCCCccc
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE----------VDFVDLRKIENLIKYIK--PNTKMVWIENPTNPLMT 158 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~----------v~~~~~~d~~~l~~~l~--~~~~~v~l~~p~nptG~ 158 (393)
..++++||+|++++|+|++ +...++..|.+ ++.++.++.+.+...+. +++++|++++||||||.
T Consensus 149 ~~l~~~gd~Vl~~~p~~~~----~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~ 224 (449)
T 3qgu_A 149 QMMFGSKPTVAVQDPSYPV----YVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGA 224 (449)
T ss_dssp HHHHCSSSCEEEEESCCTH----HHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCC
T ss_pred HHHhCCCCEEEEcCCCChh----HHHHHHHcCCcccccccccceeEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCC
Confidence 7788999999999999985 55666777877 88888753222221121 47899999999999999
Q ss_pred ccC---HHHHHHHHHhCCCcEEEEeCccCcccccC--C--C---C--CcCcEEEEcccccccCCCCceEEEEEecChHHH
Q psy12791 159 VFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK--S--L---P--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQ 226 (393)
Q Consensus 159 ~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~--~--~---~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~ 226 (393)
+++ +++|.++|+++ |+++|+||+|+.+.... + + . .++++++.|+||++ |++|+|+||++++ ++++
T Consensus 225 ~~~~~~l~~l~~l~~~~-~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~ 301 (449)
T 3qgu_A 225 AATRAQLTELVNFARKN-GSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYA-GFTGVRLGWTVVP-KALK 301 (449)
T ss_dssp CCCHHHHHHHHHHHHHH-TCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGG-TCTTCCCEEEECC-TTCB
T ss_pred cCCHHHHHHHHHHHHHC-CcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhc-CCccceeEEEecC-HHHH
Confidence 998 77788889999 99999999999865431 1 1 1 24579999999999 7999999999997 5544
Q ss_pred H--------HHHHHHHhcCCCCCHHHHHHHHhccCC-----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcch
Q psy12791 227 A--------RLKFLQNSMGVVPSPFDCWLVTRGLKT-----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNH 293 (393)
Q Consensus 227 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~ 293 (393)
+ .+...........++..+..+...++. +...++++.++.+.+.+.|++. ++. +..+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~------- 372 (449)
T 3qgu_A 302 YANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFS-VYGGD------- 372 (449)
T ss_dssp CTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-EEESS-------
T ss_pred hhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-eeCCC-------
Confidence 3 344444444445566666655555543 3445666677788888888765 333 22121
Q ss_pred HHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEec
Q psy12791 294 ELAKSQWSGTSGMLSFYVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVG 372 (393)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~ 372 (393)
.+.++++.+++ .....+.+.+. ..++.+..|..+.. ..+++||||+.
T Consensus 373 ---------~~~~~~~~~~~--~~~~~~~~~l~~~~gI~v~pg~~f~~---------------------~~~~~iRis~~ 420 (449)
T 3qgu_A 373 ---------DAPYIWVGFPG--KPSWDVFAEILERCNIVTTPGSGYGP---------------------AGEGFVRASAF 420 (449)
T ss_dssp ---------SSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCG---------------------GGTTEEEEECC
T ss_pred ---------CeeEEEEECCC--CCHHHHHHHHHHHCCEEEecchHhCC---------------------CCCCeEEEEec
Confidence 24678888842 11223333322 22555555544321 01589999964
Q ss_pred CCChHHHHHHHHHHHHHhh
Q psy12791 373 VEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 373 ~~~~~~~i~~l~~al~~~~ 391 (393)
. ++++++.+.++|+++.
T Consensus 421 ~--~~e~i~~~l~~l~~~~ 437 (449)
T 3qgu_A 421 G--SRENILEAVRRFKEAY 437 (449)
T ss_dssp S--CHHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHHH
Confidence 4 6666777777776654
No 82
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.97 E-value=2.9e-29 Score=241.03 Aligned_cols=285 Identities=16% Similarity=0.162 Sum_probs=197.5
Q ss_pred chHHHHHHHHHHHh----C---CC-cEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee
Q psy12791 59 PTRRNLERCIASLE----E---AK-HGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV 128 (393)
Q Consensus 59 ~~~~~lr~~la~~~----~---~~-~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~ 128 (393)
.+..++|+++|+++ | .+ +.|++++|+++ + .++.+++++||+|+++.|+|++ +...++..|++++.+
T Consensus 85 ~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~v 160 (425)
T 1vp4_A 85 EGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLG----AINAFRQYLANFVVV 160 (425)
T ss_dssp TCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHH----HHHHHHTTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHH----HHHHHHHcCCEEEEe
Confidence 46789999999998 8 43 68888888775 7 6777788999999999999985 566677889999988
Q ss_pred CCC----CHHHHHhhcCC--------CCcEEE-EecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC--
Q psy12791 129 DLR----KIENLIKYIKP--------NTKMVW-IENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK-- 190 (393)
Q Consensus 129 ~~~----d~~~l~~~l~~--------~~~~v~-l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~-- 190 (393)
+.+ |++++++.+++ ++++|+ +++|+||||.++| +++|.++|+++ |+++|+||+|+.+.+..
T Consensus 161 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~ 239 (425)
T 1vp4_A 161 PLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKY-DLFIVEDDPYGALRYEGET 239 (425)
T ss_dssp EEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEECSSTTCBCSSCC
T ss_pred ccCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHc-CCEEEEECCCccccCCCCC
Confidence 764 78889888865 688885 6899999999998 56888999999 99999999999865421
Q ss_pred CCC------CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC------HHHH
Q psy12791 191 SLP------WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT------LPCR 258 (393)
Q Consensus 191 ~~~------~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 258 (393)
+.. .+.+++++|+||++ | +|+|+||++++ +++++.+...........++..+..+...++. +...
T Consensus 240 ~~~~~~~~~~~~~i~~~s~sK~~-~-~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 316 (425)
T 1vp4_A 240 VDPIFKIGGPERVVLLNTFSKVL-A-PGLRIGMVAGS-KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPT 316 (425)
T ss_dssp CCCHHHHHCTTTEEEEEESTTTT-C-GGGCEEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHH
T ss_pred CcCHHHhCCCCCEEEEecccccc-c-cccceEEEeeC-HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHH
Confidence 111 24679999999999 7 99999999998 88888887655544334455555544444322 2334
Q ss_pred HHHHHHHHHHHHHHHhhC-C---CcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcccccccc
Q psy12791 259 LKEHERGSIEVAKFLESH-P---CVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESL 334 (393)
Q Consensus 259 ~~~~~~~~~~l~~~l~~~-~---~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 334 (393)
++++.++++.+.+.|++. + ++. +..|. .+.++++.++.. .....+.+.+...++.+..
T Consensus 317 ~~~~~~~~~~l~~~L~~~~~~~~g~~-~~~~~----------------~g~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~ 378 (425)
T 1vp4_A 317 IELYRRKRTVMLNALEEYFSDIPGVK-WVKSE----------------GGLFIWLTLPEG-FDTWEMFEYAKRKKVFYVP 378 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSTTCE-ECCCS----------------BSSEEEEECCTT-CCTTTTHHHHHHHTEECEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCceE-EecCC----------------ccEEEEEEcCCC-CCHHHHHHHHHHCCCEEEC
Confidence 455566777888888763 4 232 22222 245788888521 1122333333333555555
Q ss_pred CCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 335 GGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 335 g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
|..+... +..++++|||++.. ++++++.+.++|++
T Consensus 379 g~~f~~~-------------------~~~~~~iRis~~~~-~~e~i~~~l~~l~~ 413 (425)
T 1vp4_A 379 GRVFKVY-------------------DEPSPSMRLSFCLP-PDEKIVEGIKRLRE 413 (425)
T ss_dssp GGGGCTT-------------------CCCCSEEEEECSSS-CHHHHHHHHHHHHH
T ss_pred chhhcCC-------------------CCCCCeEEEEeCCC-CHHHHHHHHHHHHH
Confidence 4433210 01257999999975 45555555555543
No 83
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.97 E-value=2.8e-29 Score=239.20 Aligned_cols=295 Identities=16% Similarity=0.177 Sum_probs=209.4
Q ss_pred CchHHHHHHHHHHHhCC--CcEEEeccHH-HHH-HHHHHh----cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC
Q psy12791 58 NPTRRNLERCIASLEEA--KHGLCYSSGL-GAV-TAVTHL----LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD 129 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~--~~~i~~~~G~-~al-~~~~~~----~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~ 129 (393)
.+...++|+++|++++. ++.+++++|+ +++ .++..+ +++||+|++++|+|++++..+...++..|++++.++
T Consensus 66 ~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 145 (406)
T 1kmj_A 66 TEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIP 145 (406)
T ss_dssp HHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEe
Confidence 46678999999999998 3666666665 557 667777 789999999999999877677777788899999998
Q ss_pred CC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEcc
Q psy12791 130 LR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSL 203 (393)
Q Consensus 130 ~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~ 203 (393)
.+ |++++++.+.+++++|++++|+||||.++|+++|.++|+++ |+++|+|++|+.+...... ..++|+++.|+
T Consensus 146 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~ 224 (406)
T 1kmj_A 146 LNPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQH-GAKVLVDGAQAVMHHPVDVQALDCDFYVFSG 224 (406)
T ss_dssp BCTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHT-TCEEEEECTTTTTTSCCCHHHHTCSEEEEEG
T ss_pred cCCCCCcCHHHHHHHhccCCeEEEEeCCCccccCcCCHHHHHHHHHHc-CCEEEEEchhhcCCCCCcccccCCCEEEEEc
Confidence 74 78999999988899999999999999999999999999999 9999999999875431111 13689999999
Q ss_pred cccccCCCCceEEEEEecChHHHHHHHHHHHh---------------------c-CCCCCHHHHHHHHhccC-----CHH
Q psy12791 204 TKYMNGHSDVVMGATVTNDDSLQARLKFLQNS---------------------M-GVVPSPFDCWLVTRGLK-----TLP 256 (393)
Q Consensus 204 sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~---------------------~-~~~~~~~~~~~~~~~~~-----~~~ 256 (393)
||.+ |++| +||++++ +++++.++..... + .+.........+...++ .+.
T Consensus 225 ~K~~-g~~G--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 300 (406)
T 1kmj_A 225 HKLY-GPTG--IGILYVK-EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLN 300 (406)
T ss_dssp GGTT-SCTT--CEEEEEC-HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHH
T ss_pred hhcc-CCCC--cEEEEEe-HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHH
Confidence 9999 7888 8999997 8887776432210 1 11222222221112222 234
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC-CHHHHHHHHHhcCccccccccC
Q psy12791 257 CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG-GAEETRIFLESLLIFRCAESLG 335 (393)
Q Consensus 257 ~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~g 335 (393)
...++..++.+.+.+.|++++++. +..+. ..++++.+.+++ +. ..+.+.+...++.+..|
T Consensus 301 ~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~~~~~~~~~~~---~~~~~~l~~~gi~v~~g 361 (406)
T 1kmj_A 301 NIAEYEQNLMHYALSQLESVPDLT-LYGPQ---------------NRLGVIAFNLGKHHA---YDVGSFLDNYGIAVRTG 361 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTEE-EESCT---------------TCCSEEEEEETTCCH---HHHHHHHHHTTEECEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeE-EecCC---------------CcCCEEEEEECCCCH---HHHHHHHhhCCcEEEec
Confidence 455666677888888888776654 22221 025777788843 22 33444444445655555
Q ss_pred CccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 336 GIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 336 ~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..++.. .....|. ++++|||++..+++++++.+.++|+++.
T Consensus 362 ~~~~~~--------------~~~~~g~-~~~iRis~~~~~t~~~i~~~~~~l~~~~ 402 (406)
T 1kmj_A 362 HHCAMP--------------LMAYYNV-PAMCRASLAMYNTHEEVDRLVTGLQRIH 402 (406)
T ss_dssp CTTCHH--------------HHHHTTC-SCEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred cccchH--------------HHHhcCC-CCeEEEEeecCCCHHHHHHHHHHHHHHH
Confidence 432210 0000111 5899999999999999999999988764
No 84
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.97 E-value=6.3e-29 Score=234.97 Aligned_cols=315 Identities=13% Similarity=0.079 Sum_probs=216.2
Q ss_pred CCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC---cEEEeccHHH-HHHHHHHhcCCCCeEEEcC
Q psy12791 29 VIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK---HGLCYSSGLG-AVTAVTHLLSAGDHIISGD 104 (393)
Q Consensus 29 ~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~---~~i~~~~G~~-al~~~~~~~~~gd~vl~~~ 104 (393)
+..|..+++.+.+++.+.+.. .+.....+...++++.+++++|.+ +.+++++|++ ++.++..++++||+|++++
T Consensus 7 ~~gp~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~gd~vi~~~ 84 (384)
T 3zrp_A 7 HVGPTTIKEDVLVAGLENNVG--FTSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAMESVTSLLKPNDKILVVS 84 (384)
T ss_dssp CSSCSCCCHHHHHHTTCCSCC--TTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHHHGGGGCCTTCEEEEEC
T ss_pred cCCCCCCCHHHHHHhhccccc--cccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHHHHHhhcCCCCEEEEec
Confidence 456666677777776654321 122112456788999999999976 4566666655 5565556789999999999
Q ss_pred CCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEE
Q psy12791 105 DVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLV 178 (393)
Q Consensus 105 ~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~li 178 (393)
++|++. .+...++..|++++.++.+ |++++++.+.+ ++++|++++|+||||.++|+++|.++|+++ |+++|
T Consensus 85 ~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~li 161 (384)
T 3zrp_A 85 NGVFGD--RWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKY-VELIV 161 (384)
T ss_dssp SSHHHH--HHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGG-EEEEE
T ss_pred CCcchH--HHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhc-CCEEE
Confidence 999753 3556678899999999886 89999999987 799999999999999999999999999999 99999
Q ss_pred EeCccCcccccCCC-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHH-------------HHHHHhc--------
Q psy12791 179 LDNTFLTAYYQKSL-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARL-------------KFLQNSM-------- 236 (393)
Q Consensus 179 vDea~~~~~~~~~~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~-------------~~~~~~~-------- 236 (393)
+|++|+.+...... ..++|+++.|+||+++|++| +||++++ +++++.+ .......
T Consensus 162 ~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (384)
T 3zrp_A 162 VDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAG--LGLLLLS-PKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKA 238 (384)
T ss_dssp EECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSS--EEEEEEC-HHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCC
T ss_pred EECcccccCccccccccCCCEEEecCcccccCCCc--eEEEEEC-HHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCC
Confidence 99999865543222 24789999999999877777 9999997 7777666 2222110
Q ss_pred --CCCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEE
Q psy12791 237 --GVVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSF 309 (393)
Q Consensus 237 --~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
.+..+......+...++ .+....++..++.+.+.+.|+++ ++. +..+. . ....+.+++|
T Consensus 239 ~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----~--------~~~~~~~~~~ 304 (384)
T 3zrp_A 239 AYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLE-IVARR----P--------ESYSNTVTGV 304 (384)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSCSS----G--------GGBCSSEEEE
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCe-EccCc----c--------cccCccEEEE
Confidence 01333333322222222 24456666777788888888876 332 11110 0 0112467788
Q ss_pred EEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 310 YVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
.+++ .....+.+.+...++.+..|..+ + .+++|++++..+++++++.+.++|++
T Consensus 305 ~~~~--~~~~~~~~~l~~~gi~v~~g~~~-----~-------------------~~~iRi~~~~~~~~e~i~~~~~~l~~ 358 (384)
T 3zrp_A 305 ILKV--ADPQKVLAGTVNEGVEFAPGVHP-----A-------------------FKYFRIGHMGWVTPNDAIIAISVIER 358 (384)
T ss_dssp ECSS--SCHHHHHHHHHTTTCCCEECCCT-----T-------------------CCEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred ECCC--CCHHHHHHHHHHCCEEEecCCCC-----C-------------------cCEEEEeccccCCHHHHHHHHHHHHH
Confidence 8853 33445555554445555443210 0 17899999988888888888888876
Q ss_pred hh
Q psy12791 390 AC 391 (393)
Q Consensus 390 ~~ 391 (393)
+.
T Consensus 359 ~l 360 (384)
T 3zrp_A 359 TL 360 (384)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 85
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.97 E-value=4.6e-29 Score=244.13 Aligned_cols=217 Identities=15% Similarity=0.134 Sum_probs=162.1
Q ss_pred CchHHHHHHHHHHHhC------C-CcEEEeccHHHH-H-HHHHHhc-CCCCeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 58 NPTRRNLERCIASLEE------A-KHGLCYSSGLGA-V-TAVTHLL-SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~------~-~~~i~~~~G~~a-l-~~~~~~~-~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
..+..++|+++|++++ . ++.|++|+|+++ + .++..++ ++||.|+++.|+|.. +...++..|++++.
T Consensus 133 ~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~ 208 (500)
T 3tcm_A 133 SQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPL----YSASIALHGGALVP 208 (500)
T ss_dssp TTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTH----HHHHHHHTTCEEEE
T ss_pred CcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHh----HHHHHHHcCCEEEE
Confidence 3567889999999863 3 367777777665 7 6666777 799999999999984 66777888999999
Q ss_pred eCCC-------CHHHHHhhcCC------CCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC-
Q psy12791 128 VDLR-------KIENLIKYIKP------NTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK- 190 (393)
Q Consensus 128 ~~~~-------d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~- 190 (393)
++++ |++++++.+.+ ++++|++++|+||||.+++ +++|.++|+++ ++++|+||+|..+.+..
T Consensus 209 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~-~~~li~Deay~~~~~~~~ 287 (500)
T 3tcm_A 209 YYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNE-GLVLLADEVYQENIYVDN 287 (500)
T ss_dssp EECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBCCTT
T ss_pred EecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHc-CCEEEEecCccccccCCC
Confidence 8853 78999998875 6899999999999999998 55667779999 99999999999865521
Q ss_pred -CC-C-------C------cCcEEEEcccccccCCCCceEEEEEec--ChHHHHHHHHHHHhcCCCCCHHHHHHHHhccC
Q psy12791 191 -SL-P-------W------GVDIVLYSLTKYMNGHSDVVMGATVTN--DDSLQARLKFLQNSMGVVPSPFDCWLVTRGLK 253 (393)
Q Consensus 191 -~~-~-------~------~~di~~~S~sK~~~G~~G~r~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (393)
+. . . ...++++|+||.+.|++|+|+||+++. ++++++.+...... ..+.+...+..+...++
T Consensus 288 ~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~~~~~l~ 366 (500)
T 3tcm_A 288 KKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASV-NLCSNITGQILASLVMN 366 (500)
T ss_dssp CCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHT-TCCCCHHHHHHHHHHHS
T ss_pred CCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhc-ccCCCHHHHHHHHHHhc
Confidence 11 1 1 124888999999866999999999982 37888888766543 33444544444433332
Q ss_pred --------------CHHHHHHHHHHHHHHHHHHHhhCCCcc
Q psy12791 254 --------------TLPCRLKEHERGSIEVAKFLESHPCVK 280 (393)
Q Consensus 254 --------------~~~~~~~~~~~~~~~l~~~l~~~~~~~ 280 (393)
.....++++.++++.+.+.|++++++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~ 407 (500)
T 3tcm_A 367 PPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGIT 407 (500)
T ss_dssp CCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred CccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 233345566777888889998876654
No 86
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.97 E-value=5.4e-29 Score=238.39 Aligned_cols=300 Identities=15% Similarity=0.119 Sum_probs=209.9
Q ss_pred CchHHHHHHHHHHHhCC-C-cEEEeccH-HHHH-HHHHHh----cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC
Q psy12791 58 NPTRRNLERCIASLEEA-K-HGLCYSSG-LGAV-TAVTHL----LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD 129 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~-~-~~i~~~~G-~~al-~~~~~~----~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~ 129 (393)
.+...++|+++|++++. + +.+++++| ++++ .++..+ +++||+|++++|+|+++...+...++..|++++.++
T Consensus 71 ~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~ 150 (420)
T 1t3i_A 71 TDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQ 150 (420)
T ss_dssp HHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEec
Confidence 35678999999999998 3 45555554 5567 677777 789999999999999865556666777899999998
Q ss_pred CC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEcc
Q psy12791 130 LR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSL 203 (393)
Q Consensus 130 ~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~ 203 (393)
.+ |++++++++++++++|++++|+||||.++|+++|.++|+++ |+++|+|++|+.+...... ..++|+++.|+
T Consensus 151 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 229 (420)
T 1t3i_A 151 LDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQA-GAKVLVDACQSAPHYPLDVQLIDCDWLVASG 229 (420)
T ss_dssp BCTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHT-TCEEEEECTTTTTTSCCCHHHHTCSEEEEEG
T ss_pred cCCCCCcCHHHHHHhhCCCceEEEEeCCcccccCcCCHHHHHHHHHHc-CCEEEEEhhhccCCccCchhhcCCCEEEEeh
Confidence 73 79999999998899999999999999999999999999999 9999999999976432111 23689999999
Q ss_pred cccccCCCCceEEEEEecChHHHHHHHHHHHh--------------------cCCCCCHHHHHHHHh-ccC-----CHHH
Q psy12791 204 TKYMNGHSDVVMGATVTNDDSLQARLKFLQNS--------------------MGVVPSPFDCWLVTR-GLK-----TLPC 257 (393)
Q Consensus 204 sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~-~~~-----~~~~ 257 (393)
||.+ |++| +||++++ +++.+.++..... +....++..+.++.. .++ .+..
T Consensus 230 sK~~-~~~g--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~ 305 (420)
T 1t3i_A 230 HKMC-APTG--IGFLYGK-EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMEN 305 (420)
T ss_dssp GGTT-SCTT--CEEEEEC-HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred hhhc-CCCc--eEEEEEc-hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHH
Confidence 9987 6888 9999997 7887766432211 111122233322221 222 2445
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCc
Q psy12791 258 RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGI 337 (393)
Q Consensus 258 ~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~ 337 (393)
..++..++.+.+.+.|++++++. +..+... ..+.++++.+.+++ .....+.+.+...++.+..|..
T Consensus 306 ~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~~-----------~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~~~~ 371 (420)
T 1t3i_A 306 IHNYEVELTHYLWQGLGQIPQLR-LYGPNPK-----------HGDRAALASFNVAG--LHASDVATMVDQDGIAIRSGHH 371 (420)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEE-EESCCGG-----------GSCBCSEEEEEETT--BCHHHHHHHHHTTTEECBCSCT
T ss_pred HHHHHHHHHHHHHHHHHhCCCeE-EeCCCcc-----------ccccCCEEEEEECC--CCHHHHHHHHHHCCeEEeeccc
Confidence 56677778888899998876654 2222100 00235788888853 1233455555555666666543
Q ss_pred cccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 338 ESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 338 ~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
++.. .....|. ++++|+|++..+++++++.+.++|+++.
T Consensus 372 ~~~~--------------~~~~~g~-~~~iRis~~~~~~~~~i~~~~~~l~~~~ 410 (420)
T 1t3i_A 372 CTQP--------------LHRLFDA-SGSARASLYFYNTKEEIDLFLQSLQATI 410 (420)
T ss_dssp TCHH--------------HHHHTTC-CCCEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred cchH--------------HHHhcCC-CCeEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 3210 0001111 5799999999889888998888887654
No 87
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.96 E-value=1e-28 Score=235.80 Aligned_cols=285 Identities=18% Similarity=0.225 Sum_probs=197.7
Q ss_pred chHHHHHHHHHHHh----CC---CcEEEeccHHH-HH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC
Q psy12791 59 PTRRNLERCIASLE----EA---KHGLCYSSGLG-AV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD 129 (393)
Q Consensus 59 ~~~~~lr~~la~~~----~~---~~~i~~~~G~~-al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~ 129 (393)
.+..++|+++|+++ |. ++.+++++|++ ++ .++..++++||+|+++.|+|++ +...++..|++++.++
T Consensus 75 ~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~v~ 150 (407)
T 2zc0_A 75 NGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYIN----TLLAFEQLGAKIEGVP 150 (407)
T ss_dssp TCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHH----HHHHHHTTTCEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHH----HHHHHHHcCCEEEEcc
Confidence 46789999999998 73 36777878765 57 6777778899999999999985 5566778899999887
Q ss_pred CC----CHHHHHhhcC----C--CCcEEE-EecCCCCcccccCHH---HHHHHHHhCCCcEEEEeCccCccccc-CC---
Q psy12791 130 LR----KIENLIKYIK----P--NTKMVW-IENPTNPLMTVFDVK---AISAVVKQHPDILLVLDNTFLTAYYQ-KS--- 191 (393)
Q Consensus 130 ~~----d~~~l~~~l~----~--~~~~v~-l~~p~nptG~~~~~~---~l~~l~~~~~~~~livDea~~~~~~~-~~--- 191 (393)
.+ |++++++.+. + ++++|+ +++|+||||.++|.+ +|.++|+++ |+++|+||+|+.+.+. .+
T Consensus 151 ~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~ 229 (407)
T 2zc0_A 151 VDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKY-DLLIIEDTAYNFMRYEGGDIVP 229 (407)
T ss_dssp EETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTSBSSCSSCCC
T ss_pred cCCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEECCCcccccCCCCCCC
Confidence 74 7899998887 5 788875 689999999999976 999999999 9999999999986542 11
Q ss_pred C-C---CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCC-------HHHHHH
Q psy12791 192 L-P---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKT-------LPCRLK 260 (393)
Q Consensus 192 ~-~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 260 (393)
+ . .+.+++++|+||++ | +|+|+||++++ +++.+.++.....+....++..+..+...++. +....+
T Consensus 230 ~~~~~~~~~~i~~~s~sK~~-~-~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 306 (407)
T 2zc0_A 230 LKALDNEGRVIVAGTLSKVL-G-TGFRIGWIIAE-GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALL 306 (407)
T ss_dssp GGGGCSSCCEEEEEESTTTT-C-TTSCCEEEECC-HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHH
T ss_pred hhhcCCCCCEEEEccccccc-C-CCcceEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 1 1 14568999999999 6 89999999997 88888887766554444455555444333322 223445
Q ss_pred HHHHHHHHHHHHHhh-CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc-ccccccCCcc
Q psy12791 261 EHERGSIEVAKFLES-HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF-RCAESLGGIE 338 (393)
Q Consensus 261 ~~~~~~~~l~~~l~~-~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~g~~~ 338 (393)
+..++.+.+.+.|++ .+++. +..|. .+.++++.++. ......+.+.+... ++.+..|..+
T Consensus 307 ~~~~~~~~l~~~L~~~~~~~~-~~~~~----------------~~~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~~ 368 (407)
T 2zc0_A 307 GYKEKRDIMLKALENHLPNAE-FTKPI----------------AGMFVMFFLPE-GADGISFANELMEREGVVVVPGKPF 368 (407)
T ss_dssp HHHHHHHHHHHHHHHHCTTSC-BCCCS----------------BSSEEEEECST-TCCHHHHHHHHHHHTCEECBCSGGG
T ss_pred HHHHHHHHHHHHHHHhCCCCE-EecCC----------------CcEEEEEEcCC-CCCHHHHHHHHHHhCCeEEECchhc
Confidence 556667777888865 34432 11122 24578888842 11233455555443 5666655433
Q ss_pred ccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 339 SLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 339 s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
... +..++++|+|++.. ++++++.+.++|++
T Consensus 369 ~~~-------------------~~~~~~iRis~~~~-~~~~i~~~~~~l~~ 399 (407)
T 2zc0_A 369 YTD-------------------ESGKNAIRLNFSRP-SKEEIPIGIKKLAK 399 (407)
T ss_dssp CSS-------------------SCCTTEEEEECSSS-CTTHHHHHHHHHHH
T ss_pred cCC-------------------CCCCCeEEEEeCCC-CHHHHHHHHHHHHH
Confidence 210 01258999999976 45555555555543
No 88
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.96 E-value=1.6e-28 Score=236.58 Aligned_cols=284 Identities=17% Similarity=0.181 Sum_probs=194.1
Q ss_pred chHHHHHHHHHHHhC--------C-CcEEEeccHHH-HH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcc-cCCcEEE
Q psy12791 59 PTRRNLERCIASLEE--------A-KHGLCYSSGLG-AV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAP-KIGLEVD 126 (393)
Q Consensus 59 ~~~~~lr~~la~~~~--------~-~~~i~~~~G~~-al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~-~~g~~v~ 126 (393)
.+..+||+++|++++ . ++.+++++|.+ ++ .++..++++||.|+++.|+|.+ +...+. ..|.+++
T Consensus 86 ~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~----~~~~~~~~~g~~~~ 161 (435)
T 3piu_A 86 HGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPG----FDRDLKWRTGVEIV 161 (435)
T ss_dssp TCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTT----HHHHTTTTTCCEEE
T ss_pred CCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCcccc----HHHHHHHhcCCEEE
Confidence 456899999999987 3 35667766665 57 7777888999999999999986 444455 7899999
Q ss_pred eeCCC-------CHHHHHhhcCC------CCcEEEEecCCCCcccccCH---HHHHHHHHhCCCcEEEEeCccCcccccC
Q psy12791 127 FVDLR-------KIENLIKYIKP------NTKMVWIENPTNPLMTVFDV---KAISAVVKQHPDILLVLDNTFLTAYYQK 190 (393)
Q Consensus 127 ~~~~~-------d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~---~~l~~l~~~~~~~~livDea~~~~~~~~ 190 (393)
.++.+ |++++++.+.+ ++++|++++|+||||.+++. ++|.++|+++ |+++|+||+|+.+.+..
T Consensus 162 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~Dea~~~~~~~~ 240 (435)
T 3piu_A 162 PIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDK-GIHLISDEIYSGTAFSS 240 (435)
T ss_dssp EEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTGGGCCSS
T ss_pred EeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHc-CCEEEEeccccccccCC
Confidence 98874 78899988864 78999999999999999984 7788889999 99999999998754321
Q ss_pred C--CC----------------CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhcc
Q psy12791 191 S--LP----------------WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGL 252 (393)
Q Consensus 191 ~--~~----------------~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (393)
. .. .+.++++.|+||.+ |++|+|+||++++++.+.+.++.....+ ..++..+..+...+
T Consensus 241 ~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l 317 (435)
T 3piu_A 241 PSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL-GLPGFRVGAIYSNDDMVVAAATKMSSFG--LVSSQTQHLLSAML 317 (435)
T ss_dssp SCCCCHHHHHHC-------CGGGGEEEEEESSSSS-CCGGGCEEEEEESCHHHHHHHHHHGGGS--CCCHHHHHHHHHHH
T ss_pred CCCcCHHHhccccccccccCCCCCEEEEEeeeccc-CCCceeEEEEEeCCHHHHHHHHHHhhcC--CCCHHHHHHHHHHh
Confidence 1 11 23348999999999 7999999999997678888776554433 23444443333333
Q ss_pred CC-------HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-----HHHHHH
Q psy12791 253 KT-------LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-----AEETRI 320 (393)
Q Consensus 253 ~~-------~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 320 (393)
+. +...++++.++.+.+.+.|++. ++. +..+. .+.++++.++.. .+....
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~g~~~~~~l~~~~~~~~~~~~~~ 379 (435)
T 3piu_A 318 SDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GIS-CLNGN----------------AGLFCWVDMRHLLRSNTFEAEME 379 (435)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCE-ECCCC----------------SSSEEEEECGGGSSSSSHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc-ccCCC----------------eeEEEEEEcccccccCCchhHHH
Confidence 22 2334455566677777888765 332 21111 135788888521 113444
Q ss_pred HHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 321 FLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 321 ~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+.+.+ +..++.+..|..+.. ..++++||+++.. ++++++.+.+.|+++
T Consensus 380 ~~~~l~~~~gi~v~~g~~~~~---------------------~~~~~iRi~~~~~-~~e~i~~~l~~l~~~ 428 (435)
T 3piu_A 380 LWKKIVYEVHLNISPGSSCHC---------------------TEPGWFRVCFANL-PERTLDLAMQRLKAF 428 (435)
T ss_dssp HHHHHHHTSCEECEEGGGGTC---------------------SSTTEEEEECSSS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEeCCcccCC---------------------CCCCEEEEEeeCC-CHHHHHHHHHHHHHH
Confidence 55544 333566655544321 1268999999765 555555555555443
No 89
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.96 E-value=1.8e-28 Score=239.57 Aligned_cols=217 Identities=13% Similarity=0.151 Sum_probs=164.8
Q ss_pred CchHHHHHHHHHHHh-----CC---CcEEEeccHHHH-H-HHHHHhcCCCC----eEEEcCCCccchHHHHHHhcccCCc
Q psy12791 58 NPTRRNLERCIASLE-----EA---KHGLCYSSGLGA-V-TAVTHLLSAGD----HIISGDDVYGGTYRYFAQVAPKIGL 123 (393)
Q Consensus 58 ~~~~~~lr~~la~~~-----~~---~~~i~~~~G~~a-l-~~~~~~~~~gd----~vl~~~~~y~~~~~~~~~~~~~~g~ 123 (393)
..+..++|+++|+++ |. ++.|++|+|+++ + .++..++++|| .|+++.|+|+. +...++..|+
T Consensus 128 ~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~----~~~~~~~~g~ 203 (498)
T 3ihj_A 128 SQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPL----YSAVISELDA 203 (498)
T ss_dssp CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTH----HHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchh----HHHHHHHcCC
Confidence 356778999999876 44 367888888776 7 66677888875 99999999984 6777788899
Q ss_pred EEEeeCCC-------CHHHHHhhcCC-----CCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccc
Q psy12791 124 EVDFVDLR-------KIENLIKYIKP-----NTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYY 188 (393)
Q Consensus 124 ~v~~~~~~-------d~~~l~~~l~~-----~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~ 188 (393)
+++.++++ |++++++.+.+ ++++|++++||||||.+++ +++|.++|+++ +++||+||+|..+.+
T Consensus 204 ~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~-~~~li~De~y~~~~~ 282 (498)
T 3ihj_A 204 IQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEE-KLFLLADEVYQDNVY 282 (498)
T ss_dssp EEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTTTCBC
T ss_pred EEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHc-CcEEEEEcCcccccc
Confidence 99999876 78999998865 5899999999999999998 66788999999 999999999998765
Q ss_pred cCC---CCC--------------cCcEEEEcccccccCCCCceEEEEEe--cChHHHHHHHHHHHhcCCCCCHHHHHHHH
Q psy12791 189 QKS---LPW--------------GVDIVLYSLTKYMNGHSDVVMGATVT--NDDSLQARLKFLQNSMGVVPSPFDCWLVT 249 (393)
Q Consensus 189 ~~~---~~~--------------~~di~~~S~sK~~~G~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (393)
... ... ...++++|+||.++|++|+|+||++. .++++++.+....... .+.+...+..+.
T Consensus 283 ~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~q~a~~ 361 (498)
T 3ihj_A 283 SPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVR-LCPPVSGQAAMD 361 (498)
T ss_dssp CTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHS-CCCCHHHHHHHH
T ss_pred CCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhcc-CCCCHHHHHHHH
Confidence 321 110 12478999999997799999999984 3488988887665533 344444444444
Q ss_pred hccCC--------------HHHHHHHHHHHHHHHHHHHhhCCCcc
Q psy12791 250 RGLKT--------------LPCRLKEHERGSIEVAKFLESHPCVK 280 (393)
Q Consensus 250 ~~~~~--------------~~~~~~~~~~~~~~l~~~l~~~~~~~ 280 (393)
..++. ....++++.++++.+.+.|+++|++.
T Consensus 362 ~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~ 406 (498)
T 3ihj_A 362 IVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIH 406 (498)
T ss_dssp HHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred HHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE
Confidence 44431 22345666778888999998877654
No 90
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.96 E-value=4.9e-29 Score=238.45 Aligned_cols=303 Identities=11% Similarity=0.050 Sum_probs=202.4
Q ss_pred CCccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHHh-CC--Cc---EEEeccHHHH-H-HHHHHhcCCCCeEEE
Q psy12791 32 PIILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASLE-EA--KH---GLCYSSGLGA-V-TAVTHLLSAGDHIIS 102 (393)
Q Consensus 32 p~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~~-~~--~~---~i~~~~G~~a-l-~~~~~~~~~gd~vl~ 102 (393)
++.+++.+.+++.+. .. .....| +..+..++|+++++++ +. ++ .+++++|+++ + .++..++++||+|++
T Consensus 53 ~~~~~~~v~~a~~~~-~~-~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~ 130 (413)
T 3t18_A 53 KIIALPSVYDRLDEM-DR-SHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSYLDEGDPLIC 130 (413)
T ss_dssp CBCCCHHHHHHHHHS-CH-HHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHCCSSCEEEE
T ss_pred CcCChHHHHHHHHhc-Cc-ccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHHHHhcCCCCEEEE
Confidence 555555555544322 11 112223 3457788999999965 21 23 7777777665 7 777788999999999
Q ss_pred cCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCC----CCc-EEEEecC-CCCcccccCHHHHH---H
Q psy12791 103 GDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKP----NTK-MVWIENP-TNPLMTVFDVKAIS---A 167 (393)
Q Consensus 103 ~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~----~~~-~v~l~~p-~nptG~~~~~~~l~---~ 167 (393)
+.|+|.+ +...++..|.+++.++.. |++++++.+.+ +++ ++++++| |||||.++|.+++. +
T Consensus 131 ~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~ 206 (413)
T 3t18_A 131 HDYYWAP----YRKICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVIT 206 (413)
T ss_dssp ESSCCTH----HHHHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred CCCCccc----HHHHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 9999984 666778889999999862 78899888865 677 7888999 99999999966555 5
Q ss_pred HHH------hCCCcEEEEeCccCcccccCC----C-C----CcC---cEEEEcccccccCCCCceEEEEEec--ChHHHH
Q psy12791 168 VVK------QHPDILLVLDNTFLTAYYQKS----L-P----WGV---DIVLYSLTKYMNGHSDVVMGATVTN--DDSLQA 227 (393)
Q Consensus 168 l~~------~~~~~~livDea~~~~~~~~~----~-~----~~~---di~~~S~sK~~~G~~G~r~G~~~~~--~~~~~~ 227 (393)
+|+ ++ |+++|+||+|.++.+... + . .+. .++++|+||.+ |++|+|+||+++. ++++++
T Consensus 207 ~~~~~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~riG~~~~~~~~~~~~~ 284 (413)
T 3t18_A 207 FLKEKAEDKDK-KITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSH-TAYGLRSGAAVGISSSKEIIE 284 (413)
T ss_dssp HHHHHTTSTTC-EEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHT-TCGGGCCEEEEEEESCHHHHH
T ss_pred HHHHHhhccCC-cEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccC-CCcCcCcEEEEEecCCHHHHH
Confidence 555 89 999999999987554211 1 1 111 28889999999 6999999999982 388888
Q ss_pred HHHHHHHhc----CCCCCHHHHHHHHhccCCH---------HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchH
Q psy12791 228 RLKFLQNSM----GVVPSPFDCWLVTRGLKTL---------PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHE 294 (393)
Q Consensus 228 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~ 294 (393)
.+....... ....+...+..+...++.. ...++.+.++.+.+.+.|++. ++. +..+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~~-------- 354 (413)
T 3t18_A 285 EFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN-KLT-MIPYF-------- 354 (413)
T ss_dssp HHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-CBCCC--------
T ss_pred HHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC-ccCCC--------
Confidence 887654321 1335556655555555432 123444556667777778765 322 11111
Q ss_pred HHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC
Q psy12791 295 LAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE 374 (393)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~ 374 (393)
.+.++++.+. +..+.. +.+...++.+..| ++++|||++..
T Consensus 355 --------~~~~~~~~~~-~~~~~~---~~l~~~gv~v~~g----------------------------~~~iRis~~~~ 394 (413)
T 3t18_A 355 --------GGFFTFIPTD-KAFDIV---KDLEKENIFTIPS----------------------------AKGIRVAICGV 394 (413)
T ss_dssp --------SSSCEEEECS-CHHHHH---HHHHHTTEECEEC----------------------------SSEEEECTTTS
T ss_pred --------ceEEEEeCCC-CHHHHH---HHHHhCCEEEecC----------------------------CCceEEEEeeC
Confidence 1234676663 333333 3333334444332 47899999987
Q ss_pred ChHHHHHHHHHHHHHhhc
Q psy12791 375 GYTDLIADLDQALRKACK 392 (393)
Q Consensus 375 ~~~~~i~~l~~al~~~~~ 392 (393)
+++++++.+.++++++.+
T Consensus 395 ~~~~~l~~l~~~l~~~~~ 412 (413)
T 3t18_A 395 GEEKIPKLVQRLAFYTNK 412 (413)
T ss_dssp CGGGHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 887779999999987653
No 91
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.96 E-value=1.9e-29 Score=240.68 Aligned_cols=294 Identities=15% Similarity=0.110 Sum_probs=204.5
Q ss_pred CchHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHh---cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 58 NPTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHL---LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~---~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
.+...++++++|+++|.+ +.+++++|+++ + .++.++ +++||+|+++.++|+++...+...++..|++++.++.+
T Consensus 68 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~ 147 (406)
T 3cai_A 68 AAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVD 147 (406)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecC
Confidence 467889999999999987 67777777665 6 555555 78999999999999987655555555579999999875
Q ss_pred ------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEccc
Q psy12791 132 ------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLT 204 (393)
Q Consensus 132 ------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~s 204 (393)
|++++++.+++++++|++++|+||||.++|+++|.++|+++ |+++|+|++|+.+...... ..++|+++.|+|
T Consensus 148 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~ 226 (406)
T 3cai_A 148 IETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDV-GALVVVDHSAAAPYRLLDIRETDADVVTVNAH 226 (406)
T ss_dssp TTTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCCHHHHHHHHHT-TCEEEEECTTTTTTCCCCHHHHCCSEEEEEGG
T ss_pred cccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCHHHHHHHHHHc-CCEEEEEcccccCCCCCCchhcCCCEEEeehh
Confidence 78999999988899999999999999999999999999999 9999999999865431111 246899999999
Q ss_pred ccccCCCCceEE-EEEecChHHHHHHHHHHH---------hcCCCCCHHHHHH---HHhccC----------------CH
Q psy12791 205 KYMNGHSDVVMG-ATVTNDDSLQARLKFLQN---------SMGVVPSPFDCWL---VTRGLK----------------TL 255 (393)
Q Consensus 205 K~~~G~~G~r~G-~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~---~~~~~~----------------~~ 255 (393)
|++ | ++ +| |++++ +++.+.++.... ...+..+...... +...++ .+
T Consensus 227 K~~-g-~~--~G~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~ 301 (406)
T 3cai_A 227 AWG-G-PP--IGAMVFRD-PSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSM 301 (406)
T ss_dssp GGT-S-CS--CEEEEESC-HHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHH
T ss_pred hhc-C-CC--cCeEEEEe-hHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhH
Confidence 988 5 44 78 99987 777766543211 1122233333211 112111 13
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccC
Q psy12791 256 PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLG 335 (393)
Q Consensus 256 ~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g 335 (393)
....++..++++.+.+.|++++++. +..+. ...+++++|.+++ .....+.+.|...++.+..|
T Consensus 302 ~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~--------------~~~~~~~~~~~~~--~~~~~~~~~L~~~gi~v~~g 364 (406)
T 3cai_A 302 QSADAYLNRVFDYLMVSLRSLPLVM-LIGRP--------------EAQIPVVSFAVHK--VPADRVVQRLADNGILAIAN 364 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTEE-ECCCC--------------SSBCSEEEEEETT--BCHHHHHHHHHHTTEECEEC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeE-EcCCc--------------cccCCEEEEEECC--cCHHHHHHHHHHCCcEEecC
Confidence 4455666677888888888776653 22221 1124588888853 12333444444345555554
Q ss_pred CccccccCcccccCCCCChhhHhhcCC--CCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 336 GIESLADLPAEMTHKSIPKETRDALGI--TDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 336 ~~~s~~~~~~~~~~~~~~~~~~~~~g~--~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
...... ...|. ..+++|+|++..+++++++.+.++|+++
T Consensus 365 ~~~~~~----------------~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 365 TGSRVL----------------DVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp CSCHHH----------------HHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred ChHHHH----------------HHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 411100 01122 2579999999999999999999998765
No 92
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.96 E-value=9.2e-29 Score=234.45 Aligned_cols=287 Identities=15% Similarity=0.116 Sum_probs=203.8
Q ss_pred chHHHHHHHHHHHhCCC-cEEEeccH-HHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 59 PTRRNLERCIASLEEAK-HGLCYSSG-LGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~-~~i~~~~G-~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
+...++|+++|+++|.+ +.+++++| ++++ .++..+ +++||+|+++.|+|++....+...++..|++++.++.+
T Consensus 59 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 138 (390)
T 1elu_A 59 QLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATL 138 (390)
T ss_dssp HHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGS
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCC
Confidence 67889999999999986 45665555 5567 667777 78999999999999976544545567779999999873
Q ss_pred ----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHH----hCCCcEEEEeCccCcccccCCC-CCcCcEEEEc
Q psy12791 132 ----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVK----QHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYS 202 (393)
Q Consensus 132 ----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~----~~~~~~livDea~~~~~~~~~~-~~~~di~~~S 202 (393)
|++++++.+.+++++|++++|+||||.++|+++|.++|+ ++ |+++|+||+|+.+.....+ ..++|+++.|
T Consensus 139 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~-~~~li~Dea~~~g~~~~~~~~~~~d~~~~s 217 (390)
T 1elu_A 139 NQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNY-PVRVLVDGAQSAGSLPLDFSRLEVDYYAFT 217 (390)
T ss_dssp SSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSS-CCEEEEECTTTBTTBCCCTTTSCCSEEEEE
T ss_pred CccchHHHHHHhcCCCceEEEEeccccCCceecCHHHHHHHHhhhhhhc-CcEEEEEcccccCCcCCChhhcCCCEEEcc
Confidence 688999999888999999999999999999999999999 99 9999999999865432222 2468999999
Q ss_pred ccccccCCCCceEEEEEecChHHHHHHHHHH----------------------HhcCCCCCHHHHHHH---Hhcc---CC
Q psy12791 203 LTKYMNGHSDVVMGATVTNDDSLQARLKFLQ----------------------NSMGVVPSPFDCWLV---TRGL---KT 254 (393)
Q Consensus 203 ~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~---~~~~---~~ 254 (393)
+||++.|+.| +||++++ +++++.++... ....+..+......+ +..+ ..
T Consensus 218 ~~K~~~~~~g--~G~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~ 294 (390)
T 1elu_A 218 GHKWFAGPAG--VGGLYIH-GDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGT 294 (390)
T ss_dssp SSSTTCCCTT--CEEEEEC-TTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCC
T ss_pred ccccccCCCc--eEEEEEC-HHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCC
Confidence 9996656665 8999998 66666553211 111223333332222 2211 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcccccccc
Q psy12791 255 LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESL 334 (393)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 334 (393)
+...+++..++++.+.+.|++++++. +..|. .+.++++.+.++.. .....+.+.|...++.+..
T Consensus 295 ~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~--------------~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~ 358 (390)
T 1elu_A 295 AEERYQAICQRSEFLWRGLNQLPHVH-CLATS--------------APQAGLVSFTVDSP-LGHRAIVQKLEEQRIYLRT 358 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTEE-ESCSS--------------CCSSSEEEEEECSS-SCHHHHHHHHHHTTEECEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcE-EecCc--------------cccccEEEEEcCCC-CCHHHHHHHHHHCCEEEEe
Confidence 55667777888889999998876653 22221 12357888888411 1233444444433444443
Q ss_pred CCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 335 GGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 335 g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
|. .++++|+|++...++++++.+.++|+++.
T Consensus 359 ~~--------------------------~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 389 (390)
T 1elu_A 359 IA--------------------------DPDCIRACCHYITDEEEINHLLARLADFG 389 (390)
T ss_dssp ET--------------------------TTTEEEEECCTTCCHHHHHHHHHHHTTCC
T ss_pred cC--------------------------CCCeEEEecccCCCHHHHHHHHHHHHhhC
Confidence 21 15799999999999999999998887653
No 93
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.96 E-value=2e-29 Score=242.61 Aligned_cols=316 Identities=12% Similarity=0.070 Sum_probs=203.4
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCC---CCccccCCC-CchHHHHHHHHHHHh----CCC-cEEEeccHHHH-HHHH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPP---QGFEYSRSN-NPTRRNLERCIASLE----EAK-HGLCYSSGLGA-VTAV 90 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~---~~~~y~~~~-~~~~~~lr~~la~~~----~~~-~~i~~~~G~~a-l~~~ 90 (393)
.+.++ +++.+++.+++.+.+++.+... ....+..|+ ..+..+|++++|+++ +.+ ++|++++|+++ +.++
T Consensus 56 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~l 135 (432)
T 3ei9_A 56 AQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRL 135 (432)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHHH
Confidence 35677 7777777666666554432211 112223343 456789999999986 554 78888888876 6556
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCC------------cEEEeeCCCCHH----HHHhhcCCCCcEEEEecCCC
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIG------------LEVDFVDLRKIE----NLIKYIKPNTKMVWIENPTN 154 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g------------~~v~~~~~~d~~----~l~~~l~~~~~~v~l~~p~n 154 (393)
..++++||.|++++|+|++. ...++..| .+++.++.++.+ ++++ .+++++|++++|||
T Consensus 136 ~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~v~l~~p~N 209 (432)
T 3ei9_A 136 QVMFGSNVTIAVQDPSYPAY----VDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST--VGRTDIIFFCSPNN 209 (432)
T ss_dssp HHHHCTTCCEEEEESCCTHH----HHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG--CCCCSEEEEESSCT
T ss_pred HHHcCCCCEEEEeCCCCHHH----HHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh--CCCCCEEEEeCCCC
Confidence 77889999999999999863 33333333 356666654211 2222 25789999999999
Q ss_pred CcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC-CC-------CCcCcEEEEcccccccCCCCceEEEEEecCh
Q psy12791 155 PLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK-SL-------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDD 223 (393)
Q Consensus 155 ptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~-~~-------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~ 223 (393)
|||.+++ +++|.++|+++ |+++|+||+|+++.... +. ..++++++.|+||.+ |++|+|+||++++ +
T Consensus 210 PtG~~~~~~~l~~l~~la~~~-~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~r~G~~~~~-~ 286 (432)
T 3ei9_A 210 PTGAAATREQLTQLVEFAKKN-GSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYA-GFTGVRLGWTVIP-K 286 (432)
T ss_dssp TTCCCCCHHHHHHHHHHHHHH-TCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHH-CTTTTCCEEEECC-T
T ss_pred CCCCCCCHHHHHHHHHHHHHc-CcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhcc-CCcccceEEEEEC-h
Confidence 9999998 56677779999 99999999999764421 11 124579999999999 6999999999998 4
Q ss_pred HH--------HHHHHHHHHhcCCCCCHHHHHHHHhccCC-----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCC
Q psy12791 224 SL--------QARLKFLQNSMGVVPSPFDCWLVTRGLKT-----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSH 290 (393)
Q Consensus 224 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~ 290 (393)
++ .+.+...........++..+..+...+.. +...++++.++.+.+.+.|+++ ++... .+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~---- 360 (432)
T 3ei9_A 287 KLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVY-GGK---- 360 (432)
T ss_dssp TCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEE-ECS----
T ss_pred HHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-Cceec-CCC----
Confidence 44 67676655544445566665555554432 3445666677888888888865 33322 111
Q ss_pred cchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEE
Q psy12791 291 PNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRL 369 (393)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRl 369 (393)
.+.++|+.+++ . ....+.+.+ +..++.+..|..+.. ..++++|+
T Consensus 361 ------------~~~~~~~~~~~-~-~~~~~~~~ll~~~gv~v~~g~~f~~---------------------~~~~~iRi 405 (432)
T 3ei9_A 361 ------------NAPYVWVHFPN-Q-SSWDVFAEILEKTHVVTTPGSGFGP---------------------GGEGFVRV 405 (432)
T ss_dssp ------------SSSEEEEECTT-S-CHHHHHHHHHHHHCEECEEGGGGCG---------------------GGTTEEEE
T ss_pred ------------cceEEEEECCC-C-CHHHHHHHHHHHCCEEEeCchHhCC---------------------CCCCEEEE
Confidence 24678998852 1 122222222 223555555544321 01589999
Q ss_pred EecCCChHHHHHHHHHHHHH
Q psy12791 370 SVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 370 s~~~~~~~~~i~~l~~al~~ 389 (393)
|+.. ++++++...+.|++
T Consensus 406 s~~~--~~e~l~~~l~rl~~ 423 (432)
T 3ei9_A 406 SAFG--HRENILEACRRFKQ 423 (432)
T ss_dssp ECCS--CHHHHHHHHHHHHH
T ss_pred EecC--CHHHHHHHHHHHHH
Confidence 9843 55555555555543
No 94
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.96 E-value=1.3e-29 Score=240.56 Aligned_cols=284 Identities=12% Similarity=0.100 Sum_probs=186.8
Q ss_pred HHHHHHHHHHhCC------C-cEEEeccHHHH-H-HHHHHhcCCCC----eEEEcCCCccchHHHHHHhcccCCcEEEee
Q psy12791 62 RNLERCIASLEEA------K-HGLCYSSGLGA-V-TAVTHLLSAGD----HIISGDDVYGGTYRYFAQVAPKIGLEVDFV 128 (393)
Q Consensus 62 ~~lr~~la~~~~~------~-~~i~~~~G~~a-l-~~~~~~~~~gd----~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~ 128 (393)
.+||+++|++++. + ++|++|+|+++ + .++..++++|| +|++++|+|.. +...++..|++++.+
T Consensus 71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~----~~~~~~~~g~~~~~~ 146 (391)
T 3bwn_A 71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYST----YVEETTYVRSGMYKW 146 (391)
T ss_dssp HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTH----HHHHHHTTCBTTEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchh----HHHHHHHcCCeEEEe
Confidence 8999999999872 4 58999999886 7 66777889999 99999999984 677788889888887
Q ss_pred CCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC--CCcCcEEEEccccc
Q psy12791 129 DLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL--PWGVDIVLYSLTKY 206 (393)
Q Consensus 129 ~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~--~~~~di~~~S~sK~ 206 (393)
+.+ .+.++ .+++++|++++||||||.+++ +|.+.++.+ ++++|+||+|..... .++ ..+++++++||||.
T Consensus 147 ~~d-~~~l~---~~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~-~~~ii~De~y~~~~~-~~l~~~~~~~i~~~S~SK~ 218 (391)
T 3bwn_A 147 EGD-AWGFD---KKGPYIELVTSPNNPDGTIRE--TVVNRPDDD-EAKVIHDFAYYWPHY-TPITRRQDHDIMLFTFSKI 218 (391)
T ss_dssp EEE-STTCC---CCSCEEEEEESSCTTTCCCCC--CCC-----C-CCEEEEECTTCSTTT-SCCCCCBCCSEEEEEHHHH
T ss_pred cCC-HHHcC---CCCCEEEEECCCCCCCchhHH--HHHHHhhcC-CCEEEEeCCCCCCCC-CccccCCCCeEEEEechhh
Confidence 764 22232 357899999999999999997 454321222 499999999985211 122 24678999999999
Q ss_pred ccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhcc-------------C-CHHHHHHHHHHHHHHHHHH
Q psy12791 207 MNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGL-------------K-TLPCRLKEHERGSIEVAKF 272 (393)
Q Consensus 207 ~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~~l~~~ 272 (393)
+ |++|+|+||++++++++++.+...........+...+..+...+ + .+...++.+.++++.+.+.
T Consensus 219 ~-g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 297 (391)
T 3bwn_A 219 T-GHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREV 297 (391)
T ss_dssp H-SCGGGCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred c-CCCccceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 79999999999844889888877665433444555444333322 2 2444566667788888999
Q ss_pred HhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCC
Q psy12791 273 LESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSI 352 (393)
Q Consensus 273 l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~ 352 (393)
|++++++. +..|. .. ............|.++|+.++. .+....+ +...++.+..|..+.
T Consensus 298 L~~~~~~~-~~~p~-~~--~~~f~~~~~~~~g~~~~~~~~~-~~~~~~~---l~~~gV~v~pg~~fg------------- 356 (391)
T 3bwn_A 298 VKESDAFT-LPKYP-EA--FCNYFGKSLESYPAFAWLGTKE-ETDLVSE---LRRHKVMSRAGERCG------------- 356 (391)
T ss_dssp HHTCSSEE-CCCCC-CE--EETTTTEEECCCCSEEEEEESS-SCCHHHH---HHHTTEECEEGGGGT-------------
T ss_pred HHhCCCcc-cccCC-cc--ccccccccCCCcceEEEecCCc-HHHHHHH---HHHCCEEEccCCCCC-------------
Confidence 98775432 11111 00 0000000001123478999952 2233333 333456666655431
Q ss_pred ChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 353 PKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 353 ~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..++++|||++. ++++++.+.++|+++
T Consensus 357 ---------~~~~~iRis~~~--~~e~i~~~~~~L~~~ 383 (391)
T 3bwn_A 357 ---------SDKKHVRVSMLS--REDVFNVFLERLANM 383 (391)
T ss_dssp ---------CCTTEEEEESCS--CHHHHHHHHHHHHSC
T ss_pred ---------CCCCEEEEEecC--CHHHHHHHHHHHHHH
Confidence 125899999984 566667777766654
No 95
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.96 E-value=5.4e-29 Score=237.88 Aligned_cols=282 Identities=15% Similarity=0.118 Sum_probs=206.9
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLI 137 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~ 137 (393)
+...+++++++++++.+..+++++|++++ .++.+++++||.|+++.|+|.+ +...++..|.+++.++..|+++++
T Consensus 104 ~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~~d~~~le 179 (409)
T 3kki_A 104 YDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMS----LWEGARYANAQAHPFMHNNCDHLR 179 (409)
T ss_dssp TTSCHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHH----HHHHHHHTTCEEEEECTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEecchHHHHHHHHHHhcCCCCEEEECCCcCHH----HHHHHHHcCCeEEEecCCCHHHHH
Confidence 45678999999999999999999999887 7788889999999999999986 445567789999999988999999
Q ss_pred hhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC---------CCCCcCcEEEEcccccc
Q psy12791 138 KYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK---------SLPWGVDIVLYSLTKYM 207 (393)
Q Consensus 138 ~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~---------~~~~~~di~~~S~sK~~ 207 (393)
+.+.+ ++++|++++|+||||.+.|+++|.++|+++ |++||+||+|+.+.+.. ....+.|+++.|+||++
T Consensus 180 ~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~-~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~ 258 (409)
T 3kki_A 180 MLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEF-GCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTF 258 (409)
T ss_dssp HHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHH-TCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTT
T ss_pred HHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHc-CCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhh
Confidence 99875 489999999999999999999999999999 99999999998743311 11225789999999999
Q ss_pred cCCCCceEEEEEecChHHHHHHHHHH--HhcCCCCCHHHHHHHHhccCCH---HHHHHHHHHHHHHHHHHHhhCCCcceE
Q psy12791 208 NGHSDVVMGATVTNDDSLQARLKFLQ--NSMGVVPSPFDCWLVTRGLKTL---PCRLKEHERGSIEVAKFLESHPCVKGV 282 (393)
Q Consensus 208 ~G~~G~r~G~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~v 282 (393)
+ ++ +||++++ +++++.++... ..++...++..+..+...++.. ...+++..++.+.+.+.|++.. +.
T Consensus 259 ~-~~---gg~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~-- 330 (409)
T 3kki_A 259 A-YR---AGAIWCN-NEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLG-LT-- 330 (409)
T ss_dssp C-SS---CEEEEES-SSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTT-CC--
T ss_pred C-CC---ceEEEEC-HHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC-Cc--
Confidence 4 44 5999987 66666665422 2234445565544444433322 3455566777788888887642 11
Q ss_pred eCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCC
Q psy12791 283 LHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGI 362 (393)
Q Consensus 283 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~ 362 (393)
.. +.+.++++.++ .......+.+.+...++.+..+.. +. ...
T Consensus 331 -~~----------------~~~~~~~~~~~-~~~~~~~~~~~L~~~Gv~v~~~~~------~~--------------~~~ 372 (409)
T 3kki_A 331 -IR----------------SESQIIGLETG-DERNTEKVRDYLESNGVFGSVFCR------PA--------------TSK 372 (409)
T ss_dssp -CC----------------CSSSEEEEEEE-SHHHHHHHHHHHHHTTEECEEECT------TS--------------SCT
T ss_pred -cC----------------CCCCEEEEEeC-CHHHHHHHHHHHHHCCceEeeeCC------CC--------------cCC
Confidence 11 12578898884 455556666666544554433211 00 001
Q ss_pred CCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 363 TDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 363 ~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+++||++++..+++++++.+.++|+++.
T Consensus 373 ~~~~iRi~~~~~~t~e~i~~~~~~l~~~l 401 (409)
T 3kki_A 373 NKNIIRLSLNSDVNDEQIAKIIEVCSDAV 401 (409)
T ss_dssp TCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence 25899999999999888888888887653
No 96
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.96 E-value=4.3e-29 Score=237.10 Aligned_cols=316 Identities=14% Similarity=0.149 Sum_probs=213.1
Q ss_pred CCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-c-EEEeccHHH-HH-HHHHHhcCCCCeEEEc
Q psy12791 28 CVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-H-GLCYSSGLG-AV-TAVTHLLSAGDHIISG 103 (393)
Q Consensus 28 ~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~-~i~~~~G~~-al-~~~~~~~~~gd~vl~~ 103 (393)
.+.+|+.+++.+.+++.+.... .|..++.+...++++.+++++|.+ + .+++++|++ ++ .++..++++||+|+++
T Consensus 23 ~~~g~~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 100 (393)
T 2huf_A 23 MGPGPSNAPQRVLDAMSRPILG--HLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIG 100 (393)
T ss_dssp CSSSCCCCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ecCCCCCCCHHHHHHHHhhhcc--CCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEE
Confidence 4666777777887777665432 233233467889999999999986 3 677766655 57 6777778999999999
Q ss_pred CCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEE
Q psy12791 104 DDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILL 177 (393)
Q Consensus 104 ~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~l 177 (393)
+|+|++. .+...++..|++++.++.+ |++++++.+++ ++++|++++|+||||.++|+++|.++|+++ |+++
T Consensus 101 ~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~-~~~l 177 (393)
T 2huf_A 101 HTGHWGD--RSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQH-NCLL 177 (393)
T ss_dssp ESSHHHH--HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHT-TCEE
T ss_pred CCCcchH--HHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHc-CCEE
Confidence 9999863 2344556789999998863 78999999887 899999999999999999999999999999 9999
Q ss_pred EEeCccCcccccCCC-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH----H-h---------cC-----
Q psy12791 178 VLDNTFLTAYYQKSL-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ----N-S---------MG----- 237 (393)
Q Consensus 178 ivDea~~~~~~~~~~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~----~-~---------~~----- 237 (393)
|+|+++..+.....+ ..++|+++.|+||+++|++|+ ||++++ +++++.++... . . ++
T Consensus 178 i~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G~--G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (393)
T 2huf_A 178 IVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGI--TPVSFS-HRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRP 254 (393)
T ss_dssp EEECTTTBTTBCCCTTTTTCSEEECCSSSTTCCCSSC--EEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSC
T ss_pred EEEcccccCCCCcchhhcCccEEEECCCcccccCCCe--EEEEEC-HHHHHHHhhcCCCCceEEEchHHHHhhhcccccc
Confidence 999999864432222 246899999999987678995 999997 88888775431 1 0 11
Q ss_pred ----CCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEE
Q psy12791 238 ----VVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLS 308 (393)
Q Consensus 238 ----~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 308 (393)
...+......+...++ .+....++..++++.+.+.|+++ ++. +..+. . ...+.+++
T Consensus 255 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-----~--------~~~~~~~~ 319 (393)
T 2huf_A 255 RIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA-GFE-LYADP-----K--------DRLSTVTT 319 (393)
T ss_dssp CCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCG-----G--------GBCTTEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CCe-eccCc-----c--------ccCCcEEE
Confidence 1223333222222222 24455667777788888888765 332 11110 0 01135788
Q ss_pred EEEcCCHHHHHHHHHhcCc-cccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEe-cCCChHHHHHHHHHH
Q psy12791 309 FYVNGGAEETRIFLESLLI-FRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSV-GVEGYTDLIADLDQA 386 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~l~~-~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~-~~~~~~~~i~~l~~a 386 (393)
+.++. ....+.+.+.|.. .++.+..|..+ ..++++|+++ ++.+++++++.+.++
T Consensus 320 ~~~~~-~~~~~~~~~~L~~~~gi~v~~g~~~-----------------------~~~~~~Ri~~~~~~~~~e~i~~~~~~ 375 (393)
T 2huf_A 320 IKVPQ-GVDWLKAAQYAMKTYLVEISGGLGP-----------------------TAGQVFRIGLMGQNATTERVDRVLQV 375 (393)
T ss_dssp EECCT-TCCHHHHHHHHHHHHCEECBCCCGG-----------------------GTTTEEEEECCGGGCSHHHHHHHHHH
T ss_pred EEcCC-CCCHHHHHHHHHHhCCEEEecCccc-----------------------ccCCEEEEEcccCcCCHHHHHHHHHH
Confidence 88741 1123344444432 24555444321 0258999999 555567667777777
Q ss_pred HHHh
Q psy12791 387 LRKA 390 (393)
Q Consensus 387 l~~~ 390 (393)
|+++
T Consensus 376 l~~~ 379 (393)
T 2huf_A 376 FQEA 379 (393)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 97
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.96 E-value=2.7e-28 Score=231.31 Aligned_cols=314 Identities=16% Similarity=0.118 Sum_probs=216.6
Q ss_pred ccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 53 YSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 53 y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
+.+++.+...++|+++|+++|.+++++++||++++ .++..+ +++||+|+++.|+|++ +...++..|++++.++.
T Consensus 32 ~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~~~----~~~~~~~~g~~~~~v~~ 107 (388)
T 1b9h_A 32 WWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFIS----SSQAAQRLGAVTVPVDV 107 (388)
T ss_dssp CBTTTCSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTH----HHHHHHHTTCEEEEECB
T ss_pred eeecCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHH----HHHHHHHcCCEEEEEec
Confidence 34455688999999999999999999999998778 777777 7899999999999996 44556788999999886
Q ss_pred C------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCc--CcEEEEc
Q psy12791 131 R------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWG--VDIVLYS 202 (393)
Q Consensus 131 ~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~--~di~~~S 202 (393)
+ |++++++.+++++++|+ |+||||.+.++++|.++|+++ |+++|+|++|+.+........+ .|+++.|
T Consensus 108 ~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~la~~~-~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S 183 (388)
T 1b9h_A 108 DAATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKISADT-GVPLLQDAAHAHGARWQGKRVGELDSIATFS 183 (388)
T ss_dssp CTTTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHH-TCCBCEECTTCTTCEETTEEGGGSSSCEEEE
T ss_pred CCCcCCCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHHHHHc-CCEEEEecchhcCCccCCeecccccceEEEE
Confidence 4 78999999988888877 999999999999999999999 9999999999875432111111 2788899
Q ss_pred ccccccCCCCceEEEEEecChHH--HHHHHHHHHh-------------cCC--CCCHHHHHHHHhccCCHHHHHHHHHHH
Q psy12791 203 LTKYMNGHSDVVMGATVTNDDSL--QARLKFLQNS-------------MGV--VPSPFDCWLVTRGLKTLPCRLKEHERG 265 (393)
Q Consensus 203 ~sK~~~G~~G~r~G~~~~~~~~~--~~~~~~~~~~-------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (393)
|||.. +++|.|+||++++++.+ .+.++..... .|. ..++..++.+...++.+...+++..++
T Consensus 184 ~s~~K-~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~ 262 (388)
T 1b9h_A 184 FQNGK-LMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVRDER 262 (388)
T ss_dssp CCTTS-SSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred ccCCC-cccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88544 24445899999985446 5655433211 011 145555555566677787788888888
Q ss_pred HHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-HHHHHHHHHhcCccccccccCCccccccCc
Q psy12791 266 SIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-AEETRIFLESLLIFRCAESLGGIESLADLP 344 (393)
Q Consensus 266 ~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~ 344 (393)
.+.+.+.|+.++++. +..+. ... ....+.++++.+++. ....+.+.+.|...++.++.+... ....+
T Consensus 263 ~~~l~~~L~~~~~~~-~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~-~~~~~ 330 (388)
T 1b9h_A 263 WTLLSRLLGAIDGVV-PQGGD-VRA---------DRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFRA-IYRTD 330 (388)
T ss_dssp HHHHHHHHHTSTTCE-ECCCC-TTC---------CBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCCC-GGGSH
T ss_pred HHHHHHHhccCCCcc-ccCCC-cCC---------CccceEEEEEEeCCcCcccHHHHHHHHHHCCCCcccccCc-cccCh
Confidence 899999998876653 21111 000 011246789998531 234566666665556655543221 11111
Q ss_pred ccccCC-----------CCChhhHhhcCCCCCeEEEEecCCC-hHHHHHHHHHHHHHhh
Q psy12791 345 AEMTHK-----------SIPKETRDALGITDNLVRLSVGVEG-YTDLIADLDQALRKAC 391 (393)
Q Consensus 345 ~~~~~~-----------~~~~~~~~~~g~~~~~iRls~~~~~-~~~~i~~l~~al~~~~ 391 (393)
...... .++..... ..+.|||+++... ++++++.+.++|+++.
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~l~~~~~~~t~edi~~~~~~l~~~~ 385 (388)
T 1b9h_A 331 AFWELGAPDESVDAIARRCPNTDAI----SSDCVWLHHRVLLAGEPELHATAEIIADAV 385 (388)
T ss_dssp HHHHSSCCSSCHHHHHHTCHHHHHH----HHHEEEEEGGGGGSCHHHHHHHHHHHHHHH
T ss_pred HhHhcCCCcccccccccCCHHHHHH----HhCeEEecCCCCCCCHHHHHHHHHHHHHHH
Confidence 000000 01111111 1358999999999 9999999999998764
No 98
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.96 E-value=2.2e-29 Score=237.25 Aligned_cols=292 Identities=15% Similarity=0.127 Sum_probs=203.9
Q ss_pred ccCCCCchHHHHHHH-HHHHhCCCcEEEeccHHH-HH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC
Q psy12791 53 YSRSNNPTRRNLERC-IASLEEAKHGLCYSSGLG-AV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD 129 (393)
Q Consensus 53 y~~~~~~~~~~lr~~-la~~~~~~~~i~~~~G~~-al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~ 129 (393)
+.+++.+...+++++ +|+++|.+ ++++++|++ ++ .++..++++||+|++++|+|++. ...++..|++++.++
T Consensus 47 ~~~~~~~~~~~l~~~~la~~~~~~-~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~----~~~~~~~g~~~~~v~ 121 (371)
T 2e7j_A 47 LDEIKTPPIHDFIHNQLPKFLGCD-VARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSS----YVAAERAGLNIALVP 121 (371)
T ss_dssp ------CCHHHHHHTHHHHHTTSS-EEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHH----HHHHHHTTCEEEEEC
T ss_pred chhhHHHHHHHHHHHHHHHHcCCC-EEEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHH----HHHHHHcCCeEEEee
Confidence 344567889999999 99999988 888888854 57 77777789999999999999863 444678899999999
Q ss_pred --CC-----CHHHHHhhcC-----CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcC
Q psy12791 130 --LR-----KIENLIKYIK-----PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGV 196 (393)
Q Consensus 130 --~~-----d~~~l~~~l~-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~ 196 (393)
.+ |++++++.++ +++++|++++|+||||.++|+++|.++|+++ |+++|+|++|+.+...... ..++
T Consensus 122 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~ 200 (371)
T 2e7j_A 122 KTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEY-DVPLLVNGAYAIGRMPVSLKEIGA 200 (371)
T ss_dssp CCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTT-TCCEEEECTTTBTTBCCCHHHHTC
T ss_pred cccCCCCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHc-CCeEEEECccccCCCCCChhhcCC
Confidence 65 7999999887 6899999999999999999999999999999 9999999999986542211 2368
Q ss_pred cEEEEcccccccCCCCceEEEEEecChHHHHH-HHHHHH--hc-----CCCCCHHHHHHHHhccCCHH-HHHHHH--HHH
Q psy12791 197 DIVLYSLTKYMNGHSDVVMGATVTNDDSLQAR-LKFLQN--SM-----GVVPSPFDCWLVTRGLKTLP-CRLKEH--ERG 265 (393)
Q Consensus 197 di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~-~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~ 265 (393)
|++++|+||+++ .++ |+||++++ +++++. ++.... .. ....++.....+...++.+. ...++. .++
T Consensus 201 di~~~s~sK~~~-~~~-~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 277 (371)
T 2e7j_A 201 DFIVGSGHKSMA-ASG-PIGVMGMK-EEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEK 277 (371)
T ss_dssp SEEEEEHHHHSS-CCS-SCEEEEEC-TTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHH
T ss_pred CEEEecCCcCCC-CCC-CcEEEEEe-chhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999985 343 79999998 566565 533222 11 22334444333333333332 234455 667
Q ss_pred HHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcc
Q psy12791 266 SIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPA 345 (393)
Q Consensus 266 ~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~ 345 (393)
++.+.+.|+++ ++. +..+. ...++++++.++ ....+.+.+...++.+.. ..+...
T Consensus 278 ~~~l~~~L~~~-~~~-~~~~~--------------~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~-~~~~~~---- 332 (371)
T 2e7j_A 278 ARRFAAEMEKL-GIK-QLGDN--------------PHNHDLMFFHAE----VLYEISKKAKGGRFFLYR-ELKSRK---- 332 (371)
T ss_dssp HHHHHHHHHHT-TCE-EESSS--------------SCCSSEEEEECH----HHHHHHHHSSSGGGHHHH-HHHHTT----
T ss_pred HHHHHHHHHHc-CcE-EecCC--------------CccCceEEEECC----CHHHHHHHHHHCCEEEEe-cccccc----
Confidence 77888888776 443 22221 112568888883 456677777655555432 110000
Q ss_pred cccCCCCChhhHhhcCCCCCeEE-EEecCC-ChHHHHHHHHHHHHHhh
Q psy12791 346 EMTHKSIPKETRDALGITDNLVR-LSVGVE-GYTDLIADLDQALRKAC 391 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~g~~~~~iR-ls~~~~-~~~~~i~~l~~al~~~~ 391 (393)
..|..++++| ++++.. .++++++.+.++|+++.
T Consensus 333 -------------~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~ 367 (371)
T 2e7j_A 333 -------------IHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEII 367 (371)
T ss_dssp -------------EECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHH
T ss_pred -------------ccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHH
Confidence 0022368999 999988 88888888888887654
No 99
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.96 E-value=2.3e-28 Score=234.19 Aligned_cols=237 Identities=13% Similarity=0.125 Sum_probs=163.4
Q ss_pred CCccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHHh----CCC--cEEEeccHHHH-H-HHHHHhcCCCCeEEE
Q psy12791 32 PIILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASLE----EAK--HGLCYSSGLGA-V-TAVTHLLSAGDHIIS 102 (393)
Q Consensus 32 p~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~~----~~~--~~i~~~~G~~a-l-~~~~~~~~~gd~vl~ 102 (393)
++.+++.+.+++..... .....| +..+..++|+++++++ +.+ +.+++++|+++ + .++..++++||+|++
T Consensus 54 ~~~~~~~v~~a~~~~~~--~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~ 131 (418)
T 3rq1_A 54 NLVFLKTVKEEYLSLSD--SEHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLT 131 (418)
T ss_dssp CBCCCHHHHHHHHTCCH--HHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CccccHHHHHHHHHhcc--cccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHhcCCCCEEEE
Confidence 56566555554433211 112233 3356789999999976 322 27777777665 7 777788999999999
Q ss_pred cCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCC----CCc-EEEEecC-CCCcccccCHHHHH---H
Q psy12791 103 GDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKP----NTK-MVWIENP-TNPLMTVFDVKAIS---A 167 (393)
Q Consensus 103 ~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~----~~~-~v~l~~p-~nptG~~~~~~~l~---~ 167 (393)
+.|+|.+ +...++..|.+++.++.+ |++++++.+.+ +++ ++++++| |||||.++|.+++. +
T Consensus 132 ~~p~~~~----~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~ 207 (418)
T 3rq1_A 132 ADWYWGA----YRVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILN 207 (418)
T ss_dssp ESSCCTH----HHHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred CCCCchh----HHHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHH
Confidence 9999984 667788899999999863 78899888864 566 8888999 99999999966555 5
Q ss_pred HHH------hCCCcEEEEeCccCcccccC----CC-C----CcC---cEEEEcccccccCCCCceEEEEEe--cChHHHH
Q psy12791 168 VVK------QHPDILLVLDNTFLTAYYQK----SL-P----WGV---DIVLYSLTKYMNGHSDVVMGATVT--NDDSLQA 227 (393)
Q Consensus 168 l~~------~~~~~~livDea~~~~~~~~----~~-~----~~~---di~~~S~sK~~~G~~G~r~G~~~~--~~~~~~~ 227 (393)
+|+ ++ ++++|+||+|..+.+.. ++ . ... .++++|+||.+ |++|+|+||+++ +++++++
T Consensus 208 ~~~~~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~~~~~~~~~ 285 (418)
T 3rq1_A 208 FLKDLVAIGRN-NVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGF-TMYGQRVGAMIGISDDEEIAD 285 (418)
T ss_dssp HHHHHHHTSSC-EEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTT-TCCSSCCEEEEEEESSHHHHH
T ss_pred HHHHhhhccCC-CeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCC-cCcCCcceEEEEEeCCHHHHH
Confidence 555 89 99999999998654321 11 1 112 38899999999 699999999998 2388888
Q ss_pred HHHHHHHhc----CCCCCHHHHHHHHhccCCHH----------HHHHHHHHHHHHHHHHHhhC
Q psy12791 228 RLKFLQNSM----GVVPSPFDCWLVTRGLKTLP----------CRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 228 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~~l~~~ 276 (393)
.+....... ....+...+..+...++... ..++.+.++.+.+.+.|+.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (418)
T 3rq1_A 286 EFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV 348 (418)
T ss_dssp HHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 887654321 23345555555555444421 22344556666677777654
No 100
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.96 E-value=4.3e-29 Score=237.14 Aligned_cols=316 Identities=13% Similarity=0.124 Sum_probs=215.4
Q ss_pred CCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-c-EEEeccHHH-HH-HHHHHhcCCCCeEEEcC
Q psy12791 29 VIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-H-GLCYSSGLG-AV-TAVTHLLSAGDHIISGD 104 (393)
Q Consensus 29 ~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~-~i~~~~G~~-al-~~~~~~~~~gd~vl~~~ 104 (393)
+.+|..+++.+.+++.+.... .|+....+..+++++.+++++|.+ + .+++++|++ ++ .++..++++||+|++++
T Consensus 39 ~~~~~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~ 116 (393)
T 1vjo_A 39 GPGPSNAHPSVLQAMNVSPVG--HLDPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGV 116 (393)
T ss_dssp SSSCCCCCHHHHHHHSSCCCC--TTSHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred cCCCCCCCHHHHHHHhccccc--ccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEc
Confidence 556666666777666554322 232212245678899999999986 5 677776655 57 67777889999999999
Q ss_pred CCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEE
Q psy12791 105 DVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLV 178 (393)
Q Consensus 105 ~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~li 178 (393)
|+|++. .+...++..|++++.++.+ |++++++.+++ ++++|++++|+||||.+.|+++|.++|+++ |+++|
T Consensus 117 ~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~li 193 (393)
T 1vjo_A 117 AGYFGN--RLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREF-GTLLL 193 (393)
T ss_dssp SSHHHH--HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHH-TCEEE
T ss_pred CChhHH--HHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHc-CCEEE
Confidence 999852 2566677889999999863 78999999887 899999999999999999999999999999 99999
Q ss_pred EeCccCcccccCCC-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH----HH---------------hcCC
Q psy12791 179 LDNTFLTAYYQKSL-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL----QN---------------SMGV 238 (393)
Q Consensus 179 vDea~~~~~~~~~~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~----~~---------------~~~~ 238 (393)
+||+|+.+.....+ ..++|+++.|+||+++ .++ |+||++++ +++++.++.. .. ....
T Consensus 194 ~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~-~~~-~~G~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (393)
T 1vjo_A 194 VDTVTSLGGVPIFLDAWGVDLAYSCSQKGLG-CSP-GASPFTMS-SRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYH 270 (393)
T ss_dssp EECTTTTTTSCCCTTTTTCSEEECCSSSTTC-SCS-SCEEEEEC-HHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCC
T ss_pred EECCccccCcCCcccccCccEEEEcCccccc-CCC-ceEEEEEC-HHHHHHHhccCCCCCceecCcHhhhhhhccCCCCC
Confidence 99999944321111 2467999999999995 566 79999997 7777766321 00 1111
Q ss_pred -CCCHHHHHHHHhccCC-----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc
Q psy12791 239 -VPSPFDCWLVTRGLKT-----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN 312 (393)
Q Consensus 239 -~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (393)
..+...+..+...++. +...+++..++.+.+.+.|++. ++. +..|. . ...+.+++|.++
T Consensus 271 g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-----~--------~~~~~~~~~~~~ 335 (393)
T 1vjo_A 271 HTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLS-LHVEK-----E--------YRLPTLTTVCIP 335 (393)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCG-----G--------GBCSSEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCc-----c--------ccCCcEEEEEcC
Confidence 4455544443333332 3445666777888888888765 332 11111 0 012467888874
Q ss_pred CCHHHHHHHHHhcCcc-ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEe-cCCChHHHHHHHHHHHHHh
Q psy12791 313 GGAEETRIFLESLLIF-RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSV-GVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 313 ~~~~~~~~~~~~l~~~-~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~-~~~~~~~~i~~l~~al~~~ 390 (393)
. ......+.+.+... ++.+..|..+. .++++|+|+ ++.+++++++.+.++|+++
T Consensus 336 ~-~~~~~~~~~~l~~~~gi~v~~g~~~~-----------------------~~~~iRis~~~~~~~~~~i~~~~~~l~~~ 391 (393)
T 1vjo_A 336 D-GVDGKAVARRLLNEHNIEVGGGLGEL-----------------------AGKVWRVGLMGFNSRKESVDQLIPALEQV 391 (393)
T ss_dssp T-TCCHHHHHHHHHHHHCEECEECCGGG-----------------------TTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred C-CCCHHHHHHHHHhhCCEEEecCcccc-----------------------CCCEEEEeCCccCChHHHHHHHHHHHHHH
Confidence 2 11234455555443 55555544211 158999995 6667777788888888765
Q ss_pred h
Q psy12791 391 C 391 (393)
Q Consensus 391 ~ 391 (393)
.
T Consensus 392 l 392 (393)
T 1vjo_A 392 L 392 (393)
T ss_dssp H
T ss_pred h
Confidence 3
No 101
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.96 E-value=1.2e-28 Score=236.29 Aligned_cols=301 Identities=19% Similarity=0.167 Sum_probs=200.7
Q ss_pred chHHHHHHHHHHHhCCC-cEEEeccH-HHHH-HHHHHhc----CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 59 PTRRNLERCIASLEEAK-HGLCYSSG-LGAV-TAVTHLL----SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~-~~i~~~~G-~~al-~~~~~~~----~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
+...++++.++++++.+ +.+++++| ++++ .++.++. ++||+|+++.++|++....+.. ++..|++++.++.+
T Consensus 68 ~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~ 146 (423)
T 3lvm_A 68 EAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQ-LEREGFEVTYLAPQ 146 (423)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHH-HHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHH-HHHcCCEEEEeccC
Confidence 45688999999999987 45555555 5567 6666565 3799999999999875443332 36679999999886
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC-CCCCcCcEEEEcccc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK-SLPWGVDIVLYSLTK 205 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~-~~~~~~di~~~S~sK 205 (393)
|++++++.+.+++++|++++|+||||.++|+++|.++|+++ |++||+||+|+.+.... ....++|+++.|+||
T Consensus 147 ~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK 225 (423)
T 3lvm_A 147 RNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRAR-GIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHK 225 (423)
T ss_dssp TTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHH-TCEEEEECTTTTTTSCCCTTTSCCSEEEEESTT
T ss_pred CCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHHHHc-CCEEEEEhhhhcCCCCcChhhcCCCEEEechHH
Confidence 89999999998999999999999999999999999999999 99999999998755422 223578999999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHH-------hcCCCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHh
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQN-------SMGVVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLE 274 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~ 274 (393)
++ |++| +|+++++ +++.+.+..... ......+......+...++. +....++..++.+.+.+.|+
T Consensus 226 ~~-g~~g--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~ 301 (423)
T 3lvm_A 226 IY-GPKG--IGALYVR-RKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIK 301 (423)
T ss_dssp TT-SCSS--CEEEEEC-BTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hc-CCCC--eEEEEEe-ccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 87 6888 8999987 444443322111 11122333333222222222 34456666777788888888
Q ss_pred hCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCCh
Q psy12791 275 SHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPK 354 (393)
Q Consensus 275 ~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~ 354 (393)
.++++..+..+. ...++++.|.+.+ .....+.+.+.. +.+..|..++..... +.
T Consensus 302 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~--~~~~~l~~~l~~--i~v~~g~~~~~~~~~--------~~ 355 (423)
T 3lvm_A 302 DIEEVYLNGDLE--------------HGAPNILNVSFNY--VEGESLIMALKD--LAVSSGSACTSASLE--------PS 355 (423)
T ss_dssp TSTTEEEESCST--------------TBCTTEEEEEETT--SCHHHHHHHTTT--EECBCCCC-----CC--------CC
T ss_pred cCCCEEEeCCcc--------------ccCCCeEEEEeCC--CCHHHHHHHHhh--heeccCccccCCCcc--------cc
Confidence 777654322111 1124677777743 223445555554 555555443321110 01
Q ss_pred hhHhhcCCC----CCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 355 ETRDALGIT----DNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 355 ~~~~~~g~~----~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
......|.. ++++||+++...++++++.+.++|+++.
T Consensus 356 ~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~ 396 (423)
T 3lvm_A 356 YVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSI 396 (423)
T ss_dssp HHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 111122332 4899999998888888888888777553
No 102
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.96 E-value=1.5e-28 Score=233.53 Aligned_cols=318 Identities=12% Similarity=0.118 Sum_probs=212.0
Q ss_pred CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-c-EEEeccHHH-HH-HHHHHhcCCCCeEEE
Q psy12791 27 QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-H-GLCYSSGLG-AV-TAVTHLLSAGDHIIS 102 (393)
Q Consensus 27 ~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~-~i~~~~G~~-al-~~~~~~~~~gd~vl~ 102 (393)
..+.+|..+++.+.+++.+.... .|+.++.+...++|+++|+++|.+ + .+++++|++ ++ .++..++++||+|++
T Consensus 21 ~~~~~p~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~ 98 (396)
T 2ch1_A 21 MMGPGPSNCSKRVLTAMTNTVLS--NFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLI 98 (396)
T ss_dssp CCSSSSCCCCHHHHHHTTSCCCC--TTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEE
T ss_pred eecCCCCCCCHHHHHHhcccccc--CCChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEE
Confidence 36788888888888877665322 243333345789999999999987 4 687777655 57 677778899999999
Q ss_pred cCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcE
Q psy12791 103 GDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDIL 176 (393)
Q Consensus 103 ~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~ 176 (393)
++|+|++. .+...++..|++++.++.+ |++++++.+++ ++++|++++|+||||.++|+++|.++|+++ |++
T Consensus 99 ~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~-~~~ 175 (396)
T 2ch1_A 99 AVNGIWAE--RAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQH-DCL 175 (396)
T ss_dssp EESSHHHH--HHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHT-TCE
T ss_pred EcCCcccH--HHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHc-CCE
Confidence 99999863 1234667889999998863 78999998877 799999999999999999999999999999 999
Q ss_pred EEEeCccCcccccCCC-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH--------------HHhcC----
Q psy12791 177 LVLDNTFLTAYYQKSL-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL--------------QNSMG---- 237 (393)
Q Consensus 177 livDea~~~~~~~~~~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~--------------~~~~~---- 237 (393)
+|+||+|+.+.....+ ..+.|+++.|++|+++|++| +|+++++ +++++.++.. ...++
T Consensus 176 li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (396)
T 2ch1_A 176 LIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPG--ITPISIS-PKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDE 252 (396)
T ss_dssp EEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSS--CEEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSS
T ss_pred EEEEccccccCCccchhhcCcCEEEEcCCccccCCCC--eEEEEEC-HHHHHhhhhccCcccceEechHHHHHhhhhhcc
Confidence 9999999854322122 24579999999998877777 5999997 6777766421 01111
Q ss_pred -----CCCCHHHHHHHHhcc-----CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceE
Q psy12791 238 -----VVPSPFDCWLVTRGL-----KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGML 307 (393)
Q Consensus 238 -----~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 307 (393)
...+...+..+...+ +.+...+++..++++.+.+.|+++ ++. +..+. .. ...+.++
T Consensus 253 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~ 318 (396)
T 2ch1_A 253 PKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLD-IFVKD----PR--------HRLPTVT 318 (396)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCC-BSSCS----GG--------GBCTTEE
T ss_pred cCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCe-eccCC----cc--------ccCCceE
Confidence 123333333222222 234455666777778888888765 332 11111 00 0123578
Q ss_pred EEEEcCCHHHHHHHHHhcCc-cccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEe-cCCChHHHHHHHHH
Q psy12791 308 SFYVNGGAEETRIFLESLLI-FRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSV-GVEGYTDLIADLDQ 385 (393)
Q Consensus 308 ~~~~~~~~~~~~~~~~~l~~-~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~-~~~~~~~~i~~l~~ 385 (393)
+|.++. ......+.+.|.. .++.+..|..+ ..++++|+++ ++..++++++.+.+
T Consensus 319 ~~~~~~-~~~~~~~~~~L~~~~gi~v~~g~~~-----------------------~~~~~iRi~~~~~~~~~e~i~~~~~ 374 (396)
T 2ch1_A 319 GIMIPK-GVDWWKVSQYAMNNFSLEVQGGLGP-----------------------TFGKAWRVGIMGECSTVQKIQFYLY 374 (396)
T ss_dssp EEECCT-TCCHHHHHHHHHHHHCBCCBCCCGG-----------------------GTTTEEEEECCGGGCSHHHHHHHHH
T ss_pred EEEcCC-CCCHHHHHHHHHHhCCEEEecCccc-----------------------cCCCEEEEECCCCcCCHHHHHHHHH
Confidence 888741 1123344444432 24444443210 0258999999 66666777777777
Q ss_pred HHHHh
Q psy12791 386 ALRKA 390 (393)
Q Consensus 386 al~~~ 390 (393)
+|+++
T Consensus 375 ~l~~~ 379 (396)
T 2ch1_A 375 GFKES 379 (396)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 103
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.96 E-value=1.1e-28 Score=231.49 Aligned_cols=284 Identities=12% Similarity=0.121 Sum_probs=199.8
Q ss_pred chHHHHHHHHHHHhCCC--cEEEeccH-HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 59 PTRRNLERCIASLEEAK--HGLCYSSG-LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~--~~i~~~~G-~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
+...++++.+++++|.+ +.+++++| ++++ .++.++.++ +.+++..+.|.. .+...++..|++++.++.+
T Consensus 43 ~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~~---~~~~~~~~~g~~~~~v~~~~~~ 118 (362)
T 3ffr_A 43 EVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFSK---RFYEFAGELGREAYKEEAAFGK 118 (362)
T ss_dssp HHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHHH---HHHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHHH---HHHHHHHHhCCCeEEEecCCCC
Confidence 45678999999999874 55666555 4557 777778777 555555555541 2344567789999998764
Q ss_pred --CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccccccC
Q psy12791 132 --KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNG 209 (393)
Q Consensus 132 --d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK~~~G 209 (393)
|+++++ +++++++|++++|+||||.++|+++|.++|+++||+++|+|++|+.+....+.. ..|+++.|+||+++|
T Consensus 119 ~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~-~~d~~~~s~~K~~~~ 195 (362)
T 3ffr_A 119 GFYPADIT--VPADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWT-KIDSVFFSVQKCFGL 195 (362)
T ss_dssp CCCGGGCC--CCTTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTT-SCSEEEEETTSTTCC
T ss_pred CCCHHHHh--ccCCccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChh-HCcEEEEecccccCC
Confidence 677777 677899999999999999999999999999998789999999998655322222 289999999999966
Q ss_pred CCCceEEEEEecChHHHHHHHHHHHh---------------------cCCCCCHHHHHHHHhccC-----CHHHHHHHHH
Q psy12791 210 HSDVVMGATVTNDDSLQARLKFLQNS---------------------MGVVPSPFDCWLVTRGLK-----TLPCRLKEHE 263 (393)
Q Consensus 210 ~~G~r~G~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 263 (393)
++| +|+++.+ +++++.++..... .....+......+...++ .+...+++..
T Consensus 196 ~~G--~g~~~~~-~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 272 (362)
T 3ffr_A 196 PAG--LGVWILN-DRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTE 272 (362)
T ss_dssp CSC--CEEEEEE-HHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CCc--eEEEEEC-HHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 899 6888887 7888877654430 022233333222222222 2456677778
Q ss_pred HHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccC
Q psy12791 264 RGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADL 343 (393)
Q Consensus 264 ~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~ 343 (393)
++++.+.+.|+++|++.. ..+. .. ...+.+++|.+++ ....+.+.|...++.+..|..+
T Consensus 273 ~~~~~l~~~L~~~~g~~~-~~~~----~~--------~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~g~~~----- 331 (362)
T 3ffr_A 273 EKAALINTYIESSKVFSF-GVED----AK--------LRSMTTIVANTTM---LPGEINKILEPFDMAVGAGYGS----- 331 (362)
T ss_dssp HHHHHHHHHHHHCSSEEE-SSSC----GG--------GBCSSEEEEEESS---CHHHHHHHHGGGTEEEEECSGG-----
T ss_pred HHHHHHHHHHHHccCcee-ccCC----hh--------hcCCceEEEecCC---CHHHHHHHHHHCCeEEecCccc-----
Confidence 888899999998877542 1111 00 1124678898853 4556666666556666554210
Q ss_pred cccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 344 PAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+++||+|++..+++++++++.++|+++.
T Consensus 332 ------------------~~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 332 ------------------KKETQIRIANFPAHSLEQVHKLVQTLKEKI 361 (362)
T ss_dssp ------------------GTTTEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred ------------------cCCCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 125899999999999999999999998764
No 104
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.96 E-value=1.7e-28 Score=231.70 Aligned_cols=302 Identities=15% Similarity=0.111 Sum_probs=200.4
Q ss_pred CCchHHHHHHHHHHHhCCC-cEEEeccHHH-HH-HHHHHhc----CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC
Q psy12791 57 NNPTRRNLERCIASLEEAK-HGLCYSSGLG-AV-TAVTHLL----SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD 129 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~-~~i~~~~G~~-al-~~~~~~~----~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~ 129 (393)
..+..+++++.+|+++|.+ +.+++++|++ ++ .++.++. ++||+|++++++|++....+. .++..|++++.++
T Consensus 41 ~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~-~~~~~g~~~~~v~ 119 (382)
T 4hvk_A 41 AREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFEVEYIP 119 (382)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHH-HHHhcCCEEEEec
Confidence 3456779999999999987 5677777766 57 6666666 899999999999987544332 3456799999998
Q ss_pred CC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCC-CcCcEEEEcc
Q psy12791 130 LR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLP-WGVDIVLYSL 203 (393)
Q Consensus 130 ~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~-~~~di~~~S~ 203 (393)
.+ |++++++.+++++++|++++|+||||.++|+++|.++|+++ |+ +|+|++|+.+....... .++|+++.|+
T Consensus 120 ~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~-~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~ 197 (382)
T 4hvk_A 120 VGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGK-AA-LHIDATASVGQIEVDVEKIGADMLTISS 197 (382)
T ss_dssp BCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHSSS-SE-EEEECTTTBTTBCCCHHHHTCSEEEEES
T ss_pred cCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHHHHHHc-CE-EEEEhHHhcCCCCCCchhcCCCEEEEeH
Confidence 75 89999999998999999999999999999999999999999 99 99999998654322221 3689999999
Q ss_pred cccccCCCCceEEEEEecChHHHHHHHHHH-------HhcCCCCCHHHHHHHHhcc----CCHHHHHHHHHHHHHHHHHH
Q psy12791 204 TKYMNGHSDVVMGATVTNDDSLQARLKFLQ-------NSMGVVPSPFDCWLVTRGL----KTLPCRLKEHERGSIEVAKF 272 (393)
Q Consensus 204 sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~ 272 (393)
||++ |++| +|+++++++. .++... .......+......+...+ +.+....++..++++.+.+.
T Consensus 198 ~K~~-g~~g--~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~ 271 (382)
T 4hvk_A 198 NDIY-GPKG--VGALWIRKEA---KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDN 271 (382)
T ss_dssp GGGT-SCTT--CEEEEEETTC---CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhc-CCCc--eEEEEEcCcc---CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 9987 6888 7777776332 111110 0112223333333222222 22344556666777788888
Q ss_pred HhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCC
Q psy12791 273 LESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSI 352 (393)
Q Consensus 273 l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~ 352 (393)
|+.++++. +..+. ....++++.|.+++ ...+.+.+.|...++.+..|..++.....
T Consensus 272 L~~~~~~~-~~~~~-------------~~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~~-------- 327 (382)
T 4hvk_A 272 VLKIEESY-LNGHP-------------EKRLPNNVNVRFSY--IEGESIVLSLDMAGIQASTGSACSSKTLQ-------- 327 (382)
T ss_dssp HTTSTTEE-ECSCS-------------SSBCTTEEEEEETT--CCHHHHHHHHHHTTCBCBCC--------C--------
T ss_pred HhcCCCeE-EeCCc-------------cccCCCEEEEEECC--CCHHHHHHHHHHCCEEEeeCCccCCCCCc--------
Confidence 88776654 22111 01123578888853 12334455555456777776554322111
Q ss_pred ChhhHhhcCCC----CCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 353 PKETRDALGIT----DNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 353 ~~~~~~~~g~~----~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.......|.. +++||++++..+++++++.+.++|+++.
T Consensus 328 ~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~ 370 (382)
T 4hvk_A 328 PSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVI 370 (382)
T ss_dssp CCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred chHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 11112223332 5899999999888888888888877653
No 105
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.96 E-value=1.4e-27 Score=227.49 Aligned_cols=284 Identities=15% Similarity=0.110 Sum_probs=202.8
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh--cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL--LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIE 134 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~--~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~ 134 (393)
.+...++|+++|++++.++++++++|++++ .++..+ ..+||+|+++.|+|++. ...++..|++++.++.+|++
T Consensus 90 ~~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~~~l~~~~~gd~Vl~~~~~~~~~----~~~~~~~g~~~~~v~~~d~~ 165 (401)
T 2bwn_A 90 TAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASM----IEGIKRNAGPKRIFRHNDVA 165 (401)
T ss_dssp BHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHH----HHHHHHSCCCEEEECTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHHHHHhcCCCCCEEEECchhhHHH----HHHHHHcCCeEEEEcCCCHH
Confidence 357899999999999998999999999975 444333 35899999999999863 44456789999999998888
Q ss_pred HHHhhcC----CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-CC------CC--CcCcEEEE
Q psy12791 135 NLIKYIK----PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ-KS------LP--WGVDIVLY 201 (393)
Q Consensus 135 ~l~~~l~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~-~~------~~--~~~di~~~ 201 (393)
++++.+. +++++|++++|+||||.++|+++|.++|+++ |+++|+||+|+.+.+. .. .. ...+++++
T Consensus 166 ~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~ 244 (401)
T 2bwn_A 166 HLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEF-GALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNG 244 (401)
T ss_dssp HHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHH-TCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEE
T ss_pred HHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHc-CCEEEEeccccccccCCCCceeeeccCccccCcEEEe
Confidence 8888775 5789999999999999999999999999999 9999999999954321 11 01 13589999
Q ss_pred cccccccCCCCceEEEEEecChHHHHHHHHHHH--hcCCCCCHHHHHHH---HhccCCH--HHHHHHHHHHHHHHHHHHh
Q psy12791 202 SLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN--SMGVVPSPFDCWLV---TRGLKTL--PCRLKEHERGSIEVAKFLE 274 (393)
Q Consensus 202 S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~l~~~l~ 274 (393)
|+||++ |.+| ||++++ +++.+.++.... .+....++..+..+ ++.++.. ...+++..++.+.+.+.|+
T Consensus 245 s~sK~~-~~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 319 (401)
T 2bwn_A 245 TLAKAY-GVFG---GYIAAS-ARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLK 319 (401)
T ss_dssp ESSSTT-CSCC---EEEEEC-HHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred echhhc-cCCC---CEEecC-HHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 999999 5666 999987 888887764322 22222334443322 2333443 4566677777888888887
Q ss_pred hCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCC
Q psy12791 275 SHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIP 353 (393)
Q Consensus 275 ~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~ 353 (393)
+. ++. +..+ .++++++.++ +......+.+.+. ..++.+..+..+.. +
T Consensus 320 ~~-g~~-~~~~-----------------~~~~~~~~~~-~~~~~~~~~~~L~~~~gi~v~~~~~~~~---~--------- 367 (401)
T 2bwn_A 320 AL-GMP-IIDH-----------------GSHIVPVVIG-DPVHTKAVSDMLLSDYGVYVQPINFPTV---P--------- 367 (401)
T ss_dssp HH-TCC-BCCC-----------------SSSCEEEECC-CHHHHHHHHHHHHHHHCEECCEECTTTS---C---------
T ss_pred HC-CCc-ccCC-----------------CCCeEEEEeC-ChHHHHHHHHHHHhcCCEEEeecCCCCC---C---------
Confidence 64 322 1111 1458899884 3345556666663 44555544321100 0
Q ss_pred hhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 354 KETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 354 ~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
...+++|+|++..+++++++.+.++|+++.
T Consensus 368 --------~~~~~iRis~~~~~t~~~i~~~~~~l~~~~ 397 (401)
T 2bwn_A 368 --------RGTERLRFTPSPVHDLKQIDGLVHAMDLLW 397 (401)
T ss_dssp --------TTCCEEEECCCTTSCHHHHHHHHHHHHHHC
T ss_pred --------CCCceEEEEeeCCCCHHHHHHHHHHHHHHH
Confidence 013689999999999999999999998764
No 106
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.96 E-value=3.9e-28 Score=228.99 Aligned_cols=303 Identities=15% Similarity=0.141 Sum_probs=212.3
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
+.+...++|+++|++++.++.+++++|++++ .++..+ +++||+|+++.|+|++ +...++..|++++.++.+
T Consensus 36 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~ 111 (374)
T 3uwc_A 36 LGAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIA----SVGAIVQAGATPVLVDSENGY 111 (374)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHH----HHHHHHHTTCEEEEECBCTTS
T ss_pred cChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHH----HHHHHHHcCCEEEEEecCCCC
Confidence 5688999999999999999999999999998 777777 8999999999999986 455677889999999886
Q ss_pred --CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc--CCCCCcCcEEEEccc--c
Q psy12791 132 --KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ--KSLPWGVDIVLYSLT--K 205 (393)
Q Consensus 132 --d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~--~~~~~~~di~~~S~s--K 205 (393)
|++++++.+++++++|+ |+||||.+.|+++|.++|+++ |+++|+|++|+.+... .+.....|+++.|+| |
T Consensus 112 ~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~~~~i~~~~~~~-~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K 187 (374)
T 3uwc_A 112 VIDPEKIEAAITDKTKAIM---PVHYTGNIADMPALAKIAKKH-NLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLK 187 (374)
T ss_dssp SBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHT-TCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSS
T ss_pred CcCHHHHHHhCCCCceEEE---EeCCcCCcCCHHHHHHHHHHc-CCEEEEeCCCccCceeCCeeccccccEEEEeCCCCC
Confidence 89999999988888887 899999999999999999999 9999999999975432 122223699999977 9
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHHh------------cCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQNS------------MGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFL 273 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 273 (393)
++ |.+|. +|+++++++++.+.++..... .........+.+....++.+....++..++.+.+.+.|
T Consensus 188 ~l-~~~g~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l 265 (374)
T 3uwc_A 188 NL-NVWSD-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSF 265 (374)
T ss_dssp SS-CCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHT
T ss_pred cC-Cccce-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99 46564 999998877888877655421 11123556666666666667767777777778888888
Q ss_pred hhCCC-cceEeCCCCCCCcchHHHhhhcCCCc--ceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCccccc--
Q psy12791 274 ESHPC-VKGVLHPGLPSHPNHELAKSQWSGTS--GMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMT-- 348 (393)
Q Consensus 274 ~~~~~-~~~v~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~-- 348 (393)
+.++. +. .+..+.. ... ..+.+.. .+. +.+.+.|...++.+..+........+....
T Consensus 266 ~~~~~~~~---~~~~~~~-----------~~~~~~~~~~~~-~~~---~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~ 327 (374)
T 3uwc_A 266 VDLSEFID---VPVRREG-----------VYHVFHIYVLRV-KYR---DQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLG 327 (374)
T ss_dssp GGGTTTEE---CCCCCTT-----------EECCCSSEEEEE-TTH---HHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGC
T ss_pred ccCCCeEE---eccCCCC-----------CceeeEEEEEEc-CCH---HHHHHHHHHCCCccccCCCCccccChhhhhcC
Confidence 77654 32 2221100 001 2244444 233 334444444455555543222222221110
Q ss_pred --CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 349 --HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 349 --~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
....+.... ...+.+||+++..+++++++.+.++|+++.
T Consensus 328 ~~~~~~~~~~~----~~~~~lrl~~~~~~t~edi~~~~~~l~~~l 368 (374)
T 3uwc_A 328 YQQGDFPMAEK----HGEAVITLPAHPYLTEEEINYIIKKVREFY 368 (374)
T ss_dssp CCTTSCHHHHH----HHHHEEEECCCTTSCHHHHHHHHHHHHHHH
T ss_pred CccCCCccHHH----HHhCEEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 001111111 114789999999999999999999998764
No 107
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.96 E-value=1e-28 Score=230.93 Aligned_cols=312 Identities=14% Similarity=0.074 Sum_probs=208.1
Q ss_pred CCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHH-HH-HHHHHhcCCCCeEEEcCC
Q psy12791 29 VIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLG-AV-TAVTHLLSAGDHIISGDD 105 (393)
Q Consensus 29 ~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~-al-~~~~~~~~~gd~vl~~~~ 105 (393)
+.+|..+++.+.+++.+.+.. +.|. ...+...++|+++|+++|.+ +.+++++|++ ++ .++..++++||+|++++|
T Consensus 6 ~~~p~~~~~~v~~a~~~~~~~-~~~~-~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~ 83 (352)
T 1iug_A 6 TPGPVRLHPKALEALARPQLH-HRTE-AAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVY 83 (352)
T ss_dssp SSSSCCCCHHHHHHHHSCCCC-TTSH-HHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred cCCCCCCCHHHHHHhccCCCC-ccCH-HHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeC
Confidence 456666666777666554321 1111 11245689999999999987 5677765555 57 777777899999999999
Q ss_pred CccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC-CCcEEEE
Q psy12791 106 VYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH-PDILLVL 179 (393)
Q Consensus 106 ~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~liv 179 (393)
+|++.. +...++..|++++.++.+ |++++++ +++++|++++|+||||.++|+++|.++|+++ +|+++|+
T Consensus 84 ~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~ 158 (352)
T 1iug_A 84 GKFSER--FYEIALEAGLVVERLDYPYGDTPRPEDVAK---EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGA 158 (352)
T ss_dssp SHHHHH--HHHHHHHTTCEEEEEECCTTCCCCTTTSCC---SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEE
T ss_pred CchhHH--HHHHHHHcCCceEEEeCCCCCCCCHHHHhc---cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEE
Confidence 998643 344556789999998874 5565554 5789999999999999999999999999997 3899999
Q ss_pred eCccCcccccCCC-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHH---------HHHH---H--HhcCCCCCHHH
Q psy12791 180 DNTFLTAYYQKSL-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQAR---------LKFL---Q--NSMGVVPSPFD 244 (393)
Q Consensus 180 Dea~~~~~~~~~~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~---------~~~~---~--~~~~~~~~~~~ 244 (393)
|++|+.+...... ..+.|+++.|+||++.|++| +||++++ +++++. ++.. . .......+...
T Consensus 159 D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (352)
T 1iug_A 159 DMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPG--LGFVALS-PRALERLKPRGYYLDLARELKAQKEGESAWTPAINL 235 (352)
T ss_dssp ECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSC--EEEEEEC-HHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHH
T ss_pred ECCccccCcceeccccCeeEEEecCcccccCCCc--eeEEEEC-HHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHH
Confidence 9999854332122 13689999999997767777 7999997 666554 2211 1 11222333333
Q ss_pred HHHHHhcc----CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHH
Q psy12791 245 CWLVTRGL----KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRI 320 (393)
Q Consensus 245 ~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
...+...+ +.+...+++..++++.+.+.|+++ ++. +..+. ..+.+++|.++. ......
T Consensus 236 ~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~---------------~~~~~~~~~~~~-~~~~~~ 297 (352)
T 1iug_A 236 VLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG-GLR-PVPKR---------------FSPAVAAFYLPE-GVPYAR 297 (352)
T ss_dssp HHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TCE-ESCSS---------------BCTTCEEEECCT-TCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccccc---------------cCCeEEEEEcCC-CCCHHH
Confidence 32222211 225556777778888888888875 432 22110 125688888852 112344
Q ss_pred HHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 321 FLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 321 ~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.+.+...++.+..|.. + ..++++|++++..+++++++.+.++|+++.
T Consensus 298 ~~~~l~~~gi~v~~~~~------~-----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 345 (352)
T 1iug_A 298 VKEAFAQRGAVIAGGQG------P-----------------LKGKVFRLSLMGAYDRYEALGVAGMFREVL 345 (352)
T ss_dssp HHHHHHTTTEECEECCG------G-----------------GTTTEEEECCCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEEeCCC------c-----------------cCCCEEEEEccccCCHHHHHHHHHHHHHHH
Confidence 55555444665554431 0 025799999999888888888888887653
No 108
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.96 E-value=2.3e-28 Score=232.05 Aligned_cols=314 Identities=12% Similarity=0.045 Sum_probs=206.6
Q ss_pred CCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHH-HH-HHHHHhcCCCCeEEEcCCCc
Q psy12791 31 PPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLG-AV-TAVTHLLSAGDHIISGDDVY 107 (393)
Q Consensus 31 ~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~-al-~~~~~~~~~gd~vl~~~~~y 107 (393)
+|..+++.+.+++.+.+.. +.+ ........++|+++|+++|.+ +.+++++|++ ++ .++..++++||+|++++|+|
T Consensus 16 ~~~~~~~~v~~a~~~~~~~-~~~-~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~ 93 (392)
T 2z9v_A 16 GPVNAYPEVLRGLGRTVLY-DYD-PAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGV 93 (392)
T ss_dssp SCCCCCHHHHHHTTSCCCC-TTS-HHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSH
T ss_pred CCcCCCHHHHHHHhccccc-ccc-HHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCc
Confidence 4555666677666555332 111 111245788999999999986 6777766655 57 66777789999999999999
Q ss_pred cchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhc--CCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEe
Q psy12791 108 GGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYI--KPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLD 180 (393)
Q Consensus 108 ~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l--~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livD 180 (393)
++.. +...++..|++++.++.+ |++++++.+ .+++++|++++|+||||.++|+++|.++|+++ |+++|+|
T Consensus 94 ~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~li~D 170 (392)
T 2z9v_A 94 YGKG--FGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAH-GAYLIVD 170 (392)
T ss_dssp HHHH--HHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHT-TCEEEEE
T ss_pred ccHH--HHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHc-CCeEEEE
Confidence 8642 444556678899888864 789999988 45799999999999999999999999999999 9999999
Q ss_pred CccCcccccCCC-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH--------------------HhcCCC
Q psy12791 181 NTFLTAYYQKSL-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ--------------------NSMGVV 239 (393)
Q Consensus 181 ea~~~~~~~~~~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~--------------------~~~~~~ 239 (393)
++|+.+.....+ ..+.|+++.|+||++.|++| +||++++ +++++.++... ......
T Consensus 171 ~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g--~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 247 (392)
T 2z9v_A 171 AVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPG--LTMMGVS-ERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFT 247 (392)
T ss_dssp CTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSC--CEEEEEC-HHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSC
T ss_pred cccccCCcccccccccceEEEecCcccccCCCc--eeEEEEC-HHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCC
Confidence 999864432122 23689999999998767888 5999997 78777765311 011122
Q ss_pred CCHHHHHHHHhccCC-----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC
Q psy12791 240 PSPFDCWLVTRGLKT-----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG 314 (393)
Q Consensus 240 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
.+......+...++. +...+++..++++.+.+.|+++ ++. +..|. .. ...+.+++|.++.
T Consensus 248 ~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----~~--------~~~~~~~~~~~~~- 312 (392)
T 2z9v_A 248 PSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLS-VWAAS----DS--------IASPTTTAVRTPD- 312 (392)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSSS----GG--------GBCTTEEEEECCT-
T ss_pred CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCe-eccCC----cc--------ccCCceEEEECCC-
Confidence 333332222222222 3445666667777888888765 332 11111 00 0124678888841
Q ss_pred HHHHHHHHHhcCcc-ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEe-cCCChHHHHHHHHHHHHHh
Q psy12791 315 AEETRIFLESLLIF-RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSV-GVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 315 ~~~~~~~~~~l~~~-~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~-~~~~~~~~i~~l~~al~~~ 390 (393)
......+.+.|... ++.+..|..+ ..++++|+|+ +...++++++.+.++|+++
T Consensus 313 ~~~~~~l~~~L~~~~gi~v~~g~~~-----------------------~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~ 367 (392)
T 2z9v_A 313 GVDEKALRQAARARYGVVFSSGRGE-----------------------TLGKLTRIGHMGPTAQPIYAIAALTALGGA 367 (392)
T ss_dssp TCCHHHHHHHHHHHHCEECEECCGG-----------------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCEEEecCCCC-----------------------CCCCeEEEeCcccccCHHHHHHHHHHHHHH
Confidence 11233444544433 5555444321 0158999995 5467777777777777654
No 109
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.96 E-value=2.4e-28 Score=230.54 Aligned_cols=304 Identities=15% Similarity=0.099 Sum_probs=209.1
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
+.+...++|+++|+++|.++.+++++|++++ .++..+ +++||+|+++.++|.++ ...++..|++++.++.+
T Consensus 34 ~~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~ 109 (373)
T 3frk_A 34 LGDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIAT----ALAVSYTGAKPIFVEPDIRT 109 (373)
T ss_dssp SSHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHH----HHHHHHHSCEEEEECEETTT
T ss_pred CCchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHH----HHHHHHcCCEEEEEeccccc
Confidence 4688999999999999999999999999998 777777 89999999999999963 44566779999999875
Q ss_pred ---CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCc--CcEEEEccc--
Q psy12791 132 ---KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWG--VDIVLYSLT-- 204 (393)
Q Consensus 132 ---d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~--~di~~~S~s-- 204 (393)
|++++++.+++++++|+ |+||||.+.|+++|.++|+++ |+++|+|++|+.+........+ .|+++.||+
T Consensus 110 ~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~l~~i~~l~~~~-~~~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~ 185 (373)
T 3frk_A 110 YNIDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRIAKKY-NLKLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYPA 185 (373)
T ss_dssp TEECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHHHHHH-TCEEEEECTTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred cCcCHHHHHHhcCCCCeEEE---EECCCcCcccHHHHHHHHHHc-CCEEEEECCcccCCEECCEeccccccEEEEeCcCC
Confidence 88999999988888888 778999999999999999999 9999999999875432221223 689999977
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHHHHhc------------CCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKFLQNSM------------GVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKF 272 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (393)
|++ |.+| ++|+++++++++.++++...... ....++..+.+....++.+....++..++.+.+.+.
T Consensus 186 K~l-~~~g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (373)
T 3frk_A 186 KNL-GSLG-DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAG 263 (373)
T ss_dssp SSS-CCSS-SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred Ccc-Cccc-eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 4545 38999998777888777655421 112356666665555566666666666777777777
Q ss_pred HhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccC---
Q psy12791 273 LESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTH--- 349 (393)
Q Consensus 273 l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~--- 349 (393)
|+..+ + ..+..+... ......+.+.. .+.+ .+.+.|...++.++.+......+.+.....
T Consensus 264 l~~~~-~---~~~~~~~~~---------~~~~~~~~~~~-~~~~---~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~ 326 (373)
T 3frk_A 264 INNPN-V---IIPVEADYA---------KHVWYTFVIRS-EKRD---ELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFK 326 (373)
T ss_dssp CCCTT-E---ECCCCCTTE---------ECCCSSEEEEE-SSHH---HHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCC
T ss_pred hccCc-e---EeccCCCCC---------ceeeEEEEEEe-CCHH---HHHHHHHHCCCCcccCcCCccccChHHHhcCCC
Confidence 76554 2 223211100 00012345555 2333 344444444555554432222222211110
Q ss_pred -CCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 350 -KSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 350 -~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..++..+.. ..+.|||+++..+++++++.+.++|+++.
T Consensus 327 ~~~~~~~~~~----~~~~lrl~~~~~~t~~di~~~~~~l~~~~ 365 (373)
T 3frk_A 327 TGNFPIAEKI----ANEILSIPIWYGMKNEEIEYVIDKINAWK 365 (373)
T ss_dssp TTSSHHHHHH----HHHEEEECCCTTCCHHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHH----HhCEEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 011111111 14789999999999999999999998764
No 110
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.96 E-value=1.1e-28 Score=231.64 Aligned_cols=315 Identities=13% Similarity=0.122 Sum_probs=210.4
Q ss_pred CCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC---cEEEeccH-HHHH-HHHHHhcCCCCeEEEc
Q psy12791 29 VIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK---HGLCYSSG-LGAV-TAVTHLLSAGDHIISG 103 (393)
Q Consensus 29 ~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~---~~i~~~~G-~~al-~~~~~~~~~gd~vl~~ 103 (393)
+.+|+.+++.+.+++.+.+. +.|..+..+...++|+++|+++|.+ +.+++++| ++++ .++..++++||+|++.
T Consensus 9 ~~gp~~~~~~v~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~ 86 (366)
T 1m32_A 9 TPGPLTTSRTVKEAMLFDSC--TWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIV 86 (366)
T ss_dssp SSSSCCCCHHHHHTTCCCCC--TTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEE
T ss_pred cCCCcCCCHHHHHHHhhhhc--CCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEE
Confidence 44477777888887766521 2222111267889999999999954 24555555 5567 7777788899998877
Q ss_pred C-CCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC--CCcEEEEecCCCCcccccCHHHHHHHHHhCCCc
Q psy12791 104 D-DVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP--NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDI 175 (393)
Q Consensus 104 ~-~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~ 175 (393)
+ ++|++. +...++..|++++.++.+ |++++++.+++ ++++|++++|+||||.++|+++|.++|+++ |+
T Consensus 87 ~~~~~~~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~ 162 (366)
T 1m32_A 87 SNGAYGAR---MVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRY-GK 162 (366)
T ss_dssp ESSHHHHH---HHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHH-TC
T ss_pred eCCCccHH---HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHc-CC
Confidence 6 555532 445567779899888763 78999988865 488999999999999999999999999999 99
Q ss_pred EEEEeCccCcccccCCCC-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH------------H---Hh---c
Q psy12791 176 LLVLDNTFLTAYYQKSLP-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL------------Q---NS---M 236 (393)
Q Consensus 176 ~livDea~~~~~~~~~~~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~------------~---~~---~ 236 (393)
++|+||+|+.+.....+. .++|+++.|+||+++|+.| +||++++ +++++.++.. . .. .
T Consensus 163 ~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (366)
T 1m32_A 163 TYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPG--FAFVIAR-EQKLAACKGHSRSLSLDLYAQWRCMEDNHGKW 239 (366)
T ss_dssp EEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSS--EEEEEEE-HHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCC
T ss_pred EEEEECCccccCcCccccccCccEEEecCcccccCCCc--eEEEEEC-HHHHHhhcCCCCCccccHHHHHhhhcccCCCC
Confidence 999999998654322222 4689999999998866777 6999998 6776654321 0 00 0
Q ss_pred CCCCCHHHHHHHHhccCC------HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEE
Q psy12791 237 GVVPSPFDCWLVTRGLKT------LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFY 310 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
....+......+...++. +...+++..++.+.+.+.|+++ ++. +..+. . ...+.++++.
T Consensus 240 ~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~-----~--------~~~~~~~~~~ 304 (366)
T 1m32_A 240 RFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFN-TLLDD-----E--------LHSPIITAFY 304 (366)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCG-----G--------GBCSSEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCe-eccCc-----h--------hcCceEEEEE
Confidence 123444443333333322 3445666677778888888765 332 11110 0 0123578888
Q ss_pred EcCC-HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 311 VNGG-AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 311 ~~~~-~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
++.. ......+.+.+...++.+..|..+ .++++|++++..+++++++.+.++|++
T Consensus 305 ~~~~~~~~~~~~~~~l~~~gi~v~~~~~~------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~ 360 (366)
T 1m32_A 305 SPEDPQYRFSEFYRRLKEQGFVIYPGKVS------------------------QSDCFRIGNIGEVYAADITALLTAIRT 360 (366)
T ss_dssp CCCCTTCCHHHHHHHHHHTTEECEECCCS------------------------SSCEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred cCccCCCCHHHHHHHHHHCCEEEECCcCC------------------------CCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence 8520 122344555554445555444321 157999999999999999999999987
Q ss_pred hh
Q psy12791 390 AC 391 (393)
Q Consensus 390 ~~ 391 (393)
+.
T Consensus 361 ~~ 362 (366)
T 1m32_A 361 AM 362 (366)
T ss_dssp HC
T ss_pred HH
Confidence 64
No 111
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.96 E-value=9.1e-29 Score=235.65 Aligned_cols=318 Identities=15% Similarity=0.103 Sum_probs=199.5
Q ss_pred CCCCC-CCCCCCCccCCeeeeCCCCCCC------CCccccCCCCchHHHHHHHHHHH--hC-CC-cEEEeccHHHH-HHH
Q psy12791 22 DQWRS-QCVIPPIILSTTFKQNTPGQPP------QGFEYSRSNNPTRRNLERCIASL--EE-AK-HGLCYSSGLGA-VTA 89 (393)
Q Consensus 22 ~~~~~-~~~~~p~~~~~~~~~~~~~~~~------~~~~y~~~~~~~~~~lr~~la~~--~~-~~-~~i~~~~G~~a-l~~ 89 (393)
.++++ +.+.+++.+++.+.+++.+.+. ..+.|+ +..+..++|+++|++ .| .+ +.|++++|+++ +.+
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~--~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~ 110 (400)
T 3asa_A 33 HTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYG--PDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFR 110 (400)
T ss_dssp SCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCC--CTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHH
T ss_pred CceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCC--CCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHH
Confidence 35666 6677766666655554322110 122333 245778999999999 47 43 78888888776 644
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE-EEeeCCCCHHHHHhhcC--CCCcEEEEecCCCCcccccC---HH
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE-VDFVDLRKIENLIKYIK--PNTKMVWIENPTNPLMTVFD---VK 163 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~-v~~~~~~d~~~l~~~l~--~~~~~v~l~~p~nptG~~~~---~~ 163 (393)
+..++.+||+|+++.|+|++ +...++..|.+ ++.++.++-+.+...+. +++++|++++||||||.++| ++
T Consensus 111 ~~~~~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~ 186 (400)
T 3asa_A 111 LLSFFGPNQTVAIQDPSYPA----YLDIARLTGAKEIIALPCLQENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLR 186 (400)
T ss_dssp HHHHHCSSCEEEEEESCCHH----HHHHHHHTTCSEEEEEECCGGGTTCCCCCTTCCCSEEEEESSCTTTCCCCCHHHHH
T ss_pred HHHHcCCCCEEEECCCCcHH----HHHHHHHcCCcceEecccchhcCcccChhhccCccEEEEeCCCCCCCCcCCHHHHH
Confidence 56667899999999999985 55566778988 88887752111111121 46899999999999999998 56
Q ss_pred HHHHHHHhCCCcEEEEeCccCcccccC--C--C-CC----cCcEEEEcccccccCCCCceEEEEEecChHH-------HH
Q psy12791 164 AISAVVKQHPDILLVLDNTFLTAYYQK--S--L-PW----GVDIVLYSLTKYMNGHSDVVMGATVTNDDSL-------QA 227 (393)
Q Consensus 164 ~l~~l~~~~~~~~livDea~~~~~~~~--~--~-~~----~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~-------~~ 227 (393)
+|.++|+++ |+++|+||+|..+.... + + .. +++++++|+||++ |++|+|+||++++ +++ ++
T Consensus 187 ~l~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~GlriG~~~~~-~~~~~~~~~~~~ 263 (400)
T 3asa_A 187 AIVHYAIEH-EILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPL-GFAGIRLGWTVIP-QELTYADGHFVI 263 (400)
T ss_dssp HHHHHHHHT-TCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGG-TTTTCCCEEEECC-TTCBCTTSCBHH
T ss_pred HHHHHHHHc-CCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhc-CCcchheeEEeeC-hhhccchhhhHH
Confidence 788889999 99999999999654321 1 1 11 2469999999999 6999999999997 555 45
Q ss_pred HHHH-HHHhcCCCCCHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCc
Q psy12791 228 RLKF-LQNSMGVVPSPFDCWLVTRGLK--TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTS 304 (393)
Q Consensus 228 ~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~ 304 (393)
.+.. .........+...+..+...++ .+...++.+.++.+.+.+.|++. ++. +..+. .+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----------------~~ 325 (400)
T 3asa_A 264 QDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT-GFE-VFGGE----------------HA 325 (400)
T ss_dssp HHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT-TCE-EEECS----------------SS
T ss_pred HHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC-CCe-eeCCC----------------Cc
Confidence 4432 2222222344444433332221 33445666777788888888765 333 22121 14
Q ss_pred ceEEEE-EcCCHHHHHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHH
Q psy12791 305 GMLSFY-VNGGAEETRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIAD 382 (393)
Q Consensus 305 ~~~~~~-~~~~~~~~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~ 382 (393)
.++++. ++.. .....+.+.+ +..++.+..|..+... .++++|||+ ..++++++.
T Consensus 326 ~~~~~~~~~~~-~~~~~~~~~l~~~~gv~v~~g~~f~~~---------------------~~~~iRis~--~~~~e~i~~ 381 (400)
T 3asa_A 326 PYLWVKPTQAN-ISDRDLFDFFLREYHIAITPGIGFGRS---------------------GSGFVRFSS--LGKREDILA 381 (400)
T ss_dssp SEEEEECCCTT-CCTTTHHHHHHHHHSEECEEGGGGCGG---------------------GTTCEEEEC--CSCHHHHHH
T ss_pred eEEEEeccCCC-CCHHHHHHHHHHhCCEEEeChhHhCCC---------------------CCCEEEEEe--eCCHHHHHH
Confidence 678888 7421 1111233332 2225555555433210 157899994 456666776
Q ss_pred HHHHHHHh
Q psy12791 383 LDQALRKA 390 (393)
Q Consensus 383 l~~al~~~ 390 (393)
+.++|+++
T Consensus 382 ~l~~l~~~ 389 (400)
T 3asa_A 382 ACERLQMA 389 (400)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHH
Confidence 66666544
No 112
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.96 E-value=5e-28 Score=226.99 Aligned_cols=318 Identities=17% Similarity=0.033 Sum_probs=212.9
Q ss_pred CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCe--EEEc
Q psy12791 27 QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDH--IISG 103 (393)
Q Consensus 27 ~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~--vl~~ 103 (393)
..++||+++++.+.+++.+.... ..| ++++...+|++++|++++.+..+++++|++++ .++..++.+||. |+++
T Consensus 19 ~~~~~~~g~~p~v~~ai~~~~~~-~~~--~~~~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~ 95 (359)
T 3pj0_A 19 GNGPRNVGVLTEALQNIDDNLES-DIY--GNGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYH 95 (359)
T ss_dssp SSSCCBHHHHHHHTTTSCTTCBC-CBT--TBSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCCccccCCCHHHHHHHHhhccc-Ccc--cCCHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 57889998888888888765322 223 24688999999999999998888999999887 777777788886 5555
Q ss_pred CCCccchHHHHHHhcccCCcEEEeeCCC----CHHHHHhhcCCCCcEEEEecCCCCc-ccccCHHHH---HHHHHhCCCc
Q psy12791 104 DDVYGGTYRYFAQVAPKIGLEVDFVDLR----KIENLIKYIKPNTKMVWIENPTNPL-MTVFDVKAI---SAVVKQHPDI 175 (393)
Q Consensus 104 ~~~y~~~~~~~~~~~~~~g~~v~~~~~~----d~~~l~~~l~~~~~~v~l~~p~npt-G~~~~~~~l---~~l~~~~~~~ 175 (393)
.+.|...+ .........|++++.++.+ |+++++++ .+++++|++++|+||+ |.++|.+++ .++|+++ |+
T Consensus 96 ~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~-~~ 172 (359)
T 3pj0_A 96 PLSHLEIH-EQDGLKELQQITPLLLGTANQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQ-GI 172 (359)
T ss_dssp TTCHHHHS-STTHHHHHHCCEEEECSCTTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHH-TC
T ss_pred ccceeeeh-hcchHHHhcCceEEecCCcCCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHc-CC
Confidence 55543210 0011123468999998875 78999988 7789999999999998 799885555 9999999 99
Q ss_pred EEEEeCccCcccc---cCC---CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCC--CHHHHHH
Q psy12791 176 LLVLDNTFLTAYY---QKS---LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVP--SPFDCWL 247 (393)
Q Consensus 176 ~livDea~~~~~~---~~~---~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 247 (393)
+||+|++|..+.. ..+ +..+.|+++.|+||+++|+ + +||++++ +++++.++......+... ....+..
T Consensus 173 ~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~-~--gg~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~a 248 (359)
T 3pj0_A 173 SLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGI-A--GAILAGN-DDFVQEAKIWKRRYGGDLISLYPYILS 248 (359)
T ss_dssp EEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCS-S--CEEEEEC-HHHHHHHHHHHHHTTCCCSCCHHHHHH
T ss_pred EEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCc-c--eEEEECC-HHHHHHHHHHHHHhCCCcchhHHHHHH
Confidence 9999999875431 111 1135689999999998544 3 3888876 899998877655444322 2222222
Q ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH-HHHHHHHHhcC
Q psy12791 248 VTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA-EETRIFLESLL 326 (393)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ 326 (393)
+...++....++++..++.+.+.+.|++++++.....|. .++++++.++... ...+.+.+.+.
T Consensus 249 ~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~l~~~l~ 312 (359)
T 3pj0_A 249 ADYYFEKRIGKMAEYFEAAKGLAERFNSCSGVKTVPEVP----------------VSNMFHVYFENSADEIGAILTKIQD 312 (359)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHTSTTEEEESSSC----------------SSSEEEEEESSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhhCCCceeeccCC----------------cceEEEEEecCccchhHHHHHHHHH
Confidence 222222222345566777888999999887764222222 2567888885332 34566667776
Q ss_pred ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 327 IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 327 ~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..++.+..|..+.. + ..+++|++++........+.+.++++.+.
T Consensus 313 ~~GV~v~~g~~~~~---~------------------~~~~~r~~i~~~~~~~~~e~l~~~l~~l~ 356 (359)
T 3pj0_A 313 ETGVGISGYLQEKS---A------------------DVCAFEVSVGDAFAEIPAKNLELVFRCLE 356 (359)
T ss_dssp HHCEECCSCCEEEE---T------------------TEEEEEEECCTTGGGSCHHHHHHHHHHHH
T ss_pred hcCcEecCCccccC---C------------------CceEEEEEecCccccCCHHHHHHHHHHHH
Confidence 66777776643211 0 14789999986654444455555555543
No 113
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.96 E-value=9.5e-28 Score=231.70 Aligned_cols=293 Identities=14% Similarity=0.117 Sum_probs=193.8
Q ss_pred CchHHHHHHHHHHHh------CCC-cEEEeccHHHH-H-HHHHHhcCCCC--------------eEEEc-CCCccchHHH
Q psy12791 58 NPTRRNLERCIASLE------EAK-HGLCYSSGLGA-V-TAVTHLLSAGD--------------HIISG-DDVYGGTYRY 113 (393)
Q Consensus 58 ~~~~~~lr~~la~~~------~~~-~~i~~~~G~~a-l-~~~~~~~~~gd--------------~vl~~-~~~y~~~~~~ 113 (393)
..+..++|+++|+++ +++ ++|++|+|+++ + .++..++++|| +|+++ .|+|..
T Consensus 82 ~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~---- 157 (444)
T 3if2_A 82 PQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIG---- 157 (444)
T ss_dssp TTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGG----
T ss_pred CCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccc----
Confidence 456789999999987 333 66777777664 7 66777888888 78876 899985
Q ss_pred HHH------hcccCCcEEEeeCCC----------CHHHHHhh---cCCCCcEEEEecCCCCcccccC---HHHHHHHHHh
Q psy12791 114 FAQ------VAPKIGLEVDFVDLR----------KIENLIKY---IKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQ 171 (393)
Q Consensus 114 ~~~------~~~~~g~~v~~~~~~----------d~~~l~~~---l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~ 171 (393)
+.. .+...|..++.++.+ |+++++++ +.+++++|++++||||||.++| +++|.++|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~ 237 (444)
T 3if2_A 158 YSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKR 237 (444)
T ss_dssp GTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred hhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 333 345678888777632 78999988 6778999999999999999999 8889999999
Q ss_pred CCCcEEEEeCccCccccc---CC---CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHH
Q psy12791 172 HPDILLVLDNTFLTAYYQ---KS---LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDC 245 (393)
Q Consensus 172 ~~~~~livDea~~~~~~~---~~---~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (393)
+ |+++|+||+|+.+... .. ...+.++++.|+||+ +.+|+|+||++++ +++.+.+.......+...++..+
T Consensus 238 ~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~--~~~G~r~G~~~~~-~~l~~~~~~~~~~~~~~~~~~~~ 313 (444)
T 3if2_A 238 Y-DIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI--GLPGMRTGIIVAD-AKVIEAVSAMNAVVNLAPTRFGA 313 (444)
T ss_dssp T-TCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT--TCGGGCCEEEECC-HHHHHHHHHHHHHHHSSCCCHHH
T ss_pred C-CCEEEEECCCCCcccccccccccccCCCCEEEEechhhc--cCCCCceEEEEEC-HHHHHHHHHHHHhccCCCChHHH
Confidence 9 9999999999863321 11 123678999999995 4899999999987 88888887766554444444444
Q ss_pred HHHHhccCC--HH----H-HHHHHHHHHHHHHHHHhh-CCCcc-eEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHH
Q psy12791 246 WLVTRGLKT--LP----C-RLKEHERGSIEVAKFLES-HPCVK-GVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAE 316 (393)
Q Consensus 246 ~~~~~~~~~--~~----~-~~~~~~~~~~~l~~~l~~-~~~~~-~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
..+...++. +. . ..+.+.++.+.+.+.|.+ ++.+. .+..|. .+.++++.++....
T Consensus 314 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----------------~g~~~~~~~~~~~~ 377 (444)
T 3if2_A 314 AIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPE----------------GAIFLWLWFKDLPI 377 (444)
T ss_dssp HHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCC----------------BSSEEEEEETTCSS
T ss_pred HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCC----------------ccEEEEEEcCCCCC
Confidence 443333322 11 1 233445566667777754 44421 122222 24678888852112
Q ss_pred HHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 317 ETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
..+.+.+.+...++.+..|..|+....... .....++||||++. ++++++.+.+.|.+
T Consensus 378 ~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~-------------~~~~~~~iRis~~~--~~e~i~~~l~~l~~ 435 (444)
T 3if2_A 378 STLDLYERLKAKGTLIVPSEYFFPGVDVSD-------------YQHAHECIRMSIAA--DEQTLIDGIKVIGE 435 (444)
T ss_dssp CHHHHHHHHHHTTEECEEGGGSCTTCCCTT-------------CSGGGSEEEEESSS--CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCeEEecchhhcCCCCCcc-------------cccCCCeEEEEEeC--CHHHHHHHHHHHHH
Confidence 334455555555777777665432110000 00014799999998 55555555555544
No 114
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.96 E-value=4.2e-28 Score=231.97 Aligned_cols=315 Identities=11% Similarity=0.125 Sum_probs=208.1
Q ss_pred CCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-c-EE-EeccHHHHH-HHHHHhcCCCCeEEEcC
Q psy12791 29 VIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-H-GL-CYSSGLGAV-TAVTHLLSAGDHIISGD 104 (393)
Q Consensus 29 ~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~-~i-~~~~G~~al-~~~~~~~~~gd~vl~~~ 104 (393)
...|...++.+.+.+.+.. ...|.....+...++++.+++++|.+ + .+ +.++|++++ .++..++++||+|++++
T Consensus 16 ~p~p~~~~~~v~~a~~~~~--~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~ 93 (416)
T 3isl_A 16 TPGPVEVDPRVLRVMSTPV--VGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPI 93 (416)
T ss_dssp SSSSCCCCHHHHHHTTSCC--CCTTSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred cCCCcCcCHHHHHHhcccC--CCCccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEec
Confidence 3445555555665554431 11222112355789999999999987 3 33 345566778 77778899999999999
Q ss_pred CCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEE
Q psy12791 105 DVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLV 178 (393)
Q Consensus 105 ~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~li 178 (393)
++|++.. +...++..|++++.++.+ |+++++++++ +++++|++++|+||||.+.|+++|.++|+++ |+++|
T Consensus 94 ~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~li 170 (416)
T 3isl_A 94 YGRFGYL--LTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTE-DALFI 170 (416)
T ss_dssp SSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHT-TCEEE
T ss_pred CCcccHH--HHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHc-CCEEE
Confidence 9997532 556678889999999886 8999999997 5899999999999999999999999999999 99999
Q ss_pred EeCccCcccccCCC-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH------------------------
Q psy12791 179 LDNTFLTAYYQKSL-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ------------------------ 233 (393)
Q Consensus 179 vDea~~~~~~~~~~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~------------------------ 233 (393)
+|++|+.+...... ..++|+++.|+||++.|++| +|+++++ +++++.+....
T Consensus 171 ~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g--~g~~~~~-~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~ 247 (416)
T 3isl_A 171 VDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSG--MAPITYN-ERVADVIAARKKVERGIATQADRAALSGNRPITSN 247 (416)
T ss_dssp EECTTTTTTSCCCTTTTTCSEEECCSSSTTCCCSS--EEEEEEC-HHHHHHHHTC------------------CCCCSCS
T ss_pred EECCccccCCCcchhhcCCCEEEecCccccCCCCC--eEEEEEC-HHHHHHhhccccccccccccccchhccCCCCCCcc
Confidence 99999865432222 24789999999998657777 8999997 78877775321
Q ss_pred --------H------hcCCCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchH
Q psy12791 234 --------N------SMGVVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHE 294 (393)
Q Consensus 234 --------~------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~ 294 (393)
. ......+......+...++ .+...+++..++++.+.+.|++. ++. +..+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-------- 317 (416)
T 3isl_A 248 YFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM-GLR-LFGDD-------- 317 (416)
T ss_dssp TTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BCSCG--------
T ss_pred ccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCE-eccCc--------
Confidence 0 0111223333222222221 14455666677778888888763 332 11111
Q ss_pred HHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc-ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecC
Q psy12791 295 LAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF-RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV 373 (393)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~ 373 (393)
....+.++++.++. ......+.+.|... ++.+..|.. ...++++|++++.
T Consensus 318 -----~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~gi~v~~g~~-----------------------~~~~~~iRi~~~~ 368 (416)
T 3isl_A 318 -----SCKMPVVTCVEIPG-GIDGESVRDMLLAQFGIEIASSFG-----------------------PLAGKIWRIGTMG 368 (416)
T ss_dssp -----GGBCTTEEEEECCT-TCCHHHHHHHHHHHHCEECBCCCS-----------------------TTTTTEEEEECCG
T ss_pred -----cccCCcEEEEeCCC-CCCHHHHHHHHHHhCCEEEecCCC-----------------------CCCCCEEEEeccc
Confidence 01124678888842 12233455554332 555554421 0126899999965
Q ss_pred CChHHH-HHHHHHHHHHh
Q psy12791 374 EGYTDL-IADLDQALRKA 390 (393)
Q Consensus 374 ~~~~~~-i~~l~~al~~~ 390 (393)
..++++ ++.+.++|+++
T Consensus 369 ~~~~~e~i~~~~~~l~~~ 386 (416)
T 3isl_A 369 YSCRKENVLFVLAGLEAV 386 (416)
T ss_dssp GGCSHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHH
Confidence 544444 77777777654
No 115
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.96 E-value=1.1e-28 Score=230.58 Aligned_cols=311 Identities=14% Similarity=0.094 Sum_probs=208.5
Q ss_pred CCCCCccCCeeeeCCCCCCCCCccccCCCC--chHHHHHHHHHHHhCCC---cEEEeccHHH-HH-HHHHHhcCCCCeEE
Q psy12791 29 VIPPIILSTTFKQNTPGQPPQGFEYSRSNN--PTRRNLERCIASLEEAK---HGLCYSSGLG-AV-TAVTHLLSAGDHII 101 (393)
Q Consensus 29 ~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~--~~~~~lr~~la~~~~~~---~~i~~~~G~~-al-~~~~~~~~~gd~vl 101 (393)
+.+|..+++.+.+++.+.+.. + +++. ....++|+++|+++|.+ +.+++++|++ ++ .++..+++ |+|+
T Consensus 5 ~~gp~~~~~~v~~a~~~~~~~-~---~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl 78 (353)
T 2yrr_A 5 TPGPTPIPERVQKALLRPMRG-H---LDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR--GPVL 78 (353)
T ss_dssp SSSSCCCCHHHHGGGGSCCCC-T---TCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEE
T ss_pred CCCCCCCCHHHHHHHhccccc-c---cCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEE
Confidence 456777777777777665432 2 2222 44789999999999984 6787777755 57 55555555 8999
Q ss_pred EcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCc
Q psy12791 102 SGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDI 175 (393)
Q Consensus 102 ~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~ 175 (393)
+++++|++. .+...++..|++++.++.+ |++++++.+++ ++++|++++|+||||.++|+++|.++|+++ |+
T Consensus 79 ~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~-~~ 155 (353)
T 2yrr_A 79 VLVNGAFSQ--RVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEA-GA 155 (353)
T ss_dssp EEECSHHHH--HHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHH-TC
T ss_pred EEcCCCchH--HHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHc-CC
Confidence 999998864 2455667789999998864 78999998877 799999999999999999999999999999 99
Q ss_pred EEEEeCccCcccccCCCC-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH----------HH---H--HhcCCC
Q psy12791 176 LLVLDNTFLTAYYQKSLP-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK----------FL---Q--NSMGVV 239 (393)
Q Consensus 176 ~livDea~~~~~~~~~~~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~----------~~---~--~~~~~~ 239 (393)
++|+|++|+.+....++. .+.|+++.|++|+++|++| +||++++ +++++.++ .. . ......
T Consensus 156 ~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g--~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (353)
T 2yrr_A 156 LFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPG--LAPIAAS-LEARKAFTGKRGWYLDLARVAEHWERGGYHHT 232 (353)
T ss_dssp EEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSS--CEEEEEC-HHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSC
T ss_pred eEEEEcCcccccccccccccCceEEEecCcccccCCCc--eEEEEEC-HHHHHHhccCCCccccHHHHhhhhhcCCCCCC
Confidence 999999997543211111 3579999999998767888 7999998 77776553 00 1 111223
Q ss_pred CCHHHHHHHHhccCC-----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC
Q psy12791 240 PSPFDCWLVTRGLKT-----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG 314 (393)
Q Consensus 240 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (393)
.+......+...++. +...+++..++++.+.+.|++. ++. +..+. ...+.+++|.++.
T Consensus 233 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~--------------~~~~~~~~~~~~~- 295 (353)
T 2yrr_A 233 TPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFR-PYPKA--------------SPLPTVLVVRPPE- 295 (353)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCE-ESCSS--------------SBCTTEEEEECCT-
T ss_pred CCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCc-cccCc--------------cCCCeEEEEECCC-
Confidence 344333322222222 4445666777788888888775 432 21111 0124567888741
Q ss_pred HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHH-HHHHHHHHhh
Q psy12791 315 AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIA-DLDQALRKAC 391 (393)
Q Consensus 315 ~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~-~l~~al~~~~ 391 (393)
....+.+.+.+...++.+..|..+ ..++++|+|++...++++++ .+.++|+++.
T Consensus 296 ~~~~~~~~~~l~~~gi~v~~g~~~-----------------------~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l 350 (353)
T 2yrr_A 296 GVDADRLVRALYAEGVAVAGGIGP-----------------------TRGQVLRLGLMGEGARREAYQAFLKALDRAL 350 (353)
T ss_dssp TCCHHHHHHHHHHTTEECEECCGG-----------------------GTTTCEEEECSGGGSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCEEEeCCccc-----------------------cCCCeEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 112334555554445555554321 01578999997666666666 8888887654
No 116
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.96 E-value=7.6e-29 Score=235.97 Aligned_cols=306 Identities=16% Similarity=0.132 Sum_probs=192.0
Q ss_pred cCCCCchHHHHHHHHHHHhCCC-cEEEeccHHH-HH-HHHHHhc----CCCC-eEEEcCCCccchHHHHHHhcccCCcEE
Q psy12791 54 SRSNNPTRRNLERCIASLEEAK-HGLCYSSGLG-AV-TAVTHLL----SAGD-HIISGDDVYGGTYRYFAQVAPKIGLEV 125 (393)
Q Consensus 54 ~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~-al-~~~~~~~----~~gd-~vl~~~~~y~~~~~~~~~~~~~~g~~v 125 (393)
+++..+...++++.+|+++|.+ +.+++++|++ ++ .++..++ ++|| +|+++.++|++....+.. +...|+++
T Consensus 58 ~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~-~~~~g~~~ 136 (400)
T 3vax_A 58 GIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEH-LAGRGFEV 136 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHH-HHTTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHH-HHhcCCeE
Confidence 3333456789999999999987 5666666655 57 6666666 8999 999999999876544443 35679999
Q ss_pred EeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEE
Q psy12791 126 DFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIV 199 (393)
Q Consensus 126 ~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~ 199 (393)
+.++.+ |++++++++.+++++|++++|+||||.++|+++|.++|+++ |+++|+|++|+.+...... .. .|++
T Consensus 137 ~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~-~~~li~D~a~~~~~~~~~~~~~-~d~~ 214 (400)
T 3vax_A 137 DFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELAQQLRAT-PTYLHVDAAQGYGKVPGDLTTP-IDMI 214 (400)
T ss_dssp EEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTS-SCEEEEECTTTTTTSGGGGGSC-CSEE
T ss_pred EEEccCCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcHHHHHHHHHhc-CCEEEEEhhhhcCCCCcChhhc-CcEE
Confidence 999886 89999999998999999999999999999999999999999 9999999999865432221 12 8999
Q ss_pred EEcccccccCCCCceEEEEE-ecChHHH---HHHHHHH-------HhcCCCCCHHHHHHHHhcc----CCHHHHHHHHHH
Q psy12791 200 LYSLTKYMNGHSDVVMGATV-TNDDSLQ---ARLKFLQ-------NSMGVVPSPFDCWLVTRGL----KTLPCRLKEHER 264 (393)
Q Consensus 200 ~~S~sK~~~G~~G~r~G~~~-~~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 264 (393)
+.|+||++ |++| +|+++ ++++++. ..+.... .......+......+...+ +.+...+++..+
T Consensus 215 ~~s~~K~~-g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 291 (400)
T 3vax_A 215 SISGHKIG-APKG--VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQD 291 (400)
T ss_dssp EEETGGGT-SCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred EEeHHHhC-CCCc--eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 99999976 6777 77777 7642221 1111100 1112233333333222222 234556666677
Q ss_pred HHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCc
Q psy12791 265 GSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLP 344 (393)
Q Consensus 265 ~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~ 344 (393)
+++.+.+.|+ .+++. +..+. ....++++.+.+++ ...+.+.+.|. .++.+..|..++.....
T Consensus 292 ~~~~l~~~L~-~~~~~-~~~~~-------------~~~~~~~~~~~~~~--~~~~~l~~~L~-~gi~v~~g~~~~~~~~~ 353 (400)
T 3vax_A 292 LRSRLLAGLA-STSFQ-VNGDQ-------------DHVVPHILNLSFED--VDAEAFLVTLK-DLVAVATGSASTSASFT 353 (400)
T ss_dssp HHHHHHHHHT-TTTCE-ECSCT-------------TSBCTTEEEEECTT--CCHHHHHHHHH-HHHHHTTTTEEEEEEEC
T ss_pred HHHHHHHhhC-CCCEE-EeCCc-------------ccCCCCEEEEEeCC--CCHHHHHHHHh-cCcEEEecccccCCCCC
Confidence 7778888887 66543 22111 01124678888753 23445566666 67877777655432111
Q ss_pred ccccCCCCChhhHhhcCCC----CCeEEEEe-cCCChHHHHHHHHHHHHHhh
Q psy12791 345 AEMTHKSIPKETRDALGIT----DNLVRLSV-GVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~g~~----~~~iRls~-~~~~~~~~i~~l~~al~~~~ 391 (393)
+.......|.. +++||||+ +..+++++++.+.++|+++.
T Consensus 354 --------~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~ 397 (400)
T 3vax_A 354 --------PSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLK 397 (400)
T ss_dssp --------CHHHHHTTTCCHHHHTSEEEEEEEEC------------------
T ss_pred --------ccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHh
Confidence 11122223333 48999999 99999988999888887764
No 117
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.92 E-value=7.3e-31 Score=249.44 Aligned_cols=317 Identities=16% Similarity=0.157 Sum_probs=211.5
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHh----C--C-CcEEEeccHHHH-H-HHHHH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLE----E--A-KHGLCYSSGLGA-V-TAVTH 92 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~----~--~-~~~i~~~~G~~a-l-~~~~~ 92 (393)
+++| +.+.+++.+++.+.+++.+.+... ...|+++ ..++|+++|+++ | . ++.+++++|+++ + .++..
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~ 108 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQL--VYGYTYA-SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQA 108 (392)
Confidence 5567 677778888888888776654321 2233344 778999998875 3 2 267888888665 7 66777
Q ss_pred hcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--------CHHHHHhhcC-CCCcEEEEecCCCCcccccC--
Q psy12791 93 LLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--------KIENLIKYIK-PNTKMVWIENPTNPLMTVFD-- 161 (393)
Q Consensus 93 ~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--------d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~-- 161 (393)
++++||+|+++.|+|++ +...++..|.+++.++.+ |++++++.+. +++++|++++|+||||.+++
T Consensus 109 ~~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~ 184 (392)
T 3b1d_A 109 FTKEGEAVLINSPVYPP----FARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWERE 184 (392)
Confidence 78899999999999985 556677889998888762 6778888887 57899999999999999997
Q ss_pred -HHHHHHHHHhCCCcEEEEeCccCcccccC----CC----C--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH
Q psy12791 162 -VKAISAVVKQHPDILLVLDNTFLTAYYQK----SL----P--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK 230 (393)
Q Consensus 162 -~~~l~~l~~~~~~~~livDea~~~~~~~~----~~----~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~ 230 (393)
+++|.++|+++ |+++|+||+|..+.+.. ++ . .+.+++++|+||++ |++|+|+||++++++++++.++
T Consensus 185 ~l~~l~~~~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~ 262 (392)
T 3b1d_A 185 VLEQIGHLCQKH-HVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTF-NIAGTKNSYAIIENPTLCAQFK 262 (392)
Confidence 88899999999 99999999999865321 11 1 34569999999999 6899999999997566888877
Q ss_pred HHHHhcC-CCCCHHHHHHHHhccCC----HHHHHHHHHHHHHHHHHHHhh-CCCcceEeCCCCCCCcchHHHhhhcCCCc
Q psy12791 231 FLQNSMG-VVPSPFDCWLVTRGLKT----LPCRLKEHERGSIEVAKFLES-HPCVKGVLHPGLPSHPNHELAKSQWSGTS 304 (393)
Q Consensus 231 ~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~-~~~~~~v~~~~l~~~~~~~~~~~~~~~~~ 304 (393)
.....++ ...++..+..+...++. +...++...++.+.+.+.|++ +|++..+ .+ .+
T Consensus 263 ~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~-----------------~~ 324 (392)
T 3b1d_A 263 HQQLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVM-KP-----------------QG 324 (392)
Confidence 6555442 22344444433333322 233344455566666666665 4443211 11 13
Q ss_pred ce-EEEEEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHH
Q psy12791 305 GM-LSFYVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIAD 382 (393)
Q Consensus 305 ~~-~~~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~ 382 (393)
++ +|+.++........+.+.+. ..++.+..|..+.. ..++++|++++.. +++++.
T Consensus 325 ~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---------------------~~~~~iRi~~~~~--~e~i~~ 381 (392)
T 3b1d_A 325 TYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGS---------------------EGELHARLNIAAP--KSLVEE 381 (392)
Confidence 33 46777321123455666663 45666665544310 1257899998863 444554
Q ss_pred HHHHHHH
Q psy12791 383 LDQALRK 389 (393)
Q Consensus 383 l~~al~~ 389 (393)
..+.|++
T Consensus 382 ~l~~l~~ 388 (392)
T 3b1d_A 382 ICKRIVC 388 (392)
Confidence 4444443
No 118
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.96 E-value=2.7e-27 Score=226.58 Aligned_cols=295 Identities=15% Similarity=0.124 Sum_probs=190.0
Q ss_pred CchHHHHHHHHHHHh------CCC-cEEEeccHHHH-H-HHHHHhcCCCC-----eEEEc-CCCccchHHHHHH--hccc
Q psy12791 58 NPTRRNLERCIASLE------EAK-HGLCYSSGLGA-V-TAVTHLLSAGD-----HIISG-DDVYGGTYRYFAQ--VAPK 120 (393)
Q Consensus 58 ~~~~~~lr~~la~~~------~~~-~~i~~~~G~~a-l-~~~~~~~~~gd-----~vl~~-~~~y~~~~~~~~~--~~~~ 120 (393)
..+..+||+++|+++ +.+ +.|++|+|+++ + .++..++++|| +|+++ .|+|++....... ....
T Consensus 74 ~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~ 153 (417)
T 3g7q_A 74 PQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVS 153 (417)
T ss_dssp TTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEE
T ss_pred CCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhcc
Confidence 456889999999987 343 67777777665 7 67777888987 89997 9999852211100 1223
Q ss_pred CCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCccccc--
Q psy12791 121 IGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQ-- 189 (393)
Q Consensus 121 ~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~-- 189 (393)
.+..+..++.+ |+++++ +.+++++|++++||||||.++| +++|.++|+++ |+++|+||+|+.+...
T Consensus 154 ~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~-~~~li~De~~~~~~~~~~ 230 (417)
T 3g7q_A 154 ARPNIELLPEGQFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQH-NIPLVIDNAYGVPFPGII 230 (417)
T ss_dssp CCCEEEEEGGGEEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHT-TCCEEEECTTCTTTTCCB
T ss_pred ccCcccccCCcccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHc-CCEEEEeCCCcccccccc
Confidence 45566666543 677776 6678999999999999999999 88899999999 9999999999863321
Q ss_pred ----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccC--CHHH-----H
Q psy12791 190 ----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLK--TLPC-----R 258 (393)
Q Consensus 190 ----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~ 258 (393)
.+...+.++++.|+|| + +.+|+|+||++++ +++.+.+......+....++..+..+...++ .+.. .
T Consensus 231 ~~~~~~~~~~~~i~~~s~sK-~-~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 307 (417)
T 3g7q_A 231 FSEARPLWNPNIILCMSLSK-L-GLPGSRCGIIIAN-DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVI 307 (417)
T ss_dssp CSCCCCCCCTTEEEEEESGG-G-TCTTSCCEEEECC-HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTH
T ss_pred ccccccCCCCCEEEEEechh-c-cCCCcceEEEEeC-HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHH
Confidence 1112467899999999 5 5899999999997 8999988877666555555555444433332 2221 2
Q ss_pred HHHHHHHHHHHHHHHhh-CCCc-ceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCC
Q psy12791 259 LKEHERGSIEVAKFLES-HPCV-KGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGG 336 (393)
Q Consensus 259 ~~~~~~~~~~l~~~l~~-~~~~-~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 336 (393)
.+.+.++.+.+.+.|++ ++.+ ..+..|. .+.++++.++......+.+.+.+...++.+..|.
T Consensus 308 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~ 371 (417)
T 3g7q_A 308 KPFYYQRVQQTIAIIRRYLSEERCLIHKPE----------------GAIFLWLWFKDLPITTELLYQRLKARGVLMVPGH 371 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTTCEEECCC----------------BSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGG
T ss_pred HHHHHHHHHHHHHHHHHhcccCCceeeCCC----------------cceEEEEEcCCCCCCHHHHHHHHHHCCEEEECch
Confidence 33445666677777765 4432 1222232 2467888885311233445555555567777665
Q ss_pred ccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 337 IESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 337 ~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.|+...... . +..++++|||++. ++++++.+.+.|.++
T Consensus 372 ~f~~~~~~~------~--------~~~~~~iRis~~~--~~~~i~~~~~~l~~~ 409 (417)
T 3g7q_A 372 YFFPGLDKP------W--------PHTHQCMRMNYVP--EPDKIEAGVKILAEE 409 (417)
T ss_dssp GGCTTBSSC------C--------GGGGGEEEEESCS--CHHHHHHHHHHHHHH
T ss_pred hhCCCCccc------c--------ccCCCeEEEEecC--CHHHHHHHHHHHHHH
Confidence 543211000 0 0014799999996 555555555555443
No 119
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.96 E-value=1.2e-27 Score=227.76 Aligned_cols=333 Identities=17% Similarity=0.144 Sum_probs=219.1
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCe
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDH 99 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~ 99 (393)
+++| +++.+++. +.+.+++.+.+.. ..|. +.+...++|+++|++++.++.+++++|++++ .++..+ +++||+
T Consensus 31 ~~id~~~~~~~~~--~~v~~a~~~~~~~-~~y~--~~~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~~~gd~ 105 (399)
T 2oga_A 31 PFLDLKAAYEELR--AETDAAIARVLDS-GRYL--LGPELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDE 105 (399)
T ss_dssp CSCCHHHHHHHTH--HHHHHHHHHHHHH-TCCS--SSHHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTCCTTCE
T ss_pred cccccCcCCCCCC--HHHHHHHHHHHhc-CCCC--CchhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCCCCcCE
Confidence 5667 66666653 3444443322111 1222 3477899999999999998899999998888 777777 889999
Q ss_pred EEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCC
Q psy12791 100 IISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHP 173 (393)
Q Consensus 100 vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~ 173 (393)
|+++.|+|++ +...++..|++++.++.+ |++++++.+++++++|+ |+||||.+.|+++|.++|+++
T Consensus 106 vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l~~~~- 177 (399)
T 2oga_A 106 VIVPSHTYIA----SWLAVSATGATPVPVEPHEDHPTLDPLLVEKAITPRTRALL---PVHLYGHPADMDALRELADRH- 177 (399)
T ss_dssp EEEESSSCTH----HHHHHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHH-
T ss_pred EEECCCccHH----HHHHHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccCHHHHHHHHHHc-
Confidence 9999999986 445567789999998763 78999999988888887 678999999999999999999
Q ss_pred CcEEEEeCccCcccccCCCCCc--CcEEEEcc--cccccCCCCceEEEEEecChHHHHHHHHHHHhc----------C--
Q psy12791 174 DILLVLDNTFLTAYYQKSLPWG--VDIVLYSL--TKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM----------G-- 237 (393)
Q Consensus 174 ~~~livDea~~~~~~~~~~~~~--~di~~~S~--sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~----------~-- 237 (393)
|+++|+|++|+.+........+ .|+++.|+ +|++ |++| |+||++++++++.+.++...... +
T Consensus 178 ~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK~~-~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~ 255 (399)
T 2oga_A 178 GLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGKNL-GCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTN 255 (399)
T ss_dssp TCEECEECTTCTTCEETTEETTCTTCEEEEECCTTSSS-CCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCB
T ss_pred CCEEEEECcccccCccCCeecccccCEEEEeCCCCccC-CcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccC
Confidence 9999999999876422111122 58999999 6999 6888 99999987688888876654321 1
Q ss_pred CCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc-CCHH
Q psy12791 238 VVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN-GGAE 316 (393)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 316 (393)
...++..++++...++.+....++..++.+.+.+.|++++++.....|. .+.+.++.+.+. .+.+
T Consensus 256 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~--------------~~~~~~~~~~~~~~~~~ 321 (399)
T 2oga_A 256 SRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAP--------------DTDPVWHLFTVRTERRD 321 (399)
T ss_dssp CCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCT--------------TEECCCSSEEEECSSHH
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCC--------------CCcceeEEEEEECCCHH
Confidence 2346677666666666666666666667777777777665543111111 001112224442 2333
Q ss_pred HHHHHHHhcCccccccccCCccccccCcccccC----CCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 317 ETRIFLESLLIFRCAESLGGIESLADLPAEMTH----KSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~----~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+.+.|...++.+..+........+..... ...+.... ...++|||+++..+++++++.+.++|+++.
T Consensus 322 ---~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~lRi~~~~~~t~edi~~~~~~l~~~~ 393 (399)
T 2oga_A 322 ---ELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAES----FARQVLSLPIGPHLERPQALRVIDAVREWA 393 (399)
T ss_dssp ---HHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHH----HHHHEEEECCSTTCCHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHH----HHhCEEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 344444333554443221100000000000 00000000 013689999999999999999999998764
No 120
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.96 E-value=2.3e-28 Score=233.42 Aligned_cols=317 Identities=10% Similarity=0.091 Sum_probs=211.4
Q ss_pred CCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-c-EEEec-cHHHHH-HHHHHhcCCCCeEEEc
Q psy12791 28 CVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-H-GLCYS-SGLGAV-TAVTHLLSAGDHIISG 103 (393)
Q Consensus 28 ~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~-~i~~~-~G~~al-~~~~~~~~~gd~vl~~ 103 (393)
.+..|..+++.+.+++.+... ..+.........++++.++++++.+ + .++++ +|++++ .++..++++||+|+++
T Consensus 17 ~~pgp~~~~~~v~~a~~~~~~--~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~ 94 (411)
T 3nnk_A 17 MGPGPINADPRVLRAMSSQLI--GQYDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVP 94 (411)
T ss_dssp ESSSCCCCCHHHHHHHTSCCC--CTTCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ecCCCCCCCHHHHHHhhcccc--ccccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEe
Confidence 356677777777766655421 1111101244688999999999987 3 35555 557778 7777889999999999
Q ss_pred CCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEE
Q psy12791 104 DDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILL 177 (393)
Q Consensus 104 ~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~l 177 (393)
+|+|++.. +...++..|++++.++.+ |++++++.+++ ++++|++++|+||||.+.|+++|.++|+++ |+++
T Consensus 95 ~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~l 171 (411)
T 3nnk_A 95 VFGRFGHL--LCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRY-DALF 171 (411)
T ss_dssp ECSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHH-TCEE
T ss_pred cCCchHHH--HHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHc-CCEE
Confidence 99997532 566678889999999876 89999999976 899999999999999999999999999999 9999
Q ss_pred EEeCccCcccccCCC-CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH-----------------------
Q psy12791 178 VLDNTFLTAYYQKSL-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ----------------------- 233 (393)
Q Consensus 178 ivDea~~~~~~~~~~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~----------------------- 233 (393)
|+|++++.+...... ..++|+++.|+||++.|++| +|+++++ +++.+.++...
T Consensus 172 i~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~ 248 (411)
T 3nnk_A 172 YTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSG--TSPITLS-ARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNY 248 (411)
T ss_dssp EEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSS--EEEEEEC-HHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCST
T ss_pred EEECCcccCCcccchhccCCcEEEecCccccCCCCc--eEEEEEC-HHHHHHHhhcccccccccccccccccCCCCcccc
Confidence 999998865432222 24789999999998657776 8999997 78887775432
Q ss_pred -------------HhcCCCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHH
Q psy12791 234 -------------NSMGVVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHEL 295 (393)
Q Consensus 234 -------------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~ 295 (393)
.......+......+...++ .+....++..++.+.+.+.|++. ++. +..+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~--------- 317 (411)
T 3nnk_A 249 FDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM-GLE-TFGDL--------- 317 (411)
T ss_dssp TCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BCSCG---------
T ss_pred cchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCE-eCCCc---------
Confidence 00111223333222222222 14455666677778888888764 322 11111
Q ss_pred HhhhcCCCcceEEEEEcCCHHHHHHHHHhcCc-cccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEe-cC
Q psy12791 296 AKSQWSGTSGMLSFYVNGGAEETRIFLESLLI-FRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSV-GV 373 (393)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~-~~ 373 (393)
....+.++++.++. ......+.+.+.. .++.+..|.. ...++++|+++ +.
T Consensus 318 ----~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~-----------------------~~~~~~iRi~~~~~ 369 (411)
T 3nnk_A 318 ----KHKMNNVLGVVIPQ-GINGDQARKLMLEDFGIEIGTSFG-----------------------PLHGKVWRIGTMGY 369 (411)
T ss_dssp ----GGBCSSEEEEECCT-TCCHHHHHHHHHHHHSEEEEECCG-----------------------GGTTTEEEEECCGG
T ss_pred ----ccccccEEEEECCC-CCCHHHHHHHHHHhcCeEEeCccC-----------------------CCCCCEEEEeCccC
Confidence 01135678888842 1122334443322 2444443310 01257999998 77
Q ss_pred CChHHHHHHHHHHHHHhh
Q psy12791 374 EGYTDLIADLDQALRKAC 391 (393)
Q Consensus 374 ~~~~~~i~~l~~al~~~~ 391 (393)
.+++++++.+.++|+++.
T Consensus 370 ~~~~~~i~~~~~~l~~~l 387 (411)
T 3nnk_A 370 NARKDCVMTTLSALEAVL 387 (411)
T ss_dssp GCSHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHH
Confidence 778888888888777653
No 121
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.96 E-value=1.9e-27 Score=224.76 Aligned_cols=300 Identities=16% Similarity=0.114 Sum_probs=198.6
Q ss_pred chHHHHHHHHHHHhCCC-cEEEeccHH-HHH-HHHHHhc----CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 59 PTRRNLERCIASLEEAK-HGLCYSSGL-GAV-TAVTHLL----SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~-~~i~~~~G~-~al-~~~~~~~----~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
+...++|+.+|+++|.+ +.+++++|+ +++ .++.++. ++||+|++++++|++...... .++..|++++.++.+
T Consensus 43 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~ 121 (382)
T 4eb5_A 43 EAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFEVEYIPVG 121 (382)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHTTTTCEEEEECBC
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHH-HHHhCCcEEEEeccC
Confidence 46788999999999986 566666654 557 6666666 899999999999986543332 345579999999874
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCC---CcCcEEEEcc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLP---WGVDIVLYSL 203 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~---~~~di~~~S~ 203 (393)
|++++++.+++++++|++++|+||||.++|+++|.++|+++ |++ |+|++|+.+.. +.. .+.|+++.|+
T Consensus 122 ~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~-i~D~a~~~g~~--~~~~~~~~~di~~~s~ 197 (382)
T 4eb5_A 122 KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGK-AAL-HIDATASVGQI--EVDVEKIGADMLTISS 197 (382)
T ss_dssp TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTS-SEE-EEECTTTBTTB--CCCHHHHTCSEEEEET
T ss_pred CCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHHHHHHHHC-CCE-EEEcchhcCCc--ccCccccCCCEEEeeh
Confidence 79999999988899999999999999999999999999999 999 99999985432 222 3679999999
Q ss_pred cccccCCCCceEEEEEecChH-HHHHHHH---HHHhcCCCCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHHhh
Q psy12791 204 TKYMNGHSDVVMGATVTNDDS-LQARLKF---LQNSMGVVPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 204 sK~~~G~~G~r~G~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~ 275 (393)
||++ |++| +||++++++. +...+.. .........+......+...++ .+...+++..++++.+.+.|++
T Consensus 198 sK~~-g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 274 (382)
T 4eb5_A 198 NDIY-GPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK 274 (382)
T ss_dssp GGGT-CCSS--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhc-CCCc--eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhh
Confidence 9997 7888 7999887432 1111000 0011122333333222222222 2344556667777888888887
Q ss_pred CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChh
Q psy12791 276 HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKE 355 (393)
Q Consensus 276 ~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~ 355 (393)
++++. +..+. . ...+++++|.+++ ...+.+.+.+...++.+..|..++..... +..
T Consensus 275 ~~~~~-~~~~~--~-----------~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~~~~~--------~~~ 330 (382)
T 4eb5_A 275 IEESY-LNGHP--E-----------KRLPNNVNVRFSY--IEGESIVLSLDMAGIQASTGSACSSKTLQ--------PSH 330 (382)
T ss_dssp STTEE-ECSCS--S-----------SBCTTEEEEEETT--SCHHHHHHHHHHHTCBCBCCCGGGTSSCC--------CCH
T ss_pred CCCeE-EeCCc--c-----------cCCCCEEEEEeCC--cCHHHHHHHHHHCCEEEeccccccCCCCc--------ccH
Confidence 66643 22111 0 0124678888853 12334555554446666666544321100 111
Q ss_pred hHhhcCCC----CCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 356 TRDALGIT----DNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 356 ~~~~~g~~----~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.....|.+ ++++|++++..+++++++.+.++|+++
T Consensus 331 ~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 369 (382)
T 4eb5_A 331 VLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGV 369 (382)
T ss_dssp HHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHH
Confidence 11122332 589999999888888888887777654
No 122
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.96 E-value=2.5e-27 Score=223.11 Aligned_cols=303 Identities=18% Similarity=0.170 Sum_probs=214.4
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
+.+...++|+++|+++|.++.+++++|++++ .++..+ +++||+|+++.++|++ +...++..|++++.++.+
T Consensus 33 ~~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~----~~~~~~~~G~~~~~~~~~~~~ 108 (367)
T 3nyt_A 33 LGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVA----TAETVALLGAKPVYVDIDPRT 108 (367)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTH----HHHHHHHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHH----HHHHHHHcCCEEEEEecCCcc
Confidence 5688999999999999999999999999998 777777 8899999999999996 445567789999999875
Q ss_pred ---CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcC--cEEEEcc--c
Q psy12791 132 ---KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGV--DIVLYSL--T 204 (393)
Q Consensus 132 ---d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~--di~~~S~--s 204 (393)
|++++++++++++++|+ |+||||...++++|.++|+++ |+++|+|++|+.+........+. |+++.|| +
T Consensus 109 ~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~~~i~~la~~~-~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~ 184 (367)
T 3nyt_A 109 YNLDPQLLEAAITPRTKAII---PVSLYGQCADFDAINAIASKY-GIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPS 184 (367)
T ss_dssp CSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHT-TCCBEEECTTTTTCEETTEETTSSSSEEEEECCTT
T ss_pred CCcCHHHHHHhcCcCCcEEE---eeCCccChhhHHHHHHHHHHc-CCEEEEECccccCCeECCeeccCCCCEEEEECCCC
Confidence 78999999988888888 888999999999999999999 99999999998654322211222 9999997 8
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHHHHh------------cCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKFLQNS------------MGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKF 272 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (393)
|++ |.+|. +|+++++++++.++++..... .....++..+.++...++.+....++..++.+.+.+.
T Consensus 185 K~l-~~~g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~ 262 (367)
T 3nyt_A 185 APL-GCYGD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLS 262 (367)
T ss_dssp SSS-CCSSC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CcC-CCcCc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 56675 999999778888888765432 2344667777777777777777777777888888888
Q ss_pred HhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccc-cCCC
Q psy12791 273 LESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEM-THKS 351 (393)
Q Consensus 273 l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~-~~~~ 351 (393)
|++.+ +. .+...... .....++.+.++ +.+ .+.+.|...++.++.+....+...+... ....
T Consensus 263 L~~~~-~~---~~~~~~~~---------~~~~~~~~~~~~-~~~---~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~ 325 (367)
T 3nyt_A 263 LKQVG-IG---TPFIEVNN---------ISVYAQYTVRMD-NRE---SVQASLKAAGVPTAVHYPIPLNKQPAVADEKAK 325 (367)
T ss_dssp HHHTT-CC---CCCCCTTE---------ECCCSSEEEECS-SHH---HHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCC
T ss_pred hccCC-ee---ccCCCCCC---------ceeeEEEEEEeC-CHH---HHHHHHHHCCCceeccCCCccccChhhhccCCC
Confidence 88763 21 11111000 001123555552 333 4444444445544443321222112111 1112
Q ss_pred CChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 352 IPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 352 ~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
++..... ..+.|||+++...++++++.+.+++++.
T Consensus 326 ~~~~~~~----~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 326 LPVGDKA----ATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp CHHHHHH----HHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred ChHHHHH----HhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 2222221 2578999999999999999999998764
No 123
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.96 E-value=2.8e-27 Score=226.02 Aligned_cols=247 Identities=14% Similarity=0.121 Sum_probs=166.0
Q ss_pred CCCCC-CCCCC-CCccCCeeeeCCCCCC-CCCccccCCCCchHHHHHHHHHHHh-CCC------cEE---EeccHHHHH-
Q psy12791 22 DQWRS-QCVIP-PIILSTTFKQNTPGQP-PQGFEYSRSNNPTRRNLERCIASLE-EAK------HGL---CYSSGLGAV- 87 (393)
Q Consensus 22 ~~~~~-~~~~~-p~~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~lr~~la~~~-~~~------~~i---~~~~G~~al- 87 (393)
.+.++ +.+.+ .+..++.+.++..+.. ...+.|. +..+..+||+++|+++ +.. +.+ .+.+|+.++
T Consensus 41 ~~~i~l~~g~~~d~~~~~~v~~a~~~a~~~~~~~y~--~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~ 118 (409)
T 4eu1_A 41 KRKVNLSIGVYRDDADQPFVLECVKQATLGTNMDYA--PVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALR 118 (409)
T ss_dssp SSCEECCCSSCCCTTSCCCCCHHHHTCCCCSCCCCC--CTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHH
T ss_pred cCceeeeeeEEECCCCCEeecHHHHhcCccccccCC--CCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHH
Confidence 35566 55554 3333444444333321 1123333 3567789999999976 543 333 244444455
Q ss_pred HH---HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcC---CCCcEEEEecCCC
Q psy12791 88 TA---VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIK---PNTKMVWIENPTN 154 (393)
Q Consensus 88 ~~---~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~---~~~~~v~l~~p~n 154 (393)
.+ +..++++||+|++++|+|.+ +...++..|.+++.++.. |++++++.+. ++++++++++|||
T Consensus 119 ~~~~~~~~~~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~N 194 (409)
T 4eu1_A 119 IGGDLLNRFVANCNRIYGPDVGYPN----HESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHN 194 (409)
T ss_dssp HHHHHGGGTSSSCCEEEEESSCCTH----HHHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCT
T ss_pred HHHHHHHHhcCCCCEEEEeCCCcHh----HHHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 22 23456889999999999985 667778899999999872 7899998885 3466777799999
Q ss_pred CcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC------C-----CCCcCcEEEEcccccccCCCCceEEEE--
Q psy12791 155 PLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK------S-----LPWGVDIVLYSLTKYMNGHSDVVMGAT-- 218 (393)
Q Consensus 155 ptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~------~-----~~~~~di~~~S~sK~~~G~~G~r~G~~-- 218 (393)
|||.+++ +++|.++|+++ |+++|+||+|..+.+.. + ......++++|+||.+ |++|+|+||+
T Consensus 195 PtG~~~~~~~l~~i~~~~~~~-~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~riG~~~~ 272 (409)
T 4eu1_A 195 PTGVDPTHDDWRQVCDVIKRR-NHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNF-GLYGHRCGALHI 272 (409)
T ss_dssp TTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTS-SCGGGCCEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHhC-CcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccc-cCccCCceEEEE
Confidence 9999999 45589999999 99999999999765422 0 1124568999999999 6999999997
Q ss_pred EecChH----HHHHHHHHHHhcCCCCCHHHHHHHHhccCC----------HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 219 VTNDDS----LQARLKFLQNSMGVVPSPFDCWLVTRGLKT----------LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 219 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
+..+++ +.+.++..........+...+..+...++. +...++++.++++.+.+.|++.
T Consensus 273 v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (409)
T 4eu1_A 273 STASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKAC 344 (409)
T ss_dssp ECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 666577 656565544333334445555544444332 3344556667777788888764
No 124
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.96 E-value=3.3e-27 Score=224.84 Aligned_cols=277 Identities=13% Similarity=0.082 Sum_probs=183.0
Q ss_pred CchHHHHHHHHHHHhCC-------CcEEEe--ccHHHH-H-HHHHHh---cCCCCeEEEcCCCccchHHHHHHhcccCCc
Q psy12791 58 NPTRRNLERCIASLEEA-------KHGLCY--SSGLGA-V-TAVTHL---LSAGDHIISGDDVYGGTYRYFAQVAPKIGL 123 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~-------~~~i~~--~~G~~a-l-~~~~~~---~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~ 123 (393)
..+..++|+++|++++. ++.|++ |+|+++ + .++..+ +++||+|++++|+|.+ +...++..|.
T Consensus 70 ~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~----~~~~~~~~g~ 145 (401)
T 7aat_A 70 IAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGN----HTPIFRDAGL 145 (401)
T ss_dssp TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTT----HHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchh----HHHHHHHcCC
Confidence 35678999999998753 456654 777665 6 444433 4899999999999986 5666788899
Q ss_pred EEEeeCCC-------CHHHHHhhc---CCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC
Q psy12791 124 EVDFVDLR-------KIENLIKYI---KPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK 190 (393)
Q Consensus 124 ~v~~~~~~-------d~~~l~~~l---~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~ 190 (393)
+++.++.+ |++++++.+ .++++++++++||||||.+++ +++|.++|+++ |+++|+||+|..+.+..
T Consensus 146 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~Deay~~~~~~~ 224 (401)
T 7aat_A 146 QLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKR-NLLAYFDMAYQGFASGD 224 (401)
T ss_dssp EEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTTTTTSC
T ss_pred eeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC-CcEEEEccccccccCCC
Confidence 99998863 566555544 357899999999999999998 77888899999 99999999999765432
Q ss_pred C-----------CCCcCcEEEEcccccccCCCCceEEEEEe--cChH----HHHHHHHHHHhcCCCCCHHHHHHHHhcc-
Q psy12791 191 S-----------LPWGVDIVLYSLTKYMNGHSDVVMGATVT--NDDS----LQARLKFLQNSMGVVPSPFDCWLVTRGL- 252 (393)
Q Consensus 191 ~-----------~~~~~di~~~S~sK~~~G~~G~r~G~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 252 (393)
. ......++++|+||.+ |++|+|+||+++ .+++ +.+.++..........+...+..+...+
T Consensus 225 ~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 303 (401)
T 7aat_A 225 INRDAWALRHFIEQGIDVVLSQSYAKNM-GLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILN 303 (401)
T ss_dssp HHHHTHHHHHHHHTTCCCEEEEECTTTS-CCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHhcCCcEEEEecCCccc-ccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhC
Confidence 1 1124679999999999 799999999987 3355 4444444433333344444444333222
Q ss_pred ---------CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHH
Q psy12791 253 ---------KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLE 323 (393)
Q Consensus 253 ---------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
+.+...++++.++++.+.+.|+++..- +++ ... . ...+.++++.+ +.+....+++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-----~~~------~~~-~--~~~~~~~~~~~--~~~~~~~ll~ 367 (401)
T 7aat_A 304 TPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSS-----HNW------QHI-T--DQIGMFCFTGL--KPEQVERLTK 367 (401)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-----SCC------HHH-H--HCCSSEEECCC--CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----CCC------cee-c--CCcceEEecCC--CHHHHHHHHH
Confidence 123334556667777788888764200 000 000 0 11133455555 3455555544
Q ss_pred hcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 324 SLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 324 ~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
...+ .+ ...+|+|++..++++ ++.+.++|+++.
T Consensus 368 ~~gi---~v-------------------------------~~~~Ris~~~~~~~~-i~~~~~~l~~~~ 400 (401)
T 7aat_A 368 EFSI---YM-------------------------------TKDGRISVAGVASSN-VGYLAHAIHQVT 400 (401)
T ss_dssp HHCE---EC-------------------------------CTTCEEEGGGCCTTT-HHHHHHHHHHHH
T ss_pred hCCE---ec-------------------------------cCCCeEEeccCChhh-HHHHHHHHHHHh
Confidence 3332 22 123699999877777 888888888764
No 125
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.96 E-value=2.1e-28 Score=232.38 Aligned_cols=316 Identities=15% Similarity=0.102 Sum_probs=209.8
Q ss_pred CCCCC-CCCCCCCc---cCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcC
Q psy12791 22 DQWRS-QCVIPPII---LSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLS 95 (393)
Q Consensus 22 ~~~~~-~~~~~p~~---~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~ 95 (393)
..++| +++.+|.. .++.+.+++.+.+.. .+.+..++++...++++.+++++|.++.+++++|++++ .++..+..
T Consensus 36 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al~~~~~ 115 (392)
T 3ruy_A 36 NRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTARR 115 (392)
T ss_dssp CEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHH
Confidence 45667 66554433 344455443332211 12223356788999999999999966777777788887 55554443
Q ss_pred C----------CCeEEEcCCCccchHHHHHHhcccC---------CcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCc
Q psy12791 96 A----------GDHIISGDDVYGGTYRYFAQVAPKI---------GLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPL 156 (393)
Q Consensus 96 ~----------gd~vl~~~~~y~~~~~~~~~~~~~~---------g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt 156 (393)
+ +|+|++..++|++............ ...+..++.+|++++++++++++++|++++|+|||
T Consensus 116 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~npt 195 (392)
T 3ruy_A 116 WAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAITPNTAAFILEPIQGEA 195 (392)
T ss_dssp HHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTTCHHHHHHHCCTTEEEEEECSSBSTT
T ss_pred hhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcccHHHHHHHhccCeEEEEEeCccCCC
Confidence 2 6799999999976433222221110 12366777779999999999889999999999999
Q ss_pred ccccC----HHHHHHHHHhCCCcEEEEeCccCccccc-CCC-----CCcCcEEEEcccccccCCCC-ceEEEEEecChHH
Q psy12791 157 MTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQ-KSL-----PWGVDIVLYSLTKYMNGHSD-VVMGATVTNDDSL 225 (393)
Q Consensus 157 G~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~-~~~-----~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~ 225 (393)
|.++| +++|.++|+++ |+++|+||+|+.+... .+. ....|++ |+||.++| | +|+||++++ +++
T Consensus 196 G~~~~~~~~l~~i~~l~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--~~SK~l~g--G~~~~G~~~~~-~~~ 269 (392)
T 3ruy_A 196 GINIPPAGFLKEALEVCKKE-NVLFVADEIQTGLGRTGKVFACDWDNVTPDMY--ILGKALGG--GVFPISCAAAN-RDI 269 (392)
T ss_dssp TSBCCCTTHHHHHHHHHHTT-TCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT--TTSCCEEEEEC-HHH
T ss_pred CCccCCHHHHHHHHHHHHHc-CCEEEEeechhCCCccccchhhhccCCCCCEE--EEchhhhC--ChhhhEEEEEC-HHH
Confidence 99998 99999999999 9999999999753221 111 1234665 67799843 6 899999997 777
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHhccCCH--HHHHHHHHHHHHHHHHHHhhCC--CcceEeCCCCCCCcchHHHhhhcC
Q psy12791 226 QARLKFLQNSMGVVPSPFDCWLVTRGLKTL--PCRLKEHERGSIEVAKFLESHP--CVKGVLHPGLPSHPNHELAKSQWS 301 (393)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~--~~~~v~~~~l~~~~~~~~~~~~~~ 301 (393)
.+.+...........++..+..+...++.+ ....++..++.+.+.+.|+++. .+..+ .
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~------------------~ 331 (392)
T 3ruy_A 270 LGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPMITEV------------------R 331 (392)
T ss_dssp HTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCCTTEEEE------------------E
T ss_pred HhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcCCCceEE------------------E
Confidence 776654333333455666666555554433 2345556667777777777542 11111 1
Q ss_pred CCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHH
Q psy12791 302 GTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIA 381 (393)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~ 381 (393)
+.+.++.+.+++ ....+.+.+...++.+..|+ ++++|++++...++++++
T Consensus 332 ~~g~~~~~~~~~---~~~~l~~~l~~~gi~v~~~~---------------------------~~~iRi~~~~~~~~~~i~ 381 (392)
T 3ruy_A 332 GKGLFIGIELNE---PARPYCEQLKAAGLLCKETH---------------------------ENVIRIAPPLVISEEDLE 381 (392)
T ss_dssp EETTEEEEEESS---CSHHHHHHHHTTTEECCCBT---------------------------TTEEEECCCTTCCHHHHH
T ss_pred eeeeEEEEEEcc---hHHHHHHHHHHCCcEEecCC---------------------------CCEEEEECCCCCCHHHHH
Confidence 225788888853 33445555544455544321 579999999999999999
Q ss_pred HHHHHHHHhh
Q psy12791 382 DLDQALRKAC 391 (393)
Q Consensus 382 ~l~~al~~~~ 391 (393)
.+.++|+++.
T Consensus 382 ~~~~~l~~~l 391 (392)
T 3ruy_A 382 WAFQKIKAVL 391 (392)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988754
No 126
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.95 E-value=7.1e-28 Score=228.45 Aligned_cols=317 Identities=16% Similarity=0.159 Sum_probs=211.1
Q ss_pred CCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC--cEEEe-ccHHHHH-HHHHHhcCCCCeEEEc
Q psy12791 28 CVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK--HGLCY-SSGLGAV-TAVTHLLSAGDHIISG 103 (393)
Q Consensus 28 ~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~--~~i~~-~~G~~al-~~~~~~~~~gd~vl~~ 103 (393)
.+.+|..+++.+.+++.+.... + +.....+...++++.++++++.+ +.+++ ++|++++ .++..++++||+|+++
T Consensus 27 ~~p~p~~~~~~v~~a~~~~~~~-~-~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~ 104 (393)
T 3kgw_A 27 LGPGPSNLAPRVLAAGSLRMIG-H-MQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTG 104 (393)
T ss_dssp CSSSCCCCCHHHHHHTTCCCCC-T-TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEE
T ss_pred ccCCCCCCCHHHHHHhcccccC-c-ccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEE
Confidence 4667777777787777654221 1 11111356678999999999976 34655 5556677 7777889999999999
Q ss_pred CCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEE
Q psy12791 104 DDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILL 177 (393)
Q Consensus 104 ~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~l 177 (393)
.++|.+. .+...++..|.+++.++.+ |++++++.+++ ++++|++++|+||||.++|+++|.++|+++ |+++
T Consensus 105 ~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~l 181 (393)
T 3kgw_A 105 TNGIWGM--RAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRY-QCLL 181 (393)
T ss_dssp ESSHHHH--HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHT-TCEE
T ss_pred eCCchhH--HHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHc-CCEE
Confidence 8887532 2456677889999988864 78999999987 899999999999999999999999999999 9999
Q ss_pred EEeCccCcccccCC-CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH--------------hc------
Q psy12791 178 VLDNTFLTAYYQKS-LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN--------------SM------ 236 (393)
Q Consensus 178 ivDea~~~~~~~~~-~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--------------~~------ 236 (393)
|+||+|+.+..... ...+.|+++.|+||+++|++| +|+++++ +++++.+..... .+
T Consensus 182 i~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (393)
T 3kgw_A 182 LVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPG--ISLISFN-DKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGET 258 (393)
T ss_dssp EEECTTTTTTSCCCTTTTTCCEEEEESSSTTCCCSS--CEEEEEC-HHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSC
T ss_pred EEECCccccCcccchhhcCCCEEEecCcccccCCCc--eeEEEEC-HHHHHHHhccCCCCCceeecHHHHHHhhhhcccc
Confidence 99999985433222 234689999999998867777 8999997 788777653211 11
Q ss_pred ---CCCCCHHHHHHHHhccC-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEE
Q psy12791 237 ---GVVPSPFDCWLVTRGLK-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLS 308 (393)
Q Consensus 237 ---~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 308 (393)
....+......+...++ .+....++..++.+.+.+.|+++ ++. +..+. . ....+.+++
T Consensus 259 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~----~--------~~~~~~~~~ 324 (393)
T 3kgw_A 259 RVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLK-FFVKD----P--------EIRLPTITT 324 (393)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSSS----G--------GGBCSSEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCe-eccCC----h--------hhcCCeEEE
Confidence 12233333332222222 24556677778888888888876 332 11111 0 011235667
Q ss_pred EEEcCCHHHHHHHHHhcCcc-ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEe-cCCChHHHHHHHHHH
Q psy12791 309 FYVNGGAEETRIFLESLLIF-RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSV-GVEGYTDLIADLDQA 386 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~l~~~-~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~-~~~~~~~~i~~l~~a 386 (393)
+.++. ......+.+.+... ++.+..|..+ ..++++|+++ +...++++++.+.++
T Consensus 325 ~~~~~-~~~~~~~~~~l~~~~gi~v~~g~~~-----------------------~~~~~iRi~~~~~~~~~~~i~~~~~~ 380 (393)
T 3kgw_A 325 VTVPA-GYNWRDIVSYVLDHFSIEISGGLGP-----------------------TEERVLRIGLLGYNATTENVDRVAEA 380 (393)
T ss_dssp EECCT-TBCHHHHHHHHHHHHCEECBCCCGG-----------------------GTTTEEEEECCGGGCCHHHHHHHHHH
T ss_pred EeCCC-CCCHHHHHHHHHHhCCEEEeCCccc-----------------------CCCCEEEEEecccCCCHHHHHHHHHH
Confidence 87742 12233444444332 5555544310 1257999998 665566666666666
Q ss_pred HHHh
Q psy12791 387 LRKA 390 (393)
Q Consensus 387 l~~~ 390 (393)
|+++
T Consensus 381 l~~~ 384 (393)
T 3kgw_A 381 LREA 384 (393)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 127
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.95 E-value=1.8e-27 Score=225.03 Aligned_cols=303 Identities=16% Similarity=0.133 Sum_probs=198.1
Q ss_pred CchHHHHHHHHHHHhCCC-cEEEeccHH-HHH-HHHHHhc----CCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC
Q psy12791 58 NPTRRNLERCIASLEEAK-HGLCYSSGL-GAV-TAVTHLL----SAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL 130 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~-~~i~~~~G~-~al-~~~~~~~----~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~ 130 (393)
.....++++++|+++|.+ +.+++++|+ +++ .++..+. ++||+|++++|+|++..... ..++..|++++.++.
T Consensus 43 ~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~ 121 (384)
T 1eg5_A 43 NLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETM-KYLSMKGFKVKYVPV 121 (384)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHH-HHHHHTTCEEEECCB
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHH-HHHHhcCCEEEEEcc
Confidence 355689999999999986 566666655 457 6666665 79999999999998643322 234667999999987
Q ss_pred C-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCC--cEEEEeCccCcccccCCC-CCcCcEEEEc
Q psy12791 131 R-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPD--ILLVLDNTFLTAYYQKSL-PWGVDIVLYS 202 (393)
Q Consensus 131 ~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~--~~livDea~~~~~~~~~~-~~~~di~~~S 202 (393)
+ |++++++.+.+++++|++++|+||||.++|+++|.++|+++ | +++|+||+|+.+.....+ ..++|+++.|
T Consensus 122 ~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~-~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s 200 (384)
T 1eg5_A 122 DSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKK-NKETLVHVDAVQTIGKIPFSLEKLEVDYASFS 200 (384)
T ss_dssp CTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHH-CTTCEEEEECTTTTTTSCCCCTTTCCSEEEEE
T ss_pred CCCCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHHHHHHHhc-CCceEEEEEhhhhcCCcccCchhcCCCEEEec
Confidence 4 78999999988899999999999999999999999999999 8 999999999843221122 2368999999
Q ss_pred ccccccCCCCceEEEEEecChHH--HHHHHHH---HHhcCCCCCHHHHHHHHhccC----CHHHHHHHHHHHHHHHHHHH
Q psy12791 203 LTKYMNGHSDVVMGATVTNDDSL--QARLKFL---QNSMGVVPSPFDCWLVTRGLK----TLPCRLKEHERGSIEVAKFL 273 (393)
Q Consensus 203 ~sK~~~G~~G~r~G~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l 273 (393)
+||++ |++| +||++++ +++ ...+... ........+...+..+...++ .+...+++..++++.+.+.|
T Consensus 201 ~sK~~-g~~G--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 276 (384)
T 1eg5_A 201 AHKFH-GPKG--VGITYIR-KGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGL 276 (384)
T ss_dssp GGGGT-SCTT--CEEEEEC-TTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhc-CCCc--eEEEEEc-CCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 99998 7888 7999998 443 2211110 001122344444433333332 34456666777788888888
Q ss_pred hhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCC
Q psy12791 274 ESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIP 353 (393)
Q Consensus 274 ~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~ 353 (393)
++ +++. +..+. ....+.+++|.+++. ....+.+.|...++.+..|..++..... +
T Consensus 277 ~~-~g~~-~~~~~-------------~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~~~~~~--------~ 331 (384)
T 1eg5_A 277 MN-LGAH-IITPL-------------EISLPNTLSVSFPNI--RGSTLQNLLSGYGIYVSTSSACTSKDER--------L 331 (384)
T ss_dssp HT-TTCE-ECSCT-------------TSBCTTEEEEECTTC--CHHHHHHHHHHTTEECBC-------------------
T ss_pred CC-CCeE-EeCCc-------------ccCCCCEEEEEeCCC--CHHHHHHHHhhCCeEEeccccccCCCCc--------c
Confidence 76 4442 22111 011346778877431 2334555555556666665543211000 0
Q ss_pred hhhHhhcCCC----CCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 354 KETRDALGIT----DNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 354 ~~~~~~~g~~----~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.......|.+ ++++||+++...++++++.+.++|+++.
T Consensus 332 ~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~ 373 (384)
T 1eg5_A 332 RHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEIL 373 (384)
T ss_dssp -CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 0111122322 4799999998888888888888877653
No 128
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.95 E-value=3.6e-28 Score=233.16 Aligned_cols=323 Identities=14% Similarity=0.097 Sum_probs=203.2
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCC--CCCccccCCCCc--h---HHHHHHHHHHHhC------C-CcEEEeccHHHH-
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQP--PQGFEYSRSNNP--T---RRNLERCIASLEE------A-KHGLCYSSGLGA- 86 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~--~~~~~y~~~~~~--~---~~~lr~~la~~~~------~-~~~i~~~~G~~a- 86 (393)
..++ +.+.+++.+++.+.+.+.+.+ ..... ..|+++ + ..+||+++|++++ . +++|++|+|+++
T Consensus 57 ~~i~l~~g~~~~~~~~~v~~a~~~~l~~~~~~~-~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~a 135 (427)
T 2hox_A 57 CSADVASGDGLFLEEYWKQHKEASAVLVSPWHR-MSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQL 135 (427)
T ss_dssp CCEECCSCCCGGGHHHHTTSHHHHCEEECTTTT-CSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHH
T ss_pred ceEEecCcCCCCCCCHHHHHhHHhhhhcCCccc-ccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHH
Confidence 4556 666777665554443332221 11111 113333 4 7899999999985 3 368999998876
Q ss_pred H-HHHHHh--------cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcc
Q psy12791 87 V-TAVTHL--------LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLM 157 (393)
Q Consensus 87 l-~~~~~~--------~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG 157 (393)
+ .++.++ +++||+|+++.|+|.. +...++..|++++.+.. |++++++.+.+++++|++++||||||
T Consensus 136 l~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~----~~~~~~~~g~~~~~~~~-d~~~l~~~~~~~~k~v~l~~p~NPtG 210 (427)
T 2hox_A 136 IHGLVISLSPNMTATPDAPESKVVAHAPFYPV----FREQTKYFDKKGYVWAG-NAANYVNVSNPEQYIEMVTSPNNPEG 210 (427)
T ss_dssp HHHHHHHHSCCTTTCTTSCCEEEEECSSCCHH----HHHHHHHSCBTTEEEEE-EGGGGTTCSCGGGEEEEEESSCTTTC
T ss_pred HHHHHHHHhhccccccCCCCCEEEEeCCCccc----HHHHHHHcCCeeeeecC-CHHHHHHhhcCCceEEEEcCCCCCcc
Confidence 7 667778 8999999999999984 66677778887766543 67888888877899999999999999
Q ss_pred cccCHHHHHHHHHhCCCcEEEEeCccCcccc-cCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc
Q psy12791 158 TVFDVKAISAVVKQHPDILLVLDNTFLTAYY-QKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM 236 (393)
Q Consensus 158 ~~~~~~~l~~l~~~~~~~~livDea~~~~~~-~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~ 236 (393)
.+++ + +++ ++..++|+++..... ...+..+++++++||||.+ |++|+|+||++++++++++.++......
T Consensus 211 ~~~~-~----~l~---~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~-g~~G~RiG~~~~~~~~l~~~l~~~~~~~ 281 (427)
T 2hox_A 211 LLRH-A----VIK---GCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFT-GHSGSRFGWALIKDESVYNNLLNYMTKN 281 (427)
T ss_dssp CCCC-C----SST---TCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHT-SCGGGCCEEEEECCHHHHHHHHHHHHHH
T ss_pred cccH-H----HHc---CCCEEEeecccCCCCCccccCCCceEEEEeChhcC-CCCCceEEEEEECCHHHHHHHHHHHHhc
Confidence 9999 4 222 557889998764211 0112246889999999999 7999999999996589999988777655
Q ss_pred CCCCCHHHHHHHHhccC--------------C-HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcC
Q psy12791 237 GVVPSPFDCWLVTRGLK--------------T-LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWS 301 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~--------------~-~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~ 301 (393)
....+...+..+...++ . +...++.+.++.+.+.+.|++.+++. ...+........+.....
T Consensus 282 ~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~---~~~~~~~~~~~~~~~~~p 358 (427)
T 2hox_A 282 TEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFS---YQELPQSEYCNYFRRMRP 358 (427)
T ss_dssp TSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEE---CCCCCSCEEETTTTEEEC
T ss_pred CCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCcc---ccccccccccccccccCC
Confidence 55555555443333222 2 33345666777888888888765542 110000000000000001
Q ss_pred CCcceEEEEEcCC-HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHH
Q psy12791 302 GTSGMLSFYVNGG-AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLI 380 (393)
Q Consensus 302 ~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i 380 (393)
..+.++|+.++.+ .+..+.+++ ..++.+..|..+.. .++++|||++. +++.+
T Consensus 359 ~~g~f~~~~~~~~~~~~~~~ll~---~~gI~v~pg~~f~~----------------------~~~~~Ris~~~--~~e~l 411 (427)
T 2hox_A 359 PSPSYAWVKCEWEEDKDCYQTFQ---NGRINTQNGVGFEA----------------------SSRYVRLSLIK--TQDDF 411 (427)
T ss_dssp CCCSEEEEEECSGGGCSHHHHHH---HTTEECEEGGGGTS----------------------CTTEEEEECSS--CHHHH
T ss_pred CCceEEEEECCCcHHHHHHHHHH---HCCEEEcCCCccCC----------------------CCCEEEEEecC--CHHHH
Confidence 1246789999531 112223322 33555555544311 15899999985 44445
Q ss_pred HHHHHHHHHh
Q psy12791 381 ADLDQALRKA 390 (393)
Q Consensus 381 ~~l~~al~~~ 390 (393)
+...+.|.++
T Consensus 412 ~~~l~~l~~~ 421 (427)
T 2hox_A 412 DQLMYYLKDM 421 (427)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555443
No 129
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.95 E-value=3.6e-27 Score=224.17 Aligned_cols=213 Identities=14% Similarity=0.105 Sum_probs=155.4
Q ss_pred CchHHHHHHHHHHHhCC-------Cc--EEEeccHHHH-H-HH--HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE
Q psy12791 58 NPTRRNLERCIASLEEA-------KH--GLCYSSGLGA-V-TA--VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE 124 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~-------~~--~i~~~~G~~a-l-~~--~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~ 124 (393)
..+..++|+++|++++. ++ .+++++|+++ + .+ +.+++++||+|+++.|+|.+ +...++..|.+
T Consensus 69 ~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~----~~~~~~~~g~~ 144 (397)
T 3fsl_A 69 MEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWEN----HVAIFAGAGFE 144 (397)
T ss_dssp TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHH----HHHHHHHTTCC
T ss_pred CCchHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchh----HHHHHHHcCCc
Confidence 35678999999998743 35 7888888775 6 44 34567999999999999985 66677888999
Q ss_pred EEeeCC----C---CHHHHHhhcC---CCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC-
Q psy12791 125 VDFVDL----R---KIENLIKYIK---PNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK- 190 (393)
Q Consensus 125 v~~~~~----~---d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~- 190 (393)
++.++. + |++++++.+. ++++++++++||||||.+++ +++|.++|+++ |+++|+||+|..+.+..
T Consensus 145 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~~ 223 (397)
T 3fsl_A 145 VSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKAR-ELIPFLDIAYQGFGAGME 223 (397)
T ss_dssp EEEECCEETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTTSSSCTT
T ss_pred eEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhC-CEEEEEecCchhhccCcc
Confidence 999988 2 7999999987 56889999999999999988 55888999999 99999999999865431
Q ss_pred ----C-----CCCcCcEEEEcccccccCCCCceEEEEEe--cChHHHHHHHH-HH---HhcCCCCCHHHHHHHHhccCC-
Q psy12791 191 ----S-----LPWGVDIVLYSLTKYMNGHSDVVMGATVT--NDDSLQARLKF-LQ---NSMGVVPSPFDCWLVTRGLKT- 254 (393)
Q Consensus 191 ----~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~--~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~- 254 (393)
+ ...+.+++++|+||.+ |++|+|+||+++ .++++++.+.. .. .......+...+..+...+..
T Consensus 224 ~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 302 (397)
T 3fsl_A 224 EDAYAIRAIASAGLPALVSNSFSKIF-SLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDE 302 (397)
T ss_dssp GGGHHHHHHHHTTCCEEEEEECTTTT-TCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSH
T ss_pred cccHHHHHHHhcCCCEEEEecccccc-cCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCH
Confidence 1 1135679999999999 799999999975 34566654422 21 112223333333333332322
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 255 ---------LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 255 ---------~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
+...++++.++++.+.+.|+++
T Consensus 303 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 333 (397)
T 3fsl_A 303 ALKASWLKEVEEMRTRILAMRQELVKVLSTE 333 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3345556667777888888764
No 130
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.95 E-value=1.8e-27 Score=224.61 Aligned_cols=306 Identities=14% Similarity=0.106 Sum_probs=216.7
Q ss_pred CchHHHHHHHH-HHHhC-CCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--
Q psy12791 58 NPTRRNLERCI-ASLEE-AKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-- 131 (393)
Q Consensus 58 ~~~~~~lr~~l-a~~~~-~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-- 131 (393)
.|...+||+++ |+++| .++.++++||++++ .++.++ +++||+|+++.++|.+ +...++..|++++.++.+
T Consensus 35 ~~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~----~~~~~~~~G~~~~~v~~~~~ 110 (377)
T 3ju7_A 35 GPINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPA----TPLAAIWCGLEPYFIDISID 110 (377)
T ss_dssp CHHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTH----HHHHHHHTTCEEEEECBCTT
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHH----HHHHHHHcCCEEEEEecCCc
Confidence 47889999999 99999 67899999999998 777776 8999999999999996 445567789999999864
Q ss_pred ----CHHHHHhhc-CCC--CcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC--CC-CCcCcEEEE
Q psy12791 132 ----KIENLIKYI-KPN--TKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK--SL-PWGVDIVLY 201 (393)
Q Consensus 132 ----d~~~l~~~l-~~~--~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~--~~-~~~~di~~~ 201 (393)
|++++++++ +++ |++|+ |+||+|.+.|+++|.++|+ + |+++|+|++|+.+.... +. ....|+.+.
T Consensus 111 ~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~-~-~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~ 185 (377)
T 3ju7_A 111 DWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEK-K-GVPVVVDAAPGFGLMNGGMHYGQDFSGMIIY 185 (377)
T ss_dssp TCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHH-T-TCCBEEECTTCTTCEETTEETTTTCSSEEEE
T ss_pred cCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHh-c-CCEEEEECCCccCCeECCEeccCCCCcEEEE
Confidence 789999988 556 88887 7789999999999999999 9 99999999998754322 22 122577777
Q ss_pred cc--cccccCCCCceEEEEEecChHHHHHHHHHHHh------------cCCCCCHHHHHHHHhccCCHHHHHHHHHHHHH
Q psy12791 202 SL--TKYMNGHSDVVMGATVTNDDSLQARLKFLQNS------------MGVVPSPFDCWLVTRGLKTLPCRLKEHERGSI 267 (393)
Q Consensus 202 S~--sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (393)
|| +|+++ . | ++|+++++++++.++++..+.. +....+.+.+++....++.+..+.++..++++
T Consensus 186 S~~~~K~l~-~-g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~ 262 (377)
T 3ju7_A 186 SFHATKPFG-I-G-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISE 262 (377)
T ss_dssp ECBTTSSSC-C-B-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ECCCCCcCC-C-C-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 69994 4 4 5899999888998888766542 23446778888888888888888999999999
Q ss_pred HHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccc
Q psy12791 268 EVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEM 347 (393)
Q Consensus 268 ~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~ 347 (393)
.+.+.|+.++.+.....+.-.. ..+..++.+.++ +....+.+.+.|...++.++.+....+...+...
T Consensus 263 ~~~~~L~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~-~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~ 330 (377)
T 3ju7_A 263 WYKQLLQSNGLMKKGWQLQKTE-----------AVIQQFMPILCP-EEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFR 330 (377)
T ss_dssp HHHHHHHHTTTTTTTCBCCCCS-----------CBCCSSEEEECC-TTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGT
T ss_pred HHHHHhcCCCCccccccCCCCC-----------cceEEEEEEEeC-ChhhHHHHHHHHHHCCCceecccCCccccchhhh
Confidence 9999998876542111111000 001123455553 2122556666666556665554321111111111
Q ss_pred --cCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 348 --THKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 348 --~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
....++..+.. ..+.|||+++...++++++.+.++++++.
T Consensus 331 ~~~~~~~p~~~~~----~~~~l~lp~~~~~t~~di~~v~~~l~~~~ 372 (377)
T 3ju7_A 331 NYKSTDLTRTNKI----AKRIVSLPLWEGMTKEIVEQIVICLGQKV 372 (377)
T ss_dssp TSCBSCCHHHHHH----HHHEEEECCCTTCCHHHHHHHHHHHTC--
T ss_pred cCCCCCCHHHHHH----HhCEEECCCCCCCCHHHHHHHHHHHHHHH
Confidence 11122222222 25799999999999999999999987654
No 131
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.95 E-value=2.1e-27 Score=227.68 Aligned_cols=213 Identities=14% Similarity=0.065 Sum_probs=155.8
Q ss_pred CchHHHHHHHHHHHhCC-------Cc--EEEeccHHHH-H-HH--HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE
Q psy12791 58 NPTRRNLERCIASLEEA-------KH--GLCYSSGLGA-V-TA--VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE 124 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~-------~~--~i~~~~G~~a-l-~~--~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~ 124 (393)
..+..++|+++++++.. ++ ++++|+|+++ + .+ +.+++++||+|++++|+|.+ +...++..|.+
T Consensus 91 ~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~----~~~~~~~~g~~ 166 (420)
T 4f4e_A 91 IDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWEN----HRALFDMAGFE 166 (420)
T ss_dssp TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHH----HHHHHHHTTCC
T ss_pred CCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHh----HHHHHHHcCCe
Confidence 45778999999998743 34 7888888775 6 55 35668999999999999985 66777888999
Q ss_pred EEeeCC----C---CHHHHHhhcC---CCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC-
Q psy12791 125 VDFVDL----R---KIENLIKYIK---PNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK- 190 (393)
Q Consensus 125 v~~~~~----~---d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~- 190 (393)
++.++. + |++++++.+. ++++++++++||||||.+++ +++|.++|+++ |+++|+||+|..+.+..
T Consensus 167 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~-~~~li~De~y~~~~~~~~ 245 (420)
T 4f4e_A 167 VVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKAR-RLVPFLDIAYQGFGESIE 245 (420)
T ss_dssp EEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTSSSCTT
T ss_pred EEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CcEEEEccccccccCCcc
Confidence 999987 2 7899999887 56899999999999999998 56888889999 99999999998765431
Q ss_pred ----C-----CCCcCcEEEEcccccccCCCCceEEEEEe--cChHHHHHH----HHHHHhcCCCCCHHHHHHHHhccCC-
Q psy12791 191 ----S-----LPWGVDIVLYSLTKYMNGHSDVVMGATVT--NDDSLQARL----KFLQNSMGVVPSPFDCWLVTRGLKT- 254 (393)
Q Consensus 191 ----~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~- 254 (393)
+ ...+.+++++|+||.+ |++|+|+||+++ +++++++.+ +..........+...+..+...+..
T Consensus 246 ~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 324 (420)
T 4f4e_A 246 ADAAAVRLFAAANLNVFVSSSFSKSF-SLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASP 324 (420)
T ss_dssp GGGHHHHHHHHTTCCEEEEEECTTTT-TCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCH
T ss_pred hhhHHHHHHHhcCCCEEEEEeCCccC-cCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCH
Confidence 0 0135679999999999 699999999864 446655543 2222222223334443333322222
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 255 ---------LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 255 ---------~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
+...++++.++++.+.+.|+++
T Consensus 325 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 325 ELRASWVQELGEMRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3445566667777888888765
No 132
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.95 E-value=5.8e-27 Score=230.71 Aligned_cols=164 Identities=22% Similarity=0.306 Sum_probs=132.8
Q ss_pred CchHHHHHHHHHHHh----CC------CcEEEeccHHHH-H-HHHHH-----hcCCCCeEEEcCCCccchHHHHHHhccc
Q psy12791 58 NPTRRNLERCIASLE----EA------KHGLCYSSGLGA-V-TAVTH-----LLSAGDHIISGDDVYGGTYRYFAQVAPK 120 (393)
Q Consensus 58 ~~~~~~lr~~la~~~----~~------~~~i~~~~G~~a-l-~~~~~-----~~~~gd~vl~~~~~y~~~~~~~~~~~~~ 120 (393)
..+..++|+++|+++ +. ++.|++|+|+++ + .++.. ++++||+|++++|+|.+ +...++.
T Consensus 137 ~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~----~~~~~~~ 212 (533)
T 3f6t_A 137 DRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTP----YLRIPEL 212 (533)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHH----HHTSGGG
T ss_pred cccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHH----HHHHHHH
Confidence 456788999999986 32 258888888776 6 55555 68999999999999984 6777788
Q ss_pred CCcEEEeeCCC---------CHHHHHhhcCCCCcEEEEecCCCCcccccCHH---HHHHHHH-hCCCcEEEEeCccCccc
Q psy12791 121 IGLEVDFVDLR---------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVK---AISAVVK-QHPDILLVLDNTFLTAY 187 (393)
Q Consensus 121 ~g~~v~~~~~~---------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~---~l~~l~~-~~~~~~livDea~~~~~ 187 (393)
.|.+++.++.+ |++++++.+.+++++|++++|+||||.+++.+ +|.++|+ ++ ++++|+||+|..+.
T Consensus 213 ~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~-~~~li~De~y~~~~ 291 (533)
T 3f6t_A 213 KDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNP-KLMIISDEVYGAFV 291 (533)
T ss_dssp GGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCT-TCEEEEECTTGGGS
T ss_pred cCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCC-CCEEEEcCCccccc
Confidence 89998888763 78999999998999999999999999999966 7778888 68 99999999999765
Q ss_pred ccCC----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHH
Q psy12791 188 YQKS----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQA 227 (393)
Q Consensus 188 ~~~~----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~ 227 (393)
.... ...+++++++||||.+ |++|+|+||++++++++.+
T Consensus 292 ~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~l~~~~~~~~~ 334 (533)
T 3f6t_A 292 PNFKSIYSVVPYNTMLVYSYSKLF-GCTGWRLGVIALNEKNVFD 334 (533)
T ss_dssp TTCCCHHHHSGGGEEEEEESHHHH-TCGGGCEEEEEEESSCHHH
T ss_pred cCccCHhhcCCCCEEEEecCcccC-CCcccceEEEEECcHHHHH
Confidence 4211 1124679999999999 7999999999998553433
No 133
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.95 E-value=2.1e-27 Score=225.29 Aligned_cols=278 Identities=15% Similarity=0.064 Sum_probs=194.5
Q ss_pred chHHHHHHHHHHHhCCC-cEEEeccH-HHHH-HHHHHhcCC-------------CCeEEEcCCCccchHHHHHHhcccCC
Q psy12791 59 PTRRNLERCIASLEEAK-HGLCYSSG-LGAV-TAVTHLLSA-------------GDHIISGDDVYGGTYRYFAQVAPKIG 122 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~-~~i~~~~G-~~al-~~~~~~~~~-------------gd~vl~~~~~y~~~~~~~~~~~~~~g 122 (393)
....++++.+++++|.+ +.+++++| ++++ .++..+..+ ||+|+++.|+|++ +...++..|
T Consensus 69 ~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~----~~~~~~~~g 144 (397)
T 3f9t_A 69 LLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFS----FEKGREMMD 144 (397)
T ss_dssp HHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTH----HHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhH----HHHHHHHcC
Confidence 34567889999999987 45555555 5567 666666554 9999999999996 556667789
Q ss_pred cEEEeeCCC-----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-------
Q psy12791 123 LEVDFVDLR-----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ------- 189 (393)
Q Consensus 123 ~~v~~~~~~-----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~------- 189 (393)
++++.++.+ |++++++.+.+ ++++|++++|+||||.+.|+++|.++|+++ |+++|+||+|+.+...
T Consensus 145 ~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~li~Dea~~~~~~~~~~~~~~ 223 (397)
T 3f9t_A 145 LEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKEN-NIYIHVDAAFGGLVIPFLDDKYK 223 (397)
T ss_dssp CEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHH-TCEEEEECTTGGGTGGGCCGGGC
T ss_pred ceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHh-CCeEEEEccccchhhhhcccccc
Confidence 999999886 89999999988 899999999999999999999999999999 9999999999864321
Q ss_pred -----CCCCC--cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcC---------CCC--CHHHHHHHHhc
Q psy12791 190 -----KSLPW--GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMG---------VVP--SPFDCWLVTRG 251 (393)
Q Consensus 190 -----~~~~~--~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~---------~~~--~~~~~~~~~~~ 251 (393)
.+... +.|+++.|+||+++ +|.|+|+++++++.+.+.++.....+. ... +...++.+...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~s~~K~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 301 (397)
T 3f9t_A 224 KKGVNYKFDFSLGVDSITIDPHKMGH--CPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRY 301 (397)
T ss_dssp CTTCCCCCSGGGTCSEEECCTTTTTC--CCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHH
T ss_pred cccccccccccccCCeEEEccccccC--CCCCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHH
Confidence 02222 67999999999883 345799999886666654432111111 111 22223333322
Q ss_pred c--CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccc
Q psy12791 252 L--KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFR 329 (393)
Q Consensus 252 ~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 329 (393)
+ ..+....++..++.+.+.+.|+++ ++..+ .+ ..++++++.++ + ...+.+.+...+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~----------------~~~~~~~~~~~-~---~~~~~~~l~~~g 359 (397)
T 3f9t_A 302 LGREGQRKIVNECMENTLYLYKKLKEN-NFKPV-IE----------------PILNIVAIEDE-D---YKEVCKKLRDRG 359 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SC----------------CSSSEEEEECT-T---HHHHHHHHHHTT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-cC----------------CCccEEEEEeC-C---HHHHHHHHHhCC
Confidence 2 234456666777888888888876 33211 11 12577888874 3 233444443334
Q ss_pred cccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 330 CAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 330 ~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.+..|. .++++|++++..+++++++.+.++|+++.
T Consensus 360 i~v~~~~--------------------------~~~~~Ri~~~~~~~~e~i~~~~~~l~~~l 395 (397)
T 3f9t_A 360 IYVSVCN--------------------------CVKALRIVVMPHIKREHIDNFIEILNSIK 395 (397)
T ss_dssp CBCEECS--------------------------SSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred eEEeccC--------------------------CCCEEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 4443321 14899999999999999999999998764
No 134
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.95 E-value=4.5e-26 Score=216.31 Aligned_cols=306 Identities=16% Similarity=0.113 Sum_probs=212.9
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
+.+...++|+++|++++.++.+++++|++++ .++..+ +++||+|+++.|+|++ +...++..|++++.++.+
T Consensus 54 ~~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~ 129 (391)
T 3dr4_A 54 VGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIA----SANSVTYCGATPVLVDNDPRT 129 (391)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTH----HHHHHHHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHH----HHHHHHHCCCEEEEEecCccc
Confidence 3688999999999999999999999999898 777777 8999999999999996 455667789999999875
Q ss_pred ---CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC--CCCcCcEEEEccc--
Q psy12791 132 ---KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS--LPWGVDIVLYSLT-- 204 (393)
Q Consensus 132 ---d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~--~~~~~di~~~S~s-- 204 (393)
|++++++.+++++++|+ ++||||.+.|+++|.++|+++ |+++|+|++|+.+..... ...-.|+++.||+
T Consensus 130 ~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~~~~i~~l~~~~-~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~ 205 (391)
T 3dr4_A 130 FNLDAAKLEALITPRTKAIM---PVHLYGQICDMDPILEVARRH-NLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGN 205 (391)
T ss_dssp CSBCGGGSGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHT-TCEEEEECTTCTTCEETTEETTSSSSEEEEECBTT
T ss_pred cCcCHHHHHHhcCCCceEEE---EECCCCChhhHHHHHHHHHHc-CCEEEEECcccccceECCeeecccCCEEEEECCCC
Confidence 78999999988888888 678999999999999999999 999999999987543222 2222478888876
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHHHHhcC--------------CCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKFLQNSMG--------------VVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVA 270 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (393)
|+++ . | ++|+++++++++.+.++....... .......+.+....++.+....++..++.+.+.
T Consensus 206 K~l~-~-g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~ 282 (391)
T 3dr4_A 206 AIIT-T-G-EGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYE 282 (391)
T ss_dssp SSSC-C-B-SCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CcCC-c-C-CeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8884 2 3 599999887778887765543211 234555555555555666666777777888888
Q ss_pred HHHhhCCCcceEeC--CCCCCCcchHHHhhhcCCCcceEEEEEcCC-HHHHHHHHHhcCccccccccCCccccccCcccc
Q psy12791 271 KFLESHPCVKGVLH--PGLPSHPNHELAKSQWSGTSGMLSFYVNGG-AEETRIFLESLLIFRCAESLGGIESLADLPAEM 347 (393)
Q Consensus 271 ~~l~~~~~~~~v~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~ 347 (393)
+.|++. ++..... +.. ......++++.++.. ....+.+.+.|...++.++.|... +.+.+...
T Consensus 283 ~~L~~~-g~~~~~~~~~~~------------~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p-~~~~~~~~ 348 (391)
T 3dr4_A 283 QKLARL-GNRVTKPHVALT------------GRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHP-MHIMPPYA 348 (391)
T ss_dssp HHHGGG-TTSEECCCCCTT------------SCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCC-GGGSGGGG
T ss_pred HHhhcC-CccccCcCCCCC------------CcceeEEEEEEECCccchhHHHHHHHHHHCCCceeecCCc-cccChhhh
Confidence 888876 4432211 110 011124567777420 122344555554446665554321 12222111
Q ss_pred c--CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 348 T--HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 348 ~--~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
. ...++..... ..+.|||+++...++++++.+.++|+++.
T Consensus 349 ~~~~~~~~~~~~~----~~~~lrl~~~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 349 HLATDDLKIAEAC----GVDGLNLPTHAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp GGCCTTCHHHHHH----HHHEEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred hcCcCCChHHHHH----HhCeEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 1 1112221111 24789999999999999999999998764
No 135
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.95 E-value=5.5e-27 Score=221.25 Aligned_cols=314 Identities=14% Similarity=0.117 Sum_probs=204.7
Q ss_pred CCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC---cEEEeccH-HHHH-HHHHHhcCCCCeEEE
Q psy12791 28 CVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK---HGLCYSSG-LGAV-TAVTHLLSAGDHIIS 102 (393)
Q Consensus 28 ~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~---~~i~~~~G-~~al-~~~~~~~~~gd~vl~ 102 (393)
.+..|..+++.+.+++.+.... +.+.. ..+..+++++.+++++|.+ +.+++++| ++++ .++..++++||+|++
T Consensus 23 ~~pgp~~~~~~v~~a~~~~~~~-~~~~~-~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~ 100 (376)
T 3f0h_A 23 FTVGPVMSSEEVRAIGAEQVPY-FRTTE-FSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLV 100 (376)
T ss_dssp CSSSSCCCCHHHHHHHTSCCCC-CSSHH-HHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEE
T ss_pred ecCCCCCCcHHHHHHhcCCCCC-CCCHH-HHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEE
Confidence 4566777777777766554221 11111 1245678999999999986 34554555 6668 777788899999999
Q ss_pred cCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEE
Q psy12791 103 GDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILL 177 (393)
Q Consensus 103 ~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~l 177 (393)
++|.|.+.. +...+...|++++.++.+ |++++++.+++++++|++++|+||||.++|+++|.++|+++ |+++
T Consensus 101 ~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~l 177 (376)
T 3f0h_A 101 IDGGSFGHR--FVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIGEFCKKN-NMFF 177 (376)
T ss_dssp EESSHHHHH--HHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHHHHHHHHT-TCEE
T ss_pred EeCChhhHH--HHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceEEEEecccCCcceecCHHHHHHHHHHc-CCEE
Confidence 998776532 334567789888888764 78999998888999999999999999999999999999999 9999
Q ss_pred EEeCccCcccccCCCC-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH-----------------hcCCC
Q psy12791 178 VLDNTFLTAYYQKSLP-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN-----------------SMGVV 239 (393)
Q Consensus 178 ivDea~~~~~~~~~~~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~-----------------~~~~~ 239 (393)
|+|++++.+....... .++|+++.|+||+++|++| +|+++++ +++.+.+..... .....
T Consensus 178 i~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (376)
T 3f0h_A 178 VCDCVSAFLADPFNMNECGADVMITGSQKVLACPPG--ISVIVLA-PRGVERVEKSKVRTMYFDLKDALKNQERGQTPFT 254 (376)
T ss_dssp EEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCCSS--CEEEEEC-HHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSC
T ss_pred EEEcCccccCccccccccCccEEEecCcccccCCCc--eEEEEEC-HHHHHHhhcCCCCceeecHHHHHhhcccCCCCCC
Confidence 9999998654322221 3689999999999966888 6888887 787777653100 00112
Q ss_pred CCHHHHHHHHhccC------CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC
Q psy12791 240 PSPFDCWLVTRGLK------TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG 313 (393)
Q Consensus 240 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (393)
.+......+...++ .+....++..++++.+.+.|++++ +. + .+. .....++.+...+
T Consensus 255 ~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~-~-~~~--------------~~~~~~~~~~~~~ 317 (376)
T 3f0h_A 255 PAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLP-FE-L-VSE--------------SPANGVTSVHPTT 317 (376)
T ss_dssp CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSS-EE-E-CCS--------------SBBTTEEEEEESS
T ss_pred CcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-Cc-c-Ccc--------------ccCceEEEEeCCC
Confidence 22211111222221 134455555566666666666542 11 1 111 0112344444422
Q ss_pred CHHHHHHHHHhcCcc-ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 314 GAEETRIFLESLLIF-RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 314 ~~~~~~~~~~~l~~~-~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.....+.+.+... ++.+..|.. + ..++++|+|++...++++++.+.++|+++.
T Consensus 318 --~~~~~l~~~l~~~~gi~v~~g~~------~-----------------~~~~~lRis~~~~~t~e~i~~~~~~l~~~l 371 (376)
T 3f0h_A 318 --ANAYDIFLKLKDEYGIWICPNGG------E-----------------MKDTIFRVGHIGALTHEDNTTLVNAFKDLQ 371 (376)
T ss_dssp --SCHHHHHHHHHHHSSEECEECCG------G-----------------GTTTCEEEECCSSCCHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHhCCEEEecCcc------c-----------------cCCCEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 1223344444333 455444310 0 125799999999999999999999888764
No 136
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.95 E-value=4.4e-28 Score=228.71 Aligned_cols=313 Identities=14% Similarity=0.126 Sum_probs=203.3
Q ss_pred CCCC-CCCC--CCCc-cCCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCCcEEEecc-HHHHH-HHHHH---
Q psy12791 23 QWRS-QCVI--PPII-LSTTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLEEAKHGLCYSS-GLGAV-TAVTH--- 92 (393)
Q Consensus 23 ~~~~-~~~~--~p~~-~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~-G~~al-~~~~~--- 92 (393)
.++| +++. ++++ +++.+.+++.+.+.. .+....|+++...++++++|+++|.++.+++++ |++++ .++..
T Consensus 29 ~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~~ 108 (375)
T 2eh6_A 29 EYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARK 108 (375)
T ss_dssp EEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTTBCCHHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHHH
T ss_pred EEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCcccCCHHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHHH
Confidence 4567 4444 5776 666666554332110 011123456788999999999999854455555 45566 44432
Q ss_pred hc---CCC-CeEEEcCCCccchHHHHHHhccc----CCcE-----EEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 93 LL---SAG-DHIISGDDVYGGTYRYFAQVAPK----IGLE-----VDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 93 ~~---~~g-d~vl~~~~~y~~~~~~~~~~~~~----~g~~-----v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
+. ++| |+|++++|+|++........... .|.. +..++..|++++++.+++++++|++++|+||||.+
T Consensus 109 ~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~ 188 (375)
T 2eh6_A 109 YWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVN 188 (375)
T ss_dssp HHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSE
T ss_pred HhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCc
Confidence 34 778 99999999998753322222111 1222 66777779999999998889999999999999999
Q ss_pred cC----HHHHHHHHHhCCCcEEEEeCccCcccc-cCCC---CCc--CcEEEEcccccccCCCCceEEEEEecChHHHHHH
Q psy12791 160 FD----VKAISAVVKQHPDILLVLDNTFLTAYY-QKSL---PWG--VDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 160 ~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~~---~~~--~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~ 229 (393)
++ +++|.++|+++ |+++|+||+|+++.. ..+. ..+ .|++ |+||++ | +|+|+||++++ +++++.+
T Consensus 189 ~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~--s~SK~~-~-~g~~~G~~~~~-~~~~~~~ 262 (375)
T 2eh6_A 189 EASEDFLSKLQEICKEK-DVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVI--ALAKGL-G-GGVPIGAILAR-EEVAQSF 262 (375)
T ss_dssp ECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGG-G-TTSCCEEEEEE-HHHHTTC
T ss_pred CCCHHHHHHHHHHHHHh-CCEEEEeccccCCCCCCcchhhhhcCCCCCEE--EEcccc-c-CCCCeEEEEEc-HHHHhhh
Confidence 88 99999999999 999999999995321 1111 123 6766 677999 4 58999999998 6777665
Q ss_pred HHHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEE
Q psy12791 230 KFLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSF 309 (393)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+..........++..+..+...++......++..++.+.+.+.|++++. ..+ .+.+.++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~-~~~------------------~~~g~~~~~ 323 (375)
T 2eh6_A 263 TPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGNYFKEKLKELGK-GKV------------------KGRGLMLGL 323 (375)
T ss_dssp CTTSCCCSSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-SEE------------------EEETTEEEE
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCc------------------eEEEEEEEE
Confidence 4311111223356665555554544434556666777778888876543 111 112578888
Q ss_pred EEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 310 YVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
.++++ ...+.+.+...++.+..+ .++++|++++...++++++.+.++|++
T Consensus 324 ~~~~~---~~~~~~~l~~~gi~~~~~---------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~ 373 (375)
T 2eh6_A 324 ELERE---CKDYVLKALEKGLLINCT---------------------------AGKVLRFLPPLIIQKEHIDRAISVLRE 373 (375)
T ss_dssp ECSSC---CHHHHHHHHHTTEECEEE---------------------------TTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEcCc---HHHHHHHHHHCCCEEecC---------------------------CCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 88532 223333333233333221 157899999988899989998888876
Q ss_pred h
Q psy12791 390 A 390 (393)
Q Consensus 390 ~ 390 (393)
+
T Consensus 374 ~ 374 (375)
T 2eh6_A 374 I 374 (375)
T ss_dssp H
T ss_pred h
Confidence 4
No 137
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.95 E-value=1.1e-25 Score=210.63 Aligned_cols=317 Identities=15% Similarity=0.097 Sum_probs=208.2
Q ss_pred cCCCCCCCCCCCCCCCCccCCeeeeCCCCCCCCCccccCC-CCchHHHHHHHHHHHhCCCcE-EEeccHHHHH-HHHHHh
Q psy12791 17 IGSEPDQWRSQCVIPPIILSTTFKQNTPGQPPQGFEYSRS-NNPTRRNLERCIASLEEAKHG-LCYSSGLGAV-TAVTHL 93 (393)
Q Consensus 17 ~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~-~~~~~~~lr~~la~~~~~~~~-i~~~~G~~al-~~~~~~ 93 (393)
||...++.+|-++.++..+++.+.+++.+.... +. ..| .++...++++.+++++|.+.+ +++++|++++ .++..+
T Consensus 2 ~~~~~~~~id~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~~~~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~ 79 (356)
T 1v72_A 2 GETSRPPALGFSSDNIAGASPEVAQALVKHSSG-QA-GPYGTDELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAM 79 (356)
T ss_dssp ----CCCCCBCSCGGGCCCCHHHHHHHHHTTSS-CC-CSTTCSHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTS
T ss_pred CCCCCCceEeeccCCccCCCHHHHHHHHhhccC-cc-cccccchHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHh
Confidence 455556778822346666777776665444221 11 223 357788999999999995454 5556677777 777777
Q ss_pred cCCCCeEEEcCCCccchHHHHHHhcccC--CcEEEeeCCC----CHHHHHh-hcCC-------CCcEEEEecCCCCcccc
Q psy12791 94 LSAGDHIISGDDVYGGTYRYFAQVAPKI--GLEVDFVDLR----KIENLIK-YIKP-------NTKMVWIENPTNPLMTV 159 (393)
Q Consensus 94 ~~~gd~vl~~~~~y~~~~~~~~~~~~~~--g~~v~~~~~~----d~~~l~~-~l~~-------~~~~v~l~~p~nptG~~ 159 (393)
.++||+|+++.|+|.+++.. ..+... |.+++.++.+ |++++++ .+.+ ++++|++++|+| ||.+
T Consensus 80 ~~~gd~vi~~~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~ 156 (356)
T 1v72_A 80 TPPWGNIYCHPASHINNDEC--GAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSI 156 (356)
T ss_dssp CCTTEEEEECTTSHHHHSST--THHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCC
T ss_pred cCCCCEEEEcCccchhhhhc--hHHHHHhCCcEEEEecCCCCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCcc
Confidence 88999999999998753211 013444 8999999875 7999999 8875 589999999987 9997
Q ss_pred cC---HHHHHHHHHhCCCcEEEEeCccCcccc---c-CCCC----CcCcEEEEcccccccCCCCceEEEEEecChHHHHH
Q psy12791 160 FD---VKAISAVVKQHPDILLVLDNTFLTAYY---Q-KSLP----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQAR 228 (393)
Q Consensus 160 ~~---~~~l~~l~~~~~~~~livDea~~~~~~---~-~~~~----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~ 228 (393)
++ +++|.++|+++ |+++|+|++|..+.. . .+.. .+.|+++.|+||+ +++.| .||++++ +++.+.
T Consensus 157 ~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G--~g~~~~~-~~~~~~ 231 (356)
T 1v72_A 157 YTLDEIEAIGDVCKSS-SLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAA--EAIVLFN-TSLATE 231 (356)
T ss_dssp CCHHHHHHHHHHHHHT-TCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSC--EEEEESS-GGGHHH
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCc--cEEEEEC-HHHHhh
Confidence 76 78899999999 999999999975321 1 1211 2578889999999 34433 5688886 788887
Q ss_pred HHHHHHhcCCCCC--HHHHHHHHhccCC--HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCc
Q psy12791 229 LKFLQNSMGVVPS--PFDCWLVTRGLKT--LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTS 304 (393)
Q Consensus 229 ~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~ 304 (393)
++......+.... ........+.++. +....++..++.+.+.+.|++++++.. ..|. .+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~----------------~~ 294 (356)
T 1v72_A 232 MSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEV-LGGT----------------EA 294 (356)
T ss_dssp HHHHHHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEE-ESCC----------------CS
T ss_pred HHHHhhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEE-ccCC----------------Cc
Confidence 7655443333222 2222222333332 333456667777888888887666542 2232 24
Q ss_pred ceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHH
Q psy12791 305 GMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLD 384 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~ 384 (393)
.++++.++ . .+.+.+...++.+..|. + + ++++|++++...++++++.+.
T Consensus 295 ~~~~~~~~--~----~~~~~l~~~gi~v~~g~-~----------------------~--~~~iRi~~~~~~~~~~i~~~~ 343 (356)
T 1v72_A 295 NILFCRLD--S----AMIDALLKAGFGFYHDR-W----------------------G--PNVVRFVTSFATTAEDVDHLL 343 (356)
T ss_dssp SEEEEEEC--H----HHHHHHHHTTCBCBCSS-S----------------------S--TTEEEEECCTTCCHHHHHHHH
T ss_pred cEEEEEcC--H----HHHHHHHhcCeEEeccc-c----------------------C--CCeEEEEecCCCCHHHHHHHH
Confidence 67888883 2 34444433344444332 0 1 478999999999999999998
Q ss_pred HHHHHhh
Q psy12791 385 QALRKAC 391 (393)
Q Consensus 385 ~al~~~~ 391 (393)
++|+++.
T Consensus 344 ~~l~~~l 350 (356)
T 1v72_A 344 NQVRLAA 350 (356)
T ss_dssp HHHHHTC
T ss_pred HHHHHHH
Confidence 8887653
No 138
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.95 E-value=3.4e-26 Score=219.49 Aligned_cols=349 Identities=16% Similarity=0.139 Sum_probs=216.9
Q ss_pred ccceeeccCCCCCCCCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCC--chHHHHHHHHHHHhCCCcEEEeccHHHH
Q psy12791 10 FATKAVHIGSEPDQWRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNN--PTRRNLERCIASLEEAKHGLCYSSGLGA 86 (393)
Q Consensus 10 ~~~~~~~~g~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~--~~~~~lr~~la~~~~~~~~i~~~~G~~a 86 (393)
..+.+++||.+.... + +.+.+++.+++.+.+++.+.+ ...+|+. +...++|+++|++++.++.+++++|+++
T Consensus 5 ~~~~~~~gg~~~~~~-~l~~~~p~~~~p~~~~~a~~~~~----~~~~y~~~~~~~~~l~~~la~~~~~~~v~~~~ggt~a 79 (424)
T 2po3_A 5 LSDLAFFGGPAAFDQ-PLLVGRPNRIDRARLYERLDRAL----DSQWLSNGGPLVREFEERVAGLAGVRHAVATCNATAG 79 (424)
T ss_dssp TTTCGGGTCCCSCSS-CEETTCCCCCCHHHHHHHHHHHH----HHTCCSSSCHHHHHHHHHHHHHHTSSEEEEESCHHHH
T ss_pred hhhhhhhcCCccccc-cccccCCCCCChHHHHHHHHHHH----hcCCcccCCHHHHHHHHHHHHHhCCCeEEEeCCHHHH
Confidence 346778999774321 3 577888877666665543321 1223543 7889999999999998766666666667
Q ss_pred H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 87 V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 87 l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
+ .++..+ .+||+|++++|+|++ +...++..|++++.++.+ |++++++.+++++++|++++ |||..
T Consensus 80 l~~~l~~l-~~gd~Vlv~~~~~~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~ 151 (424)
T 2po3_A 80 LQLLAHAA-GLTGEVIMPSMTFAA----TPHALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGVH---LWGRP 151 (424)
T ss_dssp HHHHHHHH-TCCSEEEEESSSCTH----HHHHHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEEC---GGGCC
T ss_pred HHHHHHHc-CCCCEEEECCCccHH----HHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcCCcEEEEEC---CCCCc
Confidence 7 555554 478999999999996 445667789999999874 78999999988899999864 89999
Q ss_pred cCHHHHHHHHHhCCCcEEEEeCccCccc-cc-CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcC
Q psy12791 160 FDVKAISAVVKQHPDILLVLDNTFLTAY-YQ-KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMG 237 (393)
Q Consensus 160 ~~~~~l~~l~~~~~~~~livDea~~~~~-~~-~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 237 (393)
.++++|.++|+++ |+++|+|++|+.+. +. .++....|+++.||||.. +++|.|+||++++++++++.++.......
T Consensus 152 ~~l~~i~~la~~~-~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K-~l~~~~~G~~v~~~~~l~~~l~~~~~~~~ 229 (424)
T 2po3_A 152 CAADQLRKVADEH-GLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATK-AVNAFEGGAVVTDDADLAARIRALHNFGF 229 (424)
T ss_dssp CCHHHHHHHHHHT-TCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTS-SSCCSSCEEEEESCHHHHHHHHHHHBTTT
T ss_pred CCHHHHHHHHHHc-CCEEEEECccccCCeECCeecccccCEEEEeCCCCC-CccCCCCeEEEeCCHHHHHHHHHHHhcCc
Confidence 9999999999999 99999999999533 21 122222579999999444 24446899999976788888776543211
Q ss_pred ------------CCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCC--
Q psy12791 238 ------------VVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGT-- 303 (393)
Q Consensus 238 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~-- 303 (393)
...++..+..+...++.+....++..++.+.+.+.|++++++.....+. .+.
T Consensus 230 ~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~--------------~~~~~ 295 (424)
T 2po3_A 230 DLPGGSPAGGTNAKMSEAAAAMGLTSLDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDR--------------HGLNN 295 (424)
T ss_dssp TCTTCCTTCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGG--------------GSCCC
T ss_pred cccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCC--------------CCccc
Confidence 1224455555444444444445555556666667776555543111011 001
Q ss_pred cceEEEEEcCC--HHHHHHHHHhcCccccccccCCccccccCccccc--CCCCChhhHhhcCCCCCeEEEEecCCChHHH
Q psy12791 304 SGMLSFYVNGG--AEETRIFLESLLIFRCAESLGGIESLADLPAEMT--HKSIPKETRDALGITDNLVRLSVGVEGYTDL 379 (393)
Q Consensus 304 ~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~--~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~ 379 (393)
..++++.+++. ....+.+.+.+...++.+...........+.... ....+..... ....||++++...++++
T Consensus 296 ~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~----~~~~l~l~~~~~~t~e~ 371 (424)
T 2po3_A 296 HQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERL----AARVLSLPTGTAIGDDD 371 (424)
T ss_dssp CCCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHH----HTTEEEECCSTTCCHHH
T ss_pred cEEEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHH----hcCEEEeeCCCCCCHHH
Confidence 14566777410 0123334444443344443310000000000000 0000111110 13457888778999999
Q ss_pred HHHHHHHHHHhh
Q psy12791 380 IADLDQALRKAC 391 (393)
Q Consensus 380 i~~l~~al~~~~ 391 (393)
++.+.++|+++.
T Consensus 372 i~~~~~~L~~~~ 383 (424)
T 2po3_A 372 IRRVADLLRLCA 383 (424)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988887653
No 139
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.95 E-value=1.9e-26 Score=217.46 Aligned_cols=227 Identities=11% Similarity=0.093 Sum_probs=163.7
Q ss_pred CCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCC---CcEEEeccHHHHH-HHHHHhcCCCC
Q psy12791 24 WRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEA---KHGLCYSSGLGAV-TAVTHLLSAGD 98 (393)
Q Consensus 24 ~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~---~~~i~~~~G~~al-~~~~~~~~~gd 98 (393)
++| +...+|...++.+.+++. .|.. +.....++++.+++++|. ++.+++++|++++ .++..+ +||
T Consensus 30 v~~~~~~~~~~~~~~~v~~a~~-------~~~~-~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~--~gd 99 (374)
T 2aeu_A 30 LYDLSGLSGGFLIDEKDKALLN-------TYIG-SSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL--KPK 99 (374)
T ss_dssp CEECSSCCCCCCCCHHHHHHHT-------STTH-HHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH--CCS
T ss_pred eeeecccCCCCCCCHHHHHHHH-------HhcC-chHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC--CCC
Confidence 445 333445555555555543 1111 122345677777888898 4567777777777 666655 999
Q ss_pred eEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcE-EEEecCCCCcc-cccCHHHHHHHHHhCCCcE
Q psy12791 99 HIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKM-VWIENPTNPLM-TVFDVKAISAVVKQHPDIL 176 (393)
Q Consensus 99 ~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~-v~l~~p~nptG-~~~~~~~l~~l~~~~~~~~ 176 (393)
+|+++.|+|++++..+. .++..|++++.+ .|++++++. .+++++ |++++|||||| ...++++|.++|+++ |++
T Consensus 100 ~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v--~d~~~l~~~-~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~-~~~ 174 (374)
T 2aeu_A 100 KVIHYLPELPGHPSIER-SCKIVNAKYFES--DKVGEILNK-IDKDTLVIITGSTMDLKVIELENFKKVINTAKNK-EAI 174 (374)
T ss_dssp EEEEECSSSSCCTHHHH-HHHHTTCEEEEE--SCHHHHHTT-CCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHH-TCC
T ss_pred EEEEecCCCCccHHHHH-HHHHcCcEEEEe--CCHHHHHhc-CCCccEEEEEccCCCCCCCCcccHHHHHHHHHHc-CCE
Confidence 99999999988665554 567889999988 589999988 778999 99999999999 888899999999999 999
Q ss_pred EEEeCccCcccc--c-C--CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Q psy12791 177 LVLDNTFLTAYY--Q-K--SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRG 251 (393)
Q Consensus 177 livDea~~~~~~--~-~--~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (393)
+|+||+|+.+.. . . +...+.|++++|+||+++| +|+||++++ +++++.++.....++...++..+..+...
T Consensus 175 li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g---~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~a 250 (374)
T 2aeu_A 175 VFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEG---PRGGLLAGK-KELVDKIYIEGTKFGLEAQPPLLAGIYRA 250 (374)
T ss_dssp EEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSS---CSCEEEEEE-HHHHHHHHHHHHTTTCBCCHHHHHHHHHH
T ss_pred EEEECCcccccccccccCCccccCCcEEEecCcccccC---cceEEEEEC-HHHHHHHHHhhccccCCCCHHHHHHHHHH
Confidence 999999987641 1 1 2334679999999999743 579999997 88999888777666666677766655554
Q ss_pred cCCHH-HHHHHHHHHHHHH
Q psy12791 252 LKTLP-CRLKEHERGSIEV 269 (393)
Q Consensus 252 ~~~~~-~~~~~~~~~~~~l 269 (393)
++.+. .+++++.++.+.+
T Consensus 251 l~~~~~~~~~~~~~~~~~~ 269 (374)
T 2aeu_A 251 LKNFNLERIRKAFERAKNF 269 (374)
T ss_dssp HHHCCHHHHHHHHHHHHHC
T ss_pred HHHHhHHHHHHHHHHHHHH
Confidence 43222 2445555555444
No 140
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=3.7e-26 Score=216.07 Aligned_cols=314 Identities=17% Similarity=0.205 Sum_probs=205.0
Q ss_pred CCCCCccCCeeeeCCCCCCCCCccccCCCC--chHHHHHHHHHHHhCCC-----cEEEeccH-HHHH-HHHHHhc---CC
Q psy12791 29 VIPPIILSTTFKQNTPGQPPQGFEYSRSNN--PTRRNLERCIASLEEAK-----HGLCYSSG-LGAV-TAVTHLL---SA 96 (393)
Q Consensus 29 ~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~--~~~~~lr~~la~~~~~~-----~~i~~~~G-~~al-~~~~~~~---~~ 96 (393)
..+|...++.+.+++.+.... + + ++. ....++++.++++++.. +.+++++| ++++ .++..+. ++
T Consensus 10 ~p~p~~~~~~v~~a~~~~~~~-~-~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~ 85 (385)
T 2bkw_A 10 IPGPIILSGAVQKALDVPSLG-H-T--SPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAP 85 (385)
T ss_dssp SSSSCCCCHHHHHTTSCCCCC-T-T--SHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCS
T ss_pred cCCCcCchHHHHHHHhccccc-c-C--CHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCC
Confidence 344666666777776554221 1 1 221 24677899999998763 56666655 5567 6667776 89
Q ss_pred CCeEEEcC-CCccchHHHHHHhcccCCcEEEeeCC-C-----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHH
Q psy12791 97 GDHIISGD-DVYGGTYRYFAQVAPKIGLEVDFVDL-R-----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAV 168 (393)
Q Consensus 97 gd~vl~~~-~~y~~~~~~~~~~~~~~g~~v~~~~~-~-----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l 168 (393)
||+|++++ +.|+.. +...++..|++++.++. + |++++++.+++ ++++|++++|+||||.++|+++|.++
T Consensus 86 gd~vlv~~~~~~~~~---~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~ 162 (385)
T 2bkw_A 86 NKNVLVVSTGTFSDR---FADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQA 162 (385)
T ss_dssp CCEEEEECSSHHHHH---HHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHH
T ss_pred CCeEEEEcCCcchHH---HHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHH
Confidence 99998874 455532 23456778999999988 4 78999998876 79999999999999999999999999
Q ss_pred HHhC-CCcEEEEeCccCcccccCCC-CCcCcEEEEcccccccCCCCceEEEEEecChHHHH-HHH---------------
Q psy12791 169 VKQH-PDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQA-RLK--------------- 230 (393)
Q Consensus 169 ~~~~-~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~-~~~--------------- 230 (393)
|+++ +|+++|+|++|+.+....++ ..++|+++.|+||+++|++| +||++++ +++++ .++
T Consensus 163 ~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G--~G~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~ 239 (385)
T 2bkw_A 163 IKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAG--LSISLCS-SRFMDYALNDSKNGHVHGYFSSLR 239 (385)
T ss_dssp HHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSC--EEEEEEC-HHHHHHHTCHHHHCCCSCSTTCHH
T ss_pred HHhhCCCCEEEEECccccCCccccccccCceEEEecCccccccCCc--ceEEEEc-HHHHHHHHhhccCCCCCceeecHH
Confidence 9997 48999999999865432222 24689999999998867888 5999997 66655 431
Q ss_pred ---HH--HHhcC-----CCCCHHHHHHHHhccCC-----HHHHHHHHHHHHHHHHHHH-hhCCCcceEeCCCCCCCcchH
Q psy12791 231 ---FL--QNSMG-----VVPSPFDCWLVTRGLKT-----LPCRLKEHERGSIEVAKFL-ESHPCVKGVLHPGLPSHPNHE 294 (393)
Q Consensus 231 ---~~--~~~~~-----~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l-~~~~~~~~v~~~~l~~~~~~~ 294 (393)
.. ....+ ...+......+...++. +...+++..++++.+.+.| +++ ++. +..+. +..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~~-~~~~~-~~~---- 312 (385)
T 2bkw_A 240 RWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL-QLT-SVSRY-PSN---- 312 (385)
T ss_dssp HHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT-CCE-ESSCS-SST----
T ss_pred HHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc-Cce-ecccC-ccc----
Confidence 11 11111 23444443332222222 3445666677788888888 765 332 21111 000
Q ss_pred HHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEE-ecC
Q psy12791 295 LAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLS-VGV 373 (393)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls-~~~ 373 (393)
...+.+++|.++ + ...+.+.|...++.+..|..+. ..++++|+| ++.
T Consensus 313 ------~~~~~~~~~~~~-~---~~~~~~~l~~~gi~v~~g~~~~----------------------~~~~~iRis~~~~ 360 (385)
T 2bkw_A 313 ------MSAHGLTAVYVA-D---PPDVIAFLKSHGVVIAGGIHKD----------------------IGPKYIRIGHMGV 360 (385)
T ss_dssp ------TBCSSCEEEECS-C---HHHHHHHHHHTTEECBCCCCTT----------------------TGGGEEEECCCGG
T ss_pred ------ccCCceEEEecC-C---HHHHHHHHHHCCeEEeCCCCcc----------------------cCCCEEEEEcccc
Confidence 012578888884 3 3445555544466655543210 125789999 773
Q ss_pred ---CChHHHHHHHHHHHHHhh
Q psy12791 374 ---EGYTDLIADLDQALRKAC 391 (393)
Q Consensus 374 ---~~~~~~i~~l~~al~~~~ 391 (393)
..++++++.+.++|+++.
T Consensus 361 ~~~~~~~e~i~~~~~~l~~~~ 381 (385)
T 2bkw_A 361 TACNKNLPYMKNCFDLIKLAL 381 (385)
T ss_dssp GTSSTTCTHHHHHHHHHHHHT
T ss_pred ccccCCHHHHHHHHHHHHHHH
Confidence 467778888888887664
No 141
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.94 E-value=3.1e-26 Score=214.64 Aligned_cols=287 Identities=13% Similarity=0.043 Sum_probs=193.6
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCC--eEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGD--HIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd--~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
++...+|++++|+++|.+..+++++|++++ .++..++.+|| .|+++.+.|...+. ........|++++.++.+
T Consensus 46 ~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~ 124 (357)
T 3lws_A 46 GAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHE-QDGLKELHPIETILVGAADRL 124 (357)
T ss_dssp ETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSS-TTHHHHHSSCEEEECSCTTSC
T ss_pred ChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeec-cchhhhccCcEEEEecCCCCC
Confidence 478899999999999998889999999887 77777788888 67776666543211 011234568999998864
Q ss_pred -CHHHHHhhcCCCCcEEEEecCCCCc-ccccC---HHHHHHHHHhCCCcEEEEeCccCcc---cccCC---CCCcCcEEE
Q psy12791 132 -KIENLIKYIKPNTKMVWIENPTNPL-MTVFD---VKAISAVVKQHPDILLVLDNTFLTA---YYQKS---LPWGVDIVL 200 (393)
Q Consensus 132 -d~~~l~~~l~~~~~~v~l~~p~npt-G~~~~---~~~l~~l~~~~~~~~livDea~~~~---~~~~~---~~~~~di~~ 200 (393)
|+++++++. ++++|++++||||| |.+++ +++|.++|+++ |++||+|++|... ....+ +....|+++
T Consensus 125 ~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~ 201 (357)
T 3lws_A 125 MTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRER-GIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIY 201 (357)
T ss_dssp CCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHT-TCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEE
T ss_pred cCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHc-CCEEEEECchhhhhhhhcCCChHHHHhcCCEEE
Confidence 789998873 48999999999998 99887 88899999999 9999999998721 11111 112467889
Q ss_pred EcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCC--CHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCC
Q psy12791 201 YSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVP--SPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPC 278 (393)
Q Consensus 201 ~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (393)
.|+||+++|+.| ||++++ +++++.++......+... ....+..+...++....++++..++++.+.+.|+++++
T Consensus 202 ~s~sK~~~~~~g---g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g 277 (357)
T 3lws_A 202 ISFYKGLGGIAG---AILAGP-AAFCQTARIWKRRYGGDLISLYPYIVSADYYYELRKDRMGQYYEQAKQLAEQFNALPG 277 (357)
T ss_dssp EESSSTTCCSSC---EEEEEC-HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTT
T ss_pred EeccccCCCCce---EEEEcC-HHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999965554 999887 889888876665544322 22222222222322223444556777888999988877
Q ss_pred cceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH-HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhH
Q psy12791 279 VKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA-EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETR 357 (393)
Q Consensus 279 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~ 357 (393)
+.....|. .++++++.+++.. ...+.+.+.+...++.+..|..+. +
T Consensus 278 ~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~----~------------- 324 (357)
T 3lws_A 278 VHTTPEVP----------------VSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDK----D------------- 324 (357)
T ss_dssp EEEESSSC----------------SSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEEC----S-------------
T ss_pred CeeccCCC----------------cceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccC----C-------------
Confidence 65222222 2578899886432 235566666665667666653211 1
Q ss_pred hhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 358 DALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 358 ~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..+++|++++........+.+.++++.+
T Consensus 325 -----~~~~~r~~i~~~~~~~~~~~l~~al~~l 352 (357)
T 3lws_A 325 -----GYCSTEISVGDAYGELDQQTRDAGFARL 352 (357)
T ss_dssp -----SEEEEEEEBCTTGGGSCHHHHHHHHHHH
T ss_pred -----CceEEEEEecchhhhcCHHHHHHHHHHH
Confidence 1468999998765433344555555544
No 142
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.94 E-value=7.4e-26 Score=214.81 Aligned_cols=307 Identities=16% Similarity=0.151 Sum_probs=209.9
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
+.+...++|+++|++++.++.+++++|++++ .++..+ +++||+|++++|+|++ +...++..|++++.++.+
T Consensus 37 ~~~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~v~~~~~~ 112 (393)
T 1mdo_A 37 TGPKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVS----TLNMIVLLGANPVMVDVDRDT 112 (393)
T ss_dssp SSHHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHH----HHHHHHHTTCEEEEECBCTTT
T ss_pred CChHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHh----HHHHHHHCCCEEEEEeccCCc
Confidence 4578899999999999998888888888888 777777 8999999999999986 445667789999998863
Q ss_pred ---CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCc-CcEEEEccc--c
Q psy12791 132 ---KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWG-VDIVLYSLT--K 205 (393)
Q Consensus 132 ---d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~-~di~~~S~s--K 205 (393)
|++++++.+++++++|+++ ||||.+.++++|.++|+++ |+++|+|++|+.+........+ .|+++.|+| |
T Consensus 113 ~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~~~~i~~l~~~~-~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K 188 (393)
T 1mdo_A 113 LMVTPEHIEAAITPQTKAIIPV---HYAGAPADLDAIYALGERY-GIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIK 188 (393)
T ss_dssp CCBCHHHHHHHCCTTEEEECCB---CGGGCCCCHHHHHHHHHHH-TCCBCEECTTCTTCEETTEETTSSSEEEEECCTTS
T ss_pred CCCCHHHHHHhcCCCceEEEEe---CCCCCcCCHHHHHHHHHHc-CCeEEEECccccCCeECCeecCCCCeEEEeCCCCC
Confidence 7899999998889998875 4899999999999999999 9999999999975322111234 899999999 7
Q ss_pred cccCCCCceEEEEEecChHHHHHHHHHHHhc----------------------C--CCCCHHHHHHHHhccCCHHHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKFLQNSM----------------------G--VVPSPFDCWLVTRGLKTLPCRLKE 261 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~----------------------~--~~~~~~~~~~~~~~~~~~~~~~~~ 261 (393)
+++ |.|+||++++++++.+.++...... | ...++..+.++...++.+....++
T Consensus 189 ~l~---~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~ 265 (393)
T 1mdo_A 189 NIT---CAEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNAR 265 (393)
T ss_dssp SSC---SSSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHH
T ss_pred ccc---cccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 773 2379999997678888776543210 0 113455555555555566666677
Q ss_pred HHHHHHHHHHHHhhCCCcceEe-CCCCCCCcchHHHhhhcCCCcceEEEEEcCC--HHHHHHHHHhcCccccccccCCcc
Q psy12791 262 HERGSIEVAKFLESHPCVKGVL-HPGLPSHPNHELAKSQWSGTSGMLSFYVNGG--AEETRIFLESLLIFRCAESLGGIE 338 (393)
Q Consensus 262 ~~~~~~~l~~~l~~~~~~~~v~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~g~~~ 338 (393)
..++.+.+.+.|.+.+ +. +. .+.. . ....+.+++|.++.. ......+.+.+...++.++.|..+
T Consensus 266 ~~~~~~~l~~~L~~~~-~~-~~~~~~~-~----------~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~ 332 (393)
T 1mdo_A 266 RAAIAAQYHQAMADLP-FQ-PLSLPSW-E----------HIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRA 332 (393)
T ss_dssp HHHHHHHHHHHHHTSS-CE-ECCCCSS-C----------EECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCC
T ss_pred HHHHHHHHHHHHhcCC-cc-cccCCCC-C----------CCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCc
Confidence 7777888888888765 32 21 1100 0 011234688888410 012344555555456666655432
Q ss_pred ccccCccccc---CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 339 SLADLPAEMT---HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 339 s~~~~~~~~~---~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
... .+.... ....+.... ...+.+|++++...++++++.+.++|+++.+
T Consensus 333 ~~~-~~~~~~~~~~~~~~~~~~----~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~ 384 (393)
T 1mdo_A 333 AHT-QKYYRERFPTLTLPDTEW----NSERICSLPLFPDMTESDFDRVITALHQIAG 384 (393)
T ss_dssp GGG-SHHHHHHSTTCCCHHHHH----HHTTEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred ccc-ChhhhccCCccCChhHHH----HHhCEEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 100 000000 000111000 0146899999999999999999999987653
No 143
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.94 E-value=3e-25 Score=212.57 Aligned_cols=304 Identities=16% Similarity=0.129 Sum_probs=206.1
Q ss_pred HHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------C
Q psy12791 61 RRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------K 132 (393)
Q Consensus 61 ~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d 132 (393)
..++++.+++++|.++.+++++|++++ .++.++ +++||+|+++.|+|.+ +...++..|++++.++.+ |
T Consensus 44 ~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~d 119 (418)
T 2c81_A 44 ERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIA----TATAVLNVNALPVFVDVEADTYCID 119 (418)
T ss_dssp HHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTH----HHHHHHHTTCEEEEECBCTTTCSBC
T ss_pred HHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHh----HHHHHHHcCCEEEEEecCCCCCCcC
Confidence 889999999999999999999999888 777777 7899999999999996 445567889999998874 7
Q ss_pred HHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccc-cc-CCCCCcCcEEEEcc--ccccc
Q psy12791 133 IENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAY-YQ-KSLPWGVDIVLYSL--TKYMN 208 (393)
Q Consensus 133 ~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~-~~-~~~~~~~di~~~S~--sK~~~ 208 (393)
++++++.+++++++|+++ ||||...++++|.++|+++ |+++|+|++|+.+. +. .+...-.|+++.|| ||++
T Consensus 120 ~~~l~~~i~~~~~~v~~~---~~~G~~~~~~~i~~~~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~~~~~s~s~~K~~- 194 (418)
T 2c81_A 120 PQLIKSAITDKTKAIIPV---HLFGSMANMDEINEIAQEH-NLFVIEDCAQSHGSVWNNQRAGTIGDIGAFSCQQGKVL- 194 (418)
T ss_dssp HHHHGGGCCTTEEEECCB---CCTTCCCCHHHHHHHHHHT-TCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSS-
T ss_pred HHHHHHhhCCCCeEEEEe---CCcCCcccHHHHHHHHHHC-CCEEEEECcccccCccCCEecccccceEEEeccCCccc-
Confidence 899999998889998864 5899999999999999999 99999999999875 32 12222236888888 9999
Q ss_pred CCCCceEEEEEecChHHHHHHHHHHHhc--------------C------C------CCCHHHHHHHHhccCCHHHHHHHH
Q psy12791 209 GHSDVVMGATVTNDDSLQARLKFLQNSM--------------G------V------VPSPFDCWLVTRGLKTLPCRLKEH 262 (393)
Q Consensus 209 G~~G~r~G~~~~~~~~~~~~~~~~~~~~--------------~------~------~~~~~~~~~~~~~~~~~~~~~~~~ 262 (393)
|+ | |+||++++++++.+.++...... . . ...+..+.+....++.+....++.
T Consensus 195 ~~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~ 272 (418)
T 2c81_A 195 TA-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNAIR 272 (418)
T ss_dssp CS-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHHHHHHHH
T ss_pred CC-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 56 7 89999996678888776544321 0 0 023344444445566677777777
Q ss_pred HHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC---CHHHHHHHHHhcCcc-ccc---cccC
Q psy12791 263 ERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG---GAEETRIFLESLLIF-RCA---ESLG 335 (393)
Q Consensus 263 ~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~-~~~---~~~g 335 (393)
.++.+.+.+.|..++++.....+. . .. ...-.++.+.+++ .....+.+.+.|... ++. ++.|
T Consensus 273 ~~~~~~l~~~L~~~~g~~~~~~~~--~-~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~ 341 (418)
T 2c81_A 273 EKNAMFLNDALSKIDGIKVMKRPP--Q-VS--------RQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPP 341 (418)
T ss_dssp HHHHHHHHHHHTTSTTEEECCCCT--T-EE--------ECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECC
T ss_pred HHHHHHHHHHhccCCCcccCCCCC--C-Cc--------ccccEEEEEEEccccccccCHHHHHHHHHHcCCCCccccccc
Confidence 788888888998776654211111 0 00 0001245577741 011233444544433 444 4444
Q ss_pred CccccccCcccccC------------------CCCChhhHhhcCCCCCeEEEEecCCC-hHHHHHHHHHHHHHhh
Q psy12791 336 GIESLADLPAEMTH------------------KSIPKETRDALGITDNLVRLSVGVEG-YTDLIADLDQALRKAC 391 (393)
Q Consensus 336 ~~~s~~~~~~~~~~------------------~~~~~~~~~~~g~~~~~iRls~~~~~-~~~~i~~l~~al~~~~ 391 (393)
... ....+..... ..++..+.. ..+.|||+++..+ ++++++.+.++|+++.
T Consensus 342 ~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lrl~~~~~~gt~edi~~~~~~l~~~~ 411 (418)
T 2c81_A 342 YLP-VHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERA----SGQSIVIHHAILLAEPSHLSLLVDAVAELA 411 (418)
T ss_dssp CCC-GGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHH----HHHEEEEEGGGGGSCHHHHHHHHHHHHHHH
T ss_pred ccc-cccCchhcccccccccccccccccccccCCChHHHHH----HhCEEEecCCccCCCHHHHHHHHHHHHHHH
Confidence 311 1111100000 001111000 1368999999999 9999999999998764
No 144
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.94 E-value=8.3e-26 Score=218.27 Aligned_cols=214 Identities=11% Similarity=0.059 Sum_probs=156.8
Q ss_pred CCchHHHHHHHHHHHh-CCC------cEEEe--ccHHH-HH-H--HHHHhcCCCCeEEEcCCCccchHHHHHHhcc----
Q psy12791 57 NNPTRRNLERCIASLE-EAK------HGLCY--SSGLG-AV-T--AVTHLLSAGDHIISGDDVYGGTYRYFAQVAP---- 119 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~-~~~------~~i~~--~~G~~-al-~--~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~---- 119 (393)
+..+..++|+++++++ |.+ +.|++ |+|.+ ++ . .+.+++.+||+|++++|+|.+ +...++
T Consensus 92 ~~~G~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~----~~~~~~~~~~ 167 (448)
T 3meb_A 92 PVAGFPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPN----HYGIYDKVFN 167 (448)
T ss_dssp CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTH----HHHHHHHHHC
T ss_pred CCcchHHHHHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHh----HHHHHHhhHH
Confidence 3467889999999987 764 56776 66655 56 4 345678899999999999985 555566
Q ss_pred cCCcEEEeeCC---C-----CHHHHHhhcC---CCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCc
Q psy12791 120 KIGLEVDFVDL---R-----KIENLIKYIK---PNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLT 185 (393)
Q Consensus 120 ~~g~~v~~~~~---~-----d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~ 185 (393)
..|++++.++. + |++++++.+. ++++++++++||||||.+++ +++|.++|+++ |+++|+||+|..
T Consensus 168 ~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~-~~~li~Deay~~ 246 (448)
T 3meb_A 168 KLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEK-KHIAFFDSAYQG 246 (448)
T ss_dssp TTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTT
T ss_pred hCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHC-CCEEEEeccccc
Confidence 88999988876 2 7888988886 35788888999999999998 55589999999 999999999997
Q ss_pred ccccC------CC-----CCcCcEEEEcccccccCCCCceEEEE--Ee--------cCh----HHHHHHHHHHHhcCCCC
Q psy12791 186 AYYQK------SL-----PWGVDIVLYSLTKYMNGHSDVVMGAT--VT--------NDD----SLQARLKFLQNSMGVVP 240 (393)
Q Consensus 186 ~~~~~------~~-----~~~~di~~~S~sK~~~G~~G~r~G~~--~~--------~~~----~~~~~~~~~~~~~~~~~ 240 (393)
+.... ++ .....+++.|+||.+ |++|+|+||+ ++ +++ .+.+.+..........+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 325 (448)
T 3meb_A 247 FATGSFEADAFAVRMFVDAGVEVLVAQSFSKNF-GLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMS 325 (448)
T ss_dssp TSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTS-CCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSC
T ss_pred ccCCCcccCchhHHHHhhcCCcEEEEecccccC-CCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCc
Confidence 55421 00 123458899999999 7999999998 77 545 55555555444444445
Q ss_pred CHHHHHHHHhccCC----------HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 241 SPFDCWLVTRGLKT----------LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 241 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
+...+..+...+.. +...++++.++++.+.+.|+++
T Consensus 326 ~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 326 AIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp CHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 55555555555443 3334555666777777878754
No 145
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.94 E-value=5.6e-26 Score=223.83 Aligned_cols=169 Identities=22% Similarity=0.312 Sum_probs=130.3
Q ss_pred CCCCc-hHHHHHHHHHHHh-------CC----CcEEEeccHHHH-H-HHHHH-----hcCCCCeEEEcCCCccchHHHHH
Q psy12791 55 RSNNP-TRRNLERCIASLE-------EA----KHGLCYSSGLGA-V-TAVTH-----LLSAGDHIISGDDVYGGTYRYFA 115 (393)
Q Consensus 55 ~~~~~-~~~~lr~~la~~~-------~~----~~~i~~~~G~~a-l-~~~~~-----~~~~gd~vl~~~~~y~~~~~~~~ 115 (393)
.|+++ +..++++++++.+ +. +++|++|+|+++ + .++.. ++++||.|++++|+|++ |.
T Consensus 133 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~----~~ 208 (546)
T 2zy4_A 133 NYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTP----YI 208 (546)
T ss_dssp SCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHH----HH
T ss_pred CCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCcc----HH
Confidence 44444 5667888877643 22 368999999886 6 44544 47899999999999985 44
Q ss_pred Hh--cccCCcEEEeeCCC-------CHHHHHhhcCCCCcEEEEecCCCCcccccC---HHHHHHHH--HhCCCcEEEEeC
Q psy12791 116 QV--APKIGLEVDFVDLR-------KIENLIKYIKPNTKMVWIENPTNPLMTVFD---VKAISAVV--KQHPDILLVLDN 181 (393)
Q Consensus 116 ~~--~~~~g~~v~~~~~~-------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~---~~~l~~l~--~~~~~~~livDe 181 (393)
.. ....|++++.++.+ |++++++.+.+++++|++++||||||.+++ +++|.++| +++ +++||+||
T Consensus 209 ~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~-~~~ii~De 287 (546)
T 2zy4_A 209 EIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRP-DLMILTDD 287 (546)
T ss_dssp HHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCT-TCEEEEEC
T ss_pred HHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccC-CcEEEEeC
Confidence 44 34457888888763 688998888778999999999999999998 55677888 678 99999999
Q ss_pred ccCcccccC-CC---CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHH
Q psy12791 182 TFLTAYYQK-SL---PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 182 a~~~~~~~~-~~---~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~ 229 (393)
+|+++.... ++ ..+++++++||||.+ |++|+|+||++++++++++.+
T Consensus 288 ~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~~l~~~l 338 (546)
T 2zy4_A 288 VYGTFADDFQSLFAICPENTLLVYSFSKYF-GATGWRLGVVAAHQQNVFDLA 338 (546)
T ss_dssp TTGGGSTTCCCHHHHCGGGEEEEEESTTTT-TCGGGCEEEEEEESSCHHHHH
T ss_pred cchhhcccCcCHHHhCCCCEEEEEeCcccc-CCCCcceEEEEECCHHHHHHH
Confidence 999865421 11 125789999999999 799999999999844466665
No 146
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.94 E-value=2.9e-26 Score=219.13 Aligned_cols=213 Identities=13% Similarity=0.104 Sum_probs=152.7
Q ss_pred CCchHHHHHHHHHHHh-CC------CcEEEe--ccHHH-HH-HHH--HHhcCCC-----CeEEEcCCCccchHHHHHHhc
Q psy12791 57 NNPTRRNLERCIASLE-EA------KHGLCY--SSGLG-AV-TAV--THLLSAG-----DHIISGDDVYGGTYRYFAQVA 118 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~-~~------~~~i~~--~~G~~-al-~~~--~~~~~~g-----d~vl~~~~~y~~~~~~~~~~~ 118 (393)
+..+..++|+++|+++ +. ++.|++ ++|.+ ++ .++ ..++.+| |+|+++.|+|++ +...+
T Consensus 72 ~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~----~~~~~ 147 (412)
T 1ajs_A 72 PILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWEN----HNGVF 147 (412)
T ss_dssp CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTH----HHHHH
T ss_pred CCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHH----HHHHH
Confidence 4567789999999998 53 356666 66655 46 442 3456899 999999999985 56667
Q ss_pred ccCCcE-EEeeCC---C----CHHHHHhhcCC---CCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccC
Q psy12791 119 PKIGLE-VDFVDL---R----KIENLIKYIKP---NTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFL 184 (393)
Q Consensus 119 ~~~g~~-v~~~~~---~----d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~ 184 (393)
+..|++ ++.++. + |++++++.+.+ +++++++++||||||.+++ +++|.++|+++ |+++|+||+|.
T Consensus 148 ~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~y~ 226 (412)
T 1ajs_A 148 TTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRR-FLFPFFDSAYQ 226 (412)
T ss_dssp HHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCT
T ss_pred HHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEcccc
Confidence 788999 988887 3 78888888753 6778889999999999987 56789999999 99999999998
Q ss_pred cccccC------CCC-----CcCcEEEEcccccccCCCCceEEEEEe---cChH----HHHHHHHHHHhcCCCCCHHHHH
Q psy12791 185 TAYYQK------SLP-----WGVDIVLYSLTKYMNGHSDVVMGATVT---NDDS----LQARLKFLQNSMGVVPSPFDCW 246 (393)
Q Consensus 185 ~~~~~~------~~~-----~~~di~~~S~sK~~~G~~G~r~G~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
.+.... ++. .+.++++.|+||.+ |++|+|+||+++ + ++ +.+.+...........++..+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (412)
T 1ajs_A 227 GFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNF-GLYNERVGNLTVVAKE-PDSILRVLSQMQKIVRVTWSNPPAQGAR 304 (412)
T ss_dssp TTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTS-CCGGGCEEEEEEECSS-HHHHHHHHHHHHHHHHTTTSSCCSHHHH
T ss_pred cccCCcccccchHHHHHhccCCcEEEEEeccccc-CCCCcceEEEEEecCC-HHHHHHHHHHHHHHHhcccCCCChHHHH
Confidence 764421 111 23459999999999 689999999999 5 66 4444444222222333444444
Q ss_pred HHHhccCC----------HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 247 LVTRGLKT----------LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 247 ~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
.+...++. +...++++.++...+.+.|+++
T Consensus 305 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (412)
T 1ajs_A 305 IVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEAL 344 (412)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44444433 2334555566777778888764
No 147
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.94 E-value=2.2e-25 Score=211.65 Aligned_cols=215 Identities=13% Similarity=0.107 Sum_probs=152.4
Q ss_pred ccccCCCCchHHHHHHHHHHHh-CC------Cc--EEEeccHHH-HH-HHHHHhcC--CCCeEEEcCCCccchHHHHHHh
Q psy12791 51 FEYSRSNNPTRRNLERCIASLE-EA------KH--GLCYSSGLG-AV-TAVTHLLS--AGDHIISGDDVYGGTYRYFAQV 117 (393)
Q Consensus 51 ~~y~~~~~~~~~~lr~~la~~~-~~------~~--~i~~~~G~~-al-~~~~~~~~--~gd~vl~~~~~y~~~~~~~~~~ 117 (393)
+.|. +..+..+||+++|+++ +. ++ .+++|+|++ ++ .++..+.. + |+|++++|+|+ .|...
T Consensus 66 ~~Y~--~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~----~~~~~ 138 (405)
T 3k7y_A 66 KPYL--LGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYI----NHVNM 138 (405)
T ss_dssp CCCC--TTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCH----HHHHH
T ss_pred CCCC--CCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCH----hHHHH
Confidence 4454 3468889999999986 31 13 457777766 47 66666666 8 99999999998 47788
Q ss_pred cccCCcEEEeeCC-C------CHHHHHhhcC--CCCcEEEEecC-CCCcccccC---HHHHHHHHHhCCCcEEEEeCccC
Q psy12791 118 APKIGLEVDFVDL-R------KIENLIKYIK--PNTKMVWIENP-TNPLMTVFD---VKAISAVVKQHPDILLVLDNTFL 184 (393)
Q Consensus 118 ~~~~g~~v~~~~~-~------d~~~l~~~l~--~~~~~v~l~~p-~nptG~~~~---~~~l~~l~~~~~~~~livDea~~ 184 (393)
++..|++++.+++ + |++++++.+. ++++++++++| |||||.+++ +++|.++|+++ ++++|+||+|.
T Consensus 139 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~-~~~vi~De~Y~ 217 (405)
T 3k7y_A 139 IESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHK-KHVIIFDIAYQ 217 (405)
T ss_dssp HHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHH-CCEEEEEESCT
T ss_pred HHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CeEEEEecCcc
Confidence 8999999999987 1 7889988885 35688888665 899999998 66778889999 99999999999
Q ss_pred cccccC------CC----C-CcCcEEEEcccccccCCCCceEEEEEe--cChHHHHHHHH----HHHhcCCCCCHHHHHH
Q psy12791 185 TAYYQK------SL----P-WGVDIVLYSLTKYMNGHSDVVMGATVT--NDDSLQARLKF----LQNSMGVVPSPFDCWL 247 (393)
Q Consensus 185 ~~~~~~------~~----~-~~~di~~~S~sK~~~G~~G~r~G~~~~--~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 247 (393)
++.+.. +. . ....++++||||.| |++|+|+||+++ .++++++.+.. .......+.+...+.+
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~ 296 (405)
T 3k7y_A 218 GFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNM-SLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRI 296 (405)
T ss_dssp TTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTS-CCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred cccCCCcccchHHHHHHHhcCCcEEEEeeCCccC-CCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHH
Confidence 866431 01 1 23569999999999 699999999864 45776665532 2222222334444433
Q ss_pred HHhccCC----------HHHHHHHHHHHHHHHHHHHh
Q psy12791 248 VTRGLKT----------LPCRLKEHERGSIEVAKFLE 274 (393)
Q Consensus 248 ~~~~~~~----------~~~~~~~~~~~~~~l~~~l~ 274 (393)
+...+.. +...++++.+++..+.+.|+
T Consensus 297 ~~~~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 297 LCQLLNNQNLKLNWIKELSQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332222 22334556677788888887
No 148
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.94 E-value=2.8e-25 Score=209.34 Aligned_cols=306 Identities=15% Similarity=0.182 Sum_probs=206.2
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh---cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL---LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~---~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~- 131 (393)
+.+...++|+++|+++|.++.+++++|++++ .++.++ +++||+|+++.++|++ +...++..|++++.++.+
T Consensus 30 ~~~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~----~~~~~~~~g~~~~~~~~~~ 105 (375)
T 2fnu_A 30 QGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVA----TANMLLESGYTPVFAGIKN 105 (375)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTH----HHHHHHHTTCEEEECCBCT
T ss_pred CChHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHh----HHHHHHHCCCEEEEeccCC
Confidence 3577899999999999988666667777778 777777 7899999999999996 444566789999999874
Q ss_pred ----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC--CCCcCcEEEEccc-
Q psy12791 132 ----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS--LPWGVDIVLYSLT- 204 (393)
Q Consensus 132 ----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~--~~~~~di~~~S~s- 204 (393)
|++++++.+++++++|++++| ||.+.|+++|.++|+++ |+++|+|++|+.+..... ...-.|+++.|+|
T Consensus 106 ~~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i~~l~~~~-~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~ 181 (375)
T 2fnu_A 106 DGNIDELALEKLINERTKAIVSVDY---AGKSVEVESVQKLCKKH-SLSFLSDSSHALGSEYQNKKVGGFALASVFSFHA 181 (375)
T ss_dssp TSSBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHHHHHHHH-TCEEEEECTTCTTCEETTEETTSSSSEEEEECCT
T ss_pred CCCCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHHHHHHHHc-CCEEEEECccccCCeECCeeccccCCeEEEeCCC
Confidence 788999999888999888877 99999999999999999 999999999987653222 2211378888888
Q ss_pred -ccccCCCCceEEEEEe-cChHHHHHHHHHHHhc--------------C--CCCCHHHHHHHHhccCCHHHHHHHHHHHH
Q psy12791 205 -KYMNGHSDVVMGATVT-NDDSLQARLKFLQNSM--------------G--VVPSPFDCWLVTRGLKTLPCRLKEHERGS 266 (393)
Q Consensus 205 -K~~~G~~G~r~G~~~~-~~~~~~~~~~~~~~~~--------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (393)
|++ |+ | +|++++ +++++.++++...... + ....+..+.+....++.+....++..+++
T Consensus 182 ~K~~-~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 257 (375)
T 2fnu_A 182 IKPI-TT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAA 257 (375)
T ss_dssp TSSS-CC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CCCc-cc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 56 7 667666 4577888776543211 1 13456666555555677777788888888
Q ss_pred HHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHH-HHHHHHHhcCccccccccCCccccccCcc
Q psy12791 267 IEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAE-ETRIFLESLLIFRCAESLGGIESLADLPA 345 (393)
Q Consensus 267 ~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~g~~~s~~~~~~ 345 (393)
+.+.+.|++++++. +..+. .. ....+.++++.++.... ....+.+.|...++.++.+. ......+.
T Consensus 258 ~~l~~~L~~~~~~~-~~~~~-~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~-~p~~~~~~ 324 (375)
T 2fnu_A 258 LTYDRIFKDNPYFT-PLHPL-LK----------DKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHY-KPIYQYQL 324 (375)
T ss_dssp HHHHHHHTTCSSEE-ESGGG-CS----------SCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCC-CCGGGSHH
T ss_pred HHHHHHhhcCCCcc-ccCCC-CC----------CCcceEEEEEEeCccccchHHHHHHHHHHCCCCccccc-cccccchh
Confidence 99999998876643 21110 00 01112456777742101 34455565554455544211 01000000
Q ss_pred cc---cCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 346 EM---THKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 346 ~~---~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.. .....+.... ...++|||+++..+++++++.+.++|+++.
T Consensus 325 ~~~~~~~~~~~~~~~----~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 369 (375)
T 2fnu_A 325 YQQLFNTAPLKSAED----FYHAEISLPCHANLNLESVQNIAHSVLKTF 369 (375)
T ss_dssp HHHHHCCCCCHHHHH----HHHHEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred hhcCCCccCChHHHH----HHhCEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 00 0000110000 113789999999999999999999988764
No 149
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.94 E-value=2e-25 Score=213.41 Aligned_cols=256 Identities=22% Similarity=0.236 Sum_probs=195.0
Q ss_pred CCCchHHHHHHHHHHHhCCCcEEE---eccHHHHH-HHHHHhcCCCCeEEEcC-CCccchHHHHH------HhcccCCcE
Q psy12791 56 SNNPTRRNLERCIASLEEAKHGLC---YSSGLGAV-TAVTHLLSAGDHIISGD-DVYGGTYRYFA------QVAPKIGLE 124 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~~~i~---~~~G~~al-~~~~~~~~~gd~vl~~~-~~y~~~~~~~~------~~~~~~g~~ 124 (393)
|+++..+++++.+++++|.+..++ +++|++++ .++.+++++||+|++++ +.|+++..... ..++..|++
T Consensus 62 y~~~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~ 141 (431)
T 3ht4_A 62 YDDIGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIG 141 (431)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCE
T ss_pred CChhhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCE
Confidence 456788999999999999986555 88999888 77788899999999998 99986432221 345668999
Q ss_pred EEeeCCC-----CHHHHHhhcCCCCcEEEEec-CCCCccccc---CHHHHHHHHHh--CCCcEEEEeCccCcccc-cCCC
Q psy12791 125 VDFVDLR-----KIENLIKYIKPNTKMVWIEN-PTNPLMTVF---DVKAISAVVKQ--HPDILLVLDNTFLTAYY-QKSL 192 (393)
Q Consensus 125 v~~~~~~-----d~~~l~~~l~~~~~~v~l~~-p~nptG~~~---~~~~l~~l~~~--~~~~~livDea~~~~~~-~~~~ 192 (393)
++.++.+ |++++++++++++++|++++ ||||+|... ++++|.++|++ + |+++++|++|+.+.. ..+.
T Consensus 142 ~~~v~~~~~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~-~~~livDea~~~~~~~~~~~ 220 (431)
T 3ht4_A 142 YNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKP-DVVVFVDNCYGEFIEEQEPC 220 (431)
T ss_dssp EEECCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCT-TCEEEEECTTCTTSSSCCGG
T ss_pred EEEeCCCCCCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCC-CCEEEEeCCChhhccCCCcc
Confidence 9999984 89999999999999999995 777777666 48899999999 9 999999999998764 4556
Q ss_pred CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc--CCC--CCHHHHHHHHhccCCHHHHHHHHHHHHHH
Q psy12791 193 PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM--GVV--PSPFDCWLVTRGLKTLPCRLKEHERGSIE 268 (393)
Q Consensus 193 ~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (393)
..++|++++|+||+++|..+..+||++++ +++++.++...... +.. .+...++.+.+.++.+..++++..+++..
T Consensus 221 ~~g~Di~~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~ 299 (431)
T 3ht4_A 221 HVGADLMAGSLIKNPGGGIVKTGGYIVGK-EQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIF 299 (431)
T ss_dssp GTTCSEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEcCccccCCCCCCCceEEEEec-HHHHHHHHHHhccCCcccccCccHHHHHHHHhHhhhHHHHHHHHHHHHHH
Confidence 67899999999999865334446999997 88988887654432 211 11222344556666677788899999999
Q ss_pred HHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcc
Q psy12791 269 VAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIF 328 (393)
Q Consensus 269 l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 328 (393)
+.++|++++. .+ +|. +.. ++.+-++.|.+ ++.+...+|++.++..
T Consensus 300 l~~~L~~~g~--~v-~p~-~~~----------~~~~li~~i~l-~~~~~~~~~~~~l~~~ 344 (431)
T 3ht4_A 300 TAAFLEKLGM--NT-SPA-WNA----------PRTDLIQSVQF-DDKDRMIAFCQAIQYA 344 (431)
T ss_dssp HHHHHHHHTC--CE-ESC-TTS----------CCSSSCCEEEC-CCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCcC--Ee-cCC-CCC----------CCccEEEEEEe-CCHHHHHHHHHHHHhc
Confidence 9999987654 23 343 211 12234788888 5788999999988764
No 150
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.94 E-value=2.6e-27 Score=225.12 Aligned_cols=314 Identities=13% Similarity=0.097 Sum_probs=200.6
Q ss_pred CCCC-CCCC--CCCc-cCCeeeeCCCCCCCCCccc-cCCCCchHHHHHHHHHHHhCCC-cEEEe-ccHHHHH-HHHHHhc
Q psy12791 23 QWRS-QCVI--PPII-LSTTFKQNTPGQPPQGFEY-SRSNNPTRRNLERCIASLEEAK-HGLCY-SSGLGAV-TAVTHLL 94 (393)
Q Consensus 23 ~~~~-~~~~--~p~~-~~~~~~~~~~~~~~~~~~y-~~~~~~~~~~lr~~la~~~~~~-~~i~~-~~G~~al-~~~~~~~ 94 (393)
.++| +++. +|++ +++.+.+++.+.+.....+ ..|+.+...++++.++++++.+ +.+++ ++|++++ .++..+.
T Consensus 46 ~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~ 125 (395)
T 1vef_A 46 EYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFAR 125 (395)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCccccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHH
Confidence 4557 4554 6776 5555555443321111111 1245788899999999999754 45555 5556667 5555442
Q ss_pred --CCCCeEEEcCCCccchHHHHHHhcccCCcE------------EEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccccc
Q psy12791 95 --SAGDHIISGDDVYGGTYRYFAQVAPKIGLE------------VDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 95 --~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~------------v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 160 (393)
.+||.|++++|+|++.+... +...|.+ +..++..|++++++.+++++++|++++++||||.++
T Consensus 126 ~~~~~~~vi~~~~~y~~~~~~~---~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~ 202 (395)
T 1vef_A 126 AHTGRKKFVAAMRGFSGRTMGS---LSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRP 202 (395)
T ss_dssp HHHSCCEEEEETTCCCCSSHHH---HHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEE
T ss_pred HHhCCCeEEEEcCCcCCCchhh---hhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCccCCCCccC
Confidence 57899999999997643222 2233432 566666799999999988899999888889999998
Q ss_pred C----HHHHHHHHHhCCCcEEEEeCccCcccc-cCCC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH
Q psy12791 161 D----VKAISAVVKQHPDILLVLDNTFLTAYY-QKSL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK 230 (393)
Q Consensus 161 ~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~ 230 (393)
| +++|.++|+++ |+++|+||+|+.+.. .... ....|++ |+||+++ . |+|+||++++ +++++.++
T Consensus 203 ~~~~~l~~i~~l~~~~-~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~-~-g~~~G~~~~~-~~~~~~l~ 276 (395)
T 1vef_A 203 ATPEFLRAAREITQEK-GALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALG-G-GVPLGVAVMR-EEVARSMP 276 (395)
T ss_dssp CCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGG-T-TSSCEEEEEE-HHHHHTSC
T ss_pred CCHHHHHHHHHHHHHc-CCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEccccc-C-CCceEEEEeh-HHHHhhhc
Confidence 8 99999999999 999999999995321 1111 1235665 8899994 4 8999999998 66776654
Q ss_pred HHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEE
Q psy12791 231 FLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLS 308 (393)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 308 (393)
..........++..+..+...++.+. ...++..++.+.+.+.|++.+. ..+. ...+.+.+++
T Consensus 277 ~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~---------------~~~~~g~~~~ 340 (395)
T 1vef_A 277 KGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPS-PKIR---------------EVRGMGLMVG 340 (395)
T ss_dssp TTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCC-TTEE---------------EEEEETTEEE
T ss_pred cCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhc-CceE---------------EEEEEEEEEE
Confidence 31111122345655555444444332 2345555666777777775432 0000 0011257889
Q ss_pred EEEcCCHHHHHHHHHhcC-ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 309 FYVNGGAEETRIFLESLL-IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 309 ~~~~~~~~~~~~~~~~l~-~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
+.++++ ...+.+.+. ..++.+..+ .++++|++++...++++++.+.++|
T Consensus 341 ~~~~~~---~~~l~~~l~~~~gi~v~~~---------------------------~~~~iRi~~~~~~~~~~i~~~~~~l 390 (395)
T 1vef_A 341 LELKEK---AAPYIARLEKEHRVLALQA---------------------------GPTVIRFLPPLVIEKEDLERVVEAV 390 (395)
T ss_dssp EEESSC---SHHHHHHHHHHHCEECEES---------------------------STTEEEECCCTTCCHHHHHHHHHHH
T ss_pred EEEcCh---HHHHHHHHHHHCCeEEecC---------------------------CCCEEEEeCCCCCCHHHHHHHHHHH
Confidence 998532 233444443 334443321 1579999999999999999998888
Q ss_pred HHhh
Q psy12791 388 RKAC 391 (393)
Q Consensus 388 ~~~~ 391 (393)
+++.
T Consensus 391 ~~~l 394 (395)
T 1vef_A 391 RAVL 394 (395)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8754
No 151
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.94 E-value=1.8e-26 Score=219.37 Aligned_cols=318 Identities=15% Similarity=0.103 Sum_probs=210.0
Q ss_pred CCCCC-CCC--CCCCcc-CCeeeeCCCCCCCC-CccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhc-
Q psy12791 22 DQWRS-QCV--IPPIIL-STTFKQNTPGQPPQ-GFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLL- 94 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~~-~~~~~~~~~~~~~~-~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~- 94 (393)
.+++| +++ .+|++. ++.+.+++.+.+.. .+.++.++++...++++.++++++.++.+++++|++++ .++..+.
T Consensus 36 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al~~~~~ 115 (395)
T 3nx3_A 36 KKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAMKTARK 115 (395)
T ss_dssp CEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCTTSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHH
Confidence 45678 776 678774 45555544332222 23345567889999999999999966677777777777 5554443
Q ss_pred ------CCCCeEEEcCCCccchHH---------HHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 95 ------SAGDHIISGDDVYGGTYR---------YFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 95 ------~~gd~vl~~~~~y~~~~~---------~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
.++|+|++.+|+|++... .+.......+.++..++.+|++++++++++++++|++++++|++|.+
T Consensus 116 ~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~~G~~ 195 (395)
T 3nx3_A 116 YAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNEKTCAIILESVQGEGGIN 195 (395)
T ss_dssp HHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHHTTCCTTEEEEEEESEECTTSCE
T ss_pred HhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHHHHHhccCCeEEEEEeCccCCCCcc
Confidence 457999999999976431 12222334456788888889999999999889999999999999999
Q ss_pred cC----HHHHHHHHHhCCCcEEEEeCccCcccc-cCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHH-HHH
Q psy12791 160 FD----VKAISAVVKQHPDILLVLDNTFLTAYY-QKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSL-QAR 228 (393)
Q Consensus 160 ~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~-~~~ 228 (393)
.+ +++|.++|+++ |+++|+||+|.++.. ... .....|++ |+||.++ . |+|+||++++ +++ .+.
T Consensus 196 ~~~~~~l~~l~~l~~~~-~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~-~-G~~~G~~~~~-~~~~~~~ 269 (395)
T 3nx3_A 196 PANKDFYKALRKLCDEK-DILLIADEIQCGMGRSGKFFAYEHAQILPDIM--TSAKALG-C-GLSVGAFVIN-QKVASNS 269 (395)
T ss_dssp ECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGT-T-TSCCEEEEEC-HHHHHHH
T ss_pred cCCHHHHHHHHHHHHHc-CCEEEEEecccCCCcCCcchhHHhcCCCCCEE--Eeccccc-C-CCceEEEEEc-hhhhhhh
Confidence 87 99999999999 999999999985421 111 11234544 6889994 4 8999999997 776 666
Q ss_pred HHHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHh----hCCCcceEeCCCCCCCcchHHHhhhcCC
Q psy12791 229 LKFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLE----SHPCVKGVLHPGLPSHPNHELAKSQWSG 302 (393)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~----~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 302 (393)
++..........++..+..+...++.+. ...++..++.+.+.+.|+ .++.+..+ ++
T Consensus 270 ~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------------~~ 331 (395)
T 3nx3_A 270 LEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKR------------------KG 331 (395)
T ss_dssp SCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------EE
T ss_pred cCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE------------------Ee
Confidence 6432222223445666555544443221 123334444444444443 33433221 12
Q ss_pred CcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHH
Q psy12791 303 TSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIAD 382 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~ 382 (393)
.+.++++.+.+ ......+.+.+...++.+..+ .++++|++++...++++++.
T Consensus 332 ~g~~~~~~~~~-~~~~~~~~~~l~~~Gi~v~~~---------------------------~~~~iRi~~~~~~t~e~i~~ 383 (395)
T 3nx3_A 332 LGFMQGLSLDK-SVKVAKVIQKCQENALLLISC---------------------------GENDLRFLPPLILQKEHIDE 383 (395)
T ss_dssp ETTEEEEEECT-TSCHHHHHHHHHHTTEECEEE---------------------------TTTEEEECCCTTCCHHHHHH
T ss_pred EEEEEEEEeCC-cchHHHHHHHHHHCCCEEecC---------------------------CCCEEEEECCCCCCHHHHHH
Confidence 35788999853 223455555554444444322 15799999999999999999
Q ss_pred HHHHHHHhh
Q psy12791 383 LDQALRKAC 391 (393)
Q Consensus 383 l~~al~~~~ 391 (393)
+.++|+++.
T Consensus 384 ~l~~l~~~l 392 (395)
T 3nx3_A 384 MSEKLRKAL 392 (395)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888888754
No 152
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.94 E-value=3e-26 Score=219.07 Aligned_cols=214 Identities=11% Similarity=0.072 Sum_probs=151.7
Q ss_pred CCchHHHHHHHHHHHhCC-------CcEEEe--ccHHH-HH-HH--HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc
Q psy12791 57 NNPTRRNLERCIASLEEA-------KHGLCY--SSGLG-AV-TA--VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL 123 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~-------~~~i~~--~~G~~-al-~~--~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~ 123 (393)
+..+..++|+++|++++. ++.|++ ++|.+ ++ .+ +...+.+||+|++++|+|++ +...++..|+
T Consensus 71 ~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~----~~~~~~~~g~ 146 (412)
T 1yaa_A 71 GITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWAN----HMAIFENQGL 146 (412)
T ss_dssp CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTT----HHHHHHTTTC
T ss_pred CCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCcc----HHHHHHHcCc
Confidence 346788999999998832 456776 76655 56 44 34556799999999999996 5666778899
Q ss_pred EEEeeCC-C------CHHHHHhhcCCC---CcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC
Q psy12791 124 EVDFVDL-R------KIENLIKYIKPN---TKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK 190 (393)
Q Consensus 124 ~v~~~~~-~------d~~~l~~~l~~~---~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~ 190 (393)
+++.++. + |++++++.+.++ +.++++++||||||.+++ +++|.++|+++ |+++|+||+|..+.+..
T Consensus 147 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~ 225 (412)
T 1yaa_A 147 KTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASK-NHIALFDTAYQGFATGD 225 (412)
T ss_dssp CEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHT-TCEEEEEESCTTTSSSC
T ss_pred eEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEecccccccCCc
Confidence 9998887 2 788998887643 345555999999999997 55788889999 99999999998654321
Q ss_pred ------CC-C----Cc---CcEEEEcccccccCCCCceEEEEE--e----cChH----HHHHHHHHHHhcCCCCCHHHHH
Q psy12791 191 ------SL-P----WG---VDIVLYSLTKYMNGHSDVVMGATV--T----NDDS----LQARLKFLQNSMGVVPSPFDCW 246 (393)
Q Consensus 191 ------~~-~----~~---~di~~~S~sK~~~G~~G~r~G~~~--~----~~~~----~~~~~~~~~~~~~~~~~~~~~~ 246 (393)
++ . .. .+++++|+||.+ |++|+|+||++ + ++++ +.+.+...........+...+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 304 (412)
T 1yaa_A 226 LDKDAYAVRLGVEKLSTVSPVFVCQSFAKNA-GMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAK 304 (412)
T ss_dssp HHHHTHHHHHHHHHTTTTCCEEEEEECTTTS-CCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHH
T ss_pred ccchhHHHHHHHhcCCCCcceEEEeccCCCC-CCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHH
Confidence 11 1 12 578999999999 68999999998 7 2366 6776665333333344555554
Q ss_pred HHHhccCC----------HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 247 LVTRGLKT----------LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 247 ~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
.+...++. +...++++.++.+.+.+.|+++
T Consensus 305 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (412)
T 1yaa_A 305 IVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKL 344 (412)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44444433 2334455556677777777654
No 153
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.94 E-value=1.2e-25 Score=214.32 Aligned_cols=321 Identities=12% Similarity=0.104 Sum_probs=208.7
Q ss_pred CCCCC-CCC--CCCCcc-CCeeeeCCCCCCCCC-ccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcC
Q psy12791 22 DQWRS-QCV--IPPIIL-STTFKQNTPGQPPQG-FEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLS 95 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~~-~~~~~~~~~~~~~~~-~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~ 95 (393)
..++| +++ .+|++. ++.+.+++.+.+... +.+..++++...++++.++++++.++.+++++|++++ .++..+..
T Consensus 39 ~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al~~~~~ 118 (406)
T 4adb_A 39 KEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKLARK 118 (406)
T ss_dssp CEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 34667 554 356655 344444433322221 2234466788999999999999988777777777787 66655543
Q ss_pred -------CC-CeEEEcCCCccchHHHHHHhc---------ccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccc
Q psy12791 96 -------AG-DHIISGDDVYGGTYRYFAQVA---------PKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMT 158 (393)
Q Consensus 96 -------~g-d~vl~~~~~y~~~~~~~~~~~---------~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~ 158 (393)
+| |+|++.+|+|++......... ...+..+..++..|++++++.+.+++++|+++ |+||||.
T Consensus 119 ~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~-p~np~g~ 197 (406)
T 4adb_A 119 FAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVE-PIQGEGG 197 (406)
T ss_dssp HHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCSTTEEEEEEC-SEETTTT
T ss_pred HHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhcCCeEEEEEe-CCcCCCC
Confidence 55 999999999987532222211 11224677788889999999999889999999 9999998
Q ss_pred cc-----CHHHHHHHHHhCCCcEEEEeCccCccccc-CCC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHH
Q psy12791 159 VF-----DVKAISAVVKQHPDILLVLDNTFLTAYYQ-KSL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQA 227 (393)
Q Consensus 159 ~~-----~~~~l~~l~~~~~~~~livDea~~~~~~~-~~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~ 227 (393)
++ ++++|.++|+++ |+++|+||+|+++... .+. ....|++ |+||++ | +|+|+||++++ +++++
T Consensus 198 ~~~~~~~~l~~l~~l~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~-~-~G~r~G~~~~~-~~~~~ 271 (406)
T 4adb_A 198 VVPASNAFLQGLRELCNRH-NALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKAL-G-GGFPVGALLAT-EECAR 271 (406)
T ss_dssp SEECCHHHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGG-G-TTSCCEEEEEC-HHHHH
T ss_pred CccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhh-c-CCCCeEEEEEc-HHHHh
Confidence 77 388999999999 9999999999854221 111 1235666 679999 5 79999999997 78877
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHhccCCH--HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcc
Q psy12791 228 RLKFLQNSMGVVPSPFDCWLVTRGLKTL--PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSG 305 (393)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~ 305 (393)
.+...........++..+..+...++.+ ....++..++.+.+.+.|+..... ++. ....++.+.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~----~~~----------~~~~~~~g~ 337 (406)
T 4adb_A 272 VMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHR----YGL----------FSEVRGLGL 337 (406)
T ss_dssp TCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHH----HCC----------EEEEEEETT
T ss_pred hhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh----CCC----------ceEEEEEEE
Confidence 6654333333345566655554443321 445566666677777777643110 000 001122357
Q ss_pred eEEEEEcCCH-HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHH
Q psy12791 306 MLSFYVNGGA-EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLD 384 (393)
Q Consensus 306 ~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~ 384 (393)
++++.+.+.. .....+.+.+...++.+..++ ++++|++++...++++++.+.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~---------------------------~~~iRi~~~~~~~~e~i~~~~ 390 (406)
T 4adb_A 338 LIGCVLNADYAGQAKQISQEAAKAGVMVLIAG---------------------------GNVVRFAPALNVSEEEVTTGL 390 (406)
T ss_dssp EEEEEECTTTTTCHHHHHHHHHHTTEECEESS---------------------------TTEEEECCCTTCCHHHHHHHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHHHCCcEEeecC---------------------------CCeEEEECCCCCCHHHHHHHH
Confidence 8899985311 134455555544454443321 579999999998888888887
Q ss_pred HHHHHh
Q psy12791 385 QALRKA 390 (393)
Q Consensus 385 ~al~~~ 390 (393)
++|+++
T Consensus 391 ~~l~~~ 396 (406)
T 4adb_A 391 DRFAAA 396 (406)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777654
No 154
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.94 E-value=4.5e-26 Score=217.25 Aligned_cols=324 Identities=13% Similarity=0.064 Sum_probs=203.2
Q ss_pred CCCC-CCCCCCCccCCeeeeCCCCCCCC--CccccC--C--CCchHHHH----HHHHHHHhCCCc-EEEeccHHHHH-HH
Q psy12791 23 QWRS-QCVIPPIILSTTFKQNTPGQPPQ--GFEYSR--S--NNPTRRNL----ERCIASLEEAKH-GLCYSSGLGAV-TA 89 (393)
Q Consensus 23 ~~~~-~~~~~p~~~~~~~~~~~~~~~~~--~~~y~~--~--~~~~~~~l----r~~la~~~~~~~-~i~~~~G~~al-~~ 89 (393)
+++| +++++|+ ++.+.+++.+.+.. .+.|.. + +.+....+ |+.+++++|.+. .+++++|++++ .+
T Consensus 24 ~~i~~~~~~~~~--~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~~~~i~~~sGt~a~~~~ 101 (407)
T 2dkj_A 24 EGLELIASENFV--SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAAWANVQPHSGSQANMAV 101 (407)
T ss_dssp TSEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHH
T ss_pred cceeeccCCCCC--CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCCcceEEecchHHHHHHH
Confidence 5567 7888887 55666665554321 223321 1 22322233 348999999884 57789999887 77
Q ss_pred HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCC------CCHHHHHhhcCC-CCcEEEEecCCCCccccc
Q psy12791 90 VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDL------RKIENLIKYIKP-NTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 90 ~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~------~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~ 160 (393)
+..++++||+|++++|+|++.... ...++..|. ..+.++. .|++++++.+.+ ++++|++++|+|| ...
T Consensus 102 ~~~~~~~gd~Vl~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~ 178 (407)
T 2dkj_A 102 YMALMEPGDTLMGMDLAAGGHLTH-GSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYP--RFW 178 (407)
T ss_dssp HHHHCCTTCEEEEECGGGTCCGGG-TCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSSCC--SCC
T ss_pred HHHhcCCCCEEEEecccccCccch-HHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccccC--CCC
Confidence 777789999999999999863210 233444455 4555532 278999998874 7999999999998 678
Q ss_pred CHHHHHHHHHhCCCcEEEEeCccCcccc-cC----CCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh
Q psy12791 161 DVKAISAVVKQHPDILLVLDNTFLTAYY-QK----SLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS 235 (393)
Q Consensus 161 ~~~~l~~l~~~~~~~~livDea~~~~~~-~~----~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~ 235 (393)
|+++|.++|+++ |+++|+||+|+.+.. .. +.. ..|++++|+||+++ |.|+||++++++++.+.++.....
T Consensus 179 ~l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~---g~~~G~~~~~~~~~~~~l~~~~~~ 253 (407)
T 2dkj_A 179 DFKAFREIADEV-GAYLVVDMAHFAGLVAAGLHPNPLP-YAHVVTSTTHKTLR---GPRGGLILSNDPELGKRIDKLIFP 253 (407)
T ss_dssp CHHHHHHHHHHH-TCEEEEECTTTHHHHHTTCSCCCTT-TCSEEEEESSGGGC---CCSCEEEEESCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHc-CCEEEEEccccccccccCccCCccc-cccEEEEeccccCC---CCCceEEEECCHHHHHHHHhhhcc
Confidence 999999999999 999999999997332 11 111 37999999999773 457899999757888888765533
Q ss_pred cC-CCCCHHHHHHHHhcc-----CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEE
Q psy12791 236 MG-VVPSPFDCWLVTRGL-----KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSF 309 (393)
Q Consensus 236 ~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~ 309 (393)
+. ...++.....+...+ +.+...+++..++.+.+.+.|++. ++. +..+ ...+.++++
T Consensus 254 ~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~---------------~~~~~~~~~ 316 (407)
T 2dkj_A 254 GIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYR-IVTG---------------GTDNHLFLV 316 (407)
T ss_dssp TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCE-EGGG---------------SCSSSEEEE
T ss_pred cccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-Cce-eecC---------------CCCceEEEE
Confidence 32 233443322222222 234556667777888888888865 332 2111 113578888
Q ss_pred EEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC----ChHHHHHHHHH
Q psy12791 310 YVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE----GYTDLIADLDQ 385 (393)
Q Consensus 310 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~----~~~~~i~~l~~ 385 (393)
.++........+.+.+...++.+..|..+.....+ ..++++|+|++.. .++++++.+.+
T Consensus 317 ~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~-----------------~~~~~iRis~~~~~~~~~~~~~i~~~~~ 379 (407)
T 2dkj_A 317 DLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPP-----------------RVTSGIRIGTPAITTRGFTPEEMPLVAE 379 (407)
T ss_dssp ECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCT-----------------TTCSEEEEECHHHHHTTCCGGGHHHHHH
T ss_pred ECcccCCCHHHHHHHHHHcCceecCCcCccccccc-----------------cCCCceeeecccccccCCCHHHHHHHHH
Confidence 88521012334444454445555554321000000 1257899999753 45555666666
Q ss_pred HHHHh
Q psy12791 386 ALRKA 390 (393)
Q Consensus 386 al~~~ 390 (393)
+|+++
T Consensus 380 ~l~~~ 384 (407)
T 2dkj_A 380 LIDRA 384 (407)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 155
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.94 E-value=1e-26 Score=220.82 Aligned_cols=212 Identities=14% Similarity=0.113 Sum_probs=146.7
Q ss_pred CchHHHHHHHHHHHh-CC---CcEEEe--ccHHH-HH-HHHHHh--cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 58 NPTRRNLERCIASLE-EA---KHGLCY--SSGLG-AV-TAVTHL--LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 58 ~~~~~~lr~~la~~~-~~---~~~i~~--~~G~~-al-~~~~~~--~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
..+..++|+++|+++ +. ++.|++ ++|.+ ++ .++..+ +.+||+|+++.|+|++ +...++..|.+++.
T Consensus 68 ~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~----~~~~~~~~g~~~~~ 143 (394)
T 2ay1_A 68 LSGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPN----HVSIMNFMGLPVQT 143 (394)
T ss_dssp SSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHH----HHHHHHHHTCCEEE
T ss_pred CCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHcCCceEE
Confidence 356789999999997 54 366665 66655 57 554444 3489999999999985 55667778999998
Q ss_pred eCC---C----CHHHHHhhcCC---CCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCccccc-----
Q psy12791 128 VDL---R----KIENLIKYIKP---NTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQ----- 189 (393)
Q Consensus 128 ~~~---~----d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~----- 189 (393)
++. + |++++++.+.+ +++++++++||||||.+++ +++|.++|+++ |+++|+||+|+.+...
T Consensus 144 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~ 222 (394)
T 2ay1_A 144 YRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKT-GALPLIDLAYQGFGDGLEEDA 222 (394)
T ss_dssp EECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEECCTTSSSCHHHHH
T ss_pred EecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEecCccccccCcccch
Confidence 887 3 78999888864 3677778999999999998 55788999999 9999999999975431
Q ss_pred CCCC-----CcCcEEEEcccccccCCCCceEEEEEe--cChHHHHHHH----HHHHhcCCCCCHHHHHHHHhccCC----
Q psy12791 190 KSLP-----WGVDIVLYSLTKYMNGHSDVVMGATVT--NDDSLQARLK----FLQNSMGVVPSPFDCWLVTRGLKT---- 254 (393)
Q Consensus 190 ~~~~-----~~~di~~~S~sK~~~G~~G~r~G~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---- 254 (393)
.++. ...+++++|+||++ |++|+|+||+++ +++++.+.+. ..........++..+..+...++.
T Consensus 223 ~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~ 301 (394)
T 2ay1_A 223 AGTRLIASRIPEVLIAASCSKNF-GIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELR 301 (394)
T ss_dssp HHHHHHHHHCSSEEEEEECTTTT-TCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHH
T ss_pred HHHHHHhhcCCCEEEEEeccCCC-cCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHH
Confidence 0111 13458899999999 699999999998 3366544432 222222222244444444443332
Q ss_pred ------HHHHHHHHHHHHHHHHHHHhh
Q psy12791 255 ------LPCRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 255 ------~~~~~~~~~~~~~~l~~~l~~ 275 (393)
+....+++.++++.+.+.|++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~ 328 (394)
T 2ay1_A 302 ADWMAELEAVRSGMLRLREQLAGELRD 328 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 233344555566666676664
No 156
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.93 E-value=6e-25 Score=208.79 Aligned_cols=214 Identities=15% Similarity=0.100 Sum_probs=152.2
Q ss_pred CCchHHHHHHHHHHHh---CC----CcEEEe--ccHHH-HH-HHHHHh--cCCCCeEEEcCCCccchHHHHHHhcccCCc
Q psy12791 57 NNPTRRNLERCIASLE---EA----KHGLCY--SSGLG-AV-TAVTHL--LSAGDHIISGDDVYGGTYRYFAQVAPKIGL 123 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~---~~----~~~i~~--~~G~~-al-~~~~~~--~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~ 123 (393)
+.++..++|+++|+++ +. ++.|++ ++|++ ++ .++..+ +.+||+|+++.|+|++ +...++..|.
T Consensus 67 ~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~----~~~~~~~~g~ 142 (396)
T 2q7w_A 67 GIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPN----HKSVFNSAGL 142 (396)
T ss_dssp CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTH----HHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchh----HHHHHHHcCC
Confidence 4567889999999987 21 356665 66655 56 444333 4699999999999995 6667788899
Q ss_pred EEEeeCC---C----CHHHHHhhcCC---CCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCccccc-
Q psy12791 124 EVDFVDL---R----KIENLIKYIKP---NTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQ- 189 (393)
Q Consensus 124 ~v~~~~~---~----d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~- 189 (393)
+++.++. + |++++++.+.+ +++++++++||||||.+++ +++|.++|+++ |+++|+||+|..+...
T Consensus 143 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~-~~~li~De~~~~~~~~~ 221 (396)
T 2q7w_A 143 EVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEK-GWLPLFDFAYQGFARGL 221 (396)
T ss_dssp EEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTSSSCH
T ss_pred ceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEecccccccCCc
Confidence 9999987 3 78999998864 3678888999999999997 55788999999 9999999999875432
Q ss_pred --C--CCC-----CcCcEEEEcccccccCCCCceEEEEEe--cChH----HHHHHHHHHHhcCCCCCHHHHHHHHhccCC
Q psy12791 190 --K--SLP-----WGVDIVLYSLTKYMNGHSDVVMGATVT--NDDS----LQARLKFLQNSMGVVPSPFDCWLVTRGLKT 254 (393)
Q Consensus 190 --~--~~~-----~~~di~~~S~sK~~~G~~G~r~G~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (393)
. ++. ...+++++|+||.+ |++|+|+||+++ ++++ +.+.+...........++..+..+...++.
T Consensus 222 ~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 300 (396)
T 2q7w_A 222 EEDAEGLRAFAAMHKELIVASSYSXNF-GLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSN 300 (396)
T ss_dssp HHHTHHHHHHHHHCSCEEEEEECTTTT-TCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTS
T ss_pred cchhHHHHHHHhcCCcEEEEEeccccc-cccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcC
Confidence 1 111 13569999999999 799999999997 3353 444444322222333456666555555544
Q ss_pred H----------HHHHHHHHHHHHHHHHHHhhC
Q psy12791 255 L----------PCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 255 ~----------~~~~~~~~~~~~~l~~~l~~~ 276 (393)
. ....+++.++++.+.+.|++.
T Consensus 301 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (396)
T 2q7w_A 301 DALRAIWEQELTDMRQRIQRMRQLFVNTLQEK 332 (396)
T ss_dssp HHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 223344456667777777764
No 157
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.93 E-value=1.6e-24 Score=208.60 Aligned_cols=313 Identities=14% Similarity=0.055 Sum_probs=205.1
Q ss_pred CCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh---------cCCCCeEEEcCCCccchHHHHHHhcccCCcEE
Q psy12791 56 SNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL---------LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEV 125 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~---------~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v 125 (393)
++.+...++|+++|+++|.++.+++++|++++ .++.++ +++||+|+++.++|++ +...++..|+++
T Consensus 59 ~~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~----~~~~~~~~g~~~ 134 (437)
T 3bb8_A 59 TTGRFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPT----TVNPTIQNGLIP 134 (437)
T ss_dssp BSCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHH----HHHHHHHTTCEE
T ss_pred CCChHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHH----HHHHHHHcCCEE
Confidence 35688999999999999999999999999887 666666 7899999999999986 445566789999
Q ss_pred EeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCc--Cc
Q psy12791 126 DFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWG--VD 197 (393)
Q Consensus 126 ~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~--~d 197 (393)
+.++.+ |++++++.+.+++++|++++ ++|...++++|.++|+++ |+++|+|++|+.+........+ .|
T Consensus 135 ~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~~~~-~~~li~D~a~~~g~~~~~~~~~~~~d 210 (437)
T 3bb8_A 135 VFVDVDIPTYNVNASLIEAAVSDKTKAIMIAH---TLGNLFDLAEVRRVADKY-NLWLIEDCCDALGSTYDGKMAGTFGD 210 (437)
T ss_dssp EECCEETTTTEECGGGHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHHHHH-TCEEEEECTTCTTCEETTEETTSSSS
T ss_pred EEEeccCccCCcCHHHHHHhcCCCCeEEEEeC---CCCChhcHHHHHHHHHHc-CCEEEEECccccCceECCeecccccC
Confidence 998764 78999999988899999975 346668999999999999 9999999999965432211123 68
Q ss_pred EEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc-------------------------------------CC--
Q psy12791 198 IVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM-------------------------------------GV-- 238 (393)
Q Consensus 198 i~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~-------------------------------------~~-- 238 (393)
+++.||+|.+ +++|.++|+++++++.+.+.++...... +.
T Consensus 211 ~~~~s~~~~k-~l~~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 289 (437)
T 3bb8_A 211 IGTVSFYPAK-HITMGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNL 289 (437)
T ss_dssp EEEEECSTTS-SSCCSSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBC
T ss_pred EEEEECcCCc-CCCCCCeEEEEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCccc
Confidence 9999999888 5788899999998555555444322110 00
Q ss_pred CCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-HHH
Q psy12791 239 VPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-AEE 317 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 317 (393)
..++..+.++...++.+....++..++.+.+.+.|+.++++. .++...... ..++ ..+.+.+... ...
T Consensus 290 ~~~~~~aa~~l~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~--~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~ 358 (437)
T 3bb8_A 290 KITDMQAACGLAQLERIEEFVEKRKANFKYLKDALQSCADFI--ELPEATENS--------DPSW-FGFPITLKEDSGVS 358 (437)
T ss_dssp CCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTTTE--ECCCCCTTE--------ECCC-SSEEEEECGGGSSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcc--ccCCCCCCC--------ceee-EEEEEEECCcCcCc
Confidence 123455555555555555566666677777888887765542 223211000 0011 1233333200 012
Q ss_pred HHHHHHhcCccccccccCCccccccCccccc-----CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 318 TRIFLESLLIFRCAESLGGIESLADLPAEMT-----HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 318 ~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~-----~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
.+.+.+.|...++.++.+........|.... ...++..... ..+.|||+++...++++++.+.++|+++.+
T Consensus 359 ~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 359 RIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRI----MNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHH----HHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHH----hcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 3345555544466555543311111111000 1112222211 146799999999999999999999987653
No 158
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.93 E-value=1.4e-26 Score=217.50 Aligned_cols=276 Identities=13% Similarity=0.054 Sum_probs=182.7
Q ss_pred hHHHHHHHHHHHhCCCc--E-EEeccHHH-HH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 60 TRRNLERCIASLEEAKH--G-LCYSSGLG-AV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~~--~-i~~~~G~~-al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
..+++++.+++++|.++ . +++|+|++ ++ .++.+++++||+|+++++.+.+.+ +...++..| +++.++.+
T Consensus 50 ~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g-~~~~v~~~~~~ 126 (362)
T 2c0r_A 50 VHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASK--ALKEAKLIG-DTHVAASSEAS 126 (362)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHHS-CEEEEEECGGG
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHH--HHHHHHHhC-CeEEEeccccc
Confidence 46789999999999873 4 57766655 47 777788899999998876644321 234556678 88777643
Q ss_pred ------CHHHHHhhcCCCCcEEEEecCCCCcccc-cCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEccc
Q psy12791 132 ------KIENLIKYIKPNTKMVWIENPTNPLMTV-FDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLT 204 (393)
Q Consensus 132 ------d~~~l~~~l~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~s 204 (393)
|.+++ .++++|++|++++|+||||.+ .|+++| + |+++++|++|+.+....++. ..|+++.|+|
T Consensus 127 ~~~~~~~~~~~--~i~~~t~~v~~~~~~n~tG~~~~~l~~i------~-~~~vivD~a~~~~~~~~~~~-~~d~~~~s~~ 196 (362)
T 2c0r_A 127 NYMTLPKLQEI--QLQDNAAYLHLTSNETIEGAQFKAFPDT------G-SVPLIGDMSSDILSRPFDLN-QFGLVYAGAQ 196 (362)
T ss_dssp TTCSCCCGGGC--CCCTTEEEEEEESEETTTTEECSSCCCC------T-TSCEEEECTTTTTSSCCCGG-GCSEEEEETT
T ss_pred ccccCCCHHHc--ccCCCcCEEEEeCCcCccceeccccccc------C-CCEEEEEChhhccCCccchh-HCcEEEEecc
Confidence 23332 267789999999999999996 567766 7 99999999999765422222 2489999999
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHH------------HHhcCCCCCHHHHHHHHhccC------CHHHHHHHHHHHH
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKFL------------QNSMGVVPSPFDCWLVTRGLK------TLPCRLKEHERGS 266 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 266 (393)
|++ |++| +||++++ +++++.++.. ......+.+...+..+...++ .+..++++..+++
T Consensus 197 K~~-g~~G--~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 272 (362)
T 2c0r_A 197 KNL-GPSG--VTVVIVR-EDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKA 272 (362)
T ss_dssp TTT-CCSS--CEEEEEE-GGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred ccc-cCcC--cEEEEEc-HHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999 6999 9999997 6665544321 001222344444333333332 2455666777778
Q ss_pred HHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCccc
Q psy12791 267 IEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAE 346 (393)
Q Consensus 267 ~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~ 346 (393)
+.+.+.|++++.+..+..+. . ...+.+++|.++ +......+.+.|...++.+..|..
T Consensus 273 ~~l~~~L~~~~~~~~~~~~~-----~--------~~~~~~~~~~~~-~~~~~~~~~~~L~~~gi~~~~g~~--------- 329 (362)
T 2c0r_A 273 SLIYDAIDQSGGFYRGCVDV-----D--------SRSDMNITFRLA-SEELEKEFVKASEQEGFVGLKGHR--------- 329 (362)
T ss_dssp HHHHHHHHTSTTSSEESSCG-----G--------GBCSSEEEEECS-CHHHHHHHHHHHHHTTEESCBCCT---------
T ss_pred HHHHHHHHHcCCccccCCCh-----H--------HcCCcEEEEEcC-CcchHHHHHHHHHHCCCeeccCCC---------
Confidence 88888888765321121110 0 011356888884 344566677777655554433211
Q ss_pred ccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 347 MTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 347 ~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+.||+|++..+++++++.+.++|+++.
T Consensus 330 ----------------~~~~iRis~~~~~~~e~i~~l~~~l~~~~ 358 (362)
T 2c0r_A 330 ----------------SVGGLRASIYNAVPYESCEALVQFMEHFK 358 (362)
T ss_dssp ----------------TTCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred ----------------CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 02579999999999999999999998764
No 159
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.93 E-value=3.9e-25 Score=211.42 Aligned_cols=283 Identities=13% Similarity=0.106 Sum_probs=189.2
Q ss_pred chHHHHHHHHHHHhCCC-cEEEeccHHH-HH-HHHHHhc------CCCCe-EEEcCCCccchHHHHHHhcccC--CcEEE
Q psy12791 59 PTRRNLERCIASLEEAK-HGLCYSSGLG-AV-TAVTHLL------SAGDH-IISGDDVYGGTYRYFAQVAPKI--GLEVD 126 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~-~~i~~~~G~~-al-~~~~~~~------~~gd~-vl~~~~~y~~~~~~~~~~~~~~--g~~v~ 126 (393)
+...++++.+++++|.+ +.+++++|++ ++ .++..++ ++||+ |+++.++|+++...+...++.. |++++
T Consensus 71 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~ 150 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLR 150 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEE
Confidence 56789999999999986 5666666655 47 5666555 88987 4555667776544443334444 99999
Q ss_pred eeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcEEEEcccc
Q psy12791 127 FVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDIVLYSLTK 205 (393)
Q Consensus 127 ~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di~~~S~sK 205 (393)
.++. ++++++.+.+++++|++++|+||||.++|+++|.++|+++ |+++|+|++|+.+...... ..+.|+++.|+||
T Consensus 151 ~v~~--~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~-~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K 227 (416)
T 1qz9_A 151 LVDS--PEELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHEC-GALAIWDLAHSAGAVPVDLHQAGADYAIGCTYK 227 (416)
T ss_dssp EESS--GGGHHHHCSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHH-TCEEEEECTTTTTTSCCCHHHHTCSEEEECSSS
T ss_pred EeCc--HHHHHHHhCCCceEEEEeccccCcccccCHHHHHHHHHHc-CCEEEEEccccccCcCCChhhcCCCEEEecCcc
Confidence 9987 7888888888899999999999999999999999999999 9999999999864332111 1368999999999
Q ss_pred cccCCCCceE-EEEEecChHHHHHHHHHH-----------------------HhcCCCCCHHHHHH---HHhcc--CCHH
Q psy12791 206 YMNGHSDVVM-GATVTNDDSLQARLKFLQ-----------------------NSMGVVPSPFDCWL---VTRGL--KTLP 256 (393)
Q Consensus 206 ~~~G~~G~r~-G~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~---~~~~~--~~~~ 256 (393)
+++|.+| + |+++++ +++.+.++... ....+..+...... ++..+ +.+.
T Consensus 228 ~l~~g~~--~~g~l~~~-~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 304 (416)
T 1qz9_A 228 YLNGGPG--SQAFVWVS-PQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMA 304 (416)
T ss_dssp TTCCCTT--CCCEEEEC-TTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHH
T ss_pred cCCCCCC--CeEEEEEC-HHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHH
Confidence 9854444 5 999997 66655443210 01112233333222 22222 3456
Q ss_pred HHHHHHHHHHHHHHHHHhhC-C--CcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccc
Q psy12791 257 CRLKEHERGSIEVAKFLESH-P--CVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAES 333 (393)
Q Consensus 257 ~~~~~~~~~~~~l~~~l~~~-~--~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 333 (393)
...++..++.+.+.+.|++. + ++. +..+. .. ...+++++|.++ + ...+.+.|...++.+.
T Consensus 305 ~~~~~~~~~~~~l~~~L~~~~~~~g~~-~~~~~---~~---------~~~~~~~~~~~~-~---~~~l~~~l~~~gi~~~ 367 (416)
T 1qz9_A 305 SLRRKSLALTDLFIELVEQRCAAHELT-LVTPR---EH---------AKRGSHVSFEHP-E---GYAVIQALIDRGVIGD 367 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCE-ECSCS---SG---------GGBCSEEEEECT-T---HHHHHHHHHTTTEECE
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeE-EeCCC---CH---------HHcCCEEEEecC-C---HHHHHHHHHhCCcEec
Confidence 66777778888888888764 4 432 22121 00 012467888884 3 3344444443333321
Q ss_pred cCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEec-CCChHHHHHHHHHHHHHhh
Q psy12791 334 LGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVG-VEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 334 ~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~-~~~~~~~i~~l~~al~~~~ 391 (393)
. ..++++|+|++ +.+++++++.+.++|+++.
T Consensus 368 ~---------------------------~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~ 399 (416)
T 1qz9_A 368 Y---------------------------REPRIMRFGFTPLYTTFTEVWDAVQILGEIL 399 (416)
T ss_dssp E---------------------------ETTTEEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred c---------------------------CCCCeEEEeCcccCCCHHHHHHHHHHHHHHH
Confidence 0 01579999998 5888888888888887653
No 160
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.93 E-value=2.7e-26 Score=219.86 Aligned_cols=317 Identities=14% Similarity=0.101 Sum_probs=200.0
Q ss_pred CCCC-CCCC--CCCcc-CCeeeeCCCCCCCCCccc-cCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcC-
Q psy12791 23 QWRS-QCVI--PPIIL-STTFKQNTPGQPPQGFEY-SRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLS- 95 (393)
Q Consensus 23 ~~~~-~~~~--~p~~~-~~~~~~~~~~~~~~~~~y-~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~- 95 (393)
.++| +++. +|++. ++.+.+++.+.+.....+ ..|+.+...++++.|++++|.++.+++++|++++ .++..+..
T Consensus 58 ~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~al~~~~~~ 137 (420)
T 2pb2_A 58 EYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLARHY 137 (420)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHHHHHHHHHH
Confidence 4567 4442 66654 444554443322211111 1245678899999999999876667777777787 66655543
Q ss_pred ------CC-CeEEEcCCCccchHHHHHHhcc---------cCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCccc-
Q psy12791 96 ------AG-DHIISGDDVYGGTYRYFAQVAP---------KIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMT- 158 (393)
Q Consensus 96 ------~g-d~vl~~~~~y~~~~~~~~~~~~---------~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~- 158 (393)
+| ++|++.+|+|++.......... .....+..++..|++++++.+.+++++|++++++|++|.
T Consensus 138 ~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~le~~i~~~~~~vi~~p~~~~gG~~ 217 (420)
T 2pb2_A 138 ACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVQ 217 (420)
T ss_dssp HHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSE
T ss_pred hhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCHHHHHHHhccCceEEEEeCCcCCCCee
Confidence 67 4899999999764322221111 011136777778999999999888999999999998885
Q ss_pred cc---CHHHHHHHHHhCCCcEEEEeCccCccccc-CCC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHH
Q psy12791 159 VF---DVKAISAVVKQHPDILLVLDNTFLTAYYQ-KSL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 159 ~~---~~~~l~~l~~~~~~~~livDea~~~~~~~-~~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~ 229 (393)
++ ++++|.++|+++ |++||+||+|..+... ... ....|++ |+||++ | +|+|+||++++ +++++.+
T Consensus 218 ~~~~~~l~~l~~l~~~~-gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii--t~sK~l-~-~G~~iG~~~~~-~~l~~~l 291 (420)
T 2pb2_A 218 AATPEFLKGLRDLCDEH-QALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL--TSAKAL-G-GGFPVSAMLTT-QEIASAF 291 (420)
T ss_dssp ECCHHHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGG-G-TTSCCEEEEEC-HHHHTTC
T ss_pred cCCHHHHHHHHHHHHHc-CCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE--Eecccc-c-CCCceEEEEEh-HHHHHhh
Confidence 34 388999999999 9999999999753221 111 1245766 689999 5 68999999998 6777766
Q ss_pred HHHHHhcCCCCCHHHHHHHHhccCCH--HHHHHHHHHHHHHHHHHHhhC----CCcceEeCCCCCCCcchHHHhhhcCCC
Q psy12791 230 KFLQNSMGVVPSPFDCWLVTRGLKTL--PCRLKEHERGSIEVAKFLESH----PCVKGVLHPGLPSHPNHELAKSQWSGT 303 (393)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~----~~~~~v~~~~l~~~~~~~~~~~~~~~~ 303 (393)
+..........++..+..+...++.+ ....++..++.+.+.+.|++. +.+..+ ++.
T Consensus 292 ~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~~~ 353 (420)
T 2pb2_A 292 HVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDI------------------RGM 353 (420)
T ss_dssp C----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE------------------EEE
T ss_pred cCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE------------------Eec
Confidence 43222222234566655544433221 345566666667777777543 222111 223
Q ss_pred cceEEEEEcCCH-HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHH
Q psy12791 304 SGMLSFYVNGGA-EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIAD 382 (393)
Q Consensus 304 ~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~ 382 (393)
|.+++|.+.... .....+.+.+...++.+..+ .++++||+++...++++++.
T Consensus 354 g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~---------------------------~~~~iRl~~~~~~t~eei~~ 406 (420)
T 2pb2_A 354 GLLIGAELKPKYKGRARDFLYAGAEAGVMVLNA---------------------------GADVMRFAPSLVVEEADIHE 406 (420)
T ss_dssp TTEEEEEECGGGTTCHHHHHHHHHHTTEECEES---------------------------STTEEEECCCTTCCHHHHHH
T ss_pred ceEEEEEECCCchHHHHHHHHHHHHCCCEEEeC---------------------------CCCEEEEECCCCCCHHHHHH
Confidence 678888884210 02445555554444444322 14789999988888888888
Q ss_pred HHHHHHHh
Q psy12791 383 LDQALRKA 390 (393)
Q Consensus 383 l~~al~~~ 390 (393)
+.++|+++
T Consensus 407 ~~~~l~~~ 414 (420)
T 2pb2_A 407 GMQRFAQA 414 (420)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87777654
No 161
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.93 E-value=1.5e-26 Score=216.89 Aligned_cols=275 Identities=13% Similarity=0.091 Sum_probs=185.1
Q ss_pred hHHHHHHHHHHHhCCC--cEEEeccHH-H-HH-HHHHHhcCC---CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 60 TRRNLERCIASLEEAK--HGLCYSSGL-G-AV-TAVTHLLSA---GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~--~~i~~~~G~-~-al-~~~~~~~~~---gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
..+++++.+++++|.+ +.+++++|+ + ++ .++..++.+ ||.|+++.++|.. ...++..| +++.++.+
T Consensus 49 ~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~-----~~~~~~~g-~~~~v~~~ 122 (360)
T 1w23_A 49 VHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKA-----LKEAKLLG-ETHIAAST 122 (360)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHH-----HHHHHTTS-EEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHH-----HHHHHHhC-CeEEeecc
Confidence 4678999999999986 478887766 5 47 666777655 5667776655542 23356679 99888753
Q ss_pred ------CHHHHHh-hcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEccc
Q psy12791 132 ------KIENLIK-YIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLT 204 (393)
Q Consensus 132 ------d~~~l~~-~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~s 204 (393)
|++++++ .+++++++|++++|+||||.++| + +++++ |+++|+|++|+.+....++. ..|++++|+|
T Consensus 123 ~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~--~---i~~~~-~~~li~D~a~~~~~~~~~~~-~~di~~~s~s 195 (360)
T 1w23_A 123 KANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ--N---FPEIN-HAPLIADMSSDILSRPLKVN-QFGMIYAGAQ 195 (360)
T ss_dssp GGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECS--S---CCCCC-SSCEEEECTTTTTSSCCCGG-GCSEEEEETT
T ss_pred cccCcCCccchHhhccCCCCCEEEEeCCCCCcceecc--c---ccccC-CceEEEechhhcCCCCcCcc-cCCEEEEEcc
Confidence 6678888 88888999999999999999988 3 33478 99999999998765322221 2389999999
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHHHH------------hcCCCCCHHHHHHHHhccC------CHHHHHHHHHHHH
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKFLQN------------SMGVVPSPFDCWLVTRGLK------TLPCRLKEHERGS 266 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 266 (393)
|++ |++| +||++++ ++++++++.... ......+......+...++ .+...+++..+++
T Consensus 196 K~~-~~~G--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~ 271 (360)
T 1w23_A 196 KNL-GPSG--VTVVIVK-KDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKA 271 (360)
T ss_dssp TTT-SCTT--CEEEEEE-HHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred ccc-CCCC--cEEEEEc-HHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999 6888 8999998 666665432110 1112333333322222222 2445566777888
Q ss_pred HHHHHHHhhCCCcceEeC-CCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcc
Q psy12791 267 IEVAKFLESHPCVKGVLH-PGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPA 345 (393)
Q Consensus 267 ~~l~~~l~~~~~~~~v~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~ 345 (393)
+.+.+.|++++++..... +. ...+.+++|.++ +......+++.+...++.+..|..
T Consensus 272 ~~l~~~L~~~~~~~~~~~~~~--------------~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~~~~~~~-------- 328 (360)
T 1w23_A 272 KIIYDTIDESNGFYVGHAEKG--------------SRSLMNVTFNLR-NEELNQQFLAKAKEQGFVGLNGHR-------- 328 (360)
T ss_dssp HHHHHHHHTTTTSSEESSCGG--------------GBCSSEEEEECS-SHHHHHHHHHHHHHTTEESCBCCT--------
T ss_pred HHHHHHHHHccCcccccCCch--------------hccCcEEEEEcC-CCccHHHHHHHHHHCCeeeecCCC--------
Confidence 888888987654311110 11 011348899884 444566677776555554433211
Q ss_pred cccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 346 EMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 346 ~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+++||+|++..+++++++.+.++|+++.
T Consensus 329 -----------------~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 357 (360)
T 1w23_A 329 -----------------SVGGCRASIYNAVPIDACIALRELMIQFK 357 (360)
T ss_dssp -----------------TTCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred -----------------CCCeEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 14789999999999999999999998764
No 162
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.93 E-value=3.2e-24 Score=203.44 Aligned_cols=304 Identities=19% Similarity=0.147 Sum_probs=198.7
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-------cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-------LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV 128 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-------~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~ 128 (393)
+.+...++|+++|+++|.++.+++++|++++ .++.++ +++||+|+++.++|++ +...++..|++++.+
T Consensus 32 ~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~----~~~~~~~~g~~~~~~ 107 (390)
T 3b8x_A 32 MGEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWST----TYYPLQQYGLRVKFV 107 (390)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHH----HHHHHHHTTCEEEEE
T ss_pred CChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHH----HHHHHHHcCCEEEEE
Confidence 4688999999999999999999999999987 777777 7889999999999986 344566789999998
Q ss_pred CCC------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEc
Q psy12791 129 DLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYS 202 (393)
Q Consensus 129 ~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S 202 (393)
+.+ |++++++.+++++++|++++ ++|...++++|.++|+++ |+++|+|++|+.+........+.+..+.+
T Consensus 108 ~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~~~~-~~~li~D~a~~~g~~~~~~~~g~~~~~~~ 183 (390)
T 3b8x_A 108 DIDINTLNIDIESLKEAVTDSTKAILTVN---LLGNPNNFDEINKIIGGR-DIILLEDNCESMGATFNNKCAGTFGLMGT 183 (390)
T ss_dssp CBCTTTCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHHTTS-CCEEEEECTTCTTCEETTEETTSSSSEEE
T ss_pred ecCccccCcCHHHHHHHhCcCCeEEEEEC---CccChhhHHHHHHHHHHc-CCEEEEECcCcccCEECCcccccccceEE
Confidence 875 78999999988899999874 668889999999999999 99999999999654432222344333344
Q ss_pred cccccc-CC-CCceEEEEEecChHHHHHHHHHHHhc-----------------------------CC--CCCHHHHHHHH
Q psy12791 203 LTKYMN-GH-SDVVMGATVTNDDSLQARLKFLQNSM-----------------------------GV--VPSPFDCWLVT 249 (393)
Q Consensus 203 ~sK~~~-G~-~G~r~G~~~~~~~~~~~~~~~~~~~~-----------------------------~~--~~~~~~~~~~~ 249 (393)
++|..+ ++ +| ++|+++++++++.++++...... |. ..++..++++.
T Consensus 184 ~s~~~~k~~~~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l 262 (390)
T 3b8x_A 184 FSSFYSNHIATM-EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGI 262 (390)
T ss_dssp EECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHH
T ss_pred EEccCCCCCccC-CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHH
Confidence 444321 11 22 46999998667777665433210 11 14556666665
Q ss_pred hccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-HHHHHHHHHhcCcc
Q psy12791 250 RGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-AEETRIFLESLLIF 328 (393)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~ 328 (393)
..++.+....++..++...+.+.|++++++. + +.-.. ......+.+.++.. ....+.+.+.|...
T Consensus 263 ~~l~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~--~~~~~-----------~~~~~~~~i~~~~~~~~~~~~l~~~L~~~ 328 (390)
T 3b8x_A 263 EQLKKLPRFISVRRKNAEYFLDKFKDHPYLD-V--QQETG-----------ESSWFGFSFIIKKDSGVIRKQLVENLNSA 328 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE-E--CCCCS-----------BCCCCEEEEEECTTSCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-c--CCCCC-----------CcccEEEEEEecCcCcccHHHHHHHHHHC
Confidence 5566666677777788888888888776643 2 11000 00112356666410 01223344444333
Q ss_pred ccccccCCccccccC-ccc----cc-CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHH
Q psy12791 329 RCAESLGGIESLADL-PAE----MT-HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQAL 387 (393)
Q Consensus 329 ~~~~~~g~~~s~~~~-~~~----~~-~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al 387 (393)
++.++....-+.+.. +.. .. ...++..+.. ..+.|||+++...++++++.+.++|
T Consensus 329 gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 329 GIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYL----DKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp TBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHH----HHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred CCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHH----hcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 454443111111111 110 00 1122222211 1468999999999999999998876
No 163
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.93 E-value=9.8e-26 Score=214.40 Aligned_cols=313 Identities=15% Similarity=0.120 Sum_probs=199.1
Q ss_pred CCCC-CCC--CCCCcc-CCeeeeCCCCCCCCCccc-cCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcC-
Q psy12791 23 QWRS-QCV--IPPIIL-STTFKQNTPGQPPQGFEY-SRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLS- 95 (393)
Q Consensus 23 ~~~~-~~~--~~p~~~-~~~~~~~~~~~~~~~~~y-~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~- 95 (393)
.++| +++ .+|+++ ++.+.+++.+.+.....+ ..|+.+...++++.+++++|.++.+++++|++++ .++..+..
T Consensus 41 ~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al~~~~~~ 120 (397)
T 2ord_A 41 AYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIARKY 120 (397)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCTTSEEHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEECCccccccccCCCCHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHH
Confidence 4567 444 267765 444554443321111111 1234578899999999999976666777777787 55555542
Q ss_pred -----C-CCeEEEcCCCccchHHHHHHhcccCCcE------------EEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcc
Q psy12791 96 -----A-GDHIISGDDVYGGTYRYFAQVAPKIGLE------------VDFVDLRKIENLIKYIKPNTKMVWIENPTNPLM 157 (393)
Q Consensus 96 -----~-gd~vl~~~~~y~~~~~~~~~~~~~~g~~------------v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG 157 (393)
+ ++.|++.+|+|++.+. ..++..|.+ ++.++.+|++++++.+++++++|++++|+||||
T Consensus 121 ~~~~~~~~~~vi~~~~~yh~~~~---~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG 197 (397)
T 2ord_A 121 GKKKSEKKYRILSAHNSFHGRTL---GSLTATGQPKYQKPFEPLVPGFEYFEFNNVEDLRRKMSEDVCAVFLEPIQGESG 197 (397)
T ss_dssp HHHHCTTCCEEEEEBTCCCCSSH---HHHHHSBCHHHHGGGCSCCTTEEEECTTCHHHHHHHCCTTEEEEEECSEECTTT
T ss_pred hhcCCCCCceEEEEcCCcCCCch---hhhhccCChhhccccCCCCCCeeEecCCCHHHHHHHhhcCeEEEEEecccCCCC
Confidence 4 4789999999976432 223334443 778888899999999988899999999999999
Q ss_pred c-ccC---HHHHHHHHHhCCCcEEEEeCccCccccc-CCC-----CCcCcEEEEcccccccCCCCceEEEEEecChHHHH
Q psy12791 158 T-VFD---VKAISAVVKQHPDILLVLDNTFLTAYYQ-KSL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQA 227 (393)
Q Consensus 158 ~-~~~---~~~l~~l~~~~~~~~livDea~~~~~~~-~~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~ 227 (393)
. +++ +++|.++|+++ |+++|+||+|+.+... .+. ....|++ |+||++ | +|+|+||++++ +++.
T Consensus 198 ~~~~~~~~l~~l~~l~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~-~-~G~r~G~~~~~-~~~~- 270 (397)
T 2ord_A 198 IVPATKEFLEEARKLCDEY-DALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGL-G-GGVPIGAVIVN-ERAN- 270 (397)
T ss_dssp CEECCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGG-G-TTSCCEEEEEC-STTC-
T ss_pred cccCCHHHHHHHHHHHHHc-CCEEEEEecccCCccCccchhhhhhCCCCCee--eecccc-C-CCcCeEEEEEc-hHhc-
Confidence 9 554 88999999999 9999999999853221 111 1125765 789999 5 78999999998 4454
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHhccCCH--HHHHHHHHHHHHHHHHHHhhC----CCcceEeCCCCCCCcchHHHhhhcC
Q psy12791 228 RLKFLQNSMGVVPSPFDCWLVTRGLKTL--PCRLKEHERGSIEVAKFLESH----PCVKGVLHPGLPSHPNHELAKSQWS 301 (393)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~----~~~~~v~~~~l~~~~~~~~~~~~~~ 301 (393)
.++..........++..+..+...++.+ ....++..++.+.+.+.|++. +.+..+ .
T Consensus 271 ~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------------~ 332 (397)
T 2ord_A 271 VLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEYDVVADV------------------R 332 (397)
T ss_dssp CCCTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE------------------E
T ss_pred ccCCCCcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCceEEE------------------E
Confidence 4432111122234555555444433221 234556666667777777643 211100 1
Q ss_pred CCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHH
Q psy12791 302 GTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIA 381 (393)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~ 381 (393)
+.+.++++.+++. .....+.+.+...++.+..| .++++|+|++...++++++
T Consensus 333 ~~g~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~~---------------------------~~~~iRis~~~~~~~e~i~ 384 (397)
T 2ord_A 333 GMGLMIGIQFREE-VSNREVATKCFENKLLVVPA---------------------------GNNTIRFLPPLTVEYGEID 384 (397)
T ss_dssp EETTEEEEEECTT-SCHHHHHHHHHHTTEECEEE---------------------------TTTEEEECCCTTCCHHHHH
T ss_pred EEeEEEEEEECCh-HHHHHHHHHHHHCCCEEccC---------------------------CCCEEEEECCcCCCHHHHH
Confidence 1357888888531 12344555544334444332 1478999999888888888
Q ss_pred HHHHHHHHhh
Q psy12791 382 DLDQALRKAC 391 (393)
Q Consensus 382 ~l~~al~~~~ 391 (393)
.+.++|+++.
T Consensus 385 ~~~~~l~~~l 394 (397)
T 2ord_A 385 LAVETLKKVL 394 (397)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887654
No 164
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.93 E-value=1e-25 Score=216.17 Aligned_cols=317 Identities=15% Similarity=0.071 Sum_probs=192.3
Q ss_pred CCCC-CCCCC--CCc-cCCeeeeCCCCCCCCC-c-cccCCCCchHHHHHHHHHHHh-C-CCcEEEeccHHH-HH-HHHH-
Q psy12791 23 QWRS-QCVIP--PII-LSTTFKQNTPGQPPQG-F-EYSRSNNPTRRNLERCIASLE-E-AKHGLCYSSGLG-AV-TAVT- 91 (393)
Q Consensus 23 ~~~~-~~~~~--p~~-~~~~~~~~~~~~~~~~-~-~y~~~~~~~~~~lr~~la~~~-~-~~~~i~~~~G~~-al-~~~~- 91 (393)
.++| +++.+ |++ +++.+.+++.+.+... + ....++.+...+|+++||+++ + .++.+++++|++ ++ .++.
T Consensus 42 ~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~ 121 (426)
T 1sff_A 42 EYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKI 121 (426)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHH
T ss_pred EEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHH
Confidence 4566 45444 665 4455555443332211 1 112345688899999999999 5 336666666655 56 5544
Q ss_pred --HhcCCCCeEEEcCCCccchHHHHHHhccc-------CCc---EEEeeCCC----------CHHHHHhhcC-----CCC
Q psy12791 92 --HLLSAGDHIISGDDVYGGTYRYFAQVAPK-------IGL---EVDFVDLR----------KIENLIKYIK-----PNT 144 (393)
Q Consensus 92 --~~~~~gd~vl~~~~~y~~~~~~~~~~~~~-------~g~---~v~~~~~~----------d~~~l~~~l~-----~~~ 144 (393)
.+.++| .|++.+|+|++........... .+. .++.++.+ |++++++.+. +++
T Consensus 122 a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (426)
T 1sff_A 122 ARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDI 200 (426)
T ss_dssp HHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGE
T ss_pred HHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCce
Confidence 456666 8999999998643222222111 111 25555543 5788888775 456
Q ss_pred cEEEEe-cCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccccc-CC--C---CCcCcEEEEcccccccCCCCc
Q psy12791 145 KMVWIE-NPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQ-KS--L---PWGVDIVLYSLTKYMNGHSDV 213 (393)
Q Consensus 145 ~~v~l~-~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~-~~--~---~~~~di~~~S~sK~~~G~~G~ 213 (393)
++|+++ +++| ||.+.+ +++|.++|+++ |++||+||+|+++... .. . ....|++ ||||++ |+ |+
T Consensus 201 ~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~-~~~li~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~-~~-Gl 274 (426)
T 1sff_A 201 AAIVIEPVQGE-GGFYASSPAFMQRLRALCDEH-GIMLIADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSI-AG-GF 274 (426)
T ss_dssp EEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGG-GT-SS
T ss_pred EEEEEecccCC-CCcccCCHHHHHHHHHHHHHc-CCEEEEechhhccCcccchhhhhhcCCCCCEE--EEcccc-cC-CC
Confidence 788774 5677 997776 99999999999 9999999999964221 11 1 1124544 899999 56 99
Q ss_pred eEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhh----CCCcceEeCCCC
Q psy12791 214 VMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLES----HPCVKGVLHPGL 287 (393)
Q Consensus 214 r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l 287 (393)
|+||++++ +++++.+...........++..+..+...++.+.. ..++..++.+.+.+.|+. ++.+..+
T Consensus 275 riG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~----- 348 (426)
T 1sff_A 275 PLAGVTGR-AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDV----- 348 (426)
T ss_dssp CCEEEEEE-HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEE-----
T ss_pred ceEEEEEc-HHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-----
Confidence 99999998 77777654211112223456665555444432221 334445555566666653 2221111
Q ss_pred CCCcchHHHhhhcCCCcceEEEEEcC-------CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhc
Q psy12791 288 PSHPNHELAKSQWSGTSGMLSFYVNG-------GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDAL 360 (393)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~ 360 (393)
.+.+.++++.+.+ +......+.+.+...++.+..|+.
T Consensus 349 -------------~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~----------------------- 392 (426)
T 1sff_A 349 -------------RGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP----------------------- 392 (426)
T ss_dssp -------------EEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST-----------------------
T ss_pred -------------EEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCC-----------------------
Confidence 1125788999841 234455666666544655554321
Q ss_pred CCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 361 GITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 361 g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.++++|++++...++++++.+.++|+++
T Consensus 393 --~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 420 (426)
T 1sff_A 393 --YYNVLRILVPLTIEDAQIRQGLEIISQC 420 (426)
T ss_dssp --TSCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred --CCCEEEEECCccCCHHHHHHHHHHHHHH
Confidence 1578999999888888888887777654
No 165
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.93 E-value=3.9e-25 Score=214.65 Aligned_cols=287 Identities=11% Similarity=0.118 Sum_probs=193.5
Q ss_pred chHHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHHhcCCCCe---EEEcCCCccchHHHHHHhcccCCcEE-----Ee
Q psy12791 59 PTRRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTHLLSAGDH---IISGDDVYGGTYRYFAQVAPKIGLEV-----DF 127 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~~~~~gd~---vl~~~~~y~~~~~~~~~~~~~~g~~v-----~~ 127 (393)
...+++++.+|+++|++ +.|++++|+++ + .++.+++++||. |+++.|+|++....+...++..|+++ ..
T Consensus 111 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~ 190 (465)
T 3e9k_A 111 TGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMI 190 (465)
T ss_dssp GTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEE
T ss_pred HhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEE
Confidence 34577999999999987 67888888776 7 667777766554 99999999987766777778888774 23
Q ss_pred eCCC-----CHHHHHhhcC---CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCC-CCcCcE
Q psy12791 128 VDLR-----KIENLIKYIK---PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSL-PWGVDI 198 (393)
Q Consensus 128 ~~~~-----d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~-~~~~di 198 (393)
.+.+ |+++++++++ +++++|++++|+||||.+.|+++|.++|+++ |+++++|++|+.+.....+ ..++|+
T Consensus 191 ~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~-g~~vi~D~a~~~g~~~~~~~~~~~D~ 269 (465)
T 3e9k_A 191 KPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAK-GCYVGFDLAHAVGNVELYLHDWGVDF 269 (465)
T ss_dssp CCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHT-TCEEEEECTTTTTTSCCCHHHHTCCE
T ss_pred ecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHc-CCEEEEEhhhhcCCcCCchhhcCCCE
Confidence 3432 7899999985 5789999999999999999999999999999 9999999999876542222 247899
Q ss_pred EEEcccccccCCCCceEEEEEecChHHHHHHHHHHH---------h----------------cCCCCCHHHHHHHHhccC
Q psy12791 199 VLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN---------S----------------MGVVPSPFDCWLVTRGLK 253 (393)
Q Consensus 199 ~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~---------~----------------~~~~~~~~~~~~~~~~~~ 253 (393)
++.|++|+++|.|+ ++|+++++ +++.+.+..... . ..+..+......+...++
T Consensus 270 ~~~s~~K~l~~gp~-~~g~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~ 347 (465)
T 3e9k_A 270 ACWCSYKYLNAGAG-GIAGAFIH-EKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLE 347 (465)
T ss_dssp EEECSSSTTCCCTT-CCCEEEEC-GGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHH
T ss_pred EEECcccccccCCC-ceEEEEEc-HHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHH
Confidence 99999999953343 47898887 666554321100 0 011333333333333332
Q ss_pred C-----HHHHHHHHHHHHHHHHHHHhhC----------CCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHH
Q psy12791 254 T-----LPCRLKEHERGSIEVAKFLESH----------PCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEET 318 (393)
Q Consensus 254 ~-----~~~~~~~~~~~~~~l~~~l~~~----------~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
. +...+++..++...+.+.|+++ +++. +..|. +....+++++|.++.+ .
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~-~~~p~------------~~~~~g~~~~~~~~~~---~ 411 (465)
T 3e9k_A 348 IFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVN-IITPS------------HVEERGCQLTITFSVP---N 411 (465)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEE-ECSCS------------SGGGBCSCEEEEECCT---T
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeE-EeCCC------------CHhhcccEEEEEecCC---H
Confidence 2 3445555666677777777653 3332 22121 0012357888888422 2
Q ss_pred HHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEe-cCCChHHHHHHHHHHHHHhh
Q psy12791 319 RIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSV-GVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 319 ~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~-~~~~~~~~i~~l~~al~~~~ 391 (393)
..+.+.|...++.+.. ..+++||+|+ +.++++++++.+.++|+++.
T Consensus 412 ~~l~~~L~~~Gi~v~~---------------------------~~~~~iRis~~~~~~t~edi~~~~~~l~~~l 458 (465)
T 3e9k_A 412 KDVFQELEKRGVVCDK---------------------------RNPNGIRVAPVPLYNSFHDVYKFTNLLTSIL 458 (465)
T ss_dssp CCHHHHHHTTTEECEE---------------------------ETTTEEEEBCCTTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEec---------------------------CCCCEEEEeCcccCCCHHHHHHHHHHHHHHH
Confidence 2333433333433321 0158999999 79999999999999998764
No 166
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.93 E-value=2.5e-25 Score=213.95 Aligned_cols=314 Identities=13% Similarity=0.050 Sum_probs=195.8
Q ss_pred CCCC-CCC--CCCCc-cCCeeeeCCCCCCCCCcccc-CCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhc--
Q psy12791 23 QWRS-QCV--IPPII-LSTTFKQNTPGQPPQGFEYS-RSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLL-- 94 (393)
Q Consensus 23 ~~~~-~~~--~~p~~-~~~~~~~~~~~~~~~~~~y~-~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~-- 94 (393)
.++| +++ .++++ +++.+.+++.+.+.....++ .++.+...++++.|+++++.++.+++++|++++ .++..+.
T Consensus 66 ~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~a~~~ 145 (433)
T 1z7d_A 66 RYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKW 145 (433)
T ss_dssp EEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCccCCcCCHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHHHHHHHHH
Confidence 4567 442 45776 66666665544322222222 245677889999999999877777777888887 5554332
Q ss_pred -------CCC-CeEEEcCCCccchHHHHHHhcccCC------------cEEEeeCCCCHHHHHhhc-CCCCcEEEEecCC
Q psy12791 95 -------SAG-DHIISGDDVYGGTYRYFAQVAPKIG------------LEVDFVDLRKIENLIKYI-KPNTKMVWIENPT 153 (393)
Q Consensus 95 -------~~g-d~vl~~~~~y~~~~~~~~~~~~~~g------------~~v~~~~~~d~~~l~~~l-~~~~~~v~l~~p~ 153 (393)
.+| |+|++.+++|++.... .....| ..+..++.+|++++++.+ .+++++|+++..+
T Consensus 146 ~~~~~g~~~gr~~vi~~~~~yhg~~~~---~~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~ 222 (433)
T 1z7d_A 146 GYEVKKIPENMAKIVVCKNNFSGRTLG---CISASTTKKCTSNFGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQ 222 (433)
T ss_dssp HHHTSCCCTTCCEEEEETTC-----------------------------CEEEECTTCHHHHHHHHTSTTEEEEEECSSB
T ss_pred hhhccCCCCCCCeEEEEeCCcCCcchh---hhcccCCccccccCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCC
Confidence 467 9999999999864321 122222 356777888999999999 5678888887777
Q ss_pred CCccccc----CHHHHHHHHHhCCCcEEEEeCccCcccc-cCC-----CCCcCcEEEEcccccccCCCC-ceEEEEEecC
Q psy12791 154 NPLMTVF----DVKAISAVVKQHPDILLVLDNTFLTAYY-QKS-----LPWGVDIVLYSLTKYMNGHSD-VVMGATVTND 222 (393)
Q Consensus 154 nptG~~~----~~~~l~~l~~~~~~~~livDea~~~~~~-~~~-----~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~ 222 (393)
|++|.+. ++++|.++|+++ |++||+||+|..+.. ... .....|++ |+||++ | +| +|+||++++
T Consensus 223 ~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l-~-~G~~~~G~v~~~- 296 (433)
T 1z7d_A 223 GEAGVIVPSDNYLQGVYDICKKY-NVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI--LLGKAL-S-GGHYPISAVLAN- 296 (433)
T ss_dssp STTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGG-G-TTSSCCEEEEEC-
T ss_pred CCCCccCCCHHHHHHHHHHHHHc-CCEEEEecCccCCCcCCcchhhHhcCCCCCEE--EECccc-c-CCCCCeEEEEEC-
Confidence 8899876 599999999999 999999999985321 111 11245765 789999 5 68 899999998
Q ss_pred hHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhC----CCcceEeCCCCCCCcchHHH
Q psy12791 223 DSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLESH----PCVKGVLHPGLPSHPNHELA 296 (393)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~----~~~~~v~~~~l~~~~~~~~~ 296 (393)
+++++.+...........++..+..+...++.+. ...++..++.+.+.+.|++. +.+..
T Consensus 297 ~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~--------------- 361 (433)
T 1z7d_A 297 DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRD--------------- 361 (433)
T ss_dssp HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEE---------------
T ss_pred HHHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEE---------------
Confidence 7777665431111122345666655555444332 23445555566666666542 21111
Q ss_pred hhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCCh
Q psy12791 297 KSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGY 376 (393)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~ 376 (393)
.++.+.++++.+.+.......+.+.+...++.+..+ ..+++|++++...+
T Consensus 362 ---~~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~---------------------------~~~~iRi~~~~~~t 411 (433)
T 1z7d_A 362 ---VRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDV---------------------------HDKTIRLTPPLCIT 411 (433)
T ss_dssp ---EEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEE---------------------------TTTEEEECCCTTCC
T ss_pred ---EEeeeeEEEEEEccChhHHHHHHHHHHHCCeEEecC---------------------------CCCEEEEECCcCCC
Confidence 122367889998532012344555554334443321 15789999998888
Q ss_pred HHHHHHHHHHHHHh
Q psy12791 377 TDLIADLDQALRKA 390 (393)
Q Consensus 377 ~~~i~~l~~al~~~ 390 (393)
+++++.+.++|+++
T Consensus 412 ~e~i~~~l~~l~~~ 425 (433)
T 1z7d_A 412 KEQLDECTEIIVKT 425 (433)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888877654
No 167
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.92 E-value=1.6e-24 Score=208.34 Aligned_cols=305 Identities=16% Similarity=0.119 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHhCCC-cEEEeccHHH-HH-HHHHHhc--------CCCCeEEEcCCCccc-------------hHHHHHH
Q psy12791 61 RRNLERCIASLEEAK-HGLCYSSGLG-AV-TAVTHLL--------SAGDHIISGDDVYGG-------------TYRYFAQ 116 (393)
Q Consensus 61 ~~~lr~~la~~~~~~-~~i~~~~G~~-al-~~~~~~~--------~~gd~vl~~~~~y~~-------------~~~~~~~ 116 (393)
..++|+++|+++|.+ +.+++++|++ ++ .++..++ ++||+|+++.|+|+. +...+..
T Consensus 63 ~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~ 142 (432)
T 3a9z_A 63 INTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEH 142 (432)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHH
Confidence 478999999999986 6777777755 57 5555554 589888888888753 1222344
Q ss_pred hcccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCC----------cEEEEe
Q psy12791 117 VAPKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPD----------ILLVLD 180 (393)
Q Consensus 117 ~~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~----------~~livD 180 (393)
.++..|++++.++.+ |++++++.+++++++|++++|+||||.++|+++|.++|+++ + +++|+|
T Consensus 143 ~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~-~~~~~~~~~~~~~livD 221 (432)
T 3a9z_A 143 LVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKAL-NQIRAASGLPRVLVHTD 221 (432)
T ss_dssp HHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHH-HHHHHHHTCCCCEEEEE
T ss_pred HHHhcCcEEEEEecCcccCCcCHHHHHHhccCCceEEEEECcccCcccccCHHHHHHHHHhc-CcccccccCCceEEEEE
Confidence 556679999999873 78999999988899999999999999999999999999999 8 999999
Q ss_pred CccCcccccCCCC---CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH-------HHhcCCCCCHHHHHHHHh
Q psy12791 181 NTFLTAYYQKSLP---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL-------QNSMGVVPSPFDCWLVTR 250 (393)
Q Consensus 181 ea~~~~~~~~~~~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 250 (393)
++|+.+.. +.+ .+.|+++.|+||++ |+ |+||++++++.....++.. ........+......+..
T Consensus 222 ea~~~~~~--~~~~~~~~~d~~~~s~~K~~-g~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a 295 (432)
T 3a9z_A 222 AAQALGKR--RVDVEDLGVDFLTIVGHKFY-GP---RIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGK 295 (432)
T ss_dssp CTTTTTTS--CCCHHHHCCSEEEEEGGGTT-CC---SCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHH
T ss_pred chhhhCCc--ccChhhcCCCEEEEehhHhc-CC---cceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHH
Confidence 99987542 322 36789999999988 53 5999999843212222110 011112334433333322
Q ss_pred ccCC----HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcC
Q psy12791 251 GLKT----LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLL 326 (393)
Q Consensus 251 ~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 326 (393)
.++. +....++..++++.+.+.|++++++. +...+-.. .....+.+++|.+.+.......+.+.+.
T Consensus 296 al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 365 (432)
T 3a9z_A 296 AADLVSENCETYEAHMRDIRDYLEERLEAEFGKR-IHLNSRFP---------GVERLPNTCNFSIQGSQLRGYMVLAQCQ 365 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG-EEESSCCT---------TCCBCTTEEEEEECSTTCCHHHHHHHCS
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHhccCCc-EEEeCCCC---------cccCCCCEEEEEeCCCCCcHHHHHHHhc
Confidence 2322 23344555566677777776543332 22111000 0012345788888531112334555553
Q ss_pred ccccccccCCccccccCcccccCCCCChhhHhhcCCC----CCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 327 IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGIT----DNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 327 ~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~----~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
++....|..++.... ..+.......|.. +++||+|++..+++++++.+.++|+++.
T Consensus 366 --~i~~~~G~~~~~~~~-------~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~ 425 (432)
T 3a9z_A 366 --TLLASVGASCHSDHE-------DRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAV 425 (432)
T ss_dssp --SEECBSSCGGGGGGT-------TSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred --CeEEeccccccCCCC-------CCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 444555544322100 0000111122322 4899999999888888888888887653
No 168
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.92 E-value=3.7e-24 Score=207.29 Aligned_cols=197 Identities=18% Similarity=0.084 Sum_probs=146.6
Q ss_pred CCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEE
Q psy12791 24 WRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHII 101 (393)
Q Consensus 24 ~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl 101 (393)
++| +++.+|...++...+++... ...|. +.+...+||+++|++++.++.+++++|++++ .++..++++|| +
T Consensus 44 ylD~~~~~~~~~~~~~~~~a~~~~---~~~y~--~~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~al~~l~~~gd--i 116 (456)
T 2ez2_A 44 YIDLLTDSGTNAMSDKQWAGMMMG---DEAYA--GSENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQ--Y 116 (456)
T ss_dssp SEECSCSSSCCCCCHHHHHHHTTC---CCCSS--SCHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHCCTTC--E
T ss_pred eeeeccccCCccCCHHHHHHhhcc---hhhcc--cChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCC--E
Confidence 446 55566554444444444321 12243 4678899999999999998888889999888 77777789999 7
Q ss_pred EcCCCccchHHHHHHhcccCCcEEEeeCCC---------------CHHHHHhhcCCCC----cEEEEecCCC-CcccccC
Q psy12791 102 SGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---------------KIENLIKYIKPNT----KMVWIENPTN-PLMTVFD 161 (393)
Q Consensus 102 ~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---------------d~~~l~~~l~~~~----~~v~l~~p~n-ptG~~~~ 161 (393)
++.|+|.+ .+...++..|++++.++.+ |++++++++.+++ ++|++++|+| |||.+++
T Consensus 117 ~~~~~~~~---~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~ 193 (456)
T 2ez2_A 117 VAGNMYFT---TTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVS 193 (456)
T ss_dssp EEESSCCH---HHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCC
T ss_pred eccccccc---hhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCC
Confidence 88899943 2455567789999988653 6889998887655 8999999999 9999998
Q ss_pred ---HHHHHHHHHhCCCcEEEEeCccCcc---------c-c-cCCC-------CCcCcEEEEcccccccCCCCceEEEEEe
Q psy12791 162 ---VKAISAVVKQHPDILLVLDNTFLTA---------Y-Y-QKSL-------PWGVDIVLYSLTKYMNGHSDVVMGATVT 220 (393)
Q Consensus 162 ---~~~l~~l~~~~~~~~livDea~~~~---------~-~-~~~~-------~~~~di~~~S~sK~~~G~~G~r~G~~~~ 220 (393)
+++|.++|+++ |+++|+||+|+.+ . + ..+. ....|+++.|++|++ + +| |+||+++
T Consensus 194 ~~~l~~i~~la~~~-~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~-~-~~-~gG~~~~ 269 (456)
T 2ez2_A 194 MANMRAVRELTEAH-GIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDC-L-VN-IGGFLCM 269 (456)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTT-C-CS-SCEEEEE
T ss_pred HHHHHHHHHHHHHc-CCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccC-C-CC-ceeEEEE
Confidence 99999999999 9999999999863 1 1 1111 123577777888986 4 55 7999998
Q ss_pred cChHHHHHHHHHHH
Q psy12791 221 NDDSLQARLKFLQN 234 (393)
Q Consensus 221 ~~~~~~~~~~~~~~ 234 (393)
+++++++.++....
T Consensus 270 ~~~~~~~~~~~~~~ 283 (456)
T 2ez2_A 270 NDDEMFSSAKELVV 283 (456)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh
Confidence 55888888765543
No 169
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.92 E-value=6.1e-25 Score=210.45 Aligned_cols=313 Identities=14% Similarity=0.046 Sum_probs=194.3
Q ss_pred CCCC-CCCC--CCCccC--CeeeeCCCCCCCCCccc--cCCCCchHHHHHHHHHHHhCCC--cEEEeccHHH-HH-HHHH
Q psy12791 23 QWRS-QCVI--PPIILS--TTFKQNTPGQPPQGFEY--SRSNNPTRRNLERCIASLEEAK--HGLCYSSGLG-AV-TAVT 91 (393)
Q Consensus 23 ~~~~-~~~~--~p~~~~--~~~~~~~~~~~~~~~~y--~~~~~~~~~~lr~~la~~~~~~--~~i~~~~G~~-al-~~~~ 91 (393)
.++| +++. +|++++ +.+.+++.+.+.....| .+|+++...+++++++++++.+ +.+++++|.+ ++ .++.
T Consensus 43 ~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~ 122 (419)
T 2eo5_A 43 KYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIK 122 (419)
T ss_dssp EEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHH
T ss_pred EEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHH
Confidence 4567 5666 678764 66666554432222222 3467778899999999999974 5677766655 57 5555
Q ss_pred HhcC-CCCeEEEcCCCccchHHHHHHhcc----------cCCcEEEeeCCC---------------------CHHHHH-h
Q psy12791 92 HLLS-AGDHIISGDDVYGGTYRYFAQVAP----------KIGLEVDFVDLR---------------------KIENLI-K 138 (393)
Q Consensus 92 ~~~~-~gd~vl~~~~~y~~~~~~~~~~~~----------~~g~~v~~~~~~---------------------d~~~l~-~ 138 (393)
.+.. +||+|++.+|+|++.......... ....+++.++.+ |+++++ +
T Consensus 123 ~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~ 202 (419)
T 2eo5_A 123 VVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDY 202 (419)
T ss_dssp HHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHH
Confidence 4332 389999999999864332222111 112345666553 256788 7
Q ss_pred hcC-----CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-cCC--C---CCcCcEEEEcc
Q psy12791 139 YIK-----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-QKS--L---PWGVDIVLYSL 203 (393)
Q Consensus 139 ~l~-----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~--~---~~~~di~~~S~ 203 (393)
.++ +++++|+++..|||||.+.+ +++|.++|+++ |+++|+||+|.++.. ... . ....|++ ||
T Consensus 203 ~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~-~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~ 279 (419)
T 2eo5_A 203 IFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKY-GILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TL 279 (419)
T ss_dssp HHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EE
T ss_pred HHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCccCcchhhHHhcCCCCCEE--Ee
Confidence 775 34555555444567898776 99999999999 999999999986421 111 1 1234554 79
Q ss_pred cccccCCCC-ceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceE
Q psy12791 204 TKYMNGHSD-VVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGV 282 (393)
Q Consensus 204 sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v 282 (393)
||.+ |. | +|+||++++ ++++ .+. .........++..+..+...++......++..++.+.+.+.|+++ +..+
T Consensus 280 sK~~-~~-G~~riG~~~~~-~~~~-~~~-~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~--~~~~ 352 (419)
T 2eo5_A 280 AKAL-GG-GIMPIGATIFR-KDLD-FKP-GMHSNTFGGNALACAIGSKVIDIVKDLLPHVNEIGKIFAEELQGL--ADDV 352 (419)
T ss_dssp CGGG-GT-TTSCCEEEEEE-GGGC-CC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--SSEE
T ss_pred cccc-cC-CccceEEEEEc-hHhh-cCC-cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhe
Confidence 9999 44 8 999999998 6665 552 111122334566665555555544445556666777777777653 1111
Q ss_pred eCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCC
Q psy12791 283 LHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGI 362 (393)
Q Consensus 283 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~ 362 (393)
.+.+.++++.+.++..... +.+.+...++.+..++
T Consensus 353 ------------------~~~g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~-------------------------- 387 (419)
T 2eo5_A 353 ------------------RGIGLAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG-------------------------- 387 (419)
T ss_dssp ------------------EEETTEEEEECSCHHHHHH-HHHHHHHTTEECEEET--------------------------
T ss_pred ------------------EeeeEEEEEEEecCccHHH-HHHHHHHCCCEEecCC--------------------------
Confidence 1235678888832222344 6666544454443311
Q ss_pred CCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 363 TDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 363 ~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
++++|+++++..++++++.+.++|+++.
T Consensus 388 -~~~lRis~~~~~t~e~i~~~l~~l~~~l 415 (419)
T 2eo5_A 388 -RSAIRVIPPLVISEEEAKQGLDILKKVI 415 (419)
T ss_dssp -TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 4789999999999888888888887653
No 170
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.92 E-value=1.8e-24 Score=202.45 Aligned_cols=308 Identities=15% Similarity=0.079 Sum_probs=200.5
Q ss_pred CCC-CCCCCCCccCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccH-HHHH-HHHHHhcCCCCe
Q psy12791 24 WRS-QCVIPPIILSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSG-LGAV-TAVTHLLSAGDH 99 (393)
Q Consensus 24 ~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G-~~al-~~~~~~~~~gd~ 99 (393)
.++ +++.++ .+++.+.+++.+.+. .+.+.....+..+++++.+++++|.+ +.+++++| ++++ .++..++++||+
T Consensus 15 ~i~l~~~~~~-~~~~~v~~a~~~~~~-~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~gd~ 92 (359)
T 1svv_A 15 PYSFVNDYSV-GMHPKILDLMARDNM-TQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALRPWEA 92 (359)
T ss_dssp CEECSCSCSS-CCCHHHHHHHHHHTT-CCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCCTTEE
T ss_pred eEEecCCCcC-CCCHHHHHHHHHHHh-hccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhCCCCE
Confidence 444 445555 455556555544322 12233334577889999999999976 56666655 4557 777778889999
Q ss_pred EEEcCCCccchHHHHHH--hcccCCcEEEeeCCC----CHHHHHhhcCCC-------CcEEEEecCCCCcccccC---HH
Q psy12791 100 IISGDDVYGGTYRYFAQ--VAPKIGLEVDFVDLR----KIENLIKYIKPN-------TKMVWIENPTNPLMTVFD---VK 163 (393)
Q Consensus 100 vl~~~~~y~~~~~~~~~--~~~~~g~~v~~~~~~----d~~~l~~~l~~~-------~~~v~l~~p~nptG~~~~---~~ 163 (393)
|++++|+|++ +.. .++..|.+++.++.+ |++++++.++++ +++|++++| ||||.++| ++
T Consensus 93 vl~~~~~~~~----~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~ 167 (359)
T 1svv_A 93 VIATQLGHIS----THETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELE 167 (359)
T ss_dssp EEEETTSHHH----HSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHH
T ss_pred EEEcccchHH----HHHHHHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHH
Confidence 9999999985 333 356789999999876 589999888655 899999999 79999999 88
Q ss_pred HHHHHHHhCCCcEEEEeCccCcc---cccCCCC-----CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh
Q psy12791 164 AISAVVKQHPDILLVLDNTFLTA---YYQKSLP-----WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS 235 (393)
Q Consensus 164 ~l~~l~~~~~~~~livDea~~~~---~~~~~~~-----~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~ 235 (393)
+|.++|+++ |+++|+||+|..+ ....... ...|+++.|++|+. |+.| .|+++++ +++++.++.....
T Consensus 168 ~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g-~~~~--~g~l~~~-~~~~~~~~~~~~~ 242 (359)
T 1svv_A 168 DISASCKEH-GLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAG-GMFG--EALIILN-DALKPNARHLIKQ 242 (359)
T ss_dssp HHHHHHHHH-TCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTT-CSSC--EEEEECS-GGGCTTHHHHHHH
T ss_pred HHHHHHHHh-CCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCC-CCCc--eEEEEEc-ccHHHHHHHHHhc
Confidence 899999999 9999999999432 1111111 24689999999985 5655 8999987 7777766544322
Q ss_pred cCCC--CCHHHHHHHHhccCC--HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEE
Q psy12791 236 MGVV--PSPFDCWLVTRGLKT--LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYV 311 (393)
Q Consensus 236 ~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
.+.. ........+...++. +...+++..++.+.+.+.| +.+++. +..|. .+.++++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~-~~~~~----------------~~~~~~~~~ 304 (359)
T 1svv_A 243 RGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGL-EACGIR-LAWPS----------------ASNQLFPIL 304 (359)
T ss_dssp TTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTCC-BSSCC----------------SSSEECBEE
T ss_pred CCcccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCeE-EccCC----------------ccceEEEEc
Confidence 2221 121111111222322 3455666777778888888 444432 11121 135667777
Q ss_pred cCCHHHHHHHHHhcCcc-ccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 312 NGGAEETRIFLESLLIF-RCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 312 ~~~~~~~~~~~~~l~~~-~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
+ . .+.+.+... ++.+ ++. . + ..++++|++++...++++++.+.++|+++
T Consensus 305 ~--~----~~~~~l~~~~gi~v-~~~----~--~-----------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 354 (359)
T 1svv_A 305 E--N----TMIAELNNDFDMYT-VEP----L--K-----------------DGTCIMRLCTSWATEEKECHRFVEVLKRL 354 (359)
T ss_dssp E--H----HHHHHHTTTEECEE-EEE----E--T-----------------TTEEEEEEECCTTCCHHHHHHHHHHHHHC
T ss_pred C--H----HHHHHHHHhcCEEE-Eec----c--c-----------------CCCceEEEEccCcCCHHHHHHHHHHHHHH
Confidence 3 2 344444433 4333 110 0 0 11579999999999999999998888765
Q ss_pred h
Q psy12791 391 C 391 (393)
Q Consensus 391 ~ 391 (393)
.
T Consensus 355 ~ 355 (359)
T 1svv_A 355 V 355 (359)
T ss_dssp -
T ss_pred H
Confidence 4
No 171
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.92 E-value=5.6e-25 Score=211.80 Aligned_cols=317 Identities=14% Similarity=0.073 Sum_probs=203.0
Q ss_pred CCCC-CCC--CCCCc-cCCeeeeCCCCCCCCCcccc-CCCCchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhc--
Q psy12791 23 QWRS-QCV--IPPII-LSTTFKQNTPGQPPQGFEYS-RSNNPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLL-- 94 (393)
Q Consensus 23 ~~~~-~~~--~~p~~-~~~~~~~~~~~~~~~~~~y~-~~~~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~-- 94 (393)
.++| +++ ..+++ .++.+.+++.+.+.....++ .++.+...++++.|++++|.+..+++++|++++ .++..+.
T Consensus 77 ~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~~~~~ 156 (439)
T 2oat_A 77 KYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKW 156 (439)
T ss_dssp EEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTTSEESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHHHHHHHHH
Confidence 4567 443 34565 66666665544322222222 234577899999999999876677777888887 5554432
Q ss_pred -------CCC-CeEEEcCCCccchHHHHHHhcccCC------------cEEEeeCCCCHHHHHhhcC-CCCcEEEEecCC
Q psy12791 95 -------SAG-DHIISGDDVYGGTYRYFAQVAPKIG------------LEVDFVDLRKIENLIKYIK-PNTKMVWIENPT 153 (393)
Q Consensus 95 -------~~g-d~vl~~~~~y~~~~~~~~~~~~~~g------------~~v~~~~~~d~~~l~~~l~-~~~~~v~l~~p~ 153 (393)
.+| |+|++.+++|++..... +...| .++..++.+|++++++.+. +++++|+++..+
T Consensus 157 ~~~~~g~~~g~~~vi~~~~~yhg~~~~~---~~~~g~~~~~~~~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~ 233 (439)
T 2oat_A 157 GYTVKGIQKYKAKIVFAAGNFWGRTLSA---ISSSTDPTSYDGFGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQ 233 (439)
T ss_dssp HHHTTCCCTTCCEEEEETTCCCCSSHHH---HTTCCCHHHHTTSCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEECSSB
T ss_pred hhhccCCCCCCCeEEEEcCCCCCCCHhH---hhcCCChhcccCCCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCC
Confidence 356 89999999997643222 22222 4677888889999999994 667888877777
Q ss_pred CCccccc----CHHHHHHHHHhCCCcEEEEeCccCcccc-cCC-----CCCcCcEEEEcccccccCCCC-ceEEEEEecC
Q psy12791 154 NPLMTVF----DVKAISAVVKQHPDILLVLDNTFLTAYY-QKS-----LPWGVDIVLYSLTKYMNGHSD-VVMGATVTND 222 (393)
Q Consensus 154 nptG~~~----~~~~l~~l~~~~~~~~livDea~~~~~~-~~~-----~~~~~di~~~S~sK~~~G~~G-~r~G~~~~~~ 222 (393)
|++|.+. ++++|.++|+++ |+++|+||+|..+.. ... .....|++ |+||+++ +| +|+||++++
T Consensus 234 ~~~G~~~~~~~~l~~l~~l~~~~-gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~sK~l~--~G~~~~G~v~~~- 307 (439)
T 2oat_A 234 GEAGVVVPDPGYLMGVRELCTRH-QVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKALS--GGLYPVSAVLCD- 307 (439)
T ss_dssp TTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG--TTSSCCEEEEEC-
T ss_pred CCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCCccCCcchhHHHhCCCCcEE--Eeccccc--CCCCCeEEEEEC-
Confidence 8899877 599999999999 999999999975321 111 11235765 8899994 37 899999998
Q ss_pred hHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhc
Q psy12791 223 DSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQW 300 (393)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~ 300 (393)
+++++.+...........++..+..+...++.+. ...++..++.+.+.+.|+.+. ...+ ...
T Consensus 308 ~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-~~~~---------------~~~ 371 (439)
T 2oat_A 308 DDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLP-SDVV---------------TAV 371 (439)
T ss_dssp HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSC-TTTE---------------EEE
T ss_pred HHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhc-CCCc---------------EEE
Confidence 7777665431111222345666655555544332 234555566667777776531 1100 011
Q ss_pred CCCcceEEEEEcCCH-HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHH
Q psy12791 301 SGTSGMLSFYVNGGA-EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDL 379 (393)
Q Consensus 301 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~ 379 (393)
++.|.++++.+.++. .....+.+.+...++.+..+ .++++|++++...++++
T Consensus 372 ~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~---------------------------~~~~iRi~~~~~~t~e~ 424 (439)
T 2oat_A 372 RGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPT---------------------------HGDIIRFAPPLVIKEDE 424 (439)
T ss_dssp EEETTEEEEEECCCSSCCHHHHHHHHHHTTEECCBS---------------------------SSSEEEECCCTTCCHHH
T ss_pred EeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEecC---------------------------CCCEEEEECccCCCHHH
Confidence 224678899885320 12334555554334443321 15789999999999999
Q ss_pred HHHHHHHHHHhh
Q psy12791 380 IADLDQALRKAC 391 (393)
Q Consensus 380 i~~l~~al~~~~ 391 (393)
++.+.++|+++.
T Consensus 425 i~~~l~~l~~~l 436 (439)
T 2oat_A 425 LRESIEIINKTI 436 (439)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888887654
No 172
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.92 E-value=2.7e-25 Score=214.19 Aligned_cols=316 Identities=13% Similarity=0.058 Sum_probs=196.2
Q ss_pred CCCCC-CCCCC--CCc-cCCeeeeCCCCCCCCC--ccccCCCCchHHHHHHHHHHHhC--C-CcEEEeccHHHHH-HHHH
Q psy12791 22 DQWRS-QCVIP--PII-LSTTFKQNTPGQPPQG--FEYSRSNNPTRRNLERCIASLEE--A-KHGLCYSSGLGAV-TAVT 91 (393)
Q Consensus 22 ~~~~~-~~~~~--p~~-~~~~~~~~~~~~~~~~--~~y~~~~~~~~~~lr~~la~~~~--~-~~~i~~~~G~~al-~~~~ 91 (393)
..++| +++.+ |++ .++.+.+++.+.+... +.+..++++...++++.|+++++ . ++.+++++|++++ .++.
T Consensus 43 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~ 122 (439)
T 3dxv_A 43 RELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYR 122 (439)
T ss_dssp CEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHH
T ss_pred CEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHH
Confidence 35567 55544 555 4445554433322111 22345567888999999999984 4 3566666667777 5555
Q ss_pred Hh--cCCCCeEEEcCCCccchHHHHHHhcccCCcE--------------EEeeCCC----------CHHHHHhhc----C
Q psy12791 92 HL--LSAGDHIISGDDVYGGTYRYFAQVAPKIGLE--------------VDFVDLR----------KIENLIKYI----K 141 (393)
Q Consensus 92 ~~--~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~--------------v~~~~~~----------d~~~l~~~l----~ 141 (393)
.+ ..+++.|++.++.|++.+. ......|.. +..++.+ |++++++.+ .
T Consensus 123 ~~~~~~~~~~vi~~~~~yhg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 199 (439)
T 3dxv_A 123 AIVKATGRSGVIAFAGAYHGCTV---GSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPA 199 (439)
T ss_dssp HHHHHHSCCEEEEETTCCCCSSH---HHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCT
T ss_pred HHHHHhCCCEEEEECCCCCCCcH---HHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCC
Confidence 43 3466789998999876432 222222221 2344544 588999988 5
Q ss_pred CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccccc-C-----CCCCcCcEEEEcccccccCCC
Q psy12791 142 PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQ-K-----SLPWGVDIVLYSLTKYMNGHS 211 (393)
Q Consensus 142 ~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~-~-----~~~~~~di~~~S~sK~~~G~~ 211 (393)
+++++|++++++|++|.+.+ +++|.++|++| |++||+||+|+++... . ......|++ |+||.+ | +
T Consensus 200 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~-~-~ 274 (439)
T 3dxv_A 200 GSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAH-GILVVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGL-G-G 274 (439)
T ss_dssp TCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGG-G-T
T ss_pred CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchh-c-C
Confidence 56889999999999999998 99999999999 9999999999853211 1 111235665 899999 4 4
Q ss_pred CceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhh----CCCcceEeCC
Q psy12791 212 DVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLES----HPCVKGVLHP 285 (393)
Q Consensus 212 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~----~~~~~~v~~~ 285 (393)
|+|+||++++ +++++.+......... .++..+..+...++.+. ...++..++.+.+.+.|++ ++.+..+
T Consensus 275 G~riG~~~~~-~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--- 349 (439)
T 3dxv_A 275 GLPLSAVIAP-AEILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDI--- 349 (439)
T ss_dssp TSCCEEEEEE-HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE---
T ss_pred CcceEEEEEC-HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE---
Confidence 9999999997 7887766433222222 55666555544443221 2344444555555555543 3433221
Q ss_pred CCCCCcchHHHhhhcCCCcceEEEEEc-------CCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHh
Q psy12791 286 GLPSHPNHELAKSQWSGTSGMLSFYVN-------GGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRD 358 (393)
Q Consensus 286 ~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~ 358 (393)
.+.+.++++.+. ++......+.+.+...++.+..++
T Consensus 350 ---------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---------------------- 392 (439)
T 3dxv_A 350 ---------------RGRGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVG---------------------- 392 (439)
T ss_dssp ---------------EEETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEES----------------------
T ss_pred ---------------EEEEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecC----------------------
Confidence 123577888772 134556666666654455544331
Q ss_pred hcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 359 ALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 359 ~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..++++|++++...++++++.+.++|+++
T Consensus 393 ---~~~~~iRi~~~~~~t~e~i~~~l~~l~~~ 421 (439)
T 3dxv_A 393 ---MNGNVLEFTPPLTITETDIHKALDLLDRA 421 (439)
T ss_dssp ---TTSCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ---CCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 11589999999988888887777777654
No 173
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.92 E-value=8.2e-23 Score=194.04 Aligned_cols=304 Identities=13% Similarity=0.074 Sum_probs=201.5
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHh-cCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-----
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHL-LSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----- 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~-~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----- 131 (393)
+...++|+++|+++|.++.+++++|++++ .++.++ +++||+|+++.|+|+++ ...++..|++++.++.+
T Consensus 32 ~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~----~~~~~~~g~~~~~v~~~~~~~~ 107 (394)
T 1o69_A 32 EFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIAS----VAPICYLKAKPVFIDCDETYNI 107 (394)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGG----THHHHHTTCEEEEECBCTTSSB
T ss_pred hHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHH----HHHHHHcCCEEEEEEeCCCCCc
Confidence 45899999999999987667777777778 777777 89999999999999974 44456689999999864
Q ss_pred CHHHHHhhcCC---CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC--C-C-CcCcEEEEccc
Q psy12791 132 KIENLIKYIKP---NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS--L-P-WGVDIVLYSLT 204 (393)
Q Consensus 132 d~~~l~~~l~~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~--~-~-~~~di~~~S~s 204 (393)
|++++++.+++ ++++|++++ |||...++++|.++|+++ |+++|+|++|+.+..... . . .+.|+...|.+
T Consensus 108 d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~ 183 (394)
T 1o69_A 108 DVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKEN-DIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGN 183 (394)
T ss_dssp CHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHT-TCEEEEECTTCTTCEETTEETTSSSSEEEEECCTT
T ss_pred CHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHc-CCEEEEECcCcccceeCCcccccccCcEEEEEeCC
Confidence 78999988875 689999986 899999999999999999 999999999985332111 1 1 12344444447
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHHHHhcCCC--------------CCHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVV--------------PSPFDCWLVTRGLKTLPCRLKEHERGSIEVA 270 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (393)
|.+ | |.|+||++++++++++.++......... .++..+.++...++.+...+++..++.+.+.
T Consensus 184 K~l-~--~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~ 260 (394)
T 1o69_A 184 KII-T--TSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYK 260 (394)
T ss_dssp SSS-C--CSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred ccC-C--CCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766 3 3479999996688888886653321100 2345555554456777777888888888888
Q ss_pred HHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH--------------------HHHHHHHHhcCcccc
Q psy12791 271 KFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA--------------------EETRIFLESLLIFRC 330 (393)
Q Consensus 271 ~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~l~~~~~ 330 (393)
+.|++. +. ..+. ..... .. ..+++|.++.+. ...+.+.+.|...++
T Consensus 261 ~~L~~~--~~--~~~~-~~~~~--------~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI 326 (394)
T 1o69_A 261 EFLGEY--FS--FLDE-LENSR--------SN-RWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQI 326 (394)
T ss_dssp HHHTTT--EE--CCCC-CTTEE--------CC-CSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTC
T ss_pred HHhccc--cc--ccCC-CCCCc--------ce-eEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCC
Confidence 888764 21 1121 00000 01 125677774211 245556666655567
Q ss_pred ccccCCccccccCcccccCC--CCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 331 AESLGGIESLADLPAEMTHK--SIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 331 ~~~~g~~~s~~~~~~~~~~~--~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
.++.|..+.. +.|...... .++..... ....+|+..+..+++++++.+.++|+++.+
T Consensus 327 ~v~~~~~~~~-~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 327 ETRPLWKAMH-TQEVFKGAKAYLNGNSELF----FQKGICLPSGTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp CCBCCCCCGG-GCGGGTTCEEEECSHHHHH----HHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred cccccCCccc-cchhhhccCCCCChHHHHH----hcCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 6666543211 111110000 01111111 124677777999999999999999987753
No 174
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.92 E-value=1.3e-24 Score=206.76 Aligned_cols=315 Identities=11% Similarity=0.036 Sum_probs=192.0
Q ss_pred CCCCCCccCCeeeeCCCCCCCCCcc-ccCCCC--chHHHHHHHHHHHhCCC--cEEEe-ccHHH-HH-HHHHHhcCCCCe
Q psy12791 28 CVIPPIILSTTFKQNTPGQPPQGFE-YSRSNN--PTRRNLERCIASLEEAK--HGLCY-SSGLG-AV-TAVTHLLSAGDH 99 (393)
Q Consensus 28 ~~~~p~~~~~~~~~~~~~~~~~~~~-y~~~~~--~~~~~lr~~la~~~~~~--~~i~~-~~G~~-al-~~~~~~~~~gd~ 99 (393)
.+..|..+++.+.+++.+....... +.++++ +..+++|+.+|+++|.+ +.+++ ++|++ ++ .++.+++++| .
T Consensus 44 ~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v 122 (398)
T 2fyf_A 44 FGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR-S 122 (398)
T ss_dssp CCSSSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC-E
T ss_pred ccCCCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC-e
Confidence 4456666776777766542101111 123322 34678999999999986 46776 66655 57 6777788887 2
Q ss_pred EEEcCCCccchHHHHHHhcccC--CcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEE
Q psy12791 100 IISGDDVYGGTYRYFAQVAPKI--GLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILL 177 (393)
Q Consensus 100 vl~~~~~y~~~~~~~~~~~~~~--g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~l 177 (393)
+++....|... +...+... |.+++.++.++-......+.+++++|++++|+||||.++|+++|.++ + |+++
T Consensus 123 ~~v~~~~~~~~---~~~~~~~~~~g~~~~~v~~~~g~~~~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~---~-~~~v 195 (398)
T 2fyf_A 123 LHLTYGEFSAK---FASAVSKNPFVGEPIIITSDPGSAPEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGS---D-DALV 195 (398)
T ss_dssp EEEECSHHHHH---HHHHHHHCTTSCCCEEEECCTTCCCCCCCCTTCSEEEEESEETTTTEECCCCCCTTC---C--CEE
T ss_pred EEEeCCHHHHH---HHHHHHHhCCCCceEEEecCCCCCCCccccCCCCEEEEeCcCCCcceecchHHhhhh---c-CCeE
Confidence 33344444321 12223333 77777776641000111356679999999999999999999888876 7 9999
Q ss_pred EEeCccCcccccCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHH---------------------hc
Q psy12791 178 VLDNTFLTAYYQKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN---------------------SM 236 (393)
Q Consensus 178 ivDea~~~~~~~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~---------------------~~ 236 (393)
|+|++|+.+.....+ .+.|+++.|+||++ |++| ++||++++ +++++.++.... ..
T Consensus 196 ivD~a~~~~~~~~~~-~~~di~~~s~sK~~-~~~g-g~g~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (398)
T 2fyf_A 196 VIDATSGAGGLPVDI-AETDAYYFAPQKNF-ASDG-GLWLAIMS-PAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQT 271 (398)
T ss_dssp EEECTTTTTTSCCCG-GGCSEEEECTTSTT-CSCS-SEEEEEEC-HHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCC
T ss_pred EEEeccccCCcccCc-ccCcEEEEecCccc-CCCC-ceEEEEEC-HHHHHHhhcccccCCCCCcEEehHHHhhhcccCCC
Confidence 999999876532222 24789999999999 5675 49999997 788777643210 01
Q ss_pred CCCCCHHHHHHHHhccCC------HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEE
Q psy12791 237 GVVPSPFDCWLVTRGLKT------LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFY 310 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 310 (393)
....+...+..+...++. +....++..++++.+.+.|++++++. +..+. +. ...+.+++|.
T Consensus 272 ~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~----~~--------~~~~~~~~~~ 338 (398)
T 2fyf_A 272 YNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTT-PFVTD----PG--------LRSQVVGTID 338 (398)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEE-ESCCS----GG--------GBCSSEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCce-eccCC----hh--------hcCCcEEEEE
Confidence 122333332222222221 45566677778888888998776543 21101 00 0112388998
Q ss_pred EcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 311 VNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 311 ~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
++. ......+.+.|...++.+..|.. ...++++|+|++..+++++++.+.++|+++
T Consensus 339 ~~~-~~~~~~l~~~L~~~gI~v~~g~~-----------------------~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 394 (398)
T 2fyf_A 339 FVD-DVDAGTVAKILRANGIVDTEPYR-----------------------KLGRNQLRVAMFPAVEPDDVSALTECVDWV 394 (398)
T ss_dssp ECT-TSCHHHHHHHHHHTTCBCCSCCT-----------------------TTCSSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCC-CCCHHHHHHHHHHCCcEEecCcc-----------------------cCCCCEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 842 11233444544433555443310 011579999999999999999999998876
Q ss_pred h
Q psy12791 391 C 391 (393)
Q Consensus 391 ~ 391 (393)
.
T Consensus 395 l 395 (398)
T 2fyf_A 395 V 395 (398)
T ss_dssp H
T ss_pred H
Confidence 4
No 175
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.91 E-value=5.6e-24 Score=209.03 Aligned_cols=211 Identities=16% Similarity=0.117 Sum_probs=151.1
Q ss_pred HHHHHHHHHhCCC---cE---EEeccHHHHH-HHHHHhcCCC--------CeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 63 NLERCIASLEEAK---HG---LCYSSGLGAV-TAVTHLLSAG--------DHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 63 ~lr~~la~~~~~~---~~---i~~~~G~~al-~~~~~~~~~g--------d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
++++.+++++|.+ +. +++++|++++ .++.++..+| |+|+++.++|.+ +...++..|++++.
T Consensus 143 ~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~----~~~~~~~~G~~v~~ 218 (514)
T 3mad_A 143 EVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAA----FDKAAQYFGIKLVR 218 (514)
T ss_dssp HHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTH----HHHHHHHHTCEEEE
T ss_pred HHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchH----HHHHHHHcCCeeEE
Confidence 4556668888877 44 5555556667 6666666655 899999999985 66777788999999
Q ss_pred eCCC-----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc---------CCC-
Q psy12791 128 VDLR-----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ---------KSL- 192 (393)
Q Consensus 128 ~~~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~---------~~~- 192 (393)
++.+ |++++++++++++++|++++|+||||.+.|+++|.++|+++ |+++|+|++|+.+... .++
T Consensus 219 v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~-~i~livDea~~~~~~~~~~~~g~~~~~~~ 297 (514)
T 3mad_A 219 TPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEH-GIGCHVDACLGGFILPWAERLGYPVPPFD 297 (514)
T ss_dssp ECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHH-TCEEEEECTTTTTTHHHHHHTTCCCCCCS
T ss_pred eeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHh-CCeEEEecccccccchhHHhcCCCCCccc
Confidence 9976 89999999998999999999999999999999999999999 9999999999875431 112
Q ss_pred --CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc----------CCCCCH---HHHHHHHhcc--CCH
Q psy12791 193 --PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM----------GVVPSP---FDCWLVTRGL--KTL 255 (393)
Q Consensus 193 --~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~----------~~~~~~---~~~~~~~~~~--~~~ 255 (393)
..+.|+++.|++|++.|+ .++|+++++++.+..........+ .+.... ..++.+.+.+ ..+
T Consensus 298 ~~~~g~d~~~~s~~K~l~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~ 375 (514)
T 3mad_A 298 FRLEGVTSVSADTHKYGYGA--KGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGY 375 (514)
T ss_dssp TTSTTCCEEEECTTTTTCCC--SSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEEECchhccCCC--CCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHH
Confidence 247899999999996444 458999998554433110000000 111111 2223333222 234
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCcc
Q psy12791 256 PCRLKEHERGSIEVAKFLESHPCVK 280 (393)
Q Consensus 256 ~~~~~~~~~~~~~l~~~l~~~~~~~ 280 (393)
...+++..++++.+.+.|++++++.
T Consensus 376 ~~~~~~~~~~~~~l~~~L~~~~g~~ 400 (514)
T 3mad_A 376 LDATRRILQAADRLKAGVRAIPSLK 400 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSTTCE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 5567777788888999998776654
No 176
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.8e-24 Score=209.43 Aligned_cols=274 Identities=15% Similarity=0.183 Sum_probs=178.5
Q ss_pred HHHHHHHHHhCCC---cEEEeccH-HHHH-HHHHHhcC-----CC---CeEEEcCCCccchHHHHHHhcccCCcEEEeeC
Q psy12791 63 NLERCIASLEEAK---HGLCYSSG-LGAV-TAVTHLLS-----AG---DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD 129 (393)
Q Consensus 63 ~lr~~la~~~~~~---~~i~~~~G-~~al-~~~~~~~~-----~g---d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~ 129 (393)
++++.+++++|.+ +.+++++| ++++ .++.++.+ +| |+|+++.++|.+ +...++..|++++.++
T Consensus 111 ~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~----~~~~~~~~G~~~~~v~ 186 (497)
T 3mc6_A 111 EVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAG----FDKAAYYFGMKLRHVE 186 (497)
T ss_dssp HHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHH----HHHHHHHSCCEEEEEC
T ss_pred HHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHH----HHHHHHHcCCeEEEEe
Confidence 4556677788876 45555555 5566 66655543 45 899999999985 6677788899999998
Q ss_pred CC------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc---------C-CC-
Q psy12791 130 LR------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ---------K-SL- 192 (393)
Q Consensus 130 ~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~---------~-~~- 192 (393)
.+ |++++++++++++++|++++|+||||.+.|+++|.++|+++ |+++|+|++|+.+... . ++
T Consensus 187 ~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~la~~~-g~~livD~a~~~~~~~f~~~~~~~~~~~~~ 265 (497)
T 3mc6_A 187 LDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKY-KLPLHVDSCLGSFIVSFMEKAGYKNLPLLD 265 (497)
T ss_dssp BCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTHHHHT-TCCEEEETTTTHHHHGGGTTTTCCSCCCCS
T ss_pred cCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHHHHHh-CCEEEEECcchhhhhhhhhhhcccCCcccc
Confidence 64 58899999998999999999999999999999999999999 9999999999854321 1 12
Q ss_pred --CCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc-CC---CCC---------HHHHHHHHhcc--CCH
Q psy12791 193 --PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM-GV---VPS---------PFDCWLVTRGL--KTL 255 (393)
Q Consensus 193 --~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~-~~---~~~---------~~~~~~~~~~~--~~~ 255 (393)
..++|+++.|++|++.|+. ++|+++++++.+..........+ +. ... ...++.+.+.+ +.+
T Consensus 266 ~~~~g~d~~~~s~~K~l~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~ 343 (497)
T 3mc6_A 266 FRVPGVTSISCDTHKYGFAPK--GSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGY 343 (497)
T ss_dssp TTSTTCCEEEEETTTTTCCCS--SCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEEECchhhcCCCC--CceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHH
Confidence 2478999999999975454 48999998544432211000110 11 000 22233333332 224
Q ss_pred HHHHHHHHHHHHHHHHHHhh-CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcccccccc
Q psy12791 256 PCRLKEHERGSIEVAKFLES-HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESL 334 (393)
Q Consensus 256 ~~~~~~~~~~~~~l~~~l~~-~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 334 (393)
....++..++++.+.+.|++ ++++..+..+ .++++.|...+ .....+.+.|...++.+..
T Consensus 344 ~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~-----------------~~~~v~~~~~~--~~~~~l~~~L~~~Gi~v~~ 404 (497)
T 3mc6_A 344 IESCQEIVGAAMKFKKYIQENIPDLDIMGNP-----------------RYSVISFSSKT--LNIHELSDRLSKKGWHFNA 404 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTCEECSCC-----------------CSSEEEEECTT--TTHHHHHHHHHTTTCBCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-----------------CeeEEEEeCCC--CCHHHHHHHHHhCCEEEec
Confidence 55667777888899999988 5765422112 24677777642 2234455555443443322
Q ss_pred CCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHH
Q psy12791 335 GGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRK 389 (393)
Q Consensus 335 g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~ 389 (393)
+. .+..+|++++ ..++++++.+.++|++
T Consensus 405 ~~--------------------------~~~~~ri~~~-~~t~e~i~~~~~~L~~ 432 (497)
T 3mc6_A 405 LQ--------------------------KPVALHMAFT-RLSAHVVDEICDILRT 432 (497)
T ss_dssp CC--------------------------SSCCEEEECC-TTTTCTHHHHHHHHHH
T ss_pred CC--------------------------CCCeEEEEEe-CCCHHHHHHHHHHHHH
Confidence 11 1346789987 4455555555555443
No 177
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.91 E-value=5.3e-23 Score=194.36 Aligned_cols=288 Identities=14% Similarity=0.082 Sum_probs=186.8
Q ss_pred chHHHHHHHHHHHhCCCcEEEec-cHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCC-----
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYS-SGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDL----- 130 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~-~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~----- 130 (393)
...+++++.+++++|.++.++++ +|++++.+++..+.+||+|++++++|++.. +...++..| .+++.++.
T Consensus 35 ~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~g~ 112 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVARQLTIDEDCLIIRNGWFSYR--WTQILEKGKFAKSSTVLTAERTED 112 (379)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHHHCTTCEEEEEECSHHHHH--HHHHHHHHCCSSEEEEEECEESSC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHHhCCCCCeEEEEeCCchhHH--HHHHHHHhCCCCceEEEecccccc
Confidence 45678899999999988767665 666667444456789999999999987632 334445555 46666542
Q ss_pred ---------CCHHHHHhhcC-CCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccCCCC---C
Q psy12791 131 ---------RKIENLIKYIK-PNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQKSLP---W 194 (393)
Q Consensus 131 ---------~d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~~~~---~ 194 (393)
.|++++++.+. +++++|++++++||||.++| +++|.++|+++ |+++|+|++++ +. .++. .
T Consensus 113 ~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~-~~~li~D~~~~-g~--~~~~~~~~ 188 (379)
T 3ke3_A 113 TEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSV-GGLLVIDCIAS-GC--VWLDMKEL 188 (379)
T ss_dssp CSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHT-TCEEEEECTTC-TT--CCCCHHHH
T ss_pred ccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHc-CCEEEEEeccc-CC--cccccccc
Confidence 37899999885 47999999999999999999 99999999999 99999999997 43 3333 3
Q ss_pred cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH----------------H-hcC-----CCCCHHHHHHHHhcc
Q psy12791 195 GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ----------------N-SMG-----VVPSPFDCWLVTRGL 252 (393)
Q Consensus 195 ~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~----------------~-~~~-----~~~~~~~~~~~~~~~ 252 (393)
+.|+++.|++|+++|++| +|+++++ +++++.+.... . ..+ .+.+....+.+...+
T Consensus 189 ~~d~~~~s~~K~l~~~~g--~g~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal 265 (379)
T 3ke3_A 189 GIDVLISAPQKGWSSTPC--AGLVMLS-AAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAI 265 (379)
T ss_dssp TCSEEEECTTTTTCSCCC--EEEEEEC-HHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHH
T ss_pred CCCEEEecchhhcCCCCc--eEEEEEC-HHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHH
Confidence 789999999999977777 9999997 77777664210 0 011 133333333222332
Q ss_pred C-----CHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCc
Q psy12791 253 K-----TLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLI 327 (393)
Q Consensus 253 ~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 327 (393)
+ .+....++..+..+.+.+.|+++ ++. +..+. . ...+.+..+.+ ++.+.. +.+.|..
T Consensus 266 ~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~-~~~~~--~-----------~~~~~i~~~~~-~~~~~~--~~~~L~~ 327 (379)
T 3ke3_A 266 LEAKEIGFDILRDAQWELGNRVRKVLTDK-GIE-SVAAE--G-----------FEAPGVVVSYT-ERDDMH--KGSAFAE 327 (379)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSBCT--T-----------CBCSSEEEEEC-SCHHHH--SSHHHHH
T ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCE-ecCCc--c-----------ccCceEEEEcc-CCcchH--HHHHHHH
Confidence 2 23445556666777777777765 222 11111 0 00123444444 333221 1233333
Q ss_pred cccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 328 FRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 328 ~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.++.++.|..++.. .+ ...+.+|+|++..+++++++.+.++|+++.
T Consensus 328 ~Gi~v~~g~~~~~~-~~-----------------~~~~~lRis~~~~~t~~di~~~~~~l~~~l 373 (379)
T 3ke3_A 328 AGLQIAAGVPLKVG-EP-----------------DNFKTFRLGLFGLDKLTDIDGTVERFEKAL 373 (379)
T ss_dssp TTCCCEECCCCSSC-CC-----------------TTCCEEEEECCSHHHHTCHHHHHHHHHHHH
T ss_pred CCeEEeCCcccccc-cc-----------------CcCCEEEEeCCcCCCHHHHHHHHHHHHHHH
Confidence 35555544322110 00 125799999998888888888888877653
No 178
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.91 E-value=2.3e-23 Score=201.49 Aligned_cols=289 Identities=13% Similarity=0.006 Sum_probs=187.8
Q ss_pred HHHHHHHHHHhCCC-c-----EEEecc-HHHHH-HHHHHhcC--------CC-----CeEEEcCCCccchHHHHHHhccc
Q psy12791 62 RNLERCIASLEEAK-H-----GLCYSS-GLGAV-TAVTHLLS--------AG-----DHIISGDDVYGGTYRYFAQVAPK 120 (393)
Q Consensus 62 ~~lr~~la~~~~~~-~-----~i~~~~-G~~al-~~~~~~~~--------~g-----d~vl~~~~~y~~~~~~~~~~~~~ 120 (393)
.++++.+++++|.+ + .+++++ |++++ .++.++.. +| ++|++++ +|. .+...++.
T Consensus 84 ~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~----~~~~~~~~ 158 (452)
T 2dgk_A 84 LRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQI----CWHKFARY 158 (452)
T ss_dssp HHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCH----HHHHHHHH
T ss_pred HHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcH----HHHHHHHH
Confidence 45666678889986 2 244544 45566 55555432 55 5899999 876 46777888
Q ss_pred CCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHh------CCCcEEEEeCccCcccc
Q psy12791 121 IGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQ------HPDILLVLDNTFLTAYY 188 (393)
Q Consensus 121 ~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~------~~~~~livDea~~~~~~ 188 (393)
.|++++.++.+ |+++++++++++|++|++++|+||||.+.|+++|.++|++ + ++++++|++|+.+..
T Consensus 159 ~G~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~-~~~l~vD~a~~~~~~ 237 (452)
T 2dgk_A 159 WDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGI-DIDMHIDAASGGFLA 237 (452)
T ss_dssp TTCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCC-CCCEEEECTTGGGTH
T ss_pred cCceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCC-CCcEEEEcccHHHHH
Confidence 99999999874 7999999999899999999999999999999999999999 5 999999999997642
Q ss_pred ---cC--CCC---CcCcEEEEcccccccCCCCceEEEEEecChHHH-HHHHHHHHhcC----------CCC--CHHHHHH
Q psy12791 189 ---QK--SLP---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQ-ARLKFLQNSMG----------VVP--SPFDCWL 247 (393)
Q Consensus 189 ---~~--~~~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~-~~~~~~~~~~~----------~~~--~~~~~~~ 247 (393)
.. +.. .++|+++.|+||++. .+.++||++++++.+. +.+.....+.+ ... ....++.
T Consensus 238 ~~~~~~~~~~~~~~~~d~~~~~~hK~~~--~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~a 315 (452)
T 2dgk_A 238 PFVAPDIVWDFRLPRVKSISASGHKFGL--APLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYY 315 (452)
T ss_dssp HHHCTTCCCSTTSTTEEEEEEETTTTTC--CCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHH
T ss_pred HhhCccchhhcCCCCCcEEEECcccccC--CCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHH
Confidence 11 122 267899999999763 4456999999755433 33311111111 111 1122222
Q ss_pred HHhc--cCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH---HHHHHHH
Q psy12791 248 VTRG--LKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA---EETRIFL 322 (393)
Q Consensus 248 ~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 322 (393)
+++. .+.+..++++..++++.+.+.|++++++..+ .|+.+ ....+++.|.+++.. .....+.
T Consensus 316 al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~------------~~~~~~v~f~~~~~~~~~~~~~~l~ 382 (452)
T 2dgk_A 316 EFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFI-CTGRP------------DEGIPAVCFKLKDGEDPGYTLYDLS 382 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE-EECCT------------TTBSSEEEEEECTTCCCSCCHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCCCC------------CCCeEEEEEEecCcccccCCHHHHH
Confidence 3222 2335556777778888999999888766533 22210 012467888885310 0123444
Q ss_pred HhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 323 ESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 323 ~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+.|...++.+.. ...+.. + ...+++|+|++..+++++++.+.++|+++.
T Consensus 383 ~~L~~~Gi~v~~------~~~~~~-----~---------~~~~~lRis~~~~~t~e~id~li~~l~~~~ 431 (452)
T 2dgk_A 383 ERLRLRGWQVPA------FTLGGE-----A---------TDIVVMRIMCRRGFEMDFAELLLEDYKASL 431 (452)
T ss_dssp HHHHHTTCBCCE------EECSTT-----C---------TTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeeee------eeCCcc-----c---------CCeEEEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 554433332221 000100 0 014689999999988888988888887653
No 179
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.91 E-value=1.7e-23 Score=199.24 Aligned_cols=325 Identities=10% Similarity=0.041 Sum_probs=200.2
Q ss_pred CCCCCCCCCCCccCCeeeeCCCCCCC-C-Cccc--cC-C-CCchHHHHH----HHHHHHhCCCcE-EEeccHHHHH-HHH
Q psy12791 23 QWRSQCVIPPIILSTTFKQNTPGQPP-Q-GFEY--SR-S-NNPTRRNLE----RCIASLEEAKHG-LCYSSGLGAV-TAV 90 (393)
Q Consensus 23 ~~~~~~~~~p~~~~~~~~~~~~~~~~-~-~~~y--~~-~-~~~~~~~lr----~~la~~~~~~~~-i~~~~G~~al-~~~ 90 (393)
.+++.++++|+ ++.+.+++.+.+. . ...| ++ + +.+...+++ +++++++|.+.. +++++|++++ .++
T Consensus 25 ~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~~~i~~~sGt~a~~~a~ 102 (405)
T 2vi8_A 25 KIELIASENFV--SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHANVQPHSGAQANMAVY 102 (405)
T ss_dssp SEECCTTCCCC--CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHH
T ss_pred ceeeccCcccC--CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceEEEecCcHHHHHHHH
Confidence 44555566776 5566665554432 1 1112 11 1 234445554 699999998854 5579997777 777
Q ss_pred HHhcCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCCC------CHHHHHhhcCC-CCcEEEEecCCCCcccccC
Q psy12791 91 THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDLR------KIENLIKYIKP-NTKMVWIENPTNPLMTVFD 161 (393)
Q Consensus 91 ~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~~------d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~ 161 (393)
..++++||+|+++.|+|+++.... ..+...|. +++.++.+ |++++++.+.+ ++++|++ +|+|. |...+
T Consensus 103 ~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~-~~~~~-~~~~~ 179 (405)
T 2vi8_A 103 FTVLEHGDTVLGMNLSHGGHLTHG-SPVNFSGVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVA-AAAAY-PRIID 179 (405)
T ss_dssp HHHCCTTCEEEEECGGGTCCTTTT-CTTSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSC-CSCCC
T ss_pred HHhcCCCCEEEEecccccchhccc-chhhhccceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEE-eCCCC-CccCC
Confidence 778899999999999998632100 00122333 77777642 78999998875 7898887 44444 56778
Q ss_pred HHHHHHHHHhCCCcEEEEeCccCcccccC---CCC-CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcC
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFLTAYYQK---SLP-WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMG 237 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~~~~~~~---~~~-~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 237 (393)
+++|.++|+++ |+++|+||+|+.+.... +.. ...|++++|+||+++|+.| ||++++ +++.+.++.....+.
T Consensus 180 l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g---G~~~~~-~~~~~~l~~~~~~~~ 254 (405)
T 2vi8_A 180 FAKFREIADEV-GAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG---GMILCQ-EQFAKQIDKAIFPGI 254 (405)
T ss_dssp HHHHHHHHHHH-TCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC---EEEEEC-HHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHc-CCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC---eEEEEc-HHHHHHHHhhhcccc
Confidence 99999999999 99999999999643211 111 1578999999999965766 999997 888888766543222
Q ss_pred -CCCCHHHHHHHHhcc-----CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEE
Q psy12791 238 -VVPSPFDCWLVTRGL-----KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYV 311 (393)
Q Consensus 238 -~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 311 (393)
+..++.....+...+ +.+...+++..++.+.+.+.|++. ++. +..|. +.+.++++.+
T Consensus 255 ~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~---------------~~~~~~~~~~ 317 (405)
T 2vi8_A 255 QGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFT-LVSGG---------------TDNHLLLVDL 317 (405)
T ss_dssp CSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCE-EGGGS---------------CSSSEEEEEC
T ss_pred cCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCe-EecCC---------------CCceEEEEEc
Confidence 222343332222222 133456667777788888888765 332 21111 1256788888
Q ss_pred cCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecC----CChHHHHHHHHHHH
Q psy12791 312 NGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV----EGYTDLIADLDQAL 387 (393)
Q Consensus 312 ~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~----~~~~~~i~~l~~al 387 (393)
+........+.+.|...++.+..|... ..... ...++++|+|++. ..++++++.+.++|
T Consensus 318 ~~~~~~~~~~~~~l~~~gi~v~~g~~~-~~~~~----------------~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l 380 (405)
T 2vi8_A 318 RPQQLTGKTAEKVLDEVGITVNKNTIP-YDPES----------------PFVTSGIRIGTAAVTTRGFGLEEMDEIAAII 380 (405)
T ss_dssp GGGTCCHHHHHHHHHHHTEECEEECCT-TCSSC----------------TTTCSEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHcCceeccCcCc-cccCC----------------CCCCCceEEeeeeeeecCCCHHHHHHHHHHH
Confidence 521012233444444445555544321 00000 0124689999997 34577788888877
Q ss_pred HHhh
Q psy12791 388 RKAC 391 (393)
Q Consensus 388 ~~~~ 391 (393)
+++.
T Consensus 381 ~~~~ 384 (405)
T 2vi8_A 381 GLVL 384 (405)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 180
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.91 E-value=5.6e-24 Score=204.40 Aligned_cols=316 Identities=13% Similarity=0.055 Sum_probs=191.1
Q ss_pred CCCC-CCCC--CCCcc-CCeeeeCCCCCCCCC--ccccCCCCchHHHHHHHHHHHhCCC-cEEEeccH-HHHH-HHHHHh
Q psy12791 23 QWRS-QCVI--PPIIL-STTFKQNTPGQPPQG--FEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSG-LGAV-TAVTHL 93 (393)
Q Consensus 23 ~~~~-~~~~--~p~~~-~~~~~~~~~~~~~~~--~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G-~~al-~~~~~~ 93 (393)
.++| +++. ++++. ++.+.+++.+.+... ..++.|+++...+++++++++++.+ +.+++++| ++++ .++..+
T Consensus 44 ~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~ 123 (429)
T 1s0a_A 44 RLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMA 123 (429)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHH
T ss_pred EEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHH
Confidence 4567 5555 56764 455555443322111 1123455677889999999999754 55666555 5567 555433
Q ss_pred c---C----CCCeEEEcCCCccchHHHHHHhcc------------cCCcEEEeeCC---------CCHHHHHhhcC---C
Q psy12791 94 L---S----AGDHIISGDDVYGGTYRYFAQVAP------------KIGLEVDFVDL---------RKIENLIKYIK---P 142 (393)
Q Consensus 94 ~---~----~gd~vl~~~~~y~~~~~~~~~~~~------------~~g~~v~~~~~---------~d~~~l~~~l~---~ 142 (393)
. + +||+|++.+|+|++.......... ..++..+.++. .|++++++.++ +
T Consensus 124 ~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 203 (429)
T 1s0a_A 124 LQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRH 203 (429)
T ss_dssp HHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTT
T ss_pred HHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCC
Confidence 2 2 689999999999864322211111 11345555542 26888888876 4
Q ss_pred CCcEEEEecC-CCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-cC--C---CCCcCcEEEEcccccccCCC
Q psy12791 143 NTKMVWIENP-TNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-QK--S---LPWGVDIVLYSLTKYMNGHS 211 (393)
Q Consensus 143 ~~~~v~l~~p-~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~--~---~~~~~di~~~S~sK~~~G~~ 211 (393)
++++|+++.+ |||||.+++ +++|.++|+++ |+++|+||+|.++.. .. . .....|++ |+||.++ +
T Consensus 204 ~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~-~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~--~ 278 (429)
T 1s0a_A 204 EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDRE-GILLIADEIATGFGRTGKLFACEHAEIAPDIL--CLGKALT--G 278 (429)
T ss_dssp TEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGG--T
T ss_pred CEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeehhhCCcccchHHHhhhcCCCCCEE--Eeccccc--C
Confidence 5666666555 799998887 99999999999 999999999985321 11 1 12235655 6889994 3
Q ss_pred C-ceEEEEEecChHHHHHHHHHH-----HhcCCCCCHHHHHHHHhccCCH--HHHHHHHHHHHHHHHHHHhhC---CCcc
Q psy12791 212 D-VVMGATVTNDDSLQARLKFLQ-----NSMGVVPSPFDCWLVTRGLKTL--PCRLKEHERGSIEVAKFLESH---PCVK 280 (393)
Q Consensus 212 G-~r~G~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~---~~~~ 280 (393)
| +|+||++++ +++++.+.... .......++..+..+...++.+ ....++..++.+.+.+.|+.+ +.+.
T Consensus 279 G~~~iG~~~~~-~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~ 357 (429)
T 1s0a_A 279 GTMTLSATLTT-REVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVA 357 (429)
T ss_dssp SSSCCEEEEEC-HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGGCTTEE
T ss_pred CCccceEEEeC-HHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 8 899999997 78877765320 0011223455554444443321 123455566667777777653 2221
Q ss_pred eEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhc
Q psy12791 281 GVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDAL 360 (393)
Q Consensus 281 ~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~ 360 (393)
.+ .+.+.++++.+++. .....+.+.+...++.+..
T Consensus 358 ~~------------------~~~g~~~~~~~~~~-~~~~~l~~~l~~~Gi~v~~-------------------------- 392 (429)
T 1s0a_A 358 DV------------------RVLGAIGVVETTHP-VNMAALQKFFVEQGVWIRP-------------------------- 392 (429)
T ss_dssp EE------------------EEETTEEEEEESSC-BCHHHHHHHHHHTTEECCC--------------------------
T ss_pred EE------------------EEeeEEEEEEECCc-ccHHHHHHHHHHCCCEEec--------------------------
Confidence 11 11246788888531 1223344444333443321
Q ss_pred CCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 361 GITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 361 g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+++|+|++...++++++.+.++|+++.
T Consensus 393 --~~~~iRis~~~~~t~e~i~~~~~~l~~~~ 421 (429)
T 1s0a_A 393 --FGKLIYLMPPYIILPQQLQRLTAAVNRAV 421 (429)
T ss_dssp --BTTEEEECCCTTCCHHHHHHHHHHHHHHT
T ss_pred --cCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 03689999999999999999999988754
No 181
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.91 E-value=5e-23 Score=197.21 Aligned_cols=286 Identities=12% Similarity=0.080 Sum_probs=172.2
Q ss_pred HHHHHHHHhCCCcE-EEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCCC------CH
Q psy12791 64 LERCIASLEEAKHG-LCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDLR------KI 133 (393)
Q Consensus 64 lr~~la~~~~~~~~-i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~------d~ 133 (393)
.++.+++++|.+.. +++++|++++ .++..++++||+|++++|+|++... +.......| .+++.++.+ |+
T Consensus 83 a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~d~ 161 (425)
T 3ecd_A 83 AIERVKRLFNAGHANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLT-HGAKPALSGKWFNALQYGVSRDTMLIDY 161 (425)
T ss_dssp HHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECC-------------------CEEEEECCCTTTSSCCH
T ss_pred HHHHHHHHhCCCCceeecCchHHHHHHHHHHccCCCCEEEEccccccccee-cchhhhhcccceeeeecCCCcccCccCH
Confidence 44778899998865 5588999887 7777789999999999999986221 111112233 356666654 89
Q ss_pred HHHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCC--CC--CcCcEEEEccccccc
Q psy12791 134 ENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKS--LP--WGVDIVLYSLTKYMN 208 (393)
Q Consensus 134 ~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~--~~--~~~di~~~S~sK~~~ 208 (393)
+++++.+. +++++|++++|+|| ...++++|.++|+++ |+++|+||+|..+..... .. ...|+++.|+||+++
T Consensus 162 ~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~i~~l~~~~-~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~ 238 (425)
T 3ecd_A 162 DQVEALAQQHKPSLIIAGFSAYP--RKLDFARFRAIADSV-GAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLR 238 (425)
T ss_dssp HHHHHHHHHHCCSEEEEECSCCC--SCCCHHHHHHHHHHH-TCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGC
T ss_pred HHHHHHHhhcCCcEEEEccccCC--CcCCHHHHHHHHHHc-CCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccC
Confidence 99999886 57999999999995 577899999999999 999999999765433111 11 136899999999984
Q ss_pred CCCCceEEEEEecChHHHHHHHHHHHhc-CCCCCH-HHHHH--HH-hcc-CCHHHHHHHHHHHHHHHHHHHhhCCCcceE
Q psy12791 209 GHSDVVMGATVTNDDSLQARLKFLQNSM-GVVPSP-FDCWL--VT-RGL-KTLPCRLKEHERGSIEVAKFLESHPCVKGV 282 (393)
Q Consensus 209 G~~G~r~G~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~--~~-~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v 282 (393)
| .|+||++++++.+.+.+....... ...... ..+.. +. ... +.+....++..++.+.+.+.|.+. ++. +
T Consensus 239 g---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~ 313 (425)
T 3ecd_A 239 G---PRGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVD-L 313 (425)
T ss_dssp C---CSCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E
T ss_pred C---CCcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCe-e
Confidence 4 478999998677777776543321 112222 22211 11 112 234456667777778888888763 222 1
Q ss_pred eCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCC
Q psy12791 283 LHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGI 362 (393)
Q Consensus 283 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~ 362 (393)
..+ ...+.++++.+.+.....+.+.+.+...++.+..+........ ..
T Consensus 314 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~-----------------~~ 361 (425)
T 3ecd_A 314 VTG---------------GTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEK-----------------PT 361 (425)
T ss_dssp GGG---------------SCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSC-----------------TT
T ss_pred ccC---------------CCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCC-----------------CC
Confidence 111 1124678888742111223333333333444442221000000 01
Q ss_pred CCCeEEEEecCCCh----HHHHHHHHHHHHHh
Q psy12791 363 TDNLVRLSVGVEGY----TDLIADLDQALRKA 390 (393)
Q Consensus 363 ~~~~iRls~~~~~~----~~~i~~l~~al~~~ 390 (393)
.++.+|++++..++ +++++.+.++|+++
T Consensus 362 ~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~ 393 (425)
T 3ecd_A 362 ITSGIRLGTPAGTTRGFGAAEFREVGRLILEV 393 (425)
T ss_dssp TCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CccceeccchhheeccCCHHHHHHHHHHHHHH
Confidence 24689999665544 78888887777654
No 182
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.91 E-value=2.7e-23 Score=203.18 Aligned_cols=286 Identities=15% Similarity=0.085 Sum_probs=191.6
Q ss_pred HHHHHHHHHhCCC-------cEEEeccHHHHH-HHHHHhcCC--------CC-----eEEEcCCCccchHHHHHHhcccC
Q psy12791 63 NLERCIASLEEAK-------HGLCYSSGLGAV-TAVTHLLSA--------GD-----HIISGDDVYGGTYRYFAQVAPKI 121 (393)
Q Consensus 63 ~lr~~la~~~~~~-------~~i~~~~G~~al-~~~~~~~~~--------gd-----~vl~~~~~y~~~~~~~~~~~~~~ 121 (393)
++++.+++++|.+ ..+++++|++++ .++.++..+ |+ +|+++.++|.+ +...++..
T Consensus 99 ~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s----~~~~~~~~ 174 (502)
T 3hbx_A 99 RCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVC----WEKFARYF 174 (502)
T ss_dssp HHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHH----HHHHHHHT
T ss_pred HHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHH----HHHHHHHc
Confidence 5666788899987 233466666776 555555443 76 89999999984 67778889
Q ss_pred CcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCC-----CcEEEEeCccCcccc--
Q psy12791 122 GLEVDFVDLR------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHP-----DILLVLDNTFLTAYY-- 188 (393)
Q Consensus 122 g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-----~~~livDea~~~~~~-- 188 (393)
|++++.++.+ |++++++++.+++++|++++|+||||.+.|+++|.++|++++ |+++++|++|+.+..
T Consensus 175 G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~ 254 (502)
T 3hbx_A 175 EVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPF 254 (502)
T ss_dssp TCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHH
T ss_pred CceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhh
Confidence 9999999864 789999999999999999999999999999999999999862 899999999986531
Q ss_pred -cC--CCC---CcCcEEEEcccccccCCCCceEEEEEecChHHHH-HHHHHHHhcCC----------CC--CHHHHHHHH
Q psy12791 189 -QK--SLP---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQA-RLKFLQNSMGV----------VP--SPFDCWLVT 249 (393)
Q Consensus 189 -~~--~~~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~-~~~~~~~~~~~----------~~--~~~~~~~~~ 249 (393)
.. +.. .++|++..|++|++.++.| +|++++++++.+. .+.....+.+. .. ....++.++
T Consensus 255 ~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g--~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al 332 (502)
T 3hbx_A 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQL 332 (502)
T ss_dssp HCTTCCCSTTSTTEEEEEEETTTTTCCCSS--CEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHH
T ss_pred hCcccccccCCCCceEEEECcccccCCCCC--eEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHH
Confidence 11 111 3689999999999866666 8988887555432 11110011111 11 122233333
Q ss_pred h--ccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH-HHHHHHHHhcC
Q psy12791 250 R--GLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA-EETRIFLESLL 326 (393)
Q Consensus 250 ~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ 326 (393)
+ ..+.+..++++..++++.+.+.|+.++++..+ .+. ...+++.|.++++. .....+.+.|.
T Consensus 333 ~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~---------------~~~~~v~f~~~~~~~~~~~~l~~~L~ 396 (502)
T 3hbx_A 333 IRLGHEGYRNVMENCRENMIVLREGLEKTERFNIV-SKD---------------EGVPLVAFSLKDSSCHTEFEISDMLR 396 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEC-SCS---------------SSSSEEEEEESSCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-eCC---------------CCceEEEEEecCCCcCCHHHHHHHHH
Confidence 3 22445667788888899999999988765532 220 01468888885421 12234555555
Q ss_pred ccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 327 IFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 327 ~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..++.++. ...|.. . ....++|++++...++++++.+.++|+++
T Consensus 397 ~~Gi~v~~------~~~p~~-----~---------~~~~~lRisv~~~~t~edid~li~~L~~~ 440 (502)
T 3hbx_A 397 RYGWIVPA------YTMPPN-----A---------QHITVLRVVIREDFSRTLAERLVIDIEKV 440 (502)
T ss_dssp TTTCBCCE------EECCTT-----C---------TTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred hCCcEEee------ccCCcc-----c---------CCceEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 44443321 111100 0 01468999999998888888888877754
No 183
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.91 E-value=6.7e-24 Score=203.89 Aligned_cols=321 Identities=11% Similarity=-0.004 Sum_probs=184.9
Q ss_pred CCCCC-CCC--CCCCcc-CCeeeeCCCCCCCCCccc--cCCCCchHHHHHHHHHHHhCCC-cEEEecc-HHHHH-HHHHH
Q psy12791 22 DQWRS-QCV--IPPIIL-STTFKQNTPGQPPQGFEY--SRSNNPTRRNLERCIASLEEAK-HGLCYSS-GLGAV-TAVTH 92 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~~-~~~~~~~~~~~~~~~~~y--~~~~~~~~~~lr~~la~~~~~~-~~i~~~~-G~~al-~~~~~ 92 (393)
..++| +++ .+|++. ++.+.+++.+.+.....| ..++++...++++.++++++.+ +.+++++ |++++ .++..
T Consensus 29 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~ 108 (430)
T 3i4j_A 29 RRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKL 108 (430)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHH
T ss_pred CEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHH
Confidence 45678 665 678876 455555443322111112 2456678899999999999764 5566555 55567 65555
Q ss_pred hc--------CCCCeEEEcCCCccchHHHHHHhcccCCc---------------EEEeeCCC--------CHHHHHhhcC
Q psy12791 93 LL--------SAGDHIISGDDVYGGTYRYFAQVAPKIGL---------------EVDFVDLR--------KIENLIKYIK 141 (393)
Q Consensus 93 ~~--------~~gd~vl~~~~~y~~~~~~~~~~~~~~g~---------------~v~~~~~~--------d~~~l~~~l~ 141 (393)
+. ..+|.|++.+|+|++... .+...+. .+..++.+ |++++++.++
T Consensus 109 ~~~~~~~~g~~~~~~vi~~~~~yhg~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~ 184 (430)
T 3i4j_A 109 ARQYHVERGEPGRFKVITRVPSYHGASL----GSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLE 184 (430)
T ss_dssp HHHHHHHTTCTTCCEEEEETTC-----------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHH
T ss_pred HHHHHHhcCCCCCcEEEEEeCCcCCCCc----ccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHH
Confidence 44 347899999999986321 1111111 33334443 3477877775
Q ss_pred ----CCCcEEEEecCCC-CcccccC----HHHHHHHHHhCCCcEEEEeCccCccccc-CC-----C-CCcCcEEEEcccc
Q psy12791 142 ----PNTKMVWIENPTN-PLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQ-KS-----L-PWGVDIVLYSLTK 205 (393)
Q Consensus 142 ----~~~~~v~l~~p~n-ptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~-~~-----~-~~~~di~~~S~sK 205 (393)
+++++|+++.+|| ++|.+.+ +++|.++|+++ |+++|+||+|.++... .. . ....|++ ++||
T Consensus 185 ~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~--t~sK 261 (430)
T 3i4j_A 185 REGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEA-GIIFIADEVMSGMGRCGSPLALSRWSGVTPDIA--VLGK 261 (430)
T ss_dssp HHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEE--EECG
T ss_pred hcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHc-CCEEEEechhhCCCcccchhhhhhhcCCCCcEE--EEcc
Confidence 3456777777777 9998887 99999999999 9999999999864221 11 1 2224554 6889
Q ss_pred cccCCCC-ceEEEEEecChHHHHHHHHH----HHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHh----
Q psy12791 206 YMNGHSD-VVMGATVTNDDSLQARLKFL----QNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLE---- 274 (393)
Q Consensus 206 ~~~G~~G-~r~G~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~---- 274 (393)
.++ +| +|+||++++ +++++.+... ........++..+..+...++.+. ...++..++.+.+.+.|+
T Consensus 262 ~l~--~G~~r~G~~~~~-~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (430)
T 3i4j_A 262 GLA--AGYAPLAGLLAA-PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQA 338 (430)
T ss_dssp GGT--TTSSCCEEEEEC-HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc--CCccccEEEEEC-HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHH
Confidence 994 39 999999997 8888877653 111223445666555554443221 123444444444444443
Q ss_pred hCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC--------HHHHHHHHHhcCccccccccCCccccccCccc
Q psy12791 275 SHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG--------AEETRIFLESLLIFRCAESLGGIESLADLPAE 346 (393)
Q Consensus 275 ~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~ 346 (393)
.++.+..+ ++.+.++++.+.+. .+....+.+.+...++.+..+....
T Consensus 339 ~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~------- 393 (430)
T 3i4j_A 339 RFPQMMQV------------------RGTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAE------- 393 (430)
T ss_dssp HCTTEEEE------------------EEETTEEEEEEC------------CHHHHHHHHHHTTEECC-------------
T ss_pred hCCCeEEE------------------EEEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEeccccc-------
Confidence 44444322 12356788887421 1112445555544455544431100
Q ss_pred ccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 347 MTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 347 ~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.+..++++|+++++..++++++.+.++|+++
T Consensus 394 -------------~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~ 424 (430)
T 3i4j_A 394 -------------PNGRGDHLLLGPPLSITAAEVDGLLALLAGA 424 (430)
T ss_dssp ------------------CEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred -------------CCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 0122579999999888888777777777654
No 184
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.90 E-value=2.6e-23 Score=201.13 Aligned_cols=286 Identities=11% Similarity=0.051 Sum_probs=182.4
Q ss_pred hHHHHHHHHHHHhCCCcEEEeccHHH-H-H-HHHHHhcC--CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC---C
Q psy12791 60 TRRNLERCIASLEEAKHGLCYSSGLG-A-V-TAVTHLLS--AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL---R 131 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~~~i~~~~G~~-a-l-~~~~~~~~--~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~---~ 131 (393)
..+++++.+|+++|.+..+++++|++ + + .++..+.. +++.|++++++|.+ +...++..|++++.++. +
T Consensus 134 ~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s----~~~~~~~~G~~~~~v~~~~~~ 209 (456)
T 2z67_A 134 LTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKS----PIKAVSFVGMNMRLVETVLDG 209 (456)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHH----HHHHHHHTTCEEEEECCEEET
T ss_pred HHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHH----HHHHHHHcCCCceEEEEeccC
Confidence 34668999999999874366777766 3 3 34444333 67889999999985 45567778999998876 2
Q ss_pred -----CHHHHHhhc-C----CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccc-cCCC-----CCc
Q psy12791 132 -----KIENLIKYI-K----PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYY-QKSL-----PWG 195 (393)
Q Consensus 132 -----d~~~l~~~l-~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~-~~~~-----~~~ 195 (393)
|++++++++ + .++.+|++++||||||.+.|+++|.++|+++ |+++++|++|+.... ..+. ..+
T Consensus 210 ~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~-g~~v~vD~A~~~~~~g~~~~~~~~~~~~ 288 (456)
T 2z67_A 210 DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENY-DIPHIINGAYAIQNNYYLEKLKKAFKYR 288 (456)
T ss_dssp TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHH-TCCEEEECTTTTTCHHHHHHHHHHHTSC
T ss_pred CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHc-CCcEEEECcchHHHHHhhHHHHHhhCCC
Confidence 789999988 4 3677888899999999999999999999999 999999999886432 1111 116
Q ss_pred CcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCC-C-HHHHHHHHhcc--CCHHHHHHHHHHHHHHHHH
Q psy12791 196 VDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVP-S-PFDCWLVTRGL--KTLPCRLKEHERGSIEVAK 271 (393)
Q Consensus 196 ~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~ 271 (393)
.|+++.|+||++.|+. ++||++++++++.+.+.. ...+... . ....+.++..+ +.+....++..++++.+.+
T Consensus 289 ~D~~~~s~hK~~~~p~--g~G~l~~~~~~~~~~l~~--~~~g~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~ 364 (456)
T 2z67_A 289 VDAVVSSSDKNLLTPI--GGGLVYSTDAEFIKEISL--SYPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDE 364 (456)
T ss_dssp CSEEEEEHHHHHCCCS--SCEEEEESCHHHHHHHHT--TSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCcCCCC--CeEEEEEcCHHHHhhcCc--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999875554 499999965777776632 1222211 1 22222222222 2344456666777788888
Q ss_pred HHhhCC---CcceEeCCCCCCCcchHHHhhhcCCCcceEEEEE--cCC-HHHHHHHHHhcCccccccc--cCCccccccC
Q psy12791 272 FLESHP---CVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYV--NGG-AEETRIFLESLLIFRCAES--LGGIESLADL 343 (393)
Q Consensus 272 ~l~~~~---~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~l~~~~~~~~--~g~~~s~~~~ 343 (393)
.|++.+ ++. + .+. . ++++|.+ ++. .+-.+.+.+. ......+. .| .+.
T Consensus 365 ~L~~~~~~~g~~-v-~~~----------------~-~~v~~~~~~~~~~~~l~~~L~~~-gi~~~rv~~~~g-~f~---- 419 (456)
T 2z67_A 365 LLNDLSKKTGGK-F-LDV----------------E-SPIASCISVNSDPVEIAAKLYNL-RVTGPRGIKKTD-HFG---- 419 (456)
T ss_dssp HHHHHHHHSSCC-B-CCC----------------C-CSSEEEEECSSCHHHHHHHHHHT-TEESCEEECTTC-HHH----
T ss_pred HHHhcccccCCE-e-cCC----------------C-CeEEEEEecccHHHHHHHHHHHc-CCCcceEEeecC-ccc----
Confidence 887653 321 1 111 1 3455555 322 1222222221 11001110 00 000
Q ss_pred cccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 344 PAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+.. -...+++|+|++..+++++++.+.++|+++.
T Consensus 420 ---G~~~~---------~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 420 ---NCYLG---------TYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp ---HTCSS---------CCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred ---ccccc---------ccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 00000 0124799999999999999999999998754
No 185
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.90 E-value=8.8e-23 Score=195.10 Aligned_cols=285 Identities=14% Similarity=0.076 Sum_probs=175.9
Q ss_pred HHHHHHHHHhCCC-cEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHH-hcccCCcEEEeeCCC-----CHH
Q psy12791 63 NLERCIASLEEAK-HGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQ-VAPKIGLEVDFVDLR-----KIE 134 (393)
Q Consensus 63 ~lr~~la~~~~~~-~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~-~~~~~g~~v~~~~~~-----d~~ 134 (393)
.+++.+++++|.+ +.+++++|++++ .++..++++||+|++++|+|++....... .....+..++.++.+ |++
T Consensus 75 ~~~~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 154 (417)
T 3n0l_A 75 LAIERCKKLFNCKFANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYE 154 (417)
T ss_dssp HHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHH
T ss_pred HHHHHHHHHhCCCCcceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHH
Confidence 3455889999988 459999998778 77788899999999999999753221111 112244556666652 789
Q ss_pred HHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC---CCC-CcCcEEEEcccccccC
Q psy12791 135 NLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK---SLP-WGVDIVLYSLTKYMNG 209 (393)
Q Consensus 135 ~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~---~~~-~~~di~~~S~sK~~~G 209 (393)
++++.+. +++++|++++|+| |.+.|+++|.++|+++ |+++|+|++|..+.... +.. ...|+++.|+||+++
T Consensus 155 ~l~~~i~~~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~-~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~- 230 (417)
T 3n0l_A 155 KVREIAKKEKPKLIVCGASAY--ARVIDFAKFREIADEI-GAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLR- 230 (417)
T ss_dssp HHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHH-TCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTC-
T ss_pred HHHHHHHhcCCeEEEECCccc--CccCCHHHHHHHHHHc-CCEEEEECccchhhhhcccCCCccccceEEEeeCccccC-
Confidence 9999987 5899999888886 8899999999999999 99999999976543211 111 146899999999884
Q ss_pred CCCceEEEEEecChHHHHHHHHHHHhcC-CCCCHHHHHH---HHhc-c-CCHHHHHHHHHHHHHHHHHHHhhCCCcceEe
Q psy12791 210 HSDVVMGATVTNDDSLQARLKFLQNSMG-VVPSPFDCWL---VTRG-L-KTLPCRLKEHERGSIEVAKFLESHPCVKGVL 283 (393)
Q Consensus 210 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~-~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~ 283 (393)
|.|+||++++++++.+.++....... .......... +... . +.+...+++..++++.+.+.|++ .++. +.
T Consensus 231 --g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~-~~ 306 (417)
T 3n0l_A 231 --GPRGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKFK-LV 306 (417)
T ss_dssp --SCSCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTCE-EG
T ss_pred --CCCeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCce-ec
Confidence 34689999986788888766544221 2222322211 1111 1 23455666777777888888876 3332 11
Q ss_pred CCCCCCCcchHHHhhhcCCCcceEEEEEcC---CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhc
Q psy12791 284 HPGLPSHPNHELAKSQWSGTSGMLSFYVNG---GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDAL 360 (393)
Q Consensus 284 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~ 360 (393)
+. ...+.++++.+.+ +.+....++.. .++.+..+........+
T Consensus 307 -~~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~~---~gi~v~~~~~~~~~~~~---------------- 352 (417)
T 3n0l_A 307 -SD--------------GTDNHLVLMSFLDREFSGKDADLALGN---AGITANKNTVPGEIRSP---------------- 352 (417)
T ss_dssp -GG--------------SCSSSEEEEECTTSSSCHHHHHHHHHH---TTEECEECCCTTCCSCT----------------
T ss_pred -cC--------------CCCceEEEEEcccCCCCHHHHHHHHHH---cCeEEeccccCCCCccc----------------
Confidence 10 1124577887742 34444444443 34444332211000000
Q ss_pred CCCCCeEEEEecCCC----hHHHHHHHHHHHHHh
Q psy12791 361 GITDNLVRLSVGVEG----YTDLIADLDQALRKA 390 (393)
Q Consensus 361 g~~~~~iRls~~~~~----~~~~i~~l~~al~~~ 390 (393)
.....+|+++...+ ++++++.+.++|+++
T Consensus 353 -~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~ 385 (417)
T 3n0l_A 353 -FITSGLRLGTPALTARGFKEKEMEIVSNYIADI 385 (417)
T ss_dssp -TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred -CCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHH
Confidence 12467999986433 366677777776654
No 186
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.90 E-value=1.2e-23 Score=204.60 Aligned_cols=284 Identities=15% Similarity=0.095 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHhCCCcEEEe-ccHHHHH-HHHHHh----cCCCC-----eEEEcCCCccchHHHHHHhcccCCcEEEeeC
Q psy12791 61 RRNLERCIASLEEAKHGLCY-SSGLGAV-TAVTHL----LSAGD-----HIISGDDVYGGTYRYFAQVAPKIGLEVDFVD 129 (393)
Q Consensus 61 ~~~lr~~la~~~~~~~~i~~-~~G~~al-~~~~~~----~~~gd-----~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~ 129 (393)
..++++.+++++|.+..+++ ++|++++ .++..+ .++|| +|+++.++|++ +...++..|++++.++
T Consensus 109 ~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~----~~~~~~~~G~~vv~v~ 184 (474)
T 1wyu_B 109 MWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGS----NPATASMAGYQVREIP 184 (474)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTH----HHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChh----hHHHHHHCCCEEEEec
Confidence 56788888889998866655 5556666 434332 35787 99999999985 4556778899999998
Q ss_pred CC-----CHHHHHhhcCCCCcEEEEecCCCCcccc-cCHHHHHHHHHhCCCcEEEEeCccCccccc--CCCCCcCcEEEE
Q psy12791 130 LR-----KIENLIKYIKPNTKMVWIENPTNPLMTV-FDVKAISAVVKQHPDILLVLDNTFLTAYYQ--KSLPWGVDIVLY 201 (393)
Q Consensus 130 ~~-----d~~~l~~~l~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~livDea~~~~~~~--~~~~~~~di~~~ 201 (393)
.+ |++++++++++++++|++++| ||||.+ .++++|.++|+++ |+++|+|++|+.+... .+...+.|+++.
T Consensus 185 ~~~~~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~-g~~li~Dea~~~~~~g~~~~~~~g~di~~~ 262 (474)
T 1wyu_B 185 SGPEGEVDLEALKRELGPHVAALMLTNP-NTLGLFERRILEISRLCKEA-GVQLYYDGANLNAIMGWARPGDMGFDVVHL 262 (474)
T ss_dssp BCTTSSBCHHHHHHHCSTTEEEEEECSS-CTTSCCCTTHHHHHHHHHHH-TCEEEEEGGGGGGTTTTCCHHHHTCSEEEC
T ss_pred CCCCCCcCHHHHHHhhCCCceEEEEECC-CCCcccCCCHHHHHHHHHHc-CCEEEEeCchhhhhccCCCcccCCCcEEEE
Confidence 85 899999999988999999998 589998 5899999999999 9999999999765531 111246899999
Q ss_pred cccccccCC---CCceEEEEEecChHHHHHHHH-HH------------------HhcCCCCCHHHHHHHHhcc-----CC
Q psy12791 202 SLTKYMNGH---SDVVMGATVTNDDSLQARLKF-LQ------------------NSMGVVPSPFDCWLVTRGL-----KT 254 (393)
Q Consensus 202 S~sK~~~G~---~G~r~G~~~~~~~~~~~~~~~-~~------------------~~~~~~~~~~~~~~~~~~~-----~~ 254 (393)
|+||+++++ .|.|+||++++ +++++.+.. .. .......+...+..+...+ +.
T Consensus 263 s~~K~~~~p~g~gG~~~G~~~~~-~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~ 341 (474)
T 1wyu_B 263 NLHKTFTVPHGGGGPGSGPVGVK-AHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEG 341 (474)
T ss_dssp CTTTTTCCCCTTSCCCCCCEEEC-GGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHH
T ss_pred eCccccccCCCCCCCCeEEEEEc-HHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHH
Confidence 999999633 24689999998 566554431 00 0000112333333222222 22
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcccccccc
Q psy12791 255 LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESL 334 (393)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 334 (393)
+....++..++++.+.+.|++. ++. +..+. .....+++.+. .......+.+.|...++.+ .
T Consensus 342 l~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~---------------~~~~~~~~~~~-~~~~~~~l~~~L~~~Gi~~-~ 402 (474)
T 1wyu_B 342 LKKAAALAVLNARYLKELLKEK-GYR-VPYDG---------------PSMHEFVAQPP-EGFRALDLAKGLLELGFHP-P 402 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCB-CSSCS---------------SCCSCEEEBCS-TTCCHHHHHHHHHHTTCCC-C
T ss_pred HHHHHHHHHHHHHHHHHHHhhc-CcE-ecCCC---------------CcceEEEEEcC-CCCCHHHHHHHHHHCCccc-c
Confidence 4444666677788888888765 332 11111 00011333332 1112233444333223321 1
Q ss_pred CCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 335 GGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 335 g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+..+ + ...++++|++++..+++++++.+.++|+++.
T Consensus 403 ~~~~-----~----------------~~~~~~lRis~~~~~t~e~id~~~~~L~~~~ 438 (474)
T 1wyu_B 403 TVYF-----P----------------LIVKEALMVEPTETEAKETLEAFAEAMGALL 438 (474)
T ss_dssp EESC-----S----------------TTSTTCEEECCCTTSCHHHHHHHHHHHHHHH
T ss_pred cccc-----c----------------cccCCEEEEEeecCCCHHHHHHHHHHHHHHH
Confidence 1000 0 0115789999999888999999999988764
No 187
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.90 E-value=4.3e-23 Score=198.86 Aligned_cols=155 Identities=14% Similarity=0.180 Sum_probs=120.0
Q ss_pred CCCchHHHHHHHHHHHhCCCcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC--C
Q psy12791 56 SNNPTRRNLERCIASLEEAKHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL--R 131 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~--~ 131 (393)
++.+...++++.+|+ +|.++++++++|+++ + .++.+++++||+|++++++|.+. ...+...|+++++++. +
T Consensus 54 ~~~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~----~~~~~~~G~~~~~v~~~~~ 128 (446)
T 2x3l_A 54 HPEEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSV----LHALDISQQEGHFIETHQS 128 (446)
T ss_dssp SCSSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHH----HHHHHHHTCCEEECEEEEC
T ss_pred CcchHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHH----HHHHHHcCCeEEEEeCeec
Confidence 456788999999999 998888899999765 7 77777889999999999999864 3445567888888776 3
Q ss_pred ---------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccc-ccC-CC---CCcCc
Q psy12791 132 ---------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAY-YQK-SL---PWGVD 197 (393)
Q Consensus 132 ---------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~-~~~-~~---~~~~d 197 (393)
|++++ +.+++++|++++| |++|.+.|+++|.++|+++ |+++++||+|+... +.. +. ..+.|
T Consensus 129 ~~~~~~~~~d~~~l---~~~~~~~v~~~~~-n~~G~~~~l~~I~~l~~~~-~~~livDea~~~~~~f~~~~~~~~~~g~D 203 (446)
T 2x3l_A 129 PLTNHYNKVNLSRL---NNDGHKLVVLTYP-NYYGETFNVEEVIKSLHQL-NIPVLIDEAHGAHFGLQGFPDSTLNYQAD 203 (446)
T ss_dssp TTTSSEEEEEC----------CCEEEEESS-CTTSCCCCHHHHHHHHHHT-TCCEEEECTTCTTTTSTTSCCCGGGGTCS
T ss_pred cccCcCCCCCHHHH---cCCCceEEEEECC-CCCeEecCHHHHHHHHHhc-CCeEEEcchhhhhhccCCCCCChHHcCCC
Confidence 34555 4567999999995 5599999999999999999 99999999998622 111 22 24689
Q ss_pred EEEEcccccccCCCCceEEEEEecC
Q psy12791 198 IVLYSLTKYMNGHSDVVMGATVTND 222 (393)
Q Consensus 198 i~~~S~sK~~~G~~G~r~G~~~~~~ 222 (393)
+++.|+||+++|+.| +||+++++
T Consensus 204 i~~~S~~K~l~~~~g--~g~l~~~~ 226 (446)
T 2x3l_A 204 YVVQSFHKTLPALTM--GSVLYIHK 226 (446)
T ss_dssp EEEECHHHHSSSCTT--CEEEEEET
T ss_pred EEEECCccccccccc--cEEEEEcC
Confidence 999999997766766 89999974
No 188
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.90 E-value=2.1e-22 Score=192.64 Aligned_cols=284 Identities=12% Similarity=0.076 Sum_probs=172.8
Q ss_pred HHHHHHHHHHhCCC-cEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCC-----CC
Q psy12791 62 RNLERCIASLEEAK-HGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDL-----RK 132 (393)
Q Consensus 62 ~~lr~~la~~~~~~-~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~-----~d 132 (393)
+.+++.+++++|.+ +.+++++|++++ .++.+++++||+|+++.|+|+++.... ......| ...+.++. .|
T Consensus 79 ~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~d 157 (420)
T 3gbx_A 79 QLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHG-SPVNFSGKLYNIVPYGIDESGKID 157 (420)
T ss_dssp HHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC-------------CHHHHSEEEEEEECTTCSCC
T ss_pred HHHHHHHHHHhCCCCceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccc-hhhhhcccceeEEeccCCccCCcC
Confidence 34567889999987 457789998887 777888999999999999997632111 1112222 34444432 28
Q ss_pred HHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-----CCCCCcCcEEEEccccc
Q psy12791 133 IENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ-----KSLPWGVDIVLYSLTKY 206 (393)
Q Consensus 133 ~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~-----~~~~~~~di~~~S~sK~ 206 (393)
++++++++.+ ++++|++++|+||+ ..++++|.++|+++ |+++|+||+|..+... ... ...|++++|+||+
T Consensus 158 ~~~l~~~i~~~~~~~v~~~~~~~~~--~~~l~~l~~l~~~~-~~~li~De~~~~~~~~~~~~~~~~-~~~di~~~s~sK~ 233 (420)
T 3gbx_A 158 YDEMAKLAKEHKPKMIIGGFSAYSG--VVDWAKMREIADSI-GAYLFVDMAHVAGLIAAGVYPNPV-PHAHVVTTTTHKT 233 (420)
T ss_dssp HHHHHHHHHHHCCSEEEECCTTCCS--CCCHHHHHHHHHHT-TCEEEEECTTTHHHHHTTSSCCST-TTSSEEEEESSGG
T ss_pred HHHHHHHHHhcCCeEEEEecCccCC--ccCHHHHHHHHHHc-CCEEEEECCcchhceecccCCccc-ccCCEEEeecccC
Confidence 9999999876 59999999999874 78899999999999 9999999998764431 122 2478999999999
Q ss_pred ccCCCCceEEEEEecC--hHHHHHHHHHHHhc--CCCCCHHHHHH--HH-hcc-CCHHHHHHHHHHHHHHHHHHHhhCCC
Q psy12791 207 MNGHSDVVMGATVTND--DSLQARLKFLQNSM--GVVPSPFDCWL--VT-RGL-KTLPCRLKEHERGSIEVAKFLESHPC 278 (393)
Q Consensus 207 ~~G~~G~r~G~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~--~~-~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (393)
++|+ ++||+++++ +++.+.++...... +....+..+.. +. ... +.+...+++..++.+.+.+.|++. +
T Consensus 234 ~~g~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g 309 (420)
T 3gbx_A 234 LAGP---RGGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-G 309 (420)
T ss_dssp GCSC---SCEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred CCCC---CceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 9544 469999984 27777765443322 22222222121 21 222 234556777778888888888762 2
Q ss_pred cceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC---CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChh
Q psy12791 279 VKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG---GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKE 355 (393)
Q Consensus 279 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~ 355 (393)
+. +..+ ...+.++++.+.+ +.+.....+. ..++.+..++.......+
T Consensus 310 ~~-~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~---~~gi~v~~~~~~~~~~~~----------- 359 (420)
T 3gbx_A 310 YK-VVSG---------------GTENHLFLLDLVDKNLTGKEADAALG---RANITVNKNSVPNDPKSP----------- 359 (420)
T ss_dssp CE-EGGG---------------SCSSSEEEEECGGGTCCHHHHHHHHH---HTTEECEEECCTTCSSCT-----------
T ss_pred Ce-eccC---------------CCCCeEEEEEcCCCCCCHHHHHHHHH---HCCcEeccccCCCCcccc-----------
Confidence 22 1111 1124678887742 2333333333 334443331110000000
Q ss_pred hHhhcCCCCCeEEEEecCCCh----HHHHHHHHHHHHHh
Q psy12791 356 TRDALGITDNLVRLSVGVEGY----TDLIADLDQALRKA 390 (393)
Q Consensus 356 ~~~~~g~~~~~iRls~~~~~~----~~~i~~l~~al~~~ 390 (393)
..+..+|++++..++ +++++.+.++|+++
T Consensus 360 ------~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~ 392 (420)
T 3gbx_A 360 ------FVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDV 392 (420)
T ss_dssp ------TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ------CCCcceEEecchhcccCCCHHHHHHHHHHHHHH
Confidence 113559999976543 67777777777654
No 189
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.89 E-value=2.6e-22 Score=194.81 Aligned_cols=295 Identities=15% Similarity=0.049 Sum_probs=183.2
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcC----CCCe---EEEcCCCccchHHHHHHhcccCCcEEEeeC
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLS----AGDH---IISGDDVYGGTYRYFAQVAPKIGLEVDFVD 129 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~----~gd~---vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~ 129 (393)
.+...+||+++|++++.++.+++++|++++ .++..++. +||+ |+++.+.|.. +...+...|.+++.++
T Consensus 75 ~~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~----~~~~~~~~g~~~~~~~ 150 (467)
T 1ax4_A 75 SRNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDT----TAAHVELNGCKAINIV 150 (467)
T ss_dssp CHHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHH----HHHHHHHTTCEEEECB
T ss_pred CccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccch----hhHHHhccCCceeccc
Confidence 567899999999999987777777788887 77777777 9998 9888555543 3445566788877543
Q ss_pred C---------------CCHHHHHhhcCC----CCcEEEEecCCCCc-ccccC---HHHHHHHHHhCCCcEEEEeCccCc-
Q psy12791 130 L---------------RKIENLIKYIKP----NTKMVWIENPTNPL-MTVFD---VKAISAVVKQHPDILLVLDNTFLT- 185 (393)
Q Consensus 130 ~---------------~d~~~l~~~l~~----~~~~v~l~~p~npt-G~~~~---~~~l~~l~~~~~~~~livDea~~~- 185 (393)
. .|++++++++++ ++++|++++|+||| |.+++ +++|.++|++| |++||+|+++..
T Consensus 151 ~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~-gi~li~De~~~~~ 229 (467)
T 1ax4_A 151 TEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQH-GIFVVMDSARFCE 229 (467)
T ss_dssp CGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHH-TCCEEEECTTHHH
T ss_pred ccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHc-CCEEEEEchhhhh
Confidence 1 178999988863 68999999999999 88876 67899999999 999999998654
Q ss_pred cc--------ccCCCC---------CcCcEEEEcccccccCCCCceEEEEEecCh-HHHHHHHHHHHhcCC-----CCCH
Q psy12791 186 AY--------YQKSLP---------WGVDIVLYSLTKYMNGHSDVVMGATVTNDD-SLQARLKFLQNSMGV-----VPSP 242 (393)
Q Consensus 186 ~~--------~~~~~~---------~~~di~~~S~sK~~~G~~G~r~G~~~~~~~-~~~~~~~~~~~~~~~-----~~~~ 242 (393)
+. ...+.. ...|+++.|+||++ |++ .+|+++++++ ++.+.+......++. ..+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~-g~~--~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (467)
T 1ax4_A 230 NAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDP-LLN--IGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAG 306 (467)
T ss_dssp HHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTT-CCS--SCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCH
T ss_pred cchhccccccccCCCchhhhhhhhccccceEEEeccccC-CCC--cceEEEeCCHHHHHHHHHhhccccccccccCCccc
Confidence 11 111111 13678889999999 565 1477777656 888877654432211 1121
Q ss_pred HHHH-H--HHhccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEE-------Ec
Q psy12791 243 FDCW-L--VTRGLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFY-------VN 312 (393)
Q Consensus 243 ~~~~-~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~ 312 (393)
.... + .+..... ...+++..++.+.+.+.|++ +++. +..|. .+.++++. +.
T Consensus 307 ~~~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~-~~~~-~~~~~----------------~~~~~~~~~~~~~~~~~ 367 (467)
T 1ax4_A 307 RDMAAMVQGLEEGTE-EEYLHYRIGQVKYLGDRLRE-AGIP-IQYPT----------------GGHAVFVDCKKLVPQIP 367 (467)
T ss_dssp HHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHH-TTCC-BCSSC----------------CSSEEEEESTTTCTTSC
T ss_pred hHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHh-CCCC-cccCC----------------CceEEEEehhhhccccc
Confidence 1111 1 1222222 12344445666778888876 3332 11121 13456766 32
Q ss_pred CCHHHHHHHHHhc-Ccccccccc-CCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC-ChHHHHHHHHHHHHH
Q psy12791 313 GGAEETRIFLESL-LIFRCAESL-GGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE-GYTDLIADLDQALRK 389 (393)
Q Consensus 313 ~~~~~~~~~~~~l-~~~~~~~~~-g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~-~~~~~i~~l~~al~~ 389 (393)
+.......+.+.| ...++.+.. |..+. ...+.. .. ......+++|||++.. .++++++.+.++|++
T Consensus 368 ~~~~~~~~l~~~L~~~~gv~v~~~g~~~~-~~~~~~----g~------~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~ 436 (467)
T 1ax4_A 368 GDQFPAQAVINALYLESGVRAVEIGSFLL-GRDPAT----GE------QKHADMEFMRLTIARRVYTNDHMDYIADALIG 436 (467)
T ss_dssp GGGCHHHHHHHHHHHHHCEECEEESHHHH-CBCTTT----CS------BCCCSCCEEEEECCTTSSCHHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHhcCceeeecCcccc-cccccc----cc------ccccccceEEEecccccCCHHHHHHHHHHHHH
Confidence 1111345566666 555666655 32210 000000 00 0001147999999954 778888888888775
Q ss_pred h
Q psy12791 390 A 390 (393)
Q Consensus 390 ~ 390 (393)
+
T Consensus 437 ~ 437 (467)
T 1ax4_A 437 L 437 (467)
T ss_dssp T
T ss_pred H
Confidence 4
No 190
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.89 E-value=4.4e-23 Score=199.34 Aligned_cols=320 Identities=14% Similarity=0.093 Sum_probs=192.3
Q ss_pred CCCC-CCCC--CCCcc-CCeeeeCCCCCCCCCc--cccCCCCchHHHHHHHHHHHhCCC-cEEEe-ccHHHHH-HHHHHh
Q psy12791 23 QWRS-QCVI--PPIIL-STTFKQNTPGQPPQGF--EYSRSNNPTRRNLERCIASLEEAK-HGLCY-SSGLGAV-TAVTHL 93 (393)
Q Consensus 23 ~~~~-~~~~--~p~~~-~~~~~~~~~~~~~~~~--~y~~~~~~~~~~lr~~la~~~~~~-~~i~~-~~G~~al-~~~~~~ 93 (393)
.++| +++. ++++. ++.+.+++.+.+.... .+..++.+...++++.++++++.. +.+++ ++|++++ .++..+
T Consensus 51 ~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~ 130 (449)
T 3a8u_X 51 KVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMV 130 (449)
T ss_dssp EEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHH
T ss_pred EEEECCccHhhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHH
Confidence 3556 4443 56655 3555554433322221 122456677889999999998754 45555 5556667 555544
Q ss_pred cC--------CCCeEEEcCCCccchHHHHHHhcc-----------cCCcEEEeeCC--------CC--------HHHHHh
Q psy12791 94 LS--------AGDHIISGDDVYGGTYRYFAQVAP-----------KIGLEVDFVDL--------RK--------IENLIK 138 (393)
Q Consensus 94 ~~--------~gd~vl~~~~~y~~~~~~~~~~~~-----------~~g~~v~~~~~--------~d--------~~~l~~ 138 (393)
.. ++|+|++.+|+|++.......... ..|+..+.++. .| ++++++
T Consensus 131 ~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~ 210 (449)
T 3a8u_X 131 RAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLK 210 (449)
T ss_dssp HHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHH
Confidence 42 679999999999874322211111 12344444442 04 888888
Q ss_pred hcC----CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccc-ccCCC-----CCcCcEEEEccc
Q psy12791 139 YIK----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAY-YQKSL-----PWGVDIVLYSLT 204 (393)
Q Consensus 139 ~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~-~~~~~-----~~~~di~~~S~s 204 (393)
.+. +++++|+++..+|+||.+++ +++|.++|+++ |++||+||+|..+. ..... ....|++ |+|
T Consensus 211 ~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~-~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~s 287 (449)
T 3a8u_X 211 LIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQH-NILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIA 287 (449)
T ss_dssp HHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EEC
T ss_pred HHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHh-CCEEEEeccccCccccCcchhhhhcCCCCCEE--EEc
Confidence 886 35667766665678999888 99999999999 99999999996432 11111 1235665 888
Q ss_pred ccccCCCC-ceEEEEEecChHHHHHHHHHH---------HhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHH
Q psy12791 205 KYMNGHSD-VVMGATVTNDDSLQARLKFLQ---------NSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKF 272 (393)
Q Consensus 205 K~~~G~~G-~r~G~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~ 272 (393)
|+++ . | +|+||++++ +++++.+.... .......++..+..+...++.+. ...++..++...+.+.
T Consensus 288 K~l~-~-G~~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~ 364 (449)
T 3a8u_X 288 KQVT-N-GAIPMGAVIAS-TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKA 364 (449)
T ss_dssp GGGG-T-TSSCCEEEEEE-HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred cccc-C-CCCceEEEEEC-HHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 9994 3 7 899999997 78887775421 01112335655555554444322 2445556666777777
Q ss_pred HhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH--H--HHHHHHHhcCccccccccCCccccccCccccc
Q psy12791 273 LESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA--E--ETRIFLESLLIFRCAESLGGIESLADLPAEMT 348 (393)
Q Consensus 273 l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~ 348 (393)
|++++....+. ..++.+.++++.+.+.. . ....+.+.+...++.+..+
T Consensus 365 L~~l~~~~~~~---------------~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~------------- 416 (449)
T 3a8u_X 365 LHGIKGAKNVI---------------DIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFG------------- 416 (449)
T ss_dssp HHTTTTSTTEE---------------EEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEE-------------
T ss_pred HHHHhcCCCeE---------------EEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecC-------------
Confidence 76532111010 01123578899985321 1 1123444443334333221
Q ss_pred CCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 349 HKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 349 ~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+++||+++...++++++.+.++|+++.
T Consensus 417 ---------------g~~iRis~~~~~t~~~i~~~l~~l~~~l 444 (449)
T 3a8u_X 417 ---------------GDTLQFGPTFNSKPQDLDRLFDAVGEVL 444 (449)
T ss_dssp ---------------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred ---------------CCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 2689999998888888888888887653
No 191
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.89 E-value=1.2e-22 Score=197.68 Aligned_cols=280 Identities=11% Similarity=0.077 Sum_probs=182.0
Q ss_pred HHHHHHHHHHhCCCc-----EEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHH----HhcccCC--cEEEeeC
Q psy12791 62 RNLERCIASLEEAKH-----GLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFA----QVAPKIG--LEVDFVD 129 (393)
Q Consensus 62 ~~lr~~la~~~~~~~-----~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~----~~~~~~g--~~v~~~~ 129 (393)
+.+++.+++++|.+. +|++++|++++ .++.++++|||+|++++++|+++..... ..+...| .+++.++
T Consensus 93 ~~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~ 172 (483)
T 1rv3_A 93 TLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYK 172 (483)
T ss_dssp HHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEEC
T ss_pred HHHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECc
Confidence 345588999999872 49999999776 6678889999999999999986421110 1122233 4555553
Q ss_pred CC------CHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-----CCCCCcCc
Q psy12791 130 LR------KIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ-----KSLPWGVD 197 (393)
Q Consensus 130 ~~------d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~-----~~~~~~~d 197 (393)
.+ |++++++.+. +++++|++ +++|++ .+.|+++|.++|+++ |+++++|++|..+... .++. ++|
T Consensus 173 ~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~-g~~livD~ah~~g~~~~~~~~~p~~-~~d 248 (483)
T 1rv3_A 173 VNPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADEN-GAYLMADMAHISGLVVAGVVPSPFE-HCH 248 (483)
T ss_dssp BCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHT-TCEEEEECTTTHHHHHHTSSCCGGG-TCS
T ss_pred cccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHc-CCEEEEEccchhcccccCCCCCCCC-CCc
Confidence 22 7899999997 78999999 999998 899999999999999 9999999998854321 1221 679
Q ss_pred EEEEcccccccCCCCceEEEEEecCh--------------HHHHHHHHHHH-hcCCCCCHHHH-H--HHHhccC--CHHH
Q psy12791 198 IVLYSLTKYMNGHSDVVMGATVTNDD--------------SLQARLKFLQN-SMGVVPSPFDC-W--LVTRGLK--TLPC 257 (393)
Q Consensus 198 i~~~S~sK~~~G~~G~r~G~~~~~~~--------------~~~~~~~~~~~-~~~~~~~~~~~-~--~~~~~~~--~~~~ 257 (393)
+++.|+||++.|+ |+||++++++ ++.+.+..... ...+.+..... . .+..... .+..
T Consensus 249 iv~~s~~K~l~Gp---rgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~ 325 (483)
T 1rv3_A 249 VVTTTTHKTLRGC---RAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKE 325 (483)
T ss_dssp EEEEESSGGGCCC---SCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHH
T ss_pred EEEecCcccCCCC---CceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHH
Confidence 9999999998544 6799999853 24444433221 11122222221 1 1222222 3455
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc--C-CHHHHHHHHHhcCccccccc-
Q psy12791 258 RLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN--G-GAEETRIFLESLLIFRCAES- 333 (393)
Q Consensus 258 ~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~l~~~~~~~~- 333 (393)
..++..++++.+.+.|.+. ++. +..++ . ...++++.+. + +.++...+++. .++.++
T Consensus 326 ~~~~~~~~~~~l~~~L~~~-g~~-~~~~~--------------~-~~~~~~v~~~~~g~~~~~~~~~L~~---~gI~v~~ 385 (483)
T 1rv3_A 326 YQRQVVANCRALSAALVEL-GYK-IVTGG--------------S-DNHLILVDLRSKGTDGGRAEKVLEA---CSIACNK 385 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCE-EGGGS--------------C-SSSEEEEEGGGGTCCHHHHHHHHHH---TTEECEE
T ss_pred HHHHHHHHHHHHHHHHHhc-CCE-eccCC--------------C-CCceEEEeccCCCCCHHHHHHHHHh---CCcEEec
Confidence 6777788889999999876 432 22121 0 1235566663 2 34455555544 344443
Q ss_pred ---cCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCCh----HHHHHHHHHHHHHh
Q psy12791 334 ---LGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGY----TDLIADLDQALRKA 390 (393)
Q Consensus 334 ---~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~----~~~i~~l~~al~~~ 390 (393)
+|..+ + ..++.+|||++..++ +++++.+.++|.++
T Consensus 386 ~~~pg~~~-----~-----------------~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~ 427 (483)
T 1rv3_A 386 NTCPGDKS-----A-----------------LRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRG 427 (483)
T ss_dssp ECCSSCSC-----T-----------------TSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCc-----C-----------------CCCceEEeecCCcccCCCCHHHHHHHHHHHHHH
Confidence 33210 0 125799999998877 88888888887754
No 192
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.89 E-value=6.3e-23 Score=197.33 Aligned_cols=244 Identities=14% Similarity=0.122 Sum_probs=153.4
Q ss_pred CCCCC-CCCC--CCCcc-CCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHHH-HHHHHhc-
Q psy12791 22 DQWRS-QCVI--PPIIL-STTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGAV-TAVTHLL- 94 (393)
Q Consensus 22 ~~~~~-~~~~--~p~~~-~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~al-~~~~~~~- 94 (393)
.+++| +++. ++++. ++.+.+++.+++.....+ .|+++...+|+++++++++.. +.+++++|++++ .++..+.
T Consensus 55 ~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~ 133 (434)
T 3l44_A 55 NKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLY-GTPTALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARA 133 (434)
T ss_dssp CEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCC-SSCCHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCC-CCCCHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHH
Confidence 35677 5543 67764 455555544332211112 356788899999999998634 455556677777 5555443
Q ss_pred -CCCCeEEEcCCCccchHHHHHHhcccCC-------------------cEEEeeCCCCHHHHHhhcC---CCCcEEEEec
Q psy12791 95 -SAGDHIISGDDVYGGTYRYFAQVAPKIG-------------------LEVDFVDLRKIENLIKYIK---PNTKMVWIEN 151 (393)
Q Consensus 95 -~~gd~vl~~~~~y~~~~~~~~~~~~~~g-------------------~~v~~~~~~d~~~l~~~l~---~~~~~v~l~~ 151 (393)
.++++|++.+++|++.. .......| .++..++.+|++++++.+. +++++|+++.
T Consensus 134 ~~~~~~vi~~~~~yhg~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 210 (434)
T 3l44_A 134 YTGRTKIMKFAGCYHGHS---DLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEP 210 (434)
T ss_dssp HHCCCEEEEETTCCCCSS---GGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred hhCCCEEEEEcCccCCCc---HHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcC
Confidence 36789999999997632 11111111 1456667778999998886 4567777777
Q ss_pred CCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccccCCC-----CCcCcEEEEcccccccCCCCceEEEEEecC
Q psy12791 152 PTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQKSL-----PWGVDIVLYSLTKYMNGHSDVVMGATVTND 222 (393)
Q Consensus 152 p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~~~~-----~~~~di~~~S~sK~~~G~~G~r~G~~~~~~ 222 (393)
++|++|.+.+ +++|.++|++| |++||+||+|.++...... ....|+ .|+||.+ | +|+|+||++++
T Consensus 211 ~~~~~G~~~~~~~~l~~l~~l~~~~-~illI~DEv~~g~~~g~~~~~~~~~~~~di--~t~sK~~-~-~G~~iG~~~~~- 284 (434)
T 3l44_A 211 IVGNFGIVEPKPGFLEKVNELVHEA-GALVIYDEVITAFRFMYGGAQDLLGVTPDL--TALGKVI-G-GGLPIGAYGGK- 284 (434)
T ss_dssp SBCTTSCBCCCTTHHHHHHHHHHTT-TCEEEEECTTTTTTSSSSCHHHHHTCCCSE--EEEEGGG-G-TTSSCEEEEEC-
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccceeccccHHHHHcCCCCCe--eehhhhh-c-CCcCeeeEEEc-
Confidence 7888888887 99999999999 9999999999865111111 123454 4788999 5 68999999987
Q ss_pred hHHHHHHHHHH---HhcCCCCCHHHHHHHHhccCCH--HHHHHHHHHHHHHHHHHHhh
Q psy12791 223 DSLQARLKFLQ---NSMGVVPSPFDCWLVTRGLKTL--PCRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 223 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~ 275 (393)
+++++.+.... .......++..+..+...++.+ +...++..++.+.+.+.|++
T Consensus 285 ~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 342 (434)
T 3l44_A 285 KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILE 342 (434)
T ss_dssp HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 88877664311 1112234555555444433211 22344555555555555543
No 193
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.89 E-value=7.9e-21 Score=191.50 Aligned_cols=216 Identities=13% Similarity=0.069 Sum_probs=155.3
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHh-cccCCcEEEeeCCC--
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQV-APKIGLEVDFVDLR-- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~-~~~~g~~v~~~~~~-- 131 (393)
+++...++++.+|+++|.+..+++++|+++ + .++.+++++||+|+++.++|.+.+ .. ++..|+++++++..
T Consensus 171 ~~~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~----~~~~~l~Ga~~v~v~~~~~ 246 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVY----NSALAMAGGRPVYLQTNRN 246 (730)
T ss_dssp TBTHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHH----HHHTTTTCCEEEEECEEEC
T ss_pred ChHHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHH----HHHHHHCCCEEEEEeCCcc
Confidence 456788999999999999988999999865 6 777888999999999999998633 33 67789998887641
Q ss_pred --------CHHHH-----HhhcCCC------C----cEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccc
Q psy12791 132 --------KIENL-----IKYIKPN------T----KMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYY 188 (393)
Q Consensus 132 --------d~~~l-----~~~l~~~------~----~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~ 188 (393)
|++++ ++++.++ + ++|++++| ||+|.+.|+++|.++|+++ ++++++||+|+....
T Consensus 247 ~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~-g~~livDeAh~~~~~ 324 (730)
T 1c4k_A 247 PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHL-CDYIEFDSAWVGYEQ 324 (730)
T ss_dssp TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGG-BSEEEEECTTCCGGG
T ss_pred ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHc-CCeEEEEcccccccc
Confidence 66667 8888765 5 89999999 5899999999999999999 999999999975321
Q ss_pred -------cCCCCC---cCc----EEEEcccccccCCCCceEEEEEecChHH--------HHHHHHHHHhc-CCCCCHHHH
Q psy12791 189 -------QKSLPW---GVD----IVLYSLTKYMNGHSDVVMGATVTNDDSL--------QARLKFLQNSM-GVVPSPFDC 245 (393)
Q Consensus 189 -------~~~~~~---~~d----i~~~S~sK~~~G~~G~r~G~~~~~~~~~--------~~~~~~~~~~~-~~~~~~~~~ 245 (393)
..++.. +.| +++.|+||+++|+.+ +|+++.+++.+ ..+++...... ...++....
T Consensus 325 f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~--gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~i 402 (730)
T 1c4k_A 325 FIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQ--TSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMY 402 (730)
T ss_dssp SSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTT--CEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHH
T ss_pred cCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCC--EEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHH
Confidence 122332 666 999999999866655 67776654432 12333222222 233333322
Q ss_pred HH---HHhccCC--HHHHHHHHHHHHHHHHHHHhh-CCCcc
Q psy12791 246 WL---VTRGLKT--LPCRLKEHERGSIEVAKFLES-HPCVK 280 (393)
Q Consensus 246 ~~---~~~~~~~--~~~~~~~~~~~~~~l~~~l~~-~~~~~ 280 (393)
.. +.+.++. ...++++..++.+.+++.|++ .+++.
T Consensus 403 aal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~ 443 (730)
T 1c4k_A 403 AALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFR 443 (730)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeE
Confidence 21 1121222 344677777888888999987 56654
No 194
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.89 E-value=5.8e-22 Score=190.51 Aligned_cols=322 Identities=13% Similarity=0.052 Sum_probs=190.5
Q ss_pred CCCC-CCCCC--CCcc-CCeeeeCCCCCCCCC-ccccCCCCchHHHHHHHHHHHhCCC-cEEEec-cHHHHH-HHHHHhc
Q psy12791 23 QWRS-QCVIP--PIIL-STTFKQNTPGQPPQG-FEYSRSNNPTRRNLERCIASLEEAK-HGLCYS-SGLGAV-TAVTHLL 94 (393)
Q Consensus 23 ~~~~-~~~~~--p~~~-~~~~~~~~~~~~~~~-~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~-~G~~al-~~~~~~~ 94 (393)
.++| +++.+ +++. ++.+.+++.+.+... +....|+.+...++++.++++++.+ +.++++ +|++++ .++..+.
T Consensus 44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~ 123 (433)
T 1zod_A 44 AILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAK 123 (433)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred EEEEcccchhccccCCCCHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHH
Confidence 4556 44443 5553 344444433321111 1113455677889999999999854 556555 456667 5554332
Q ss_pred --CCCCeEEEcCCCccchHHHHHHhc----------ccCCcEEEeeCC------C---------CHHHHHhhcC----CC
Q psy12791 95 --SAGDHIISGDDVYGGTYRYFAQVA----------PKIGLEVDFVDL------R---------KIENLIKYIK----PN 143 (393)
Q Consensus 95 --~~gd~vl~~~~~y~~~~~~~~~~~----------~~~g~~v~~~~~------~---------d~~~l~~~l~----~~ 143 (393)
..+|+|++.+|+|++......... ...|+..+.++. + |++++++.++ ++
T Consensus 124 ~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 203 (433)
T 1zod_A 124 LVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGN 203 (433)
T ss_dssp HHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSC
T ss_pred HhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCC
Confidence 346799999999976432211111 112555554432 1 3888888886 45
Q ss_pred CcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-cCCC-----CCcCcEEEEcccccccCCCCc
Q psy12791 144 TKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-QKSL-----PWGVDIVLYSLTKYMNGHSDV 213 (393)
Q Consensus 144 ~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~~-----~~~~di~~~S~sK~~~G~~G~ 213 (393)
+++|+++..+||||.+.+ +++|.++|+++ |+++|+||+|+++.. .... ....|+ .|+||.++ . |+
T Consensus 204 ~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DEv~~~~g~~g~~~~~~~~~~~~di--~s~sK~~~-~-G~ 278 (433)
T 1zod_A 204 LAAFIAEPILSSGGIIELPDGYMAALKRKCEAR-GMLLILDEAQTGVGRTGTMFACQRDGVTPDI--LTLSKTLG-A-GL 278 (433)
T ss_dssp EEEEEECSEETTTTCEECCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSTHHHHTCCCSE--EEECHHHH-T-TS
T ss_pred eEEEEEccccCCCCcccCCHHHHHHHHHHHHHh-CCEEEEeccccCCCcCchHhHHhhcCCCCCE--EEeccccc-C-CC
Confidence 667666555688998766 99999999999 999999999996422 1111 123454 48899994 4 89
Q ss_pred eEEEEEecChHHHHHHHHHHHh--cCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhh----CCCcceEeCC
Q psy12791 214 VMGATVTNDDSLQARLKFLQNS--MGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLES----HPCVKGVLHP 285 (393)
Q Consensus 214 r~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~----~~~~~~v~~~ 285 (393)
|+||++++ +++++.+...... .....++..+..+...++.+. ...++..++.+.+.+.|++ ++.+..+
T Consensus 279 ~ig~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~--- 354 (433)
T 1zod_A 279 PLAAIVTS-AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDV--- 354 (433)
T ss_dssp SCEEEEEC-HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE---
T ss_pred CeeEEEEh-HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE---
Confidence 99999997 7888877542111 112235555554444443221 1334445555555555543 2332211
Q ss_pred CCCCCcchHHHhhhcCCCcceEEEEEcCC-------HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHh
Q psy12791 286 GLPSHPNHELAKSQWSGTSGMLSFYVNGG-------AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRD 358 (393)
Q Consensus 286 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~ 358 (393)
.+.|.++++.+.+. ......+.+.+...++.+..|+.+
T Consensus 355 ---------------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-------------------- 399 (433)
T 1zod_A 355 ---------------RGRGLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQLP-------------------- 399 (433)
T ss_dssp ---------------EEETTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECCT--------------------
T ss_pred ---------------EEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCCC--------------------
Confidence 12356788877421 123455666554445555544321
Q ss_pred hcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 359 ALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 359 ~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+ .++++|+++++..++++++.+.++|+++.
T Consensus 400 --~-~~~~lRi~~~~~~t~~~i~~~l~~l~~~l 429 (433)
T 1zod_A 400 --G-MGGVFRIAPPLTVSEDEIDLGLSLLGQAI 429 (433)
T ss_dssp --T-SCCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred --C-CCCEEEEECCcCCCHHHHHHHHHHHHHHH
Confidence 0 14899999999988888888888877653
No 195
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.89 E-value=1.1e-22 Score=196.57 Aligned_cols=324 Identities=13% Similarity=0.080 Sum_probs=198.2
Q ss_pred CCCCC-CCC--CCCCccC-CeeeeCCCCCCCCC-ccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHHH-HHHHHhc
Q psy12791 22 DQWRS-QCV--IPPIILS-TTFKQNTPGQPPQG-FEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGAV-TAVTHLL 94 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~~~-~~~~~~~~~~~~~~-~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~al-~~~~~~~ 94 (393)
..++| +++ .++++.+ +.+.+++.+.+... +....++++...++++.|+++++.+ +.+++++|++++ .++..+.
T Consensus 49 ~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al~~~~ 128 (452)
T 3n5m_A 49 KRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIAR 128 (452)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHHHHHH
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCCCCceEEEeCchHHHHHHHHHHHH
Confidence 45678 555 4677654 45555443332221 2123355678899999999998865 544445556667 5555544
Q ss_pred -----C---CCCeEEEcCCCccchHHHHHHhc---------ccCCcEEEeeCC--------CC---------HHHHHhhc
Q psy12791 95 -----S---AGDHIISGDDVYGGTYRYFAQVA---------PKIGLEVDFVDL--------RK---------IENLIKYI 140 (393)
Q Consensus 95 -----~---~gd~vl~~~~~y~~~~~~~~~~~---------~~~g~~v~~~~~--------~d---------~~~l~~~l 140 (393)
. ++|+|++.+++|++......... ......+..++. +| ++++++.+
T Consensus 129 ~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l 208 (452)
T 3n5m_A 129 QYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVM 208 (452)
T ss_dssp HHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHH
Confidence 4 78999999999986432211110 001112344433 23 88898888
Q ss_pred C----CCCcEEEEecC-CCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-cCC-----CCCcCcEEEEcccc
Q psy12791 141 K----PNTKMVWIENP-TNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-QKS-----LPWGVDIVLYSLTK 205 (393)
Q Consensus 141 ~----~~~~~v~l~~p-~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~-----~~~~~di~~~S~sK 205 (393)
. +++++|+++.+ +| ||.+++ +++|.++|++| |++||+||+|..+.. ... .....|++ ++||
T Consensus 209 ~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK 284 (452)
T 3n5m_A 209 TWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKH-GALLISDEVICGFGRTGKAFGFMNYDVKPDII--TMAK 284 (452)
T ss_dssp HHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE--EECG
T ss_pred HhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHc-CCEEEEecchhCCCcccccchhhhcCCCCCEE--eecc
Confidence 6 45788888888 89 999887 99999999999 999999999986421 111 11234555 6889
Q ss_pred cccCCCC-ceEEEEEecChHHHHHHHH---HH---HhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHh--
Q psy12791 206 YMNGHSD-VVMGATVTNDDSLQARLKF---LQ---NSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLE-- 274 (393)
Q Consensus 206 ~~~G~~G-~r~G~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~-- 274 (393)
.++ . | +|+||++++ +++++.+.. .. .......++..+..+...++.+. ...++..++.+.+.+.|+
T Consensus 285 ~l~-~-G~~~ig~~~~~-~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~ 361 (452)
T 3n5m_A 285 GIT-S-AYLPLSATAVK-REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEE 361 (452)
T ss_dssp GGG-T-TSSCCEEEEEE-HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-C-CCcceEEEEEC-HHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 994 5 8 999999997 888876632 11 11223345666665555444321 123444455555555554
Q ss_pred --hCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC--------HHHHHHHHHhcCccccccccCCccccccCc
Q psy12791 275 --SHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG--------AEETRIFLESLLIFRCAESLGGIESLADLP 344 (393)
Q Consensus 275 --~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~ 344 (393)
.++.+..+ ++.|.++++.+..+ .+....+.+.+...++.+..++.+..
T Consensus 362 ~~~~~~~~~~------------------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~---- 419 (452)
T 3n5m_A 362 IGEHPLVGDI------------------RGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTA---- 419 (452)
T ss_dssp HTTCTTEEEE------------------EESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSST----
T ss_pred HhcCCCeEEE------------------EEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccC----
Confidence 33433222 22356777776321 23344555555544555554432210
Q ss_pred ccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 345 AEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+++|||+++...++++++.+.++|+++.
T Consensus 420 -----------------~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 449 (452)
T 3n5m_A 420 -----------------GYNNILTLAPPLVISSEEIAFVIGTLKTAM 449 (452)
T ss_dssp -----------------TCCCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred -----------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 125899999999999999999888887664
No 196
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.88 E-value=6.4e-23 Score=198.14 Aligned_cols=321 Identities=12% Similarity=0.062 Sum_probs=191.1
Q ss_pred CCCCC-CCC--CCCCcc-CCeeeeCCCCCCCCCccc--cCCCCchHHHHHHHHHHHhCC---CcEEEeccHHHHH-HHHH
Q psy12791 22 DQWRS-QCV--IPPIIL-STTFKQNTPGQPPQGFEY--SRSNNPTRRNLERCIASLEEA---KHGLCYSSGLGAV-TAVT 91 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~~-~~~~~~~~~~~~~~~~~y--~~~~~~~~~~lr~~la~~~~~---~~~i~~~~G~~al-~~~~ 91 (393)
..++| +++ .++++. ++.+.+++.+++.....| ..++++...+|++.|+++++. ++.+++++|++|+ .++.
T Consensus 61 ~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk 140 (451)
T 3oks_A 61 NRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVK 140 (451)
T ss_dssp CEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHH
T ss_pred CEEEEcCCCccccccCCCCHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHH
Confidence 35677 555 677765 445555443332222223 346678889999999999863 2456666677777 5554
Q ss_pred Hhc--CCCCeEEEcCCCccchHHHHHHh----------cccCCcEEEeeCCC------------------CHHHHHhhc-
Q psy12791 92 HLL--SAGDHIISGDDVYGGTYRYFAQV----------APKIGLEVDFVDLR------------------KIENLIKYI- 140 (393)
Q Consensus 92 ~~~--~~gd~vl~~~~~y~~~~~~~~~~----------~~~~g~~v~~~~~~------------------d~~~l~~~l- 140 (393)
... ..+++|++.+++|++.......+ .......+..++.. +++.+++.+
T Consensus 141 ~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~ 220 (451)
T 3oks_A 141 IARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVID 220 (451)
T ss_dssp HHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHH
Confidence 433 24588999999998644222211 11111244555443 133333333
Q ss_pred ---CCC-CcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccccc-CC-----CCCcCcEEEEccccc
Q psy12791 141 ---KPN-TKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQ-KS-----LPWGVDIVLYSLTKY 206 (393)
Q Consensus 141 ---~~~-~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~-~~-----~~~~~di~~~S~sK~ 206 (393)
.++ +++|+++..+++.|.+.+ +++|.++|++| |++||+||+|..+... .. .....|++ |+||.
T Consensus 221 ~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--t~sK~ 297 (451)
T 3oks_A 221 KQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKN-DVVFIADEVQTGFARTGAMFACEHEGIDPDLI--VTAKG 297 (451)
T ss_dssp HHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGG
T ss_pred hhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHc-CCEEEEEecccCCCccccchhhhhcCCCCCee--eehhh
Confidence 333 455555555555566666 99999999999 9999999999864211 11 11234555 78899
Q ss_pred ccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHh----hCCCcc
Q psy12791 207 MNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLE----SHPCVK 280 (393)
Q Consensus 207 ~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~----~~~~~~ 280 (393)
++ . |+|+||++++ +++++.+...........++..+..+...++.+. ...++..++.+.+.+.|+ .++.+.
T Consensus 298 l~-~-G~~iG~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 374 (451)
T 3oks_A 298 IA-G-GLPLSAVTGR-AEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIG 374 (451)
T ss_dssp GG-T-TSSCEEEEEE-HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred hh-C-CcceEEEEEC-HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 94 4 8999999997 8887766533332333456666665555544322 123444444444444443 344432
Q ss_pred eEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC------CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCCh
Q psy12791 281 GVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG------GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPK 354 (393)
Q Consensus 281 ~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~ 354 (393)
.+ ++.|.++++.+.. +......+.+.+...++.+..++.
T Consensus 375 ~~------------------~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~----------------- 419 (451)
T 3oks_A 375 DV------------------RGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGT----------------- 419 (451)
T ss_dssp EE------------------EEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECT-----------------
T ss_pred EE------------------EEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCC-----------------
Confidence 22 2236788888831 344566666666554555433221
Q ss_pred hhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 355 ETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 355 ~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+++|+++++..++++++.+.++|+++.
T Consensus 420 --------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 448 (451)
T 3oks_A 420 --------YGNVVRFLPPLSIGDDLLNEGLDVLEEVL 448 (451)
T ss_dssp --------TSCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred --------CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 14789999999999888888888887654
No 197
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.88 E-value=1.2e-21 Score=191.09 Aligned_cols=286 Identities=14% Similarity=0.164 Sum_probs=186.0
Q ss_pred chHHHHHHH----HHHHhCCCc-----------EEEeccHHHHH-HHHHHhcC---C------CC--------e--EEEc
Q psy12791 59 PTRRNLERC----IASLEEAKH-----------GLCYSSGLGAV-TAVTHLLS---A------GD--------H--IISG 103 (393)
Q Consensus 59 ~~~~~lr~~----la~~~~~~~-----------~i~~~~G~~al-~~~~~~~~---~------gd--------~--vl~~ 103 (393)
+...+++++ +++++|.+. .+++++|++++ .++.+... + || . |+++
T Consensus 109 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s 188 (486)
T 1js3_A 109 PACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYAS 188 (486)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEE
T ss_pred hhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEEC
Confidence 455555554 567778763 46666667775 55544321 1 42 3 7789
Q ss_pred CCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCCCc------EEEEecCCCCcccccCHHHHHHHHHhC
Q psy12791 104 DDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPNTK------MVWIENPTNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 104 ~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~~~------~v~l~~p~nptG~~~~~~~l~~l~~~~ 172 (393)
.++|.+ +.+.++..|++++.+|.+ |+++|++++.++++ +|++++|+||||.+.|+++|.++|+++
T Consensus 189 ~~~h~s----~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~ 264 (486)
T 1js3_A 189 DQAHSS----VERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEE 264 (486)
T ss_dssp TTCCHH----HHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHT
T ss_pred CCCcHH----HHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHc
Confidence 999985 667778889999999985 79999999976654 888899999999999999999999999
Q ss_pred CCcEEEEeCccCcccccCC-CC------CcCcEEEEcccccccCCCCceEEEEEecChHH-HHHHHHHHHhc--------
Q psy12791 173 PDILLVLDNTFLTAYYQKS-LP------WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSL-QARLKFLQNSM-------- 236 (393)
Q Consensus 173 ~~~~livDea~~~~~~~~~-~~------~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~-~~~~~~~~~~~-------- 236 (393)
|+++++|++|+.+....+ .. .++|+++.|+||+++ .| .++|+++++++.. .+.+.....+.
T Consensus 265 -~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~-~p-~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~ 341 (486)
T 1js3_A 265 -DIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLL-VN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSG 341 (486)
T ss_dssp -TCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSS-CC-SSCEEEEESCHHHHHGGGC------------CC
T ss_pred -CCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcC-CC-cceEEEEEeCHHHHHHHhcCCchhhCCCccccc
Confidence 999999999997654221 11 257999999999995 44 4699999986654 33331111100
Q ss_pred ------------CCCCCHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCC
Q psy12791 237 ------------GVVPSPFDCWLVTR--GLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSG 302 (393)
Q Consensus 237 ------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~ 302 (393)
+........+.+++ +.+.+....++..++++.+.+.|++.|++..+..|.
T Consensus 342 ~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---------------- 405 (486)
T 1js3_A 342 LITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVT---------------- 405 (486)
T ss_dssp SCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCC----------------
T ss_pred CCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCc----------------
Confidence 00112233333332 223455667777788889999998877765221121
Q ss_pred CcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEe-cCCChHHHHH
Q psy12791 303 TSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSV-GVEGYTDLIA 381 (393)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~-~~~~~~~~i~ 381 (393)
.+++.|.+.+.......+.+.|...+.....++. + ...+++|+++ +..+++++++
T Consensus 406 -~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~--------------~---------~~~~~lRi~~~~~~~t~~di~ 461 (486)
T 1js3_A 406 -LGLVCFRLKGSDGLNEALLERINSARKIHLVPCR--------------L---------RGQFVLRFAICSRKVESGHVR 461 (486)
T ss_dssp -SSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEE--------------E---------TTEEEEEEECCCTTCCHHHHH
T ss_pred -eeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEE--------------E---------CCEEEEEEEeCCCCCCHHHHH
Confidence 4678888854333346666665432321111000 0 0147999998 4557788888
Q ss_pred HHHHHHHHhh
Q psy12791 382 DLDQALRKAC 391 (393)
Q Consensus 382 ~l~~al~~~~ 391 (393)
.+.++|+++.
T Consensus 462 ~~~~~l~~~~ 471 (486)
T 1js3_A 462 LAWEHIRGLA 471 (486)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8777776553
No 198
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.88 E-value=3.3e-22 Score=193.69 Aligned_cols=316 Identities=12% Similarity=0.054 Sum_probs=189.4
Q ss_pred CCCCC-CCC--CCCCccC-CeeeeCCCCCCCC---CccccCCCCchHHHHHHHHHHHhCCC-cEEEe-ccHHHHH-HHHH
Q psy12791 22 DQWRS-QCV--IPPIILS-TTFKQNTPGQPPQ---GFEYSRSNNPTRRNLERCIASLEEAK-HGLCY-SSGLGAV-TAVT 91 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~~~-~~~~~~~~~~~~~---~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~-~~G~~al-~~~~ 91 (393)
..++| +++ .++++.+ +.+.+++.+++.. .+.+..++++...+|++.|+++++.+ +.+++ ++|++++ .++.
T Consensus 50 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~ 129 (459)
T 4a6r_A 50 NKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIR 129 (459)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHH
T ss_pred CEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHH
Confidence 45678 666 6777664 4555444332211 12234567788899999999998754 45555 5556667 6665
Q ss_pred HhcC--------CCCeEEEcCCCccchHHHHHHh---------cccC--CcEEEeeCC----C---C--------HHHHH
Q psy12791 92 HLLS--------AGDHIISGDDVYGGTYRYFAQV---------APKI--GLEVDFVDL----R---K--------IENLI 137 (393)
Q Consensus 92 ~~~~--------~gd~vl~~~~~y~~~~~~~~~~---------~~~~--g~~v~~~~~----~---d--------~~~l~ 137 (393)
.+.. +++.|++.+|+|++........ .... +...+.+|. . | +++++
T Consensus 130 ~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le 209 (459)
T 4a6r_A 130 MVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLE 209 (459)
T ss_dssp HHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHH
Confidence 5543 5789999999998643221111 1111 223333332 1 2 67788
Q ss_pred hhcC----CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccccc-CCC-----CCcCcEEEEcc
Q psy12791 138 KYIK----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQ-KSL-----PWGVDIVLYSL 203 (393)
Q Consensus 138 ~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~-~~~-----~~~~di~~~S~ 203 (393)
+.+. +++++|+++.++|++|.+.+ +++|.++|++| |++||+||+|..+... ... ....|++ ++
T Consensus 210 ~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~--t~ 286 (459)
T 4a6r_A 210 EKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKY-DVLLVADEVICGFGRTGEWFGHQHFGFQPDLF--TA 286 (459)
T ss_dssp HHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EE
T ss_pred HHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcccccchHhhcCCCCCee--eh
Confidence 8775 34667777777777888776 99999999999 9999999999864211 111 1234565 57
Q ss_pred cccccCCCCceEEEEEecChHHHHHHH-----HHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHH-HHHHHHHHHH--
Q psy12791 204 TKYMNGHSDVVMGATVTNDDSLQARLK-----FLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHE-RGSIEVAKFL-- 273 (393)
Q Consensus 204 sK~~~G~~G~r~G~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~l~~~l-- 273 (393)
||.++ ..|+|+||++++ +++++.+. .....+ ..++..+..+...++.+. ...++.. ++...+.+.|
T Consensus 287 sK~l~-gg~~~lg~v~~~-~~i~~~~~~~~~~~~~~t~--~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~ 362 (459)
T 4a6r_A 287 AKGLS-SGYLPIGAVFVG-KRVAEGLIAGGDFNHGFTY--SGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRE 362 (459)
T ss_dssp CGGGG-TTSSCCEEEEEC-HHHHHHHHHHCTTHHHHHH--CSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHH
T ss_pred hhhhc-CCCCCccceeeC-HHHHHHhhcCCCcccCCCC--CCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 89994 555899999997 88888876 222233 335666555555444221 1233444 4444444444
Q ss_pred --hhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC----------HHHHHHHHHhcCccccccccCCccccc
Q psy12791 274 --ESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG----------AEETRIFLESLLIFRCAESLGGIESLA 341 (393)
Q Consensus 274 --~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~~~~g~~~s~~ 341 (393)
..++.+..+ ++.|.++.+.+..+ ......+.+.+...++.+..+
T Consensus 363 ~l~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~------ 418 (459)
T 4a6r_A 363 TFSRFEHVDDV------------------RGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRAC------ 418 (459)
T ss_dssp HHTTCTTEEEE------------------EEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEE------
T ss_pred HHhcCCCeEEE------------------EEEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecC------
Confidence 334433222 22356778887421 112444545444334333221
Q ss_pred cCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 342 DLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.+++||++++..++++++.+.++|+++
T Consensus 419 ----------------------g~~iRi~~~~~~t~e~i~~~l~~l~~~ 445 (459)
T 4a6r_A 419 ----------------------GDHIVSAPPLVMTRAEVDEMLAVAERC 445 (459)
T ss_dssp ----------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ----------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 268999999888888887777777654
No 199
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.88 E-value=4.5e-22 Score=192.05 Aligned_cols=206 Identities=16% Similarity=0.114 Sum_probs=144.0
Q ss_pred HHHH-HHHHHHhCCCcEEE-eccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhccc--CCcEEEeeCCC-----
Q psy12791 62 RNLE-RCIASLEEAKHGLC-YSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPK--IGLEVDFVDLR----- 131 (393)
Q Consensus 62 ~~lr-~~la~~~~~~~~i~-~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~--~g~~v~~~~~~----- 131 (393)
+++. +.+++++|.+...+ +++|++++ .++.+++++||+|++++|+|++.+. +...... .+..++.++.+
T Consensus 93 e~~a~~~la~~~g~~~~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~ 171 (447)
T 3h7f_A 93 ENLARDRAKALFGAEFANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLT-HGMRLNFSGKLYENGFYGVDPATHL 171 (447)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGG-GTCTTSHHHHSSEEEEECCCTTTCS
T ss_pred HHHHHHHHHHHcCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccc-hhhhhhhcCCeeEEEEcCcCcccCC
Confidence 3344 88999999986555 89999887 7788889999999999999875211 0000111 23456666542
Q ss_pred -CHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccc-----cCCCCCcCcEEEEccc
Q psy12791 132 -KIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYY-----QKSLPWGVDIVLYSLT 204 (393)
Q Consensus 132 -d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~-----~~~~~~~~di~~~S~s 204 (393)
|++++++.+. .++++|++++|+||++. ++++|.++|+++ |+++|+||+|..+.. ..+. .+.|+++.|+|
T Consensus 172 ~d~~~l~~~i~~~~~~~i~~~~~~~~~~~--~l~~i~~l~~~~-g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~s 247 (447)
T 3h7f_A 172 IDMDAVRATALEFRPKVIIAGWSAYPRVL--DFAAFRSIADEV-GAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVH 247 (447)
T ss_dssp CCHHHHHHHHHHHCCSEEEEECSSCCSCC--CHHHHHHHHHHH-TCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESS
T ss_pred cCHHHHHHHHHhcCCeEEEEcCCCCCCcc--CHHHHHHHHHHc-CCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCC
Confidence 7899998885 36899999999999876 999999999999 999999999865421 1122 25689999999
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHHHHhc--CCCCCHHHHH--HHHhc-cC-CHHHHHHHHHHHHHHHHHHHhhC
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKFLQNSM--GVVPSPFDCW--LVTRG-LK-TLPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~-~~-~~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
|+++| .|+||++++ +++.+.+....... +....+..+. .+... .+ .+....++..++.+.+.+.|++.
T Consensus 248 K~l~G---~~gG~i~~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 248 KTLGG---GRSGLIVGK-QQYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp GGGCC---CSCEEEEEC-GGGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred cCCCC---CCeEEEEEC-HHHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99844 478999997 77877776554322 2222221221 22222 22 34556777888888888888754
No 200
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.88 E-value=4.4e-22 Score=192.34 Aligned_cols=320 Identities=14% Similarity=0.094 Sum_probs=190.4
Q ss_pred CCCCC-CCC--CCCCcc-CCeeeeCCCCCCCCC--ccccCCCCchHHHHHHHHHHHhCCC---cEEEeccHHHHH-HHHH
Q psy12791 22 DQWRS-QCV--IPPIIL-STTFKQNTPGQPPQG--FEYSRSNNPTRRNLERCIASLEEAK---HGLCYSSGLGAV-TAVT 91 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~~-~~~~~~~~~~~~~~~--~~y~~~~~~~~~~lr~~la~~~~~~---~~i~~~~G~~al-~~~~ 91 (393)
..++| +++ .++++. ++.+.+++.+++... +.+..++++...+|++.|+++++.+ +.+++++|++|+ .++.
T Consensus 64 ~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk 143 (453)
T 4ffc_A 64 NSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIK 143 (453)
T ss_dssp CEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHH
T ss_pred CEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHH
Confidence 45678 666 677765 455555443332112 2233467788899999999998732 455556667777 5554
Q ss_pred Hhc--CCCCeEEEcCCCccchHHHHHHhcc----------cCCcEEEeeCCC----C-------------HHHHHhhcCC
Q psy12791 92 HLL--SAGDHIISGDDVYGGTYRYFAQVAP----------KIGLEVDFVDLR----K-------------IENLIKYIKP 142 (393)
Q Consensus 92 ~~~--~~gd~vl~~~~~y~~~~~~~~~~~~----------~~g~~v~~~~~~----d-------------~~~l~~~l~~ 142 (393)
... ..++.|++.+++|++.......+.. .....+..++.. | ++.+++.+.+
T Consensus 144 ~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~ 223 (453)
T 4ffc_A 144 VARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGA 223 (453)
T ss_dssp HHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCG
T ss_pred HHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCC
Confidence 332 3468999999999865432222111 111134444432 3 3566666655
Q ss_pred CCcEEEEecCCCCc-ccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-cCCCC-----CcCcEEEEcccccccCCC
Q psy12791 143 NTKMVWIENPTNPL-MTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-QKSLP-----WGVDIVLYSLTKYMNGHS 211 (393)
Q Consensus 143 ~~~~v~l~~p~npt-G~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~~~-----~~~di~~~S~sK~~~G~~ 211 (393)
++.+++++.|+|++ |.+.+ +++|.++|++| |++||+||+|..+.. ..... ...|++ +|||.++ .
T Consensus 224 ~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~--t~sK~~~-~- 298 (453)
T 4ffc_A 224 QSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASEN-GVVFIADEVQTGFARTGAWFASEHEGIVPDIV--TMAKGIA-G- 298 (453)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGG-T-
T ss_pred CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHc-CCEEEEecCccCCCcccccchhhhcCCCcchH--hhhhhhc-C-
Confidence 55555555666655 55555 99999999999 999999999986421 11111 123444 6889994 5
Q ss_pred CceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHH----hhCCCcceEeCC
Q psy12791 212 DVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFL----ESHPCVKGVLHP 285 (393)
Q Consensus 212 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l----~~~~~~~~v~~~ 285 (393)
|+|+||++++ +++++.+...........++..+..+...++.+. ...++..++.+.+.+.| ..++.+..+
T Consensus 299 G~~~G~~~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--- 374 (453)
T 4ffc_A 299 GMPLSAVTGR-AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV--- 374 (453)
T ss_dssp TSSCEEEEEE-HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE---
T ss_pred CcCeEEEEEC-HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE---
Confidence 8999999997 8887766533322233446666655554443221 12333344444444444 344443222
Q ss_pred CCCCCcchHHHhhhcCCCcceEEEEEcC------CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhh
Q psy12791 286 GLPSHPNHELAKSQWSGTSGMLSFYVNG------GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDA 359 (393)
Q Consensus 286 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~ 359 (393)
++.|.++++.+.. +.+....+.+.+...++.+..++.
T Consensus 375 ---------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------- 417 (453)
T 4ffc_A 375 ---------------RGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGT---------------------- 417 (453)
T ss_dssp ---------------EEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECT----------------------
T ss_pred ---------------EeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCC----------------------
Confidence 2235788888831 344566666666555555543221
Q ss_pred cCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 360 LGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 360 ~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
..+.+|+++++..++++++.+.++|+++
T Consensus 418 ---~~~~iRi~~~~~~t~e~i~~~l~~l~~~ 445 (453)
T 4ffc_A 418 ---FGNVIRLLPPLVIGDDLLDEGITALSDI 445 (453)
T ss_dssp ---TSCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ---CCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 1478999999888888777777776654
No 201
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.87 E-value=6.2e-21 Score=186.75 Aligned_cols=290 Identities=11% Similarity=0.091 Sum_probs=191.0
Q ss_pred CCchHHHHHHHH----HHHhCCC----cEEEeccHHHHH-HHHHHhcC--------------CCCeEEEcCCCccchHHH
Q psy12791 57 NNPTRRNLERCI----ASLEEAK----HGLCYSSGLGAV-TAVTHLLS--------------AGDHIISGDDVYGGTYRY 113 (393)
Q Consensus 57 ~~~~~~~lr~~l----a~~~~~~----~~i~~~~G~~al-~~~~~~~~--------------~gd~vl~~~~~y~~~~~~ 113 (393)
..|...++++.+ ++++|.+ ..+++++|+.++ .++.+... +++.|+++.++|.+
T Consensus 129 ~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s---- 204 (511)
T 3vp6_A 129 IAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS---- 204 (511)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTH----
T ss_pred cCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHH----
Confidence 356666666654 6667765 345566666675 55544432 56789999999985
Q ss_pred HHHhcccCCc---EEEeeCCC-----CHHHHHhhcCCC------CcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEE
Q psy12791 114 FAQVAPKIGL---EVDFVDLR-----KIENLIKYIKPN------TKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVL 179 (393)
Q Consensus 114 ~~~~~~~~g~---~v~~~~~~-----d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~liv 179 (393)
+.+.++..|+ +++.++.+ |+++|++++.++ +++|++++++|+||.+.|+++|.++|+++ |+++++
T Consensus 205 ~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~-~~~lhv 283 (511)
T 3vp6_A 205 IKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKY-NLWLHV 283 (511)
T ss_dssp HHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHH-TCEEEE
T ss_pred HHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHc-CCEEEE
Confidence 5666777787 88888876 899999998754 78999999999999999999999999999 999999
Q ss_pred eCccCcccccCC-----CC--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHH-Hhc---------------
Q psy12791 180 DNTFLTAYYQKS-----LP--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQ-NSM--------------- 236 (393)
Q Consensus 180 Dea~~~~~~~~~-----~~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~-~~~--------------- 236 (393)
|++|+.+....+ +. .++|+++.++||+++++.| .|+++.+++.+.+...... .+.
T Consensus 284 D~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 361 (511)
T 3vp6_A 284 DAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQ--CSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGD 361 (511)
T ss_dssp EETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGG
T ss_pred EccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcC--eEEEEEeCHHHHHHHhccCCccccCcccccccccCccC
Confidence 999998655222 11 2569999999999965655 7888887676655432110 010
Q ss_pred -----CCCCCHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEe--CCCCCCCcchHHHhhhcCCCcceE
Q psy12791 237 -----GVVPSPFDCWLVTR--GLKTLPCRLKEHERGSIEVAKFLESHPCVKGVL--HPGLPSHPNHELAKSQWSGTSGML 307 (393)
Q Consensus 237 -----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~--~~~l~~~~~~~~~~~~~~~~~~~~ 307 (393)
+........+.+++ +.+.+..++++..++++.+.+.|++.|+++.+. .|. .+++
T Consensus 362 ~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~-----------------~~~v 424 (511)
T 3vp6_A 362 KAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPE-----------------HTNV 424 (511)
T ss_dssp GSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCS-----------------SSCE
T ss_pred CCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCC-----------------eEEE
Confidence 00112233333333 234566778888899999999999887765322 121 3456
Q ss_pred EEEEcCC--------HH-------HHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEe-
Q psy12791 308 SFYVNGG--------AE-------ETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSV- 371 (393)
Q Consensus 308 ~~~~~~~--------~~-------~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~- 371 (393)
.|.+.+. .. .+..+.+.|...++.+.. . .+. +...+++|+++
T Consensus 425 ~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~--~-----~~~---------------~~~~~~lRi~~~ 482 (511)
T 3vp6_A 425 CFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVG--Y-----QPQ---------------GDKANFFRMVIS 482 (511)
T ss_dssp EEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEE--E-----EEE---------------TTEEEEEEECCC
T ss_pred EEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEE--E-----EEe---------------CCceEEEEEEec
Confidence 6654211 11 122344444332211100 0 000 01135799999
Q ss_pred cCCChHHHHHHHHHHHHHhhc
Q psy12791 372 GVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 372 ~~~~~~~~i~~l~~al~~~~~ 392 (393)
+..+++++++.+.++++++.+
T Consensus 483 ~~~~t~~di~~ll~~i~~~~~ 503 (511)
T 3vp6_A 483 NPAATQSDIDFLIEEIERLGQ 503 (511)
T ss_dssp CTTCCHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHH
Confidence 688999999999999987753
No 202
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.87 E-value=2.8e-21 Score=186.08 Aligned_cols=280 Identities=13% Similarity=0.094 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHhCCC-cEEEeccHHHH-H-HHHHH-hcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC----C
Q psy12791 61 RRNLERCIASLEEAK-HGLCYSSGLGA-V-TAVTH-LLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR----K 132 (393)
Q Consensus 61 ~~~lr~~la~~~~~~-~~i~~~~G~~a-l-~~~~~-~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----d 132 (393)
..++++.+++++|.+ +++++++|+++ + .+..+ .+++||+|+++.++|+++...+...++..|++++.++.+ |
T Consensus 110 ~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~~d 189 (438)
T 1wyu_A 110 TFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGRTP 189 (438)
T ss_dssp HHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTBCC
T ss_pred HHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCcCCccC
Confidence 568999999999987 44566666653 3 22222 357899999999999987666666667789999999863 2
Q ss_pred HHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCc-cCcccccCCCCCcCcEEEEccccccc---
Q psy12791 133 IENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNT-FLTAYYQKSLPWGVDIVLYSLTKYMN--- 208 (393)
Q Consensus 133 ~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea-~~~~~~~~~~~~~~di~~~S~sK~~~--- 208 (393)
+++ ++++|++|++++| ||||.+.|+++|.++|+++ |+++++|.. .+.+....+...++|+++.|.+| |+
T Consensus 190 ~~~----i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~-g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk-~~~~~ 262 (438)
T 1wyu_A 190 LPE----VGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGA-GALFVAVADPLSLGVLKPPGAYGADIAVGDGQS-LGLPM 262 (438)
T ss_dssp CCC----CCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHT-TCEEEEECCTTGGGTBCCHHHHTCSEEEEECTT-TTCCC
T ss_pred HHH----hCCCeEEEEEECC-CCCeEEecHHHHHHHHHHc-CCEEEEEechhhccCcCCCccCCCCEEEECCcc-cCCCc
Confidence 333 6678999999999 9999999999999999999 999996633 32222222323578999999444 21
Q ss_pred CCCCceEEEEEecChHHHHHHHH-------------------------HHHhcCCC-C---CHHHHHHH---Hhcc--CC
Q psy12791 209 GHSDVVMGATVTNDDSLQARLKF-------------------------LQNSMGVV-P---SPFDCWLV---TRGL--KT 254 (393)
Q Consensus 209 G~~G~r~G~~~~~~~~~~~~~~~-------------------------~~~~~~~~-~---~~~~~~~~---~~~~--~~ 254 (393)
++.|.++||++++ +++.+.+.. .+...+.. . ....+..+ +..+ +.
T Consensus 263 ~~~Gp~~G~l~~~-~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g 341 (438)
T 1wyu_A 263 GFGGPHFGFLATK-KAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEG 341 (438)
T ss_dssp GGGCSCCEEEEEC-GGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCeeEEEEc-HHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHH
Confidence 1233359999997 666554310 01111111 1 22222111 1111 12
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCcccccc--
Q psy12791 255 LPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAE-- 332 (393)
Q Consensus 255 ~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 332 (393)
+....++..++++.+.+.|++.+++. +..+. ..-.++.|.+..+ ...+.+.|...++.+
T Consensus 342 ~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~---------------~~~~~~~~~~~~~---~~~~~~~L~~~gi~v~~ 402 (438)
T 1wyu_A 342 LREVALKSVEMAHKLHALLLEVPGVR-PFTPK---------------PFFNEFALALPKD---PEAVRRALAERGFHGAT 402 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTCE-ECSCS---------------SBCSEEEEECSSC---HHHHHHHHHHTTCCCCE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeE-ECCCC---------------CeEEEEEEeCCCC---HHHHHHHHHHCCceecc
Confidence 44455666677788888888776654 22121 0113344554212 233444443334433
Q ss_pred ccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 333 SLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 333 ~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..+..+ +++++|+|++..+++++++.+.++|+++.
T Consensus 403 ~~~~~~------------------------~~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 403 PVPREY------------------------GENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp ECCTTS------------------------CSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred cccccc------------------------CCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 222110 15799999999999999999999998753
No 203
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.87 E-value=3.4e-21 Score=188.38 Aligned_cols=281 Identities=15% Similarity=0.100 Sum_probs=179.2
Q ss_pred HHHHHHHHhCCC--cEEE-eccHHHHH-HHHHH----hc---------CC------CC-eEEEcCCCccchHHHHHHhcc
Q psy12791 64 LERCIASLEEAK--HGLC-YSSGLGAV-TAVTH----LL---------SA------GD-HIISGDDVYGGTYRYFAQVAP 119 (393)
Q Consensus 64 lr~~la~~~~~~--~~i~-~~~G~~al-~~~~~----~~---------~~------gd-~vl~~~~~y~~~~~~~~~~~~ 119 (393)
+++.+++++|.+ +.++ +++|++++ .++.. ++ .+ || .|+++.++|.+ +...++
T Consensus 145 ~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s----~~~~~~ 220 (497)
T 2qma_A 145 VVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFT----VQKSAS 220 (497)
T ss_dssp HHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTH----HHHHHH
T ss_pred HHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHH----HHHHHH
Confidence 455599999874 4454 45556666 54443 22 12 46 78999999986 444555
Q ss_pred cCCc---EEEeeCCC-----CHHHHHhhcCCC----Cc--EEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCc
Q psy12791 120 KIGL---EVDFVDLR-----KIENLIKYIKPN----TK--MVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLT 185 (393)
Q Consensus 120 ~~g~---~v~~~~~~-----d~~~l~~~l~~~----~~--~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~ 185 (393)
..|. +++.+|.+ |++++++.+.++ ++ +|++++++||||.+.|+++|.++|+++ |+++++|++|+.
T Consensus 221 ~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~-~~~l~vD~a~~~ 299 (497)
T 2qma_A 221 WMGLGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKH-DMWMHVDGAYGG 299 (497)
T ss_dssp HTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH-TCEEEEEETTGG
T ss_pred HcCCCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHc-CCEEEEehhhhH
Confidence 5554 78888875 788888888643 44 888899999999999999999999999 999999999998
Q ss_pred ccccCCC-----CC-cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCC----C-------------CH
Q psy12791 186 AYYQKSL-----PW-GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVV----P-------------SP 242 (393)
Q Consensus 186 ~~~~~~~-----~~-~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~-------------~~ 242 (393)
+....+. .. .+|+++.|+||+++++ .++|+++++++...+.+.....+.... . ..
T Consensus 300 ~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p--~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~a 377 (497)
T 2qma_A 300 ALILSSHKSRLKGVERAHSISVDFHKLFYQT--ISCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFDA 377 (497)
T ss_dssp GGGGSTTGGGGTTGGGCSEEEEETTTTTCCC--SSCEEEEESCGGGGGGGCC--------------------CCSCCCTH
T ss_pred HHHhCcchHhhcCcccCCEEEEcchhccCCC--cceEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchhH
Confidence 6653321 12 5799999999999544 369999987665444332111110000 0 11
Q ss_pred HHHHHHHhcc--CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH----H
Q psy12791 243 FDCWLVTRGL--KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA----E 316 (393)
Q Consensus 243 ~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 316 (393)
...+.+++.+ +.+...+++..++++.+.+.|++.+++..+..|. .+++.|.+.+.. +
T Consensus 378 l~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----------------~~~v~f~~~~~~~~~~~ 440 (497)
T 2qma_A 378 LKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPS-----------------LSTVLFRATHETADLDE 440 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCS-----------------SSEEEEEECCSSSCHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCC-----------------ceEEEEEEcCCccCHHH
Confidence 2223333333 2345566777788889999998877654221121 468888885321 2
Q ss_pred HHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEe-cCCChHHHHHHHHHHHHHhh
Q psy12791 317 ETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSV-GVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 317 ~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~-~~~~~~~~i~~l~~al~~~~ 391 (393)
....+.+.+...++.+..+.. . ...+++|+++ +..+++++++.+.++|+++.
T Consensus 441 l~~~l~~~l~~~G~~~~~~~~------~-----------------~g~~~lRis~~~~~~t~edi~~~~~~l~~~~ 493 (497)
T 2qma_A 441 LNKALRLEALTRGIAVLGETI------V-----------------DGKTALKFTILNPCLTTSDFESLLSKINMLA 493 (497)
T ss_dssp HHHHHHHHHHHHTSCBCEEEE------E-----------------TTEEEEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeeE------E-----------------CCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 233444444332322211000 0 0146899998 88899999999998888764
No 204
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.87 E-value=1.4e-22 Score=194.69 Aligned_cols=243 Identities=14% Similarity=0.101 Sum_probs=156.7
Q ss_pred CCCCC-CCCC--CCCcc-CCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHHH-HHHHHhc-
Q psy12791 22 DQWRS-QCVI--PPIIL-STTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGAV-TAVTHLL- 94 (393)
Q Consensus 22 ~~~~~-~~~~--~p~~~-~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~al-~~~~~~~- 94 (393)
.+++| +++. ++++. ++.+.+++.+++.....+ .|+++...+|+++++++++.. +.+++++|++++ .++..+.
T Consensus 53 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~-~~~~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~ 131 (429)
T 3k28_A 53 NEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSF-GAPTEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARG 131 (429)
T ss_dssp CEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCC-SSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCc-CCCCHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHH
Confidence 45678 5553 77774 555655544332222212 356788999999999998533 455556677777 5554443
Q ss_pred -CCCCeEEEcCCCccchHHHHHHhcccCC-------------------cEEEeeCCCCHHHHHhhcC---CCCcEEEEec
Q psy12791 95 -SAGDHIISGDDVYGGTYRYFAQVAPKIG-------------------LEVDFVDLRKIENLIKYIK---PNTKMVWIEN 151 (393)
Q Consensus 95 -~~gd~vl~~~~~y~~~~~~~~~~~~~~g-------------------~~v~~~~~~d~~~l~~~l~---~~~~~v~l~~ 151 (393)
.++++|++.+++|++.. .......| .++..++.+|++++++.+. +++++|+++.
T Consensus 132 ~~~~~~vi~~~~~yhg~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep 208 (429)
T 3k28_A 132 YTGRNKILKFIGCYHGHG---DSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEP 208 (429)
T ss_dssp HHTCCEEEEEETCCCCSC---GGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred hhCCCEEEEECCCcCCCc---HHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcC
Confidence 36789999999987532 11111111 1455666678999988886 3567788777
Q ss_pred CCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccccCC------CCCcCcEEEEcccccccCCCCceEEEEEec
Q psy12791 152 PTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQKS------LPWGVDIVLYSLTKYMNGHSDVVMGATVTN 221 (393)
Q Consensus 152 p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~~~------~~~~~di~~~S~sK~~~G~~G~r~G~~~~~ 221 (393)
++|++|.+.+ +++|.++|++| |++||+||+|.++ .... .....|++ ++||.+ |. |+|+||++++
T Consensus 209 ~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~--t~sK~~-~~-G~~iG~~~~~ 282 (429)
T 3k28_A 209 VAGNMGVVPPQPGFLEGLREVTEQN-GALLIFDEVMTGF-RVAYNCGQGYYGVTPDLT--CLGKVI-GG-GLPVGAYGGK 282 (429)
T ss_dssp SBCTTSCBCCCTTHHHHHHHHHHHH-TCEEEEECTTTTT-TSSTTHHHHHHTCCCSEE--EECGGG-GT-TSCCEEEEEC
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHc-CCEEEEecccccc-ccCcchHHHHhCCCCcee--hhhhhh-cC-CCCeEEEEEc
Confidence 7888888888 99999999999 9999999999865 2111 11234554 688999 43 8999999997
Q ss_pred ChHHHHHHHHHH---HhcCCCCCHHHHHHHHhccCCH-HHHHHHHHHHHHHHHHHHhh
Q psy12791 222 DDSLQARLKFLQ---NSMGVVPSPFDCWLVTRGLKTL-PCRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 222 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~ 275 (393)
+++++.+.... .......++..+..+...++.. +...++..++.+.+.+.|++
T Consensus 283 -~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~l~~~L~~ 339 (429)
T 3k28_A 283 -AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLTPESYVEFERKAEMLEAGLRK 339 (429)
T ss_dssp -HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78877664321 1112234566555444433211 45566667777777777664
No 205
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.87 E-value=8e-21 Score=186.08 Aligned_cols=286 Identities=9% Similarity=0.061 Sum_probs=181.4
Q ss_pred HHHHHHHHHhCCC---cEEEe-ccHHHHH-HHHHHhc--------CCC-----C-eEEEcCCCccchHHHHHHhcccCCc
Q psy12791 63 NLERCIASLEEAK---HGLCY-SSGLGAV-TAVTHLL--------SAG-----D-HIISGDDVYGGTYRYFAQVAPKIGL 123 (393)
Q Consensus 63 ~lr~~la~~~~~~---~~i~~-~~G~~al-~~~~~~~--------~~g-----d-~vl~~~~~y~~~~~~~~~~~~~~g~ 123 (393)
++++.+++++|.+ +.+++ ++|++++ .++..+. ++| + .|+++.++|.+ +...++..|.
T Consensus 136 ~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s----~~~~~~~~g~ 211 (504)
T 2okj_A 136 ITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS----IKKAGAALGF 211 (504)
T ss_dssp HHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH----HHHHHHHTTS
T ss_pred HHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHH----HHHHHHHcCC
Confidence 3445568888875 34555 4555566 5555442 246 6 78899999985 4555555555
Q ss_pred ---EEEeeCCC-----CHHHHHhhcCC------CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc
Q psy12791 124 ---EVDFVDLR-----KIENLIKYIKP------NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ 189 (393)
Q Consensus 124 ---~v~~~~~~-----d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~ 189 (393)
+++.+|.+ |++++++.+.+ ++++|++++|+||||.+.|+++|.++|+++ |+++++|++|+.+...
T Consensus 212 g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~-g~~lhvD~a~~~~~~~ 290 (504)
T 2okj_A 212 GTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKY-NLWLHVDAAWGGGLLM 290 (504)
T ss_dssp CGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHH-TCEEEEEETTGGGGGG
T ss_pred CcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHc-CCEEEEehhhhhHHHh
Confidence 88888875 89999998865 589999999999999999999999999999 9999999999986643
Q ss_pred C-----CCC--CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHH-HHHHhc-CCC-------------------CC
Q psy12791 190 K-----SLP--WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLK-FLQNSM-GVV-------------------PS 241 (393)
Q Consensus 190 ~-----~~~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~-~~~~~~-~~~-------------------~~ 241 (393)
. .+. .++|+++.|+||+++++. ++|+++++++++.+... ....+. +.. ..
T Consensus 291 ~~~~~~~~~g~~~~D~i~~~~hK~~~~p~--~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~ 368 (504)
T 2okj_A 291 SRKHRHKLNGIERANSVTWNPHKMMGVLL--QCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVD 368 (504)
T ss_dssp CTTTGGGGTTGGGCSEEEECTTSTTCCCS--CCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCC
T ss_pred CHhhHhhcCCcccCCEEEECchhhcCCCc--ceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCcc
Confidence 1 122 267999999999995443 59999998655555321 111111 100 11
Q ss_pred HHHHHHHHhcc--CCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-----
Q psy12791 242 PFDCWLVTRGL--KTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG----- 314 (393)
Q Consensus 242 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 314 (393)
....+++.+.+ +.+....++..++++.+.+.|++.++++ +..+. ....+++.|...+.
T Consensus 369 ~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~--------------~p~~~~v~f~~~~~~~~~~ 433 (504)
T 2okj_A 369 IFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFE-MVFNG--------------EPEHTNVCFWYIPQSLRGV 433 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEE-ESSSS--------------CCSSSCEEEEECCGGGSSC
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEE-EEecC--------------CCCeEEEEEEEeCcccccc
Confidence 23333333322 2344566677778888888898777654 22210 00134555654221
Q ss_pred ---H-------HHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEec-CCChHHHHHHH
Q psy12791 315 ---A-------EETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVG-VEGYTDLIADL 383 (393)
Q Consensus 315 ---~-------~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~-~~~~~~~i~~l 383 (393)
. +....+.+.+...+.....+. +. +...+++|++++ ..+++++++.+
T Consensus 434 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~-------~~---------------~~~~~~lRis~~~~~~t~edi~~~ 491 (504)
T 2okj_A 434 PDSPQRREKLHKVAPKIKALMMESGTTMVGYQ-------PQ---------------GDKANFFRMVISNPAATQSDIDFL 491 (504)
T ss_dssp CCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEE-------EE---------------TTEEEEEEECCCCTTCCHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHhCCcEEEEee-------EE---------------CCceEEEEEEeCCCCCCHHHHHHH
Confidence 0 012344444433221110000 00 001368999997 88999999999
Q ss_pred HHHHHHhhc
Q psy12791 384 DQALRKACK 392 (393)
Q Consensus 384 ~~al~~~~~ 392 (393)
.++|+++.+
T Consensus 492 ~~~l~~~~~ 500 (504)
T 2okj_A 492 IEEIERLGQ 500 (504)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999987653
No 206
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.87 E-value=1.4e-22 Score=194.86 Aligned_cols=314 Identities=13% Similarity=0.075 Sum_probs=189.8
Q ss_pred CCCC-CCCC--CCCc-cCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHh-CCCcEEEeccHHHHH-HHHHH--hc
Q psy12791 23 QWRS-QCVI--PPII-LSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLE-EAKHGLCYSSGLGAV-TAVTH--LL 94 (393)
Q Consensus 23 ~~~~-~~~~--~p~~-~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~-~~~~~i~~~~G~~al-~~~~~--~~ 94 (393)
.++| +++. ++++ .++.+.+++.+.+.....+ .++.+...++++.|++++ +.+..+++++|++++ .++.. .+
T Consensus 57 ~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~ 135 (434)
T 2epj_A 57 RIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLY-GAPGEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGY 135 (434)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCC-SSCCHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCC-CCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHh
Confidence 4567 5554 4565 3455555544332222112 346678899999999998 554566666777777 55543 24
Q ss_pred CCCCeEEEcCCCccchHHHHHHhc----------ccCCc------EEEeeCCCCHHHHHhhcCC---CCcEEEEecCCCC
Q psy12791 95 SAGDHIISGDDVYGGTYRYFAQVA----------PKIGL------EVDFVDLRKIENLIKYIKP---NTKMVWIENPTNP 155 (393)
Q Consensus 95 ~~gd~vl~~~~~y~~~~~~~~~~~----------~~~g~------~v~~~~~~d~~~l~~~l~~---~~~~v~l~~p~np 155 (393)
.+++.|++.+++|++......... ...|+ .+..++..|++++++.+++ ++++|+++..+|+
T Consensus 136 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~ 215 (434)
T 2epj_A 136 TGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIAN 215 (434)
T ss_dssp HCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCS
T ss_pred hCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCC
Confidence 456788888999976321100000 11243 3666777799999988863 5677777766788
Q ss_pred cccccC----HHHHHHHHHhCCCcEEEEeCccCcccccCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHHH
Q psy12791 156 LMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQ 226 (393)
Q Consensus 156 tG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~ 226 (393)
||.+++ +++|.++|+++ |++||+||+|+.+..... .....|++ |+||+++ . |+|+||++++ ++++
T Consensus 216 ~G~~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~--s~sK~l~-~-G~~~G~v~~~-~~~~ 289 (434)
T 2epj_A 216 AGVIPPRREFLAALQRLSRES-GALLILDEVVTGFRLGLEGAQGYFNIEGDII--VLGKIIG-G-GFPVGAVAGS-REVM 289 (434)
T ss_dssp SSCBCCCHHHHHHHHHHHHHH-TCEEEEEETTTTTTSSTTHHHHHHTCCCSEE--EEEGGGG-T-TSSCEEEEEC-HHHH
T ss_pred CCccCCCHHHHHHHHHHHHHc-CCEEEEEcchhceeCCcchhhHHhCCCCCee--eecchhc-C-Ccceeeeeec-HHHH
Confidence 999998 99999999999 999999999995421111 11235654 8899994 5 8999999998 7777
Q ss_pred HHHHHHHH-hcC--CCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhC----CCcceEeCCCCCCCcchHHHh
Q psy12791 227 ARLKFLQN-SMG--VVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLESH----PCVKGVLHPGLPSHPNHELAK 297 (393)
Q Consensus 227 ~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~----~~~~~v~~~~l~~~~~~~~~~ 297 (393)
+.+..... ..+ ...++..+..+...++.+. ...++..++...+.+.|++. +....+
T Consensus 290 ~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--------------- 354 (434)
T 2epj_A 290 SLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTGLPYTI--------------- 354 (434)
T ss_dssp TTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCEEE---------------
T ss_pred HhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCcEEE---------------
Confidence 76543111 111 1345666555544443332 23445555566666666542 211111
Q ss_pred hhcCCCcceEEEEEcCC------------HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCC
Q psy12791 298 SQWSGTSGMLSFYVNGG------------AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDN 365 (393)
Q Consensus 298 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~ 365 (393)
++.|.++++.+.+. ......+.+.+...++.+..|+. .
T Consensus 355 ---~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~---------------------------~ 404 (434)
T 2epj_A 355 ---NRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNL---------------------------E 404 (434)
T ss_dssp ---EEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT---------------------------S
T ss_pred ---EEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCC---------------------------C
Confidence 12367889998531 23456666666555555544321 1
Q ss_pred eEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 366 LVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 366 ~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
. ++++...++++++.+.++|+++
T Consensus 405 ~--~~~~~~~t~e~i~~~l~~l~~~ 427 (434)
T 2epj_A 405 A--VFTGLPHQGEALEIAVEGLRSS 427 (434)
T ss_dssp C--EECCTTCSHHHHHHHHHHHHHH
T ss_pred c--EEEeccCCHHHHHHHHHHHHHH
Confidence 2 3444567777777777766654
No 207
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.87 E-value=1.2e-20 Score=179.37 Aligned_cols=214 Identities=13% Similarity=0.028 Sum_probs=140.3
Q ss_pred CCchHHHHHHHHHHHh-CCC---c---EEEeccHHHHH-HHHH----HhcCCCCeEEEcCCCccchHHHHHHhcccCCcE
Q psy12791 57 NNPTRRNLERCIASLE-EAK---H---GLCYSSGLGAV-TAVT----HLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE 124 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~-~~~---~---~i~~~~G~~al-~~~~----~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~ 124 (393)
|..+..+||+++++++ |.. + .+...+|+.++ .++. .+..|||+|++++|+|+. |..+++..|.+
T Consensus 85 p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~----y~~i~~~aG~~ 160 (420)
T 4h51_A 85 PISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPN----HYGVVKAAGWK 160 (420)
T ss_dssp CTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTH----HHHHHHHTTCC
T ss_pred CcCChHHHHHHHHHHhcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchh----HHHHHHHcCCe
Confidence 4578899999999974 321 1 22234445555 3332 245799999999999984 77778888886
Q ss_pred -EEeeCCC-------CHHHHHhhc---CCCCcEEEEecCCCCcccccC---HHHHHHHHHhCCCcEEEEeCccCcccccC
Q psy12791 125 -VDFVDLR-------KIENLIKYI---KPNTKMVWIENPTNPLMTVFD---VKAISAVVKQHPDILLVLDNTFLTAYYQK 190 (393)
Q Consensus 125 -v~~~~~~-------d~~~l~~~l---~~~~~~v~l~~p~nptG~~~~---~~~l~~l~~~~~~~~livDea~~~~~~~~ 190 (393)
+..++.. |.+.+.+.+ .++++++++++||||||.+++ +++|.++|+++ ++++++|++|.++.+..
T Consensus 161 ~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~-~~~~~~D~~Y~~~~~~~ 239 (420)
T 4h51_A 161 NICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAK-HHQVFFDSAYQGYASGS 239 (420)
T ss_dssp CEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHH-TCEEEEEESCTTTTTSC
T ss_pred EEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc-CceEeeehhhhhhccCC
Confidence 4333331 555555444 456788888999999999998 77888899999 99999999999865431
Q ss_pred C----C-------CCcCcEEEEcccccccCCCCceEEEEEecChHHH------HHHHHHHHhcCCCCCHHHHHHHHhccC
Q psy12791 191 S----L-------PWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQ------ARLKFLQNSMGVVPSPFDCWLVTRGLK 253 (393)
Q Consensus 191 ~----~-------~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (393)
. . .....+++.||||.+ |++|+|+||+++..+... ..+.........+++...+..+...+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~i~~~s~SK~~-~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~ 318 (420)
T 4h51_A 240 LDTDAYAARLFARRGIEVLLAQSFSKNM-GLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILS 318 (420)
T ss_dssp HHHHTHHHHHHHHTTCCCEEEEECTTTS-CCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred cccchHHHHhHHhhCceEEEEecccccc-ccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhc
Confidence 1 0 113458999999999 699999999988633221 122222233344445555444443332
Q ss_pred C----------HHHHHHHHHHHHHHHHHHHhhC
Q psy12791 254 T----------LPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 254 ~----------~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
. +...++++.+.++.+.+.|+..
T Consensus 319 d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~ 351 (420)
T 4h51_A 319 NNELRKEWEAELSAMAERIRTMRRTVYDELLRL 351 (420)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 2234445556666777777653
No 208
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.86 E-value=3.8e-20 Score=179.20 Aligned_cols=320 Identities=12% Similarity=0.007 Sum_probs=191.2
Q ss_pred CCCCC-CCC--CCCCccC-CeeeeCCCCCCCC---CccccCCCCchHHHHHHHHHHHhCCC-cEE-EeccHHHHH-HHHH
Q psy12791 22 DQWRS-QCV--IPPIILS-TTFKQNTPGQPPQ---GFEYSRSNNPTRRNLERCIASLEEAK-HGL-CYSSGLGAV-TAVT 91 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~~~-~~~~~~~~~~~~~---~~~y~~~~~~~~~~lr~~la~~~~~~-~~i-~~~~G~~al-~~~~ 91 (393)
.+++| +++ .+|++.+ +.+.+++.+++.. .+.+..++++...+|++.|+++++.. +.+ ++++|++++ .++.
T Consensus 51 ~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~ 130 (460)
T 3gju_A 51 RKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIK 130 (460)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHH
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHH
Confidence 45678 665 5777654 4555444332111 12233456778889999999997654 444 455566677 6665
Q ss_pred Hhc--------CCCCeEEEcCCCccchHHHHHHh---------cccCCcEEEeeC--C----CC------------HHHH
Q psy12791 92 HLL--------SAGDHIISGDDVYGGTYRYFAQV---------APKIGLEVDFVD--L----RK------------IENL 136 (393)
Q Consensus 92 ~~~--------~~gd~vl~~~~~y~~~~~~~~~~---------~~~~g~~v~~~~--~----~d------------~~~l 136 (393)
.+. .+++.|++.+++|++........ .......+..++ . +| ++++
T Consensus 131 ~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~l 210 (460)
T 3gju_A 131 LIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKL 210 (460)
T ss_dssp HHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHH
Confidence 544 24689999999998643222111 111122333343 3 22 5788
Q ss_pred HhhcC----CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-cCCC-----CCcCcEEEEc
Q psy12791 137 IKYIK----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-QKSL-----PWGVDIVLYS 202 (393)
Q Consensus 137 ~~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~~-----~~~~di~~~S 202 (393)
++.+. +++++|+++.++|++|.+.+ +++|.++|++| |++||+||+|..+.. .... ....|++ +
T Consensus 211 e~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~-~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~--t 287 (460)
T 3gju_A 211 EEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKY-DVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI--T 287 (460)
T ss_dssp HHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--E
T ss_pred HHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc-CCEEEEeccccCCCcccccchHhhcCCCCCee--e
Confidence 88775 45788888888888888776 99999999999 999999999986421 1111 1234555 6
Q ss_pred ccccccCCCCceEEEEEecChHHHHHHHHH-------HHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHH-
Q psy12791 203 LTKYMNGHSDVVMGATVTNDDSLQARLKFL-------QNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKF- 272 (393)
Q Consensus 203 ~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~- 272 (393)
+||.++ ..++|+||++++ +++++.+... ........++..+..+...++.+. ...++..++...+.+.
T Consensus 288 ~sK~l~-gG~~~lg~v~~~-~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l 365 (460)
T 3gju_A 288 IAKGLT-SAYAPLSGVIVA-DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAEL 365 (460)
T ss_dssp ECGGGT-TTSSCCEEEEEE-HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred eehhhc-CCCCCeEEEEEC-HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 789995 322799999998 8888887532 111223345666665555554221 1233444444444444
Q ss_pred ---HhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH----------HHHHHHHHhcCccccccccCCccc
Q psy12791 273 ---LESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA----------EETRIFLESLLIFRCAESLGGIES 339 (393)
Q Consensus 273 ---l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~g~~~s 339 (393)
+..++.+..+ ++.|.++++.+..+. +....+.+.+...++.+..++
T Consensus 366 ~~~l~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--- 424 (460)
T 3gju_A 366 AKAVGGHKNVGEV------------------RGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP--- 424 (460)
T ss_dssp HHHHTTSTTEEEE------------------EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS---
T ss_pred HHHHhcCCCeEEE------------------eeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC---
Confidence 4444443322 223567888874221 123444554443344333221
Q ss_pred cccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 340 LADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.++++||++++..++++++.+.++|+++
T Consensus 425 -----------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~ 452 (460)
T 3gju_A 425 -----------------------QGDILGFAPPLCLTREQADIVVSKTADA 452 (460)
T ss_dssp -----------------------SSCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred -----------------------CCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 1479999999888888887777777654
No 209
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.86 E-value=1e-21 Score=189.97 Aligned_cols=246 Identities=12% Similarity=0.051 Sum_probs=142.6
Q ss_pred CCCC-CCCC--CCCc-cCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhC-CCcEEEeccHHHHH-HHHHHh--c
Q psy12791 23 QWRS-QCVI--PPII-LSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEE-AKHGLCYSSGLGAV-TAVTHL--L 94 (393)
Q Consensus 23 ~~~~-~~~~--~p~~-~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~-~~~~i~~~~G~~al-~~~~~~--~ 94 (393)
.++| +++. ++++ .++.+.+++.+.+.....| .++++...++.+.+++.++ .++.+++++|++++ .++... +
T Consensus 58 ~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~~ar~~ 136 (453)
T 2cy8_A 58 VYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQY-AASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALRVARAF 136 (453)
T ss_dssp EEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCSS-CSSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHHHHHHH
T ss_pred EEEECcccHhhcccCCCCHHHHHHHHHHHHhCCCC-CCCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHHHHHHh
Confidence 4567 4554 5554 3445555443332222223 3456667777777777764 33455566667777 555441 3
Q ss_pred CCCCeEEEcCCCccchHHHHHHhc-------ccCCc------EEEeeCCCCHHHHHhhcC---CCCcEEEEecCCCCccc
Q psy12791 95 SAGDHIISGDDVYGGTYRYFAQVA-------PKIGL------EVDFVDLRKIENLIKYIK---PNTKMVWIENPTNPLMT 158 (393)
Q Consensus 95 ~~gd~vl~~~~~y~~~~~~~~~~~-------~~~g~------~v~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~ 158 (393)
..++.|++.+|+|++......... ...|+ .+..++..|++++++.+. +++++|+++..+|+||.
T Consensus 137 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~ 216 (453)
T 2cy8_A 137 TGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGV 216 (453)
T ss_dssp HCCCEEEEECC----------------------------CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSEHHHHT
T ss_pred hCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCCCCCCC
Confidence 345788888999986332111101 01243 355667679999998886 35677777666788999
Q ss_pred ccC----HHHHHHHHHhCCCcEEEEeCccCcccccCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHH
Q psy12791 159 VFD----VKAISAVVKQHPDILLVLDNTFLTAYYQKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARL 229 (393)
Q Consensus 159 ~~~----~~~l~~l~~~~~~~~livDea~~~~~~~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~ 229 (393)
+++ +++|.++|++| |++||+||+|+++..... .....|++ |+||+++ . |+|+||++++ +++++.+
T Consensus 217 ~~~~~~~l~~l~~l~~~~-g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~--s~sK~l~-~-G~~~G~v~~~-~~~~~~l 290 (453)
T 2cy8_A 217 TPVSDSFLREGAELARQY-GALFILDEVISGFRVGNHGMQALLDVQPDLT--CLAKASA-G-GLPGGILGGR-EDVMGVL 290 (453)
T ss_dssp EECCHHHHHHHHHHHHHT-TCEEEEECTTTTTTTCTTHHHHHHTCCCSEE--EEEGGGG-T-TSSCEEEEEC-HHHHTTS
T ss_pred cCCCHHHHHHHHHHHHHc-CCEEEEecCccccccCchhhhHHhCCCCcEE--EEChhhh-C-CcceEEEech-HHHHHHh
Confidence 887 99999999999 999999999985421111 11234654 8899994 4 8999999998 7887766
Q ss_pred HH---H--HHhcCCCCCHHHHHHHHhccCC-H-HHHHHHHHHHHHHHHHHHhh
Q psy12791 230 KF---L--QNSMGVVPSPFDCWLVTRGLKT-L-PCRLKEHERGSIEVAKFLES 275 (393)
Q Consensus 230 ~~---~--~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~l~~ 275 (393)
.. . ........++..+..+...++. + +...++..++.+.+.+.|++
T Consensus 291 ~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~ 343 (453)
T 2cy8_A 291 SRGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCAKINDLGQFAREAMNH 343 (453)
T ss_dssp SSCC---------CCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCceeCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 43 1 1111223456665554444433 2 22345555556666666654
No 210
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.86 E-value=5e-22 Score=191.86 Aligned_cols=314 Identities=10% Similarity=0.071 Sum_probs=181.1
Q ss_pred CCCCC-CCC--CCCCccC-CeeeeCCCCCCCCCccc--cCCCCchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHHH
Q psy12791 22 DQWRS-QCV--IPPIILS-TTFKQNTPGQPPQGFEY--SRSNNPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVTH 92 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~~~-~~~~~~~~~~~~~~~~y--~~~~~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~~ 92 (393)
..++| +++ .++++.. +.+.+++.+++.....| ..++++...++++.|+++++.. ..+++++|++|+ .++..
T Consensus 44 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~ 123 (448)
T 3dod_A 44 KEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKM 123 (448)
T ss_dssp CEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHH
T ss_pred CEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHH
Confidence 35667 444 4556543 44444443332222222 3345677889999999998644 455566667777 66655
Q ss_pred hcC----CC----CeEEEcCCCccchHHHHHHhcccCC------------cEEEeeCCCC----------------HHHH
Q psy12791 93 LLS----AG----DHIISGDDVYGGTYRYFAQVAPKIG------------LEVDFVDLRK----------------IENL 136 (393)
Q Consensus 93 ~~~----~g----d~vl~~~~~y~~~~~~~~~~~~~~g------------~~v~~~~~~d----------------~~~l 136 (393)
+.. +| |+|++.+++|++.... .....| ..+..++..+ ++++
T Consensus 124 ~~~~~~~~G~~~~~~vi~~~~~yhg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 200 (448)
T 3dod_A 124 AFQYWKNIGKPEKQKFIAMKNGYHGDTIG---AVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLREL 200 (448)
T ss_dssp HHHHHHHTTCTTCCEEEEEC--------------------------------CEEECCCCCTTSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCCCCEEEEECCCCCCccHH---HHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHHH
Confidence 443 44 9999999999763211 111111 1233444332 7888
Q ss_pred HhhcC---CCCcEEEEecCC-CCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-cCC-----CCCcCcEEEEc
Q psy12791 137 IKYIK---PNTKMVWIENPT-NPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-QKS-----LPWGVDIVLYS 202 (393)
Q Consensus 137 ~~~l~---~~~~~v~l~~p~-nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~-----~~~~~di~~~S 202 (393)
++.+. +++++|+++.++ |++|.+.+ +++|.++|++| |++||+||+|..+.. ... .....|++ +
T Consensus 201 e~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~-~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~--t 277 (448)
T 3dod_A 201 AQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTY-DVLMIVDEVATGFGRTGKMFACEHENVQPDLM--A 277 (448)
T ss_dssp HHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--E
T ss_pred HHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHh-CCEEEEeccccCCCcccchhhhhhcCCCCCEE--E
Confidence 88876 456788888887 99998876 99999999999 999999999985421 111 11234554 6
Q ss_pred ccccccCCCC-ceEEEEEecChHHHHHHHH-------HHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHH
Q psy12791 203 LTKYMNGHSD-VVMGATVTNDDSLQARLKF-------LQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKF 272 (393)
Q Consensus 203 ~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~ 272 (393)
+||.++ . | +|+||++++ +++++.+.. .........++..+..+...++.+. ...++..++.+.+.+.
T Consensus 278 ~sK~l~-~-G~~~ig~v~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~ 354 (448)
T 3dod_A 278 AGKGIT-G-GYLPIAVTFAT-EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFL 354 (448)
T ss_dssp ECGGGG-T-TSSCCEEEEEE-HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred eccccc-C-CcCceEEEEEC-HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 889994 3 8 699999998 888887643 1111223345666665555554322 2344445555555555
Q ss_pred Hhh---CCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHH----------HHHHHHHhcCccccccccCCccc
Q psy12791 273 LES---HPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAE----------ETRIFLESLLIFRCAESLGGIES 339 (393)
Q Consensus 273 l~~---~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~g~~~s 339 (393)
|++ ++.+..+ ++.|.++++.+..+.. ....+.+.+...++.+.++
T Consensus 355 l~~l~~~~~~~~~------------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---- 412 (448)
T 3dod_A 355 LQDLHALPHVGDI------------------RQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPL---- 412 (448)
T ss_dssp HHHHTTSTTEEEE------------------EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEE----
T ss_pred HHHHhcCCCeEEE------------------EeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEecc----
Confidence 543 3322211 2235688888853211 0234444443334333211
Q ss_pred cccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 340 LADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.++||+++++..++++++.+.++|+++
T Consensus 413 ------------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~ 439 (448)
T 3dod_A 413 ------------------------GDVIAFLPPLASTAEELSEMVAIMKQA 439 (448)
T ss_dssp ------------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ------------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 378999999888888777777777654
No 211
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.86 E-value=1.5e-20 Score=184.58 Aligned_cols=212 Identities=17% Similarity=0.116 Sum_probs=146.3
Q ss_pred HHHHHHHHHHhCCC-cEE-EeccHHHHH-HHHHHhc-------C-CCC------eEEEcCCCccchHHHHHHhcccCCc-
Q psy12791 62 RNLERCIASLEEAK-HGL-CYSSGLGAV-TAVTHLL-------S-AGD------HIISGDDVYGGTYRYFAQVAPKIGL- 123 (393)
Q Consensus 62 ~~lr~~la~~~~~~-~~i-~~~~G~~al-~~~~~~~-------~-~gd------~vl~~~~~y~~~~~~~~~~~~~~g~- 123 (393)
.++++.+++++|.+ +.+ ++++|++++ .++..+. + +|| .|+++.++|++ +...++..|.
T Consensus 151 ~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s----~~~~~~~~g~g 226 (515)
T 2jis_A 151 EEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYS----IQKGAAFLGLG 226 (515)
T ss_dssp HHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH----HHHHHHHTTSC
T ss_pred HHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHH----HHHHHHHcCCC
Confidence 45677799999986 444 455556665 4444432 2 575 78999999986 4455566666
Q ss_pred --EEEeeCCC-----CHHHHHhhcCC------CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccC
Q psy12791 124 --EVDFVDLR-----KIENLIKYIKP------NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQK 190 (393)
Q Consensus 124 --~v~~~~~~-----d~~~l~~~l~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~ 190 (393)
+++.+|.+ |++++++++.+ ++++|++++|+|+||.+.|+++|.++|+++ |+++++|++|+.+....
T Consensus 227 ~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~-g~~l~vD~a~~~~~~~~ 305 (515)
T 2jis_A 227 TDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRH-GLWLHVDAAWGGSVLLS 305 (515)
T ss_dssp GGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH-TCEEEEEETTGGGGGGC
T ss_pred CCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHc-CCeEEEehhhhhHHHhC
Confidence 88888875 78999998864 489999999999999999999999999999 99999999999876543
Q ss_pred C-----CC--CcCcEEEEcccccccCCCCceEEEEEecCh-HHHHHHHH-HHHhc-CC-------------------CCC
Q psy12791 191 S-----LP--WGVDIVLYSLTKYMNGHSDVVMGATVTNDD-SLQARLKF-LQNSM-GV-------------------VPS 241 (393)
Q Consensus 191 ~-----~~--~~~di~~~S~sK~~~G~~G~r~G~~~~~~~-~~~~~~~~-~~~~~-~~-------------------~~~ 241 (393)
+ +. .++|+++.|+||+++++.| +|+++++++ ++.+.... ...+. +. ...
T Consensus 306 ~~~~~~~~g~~~aD~v~~s~hK~l~~p~g--~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~ 383 (515)
T 2jis_A 306 QTHRHLLDGIQRADSVAWNPHKLLAAGLQ--CSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVD 383 (515)
T ss_dssp TTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCC
T ss_pred hhhHhhcCCCccCCEEEECcccccCCCCC--eeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCccc
Confidence 2 22 2679999999999965555 899999866 45554210 11100 00 011
Q ss_pred HHHHHHHHhcc--CCHHHHHHHHHHHHHHHHHHHhhCCCcc
Q psy12791 242 PFDCWLVTRGL--KTLPCRLKEHERGSIEVAKFLESHPCVK 280 (393)
Q Consensus 242 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 280 (393)
....+++.+.+ +.+....++..++++.+.+.|++.+++.
T Consensus 384 al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 424 (515)
T 2jis_A 384 CLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFE 424 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 22222222222 2344566677778888889998877654
No 212
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.86 E-value=4.3e-21 Score=185.43 Aligned_cols=317 Identities=12% Similarity=0.052 Sum_probs=194.0
Q ss_pred CCCC-CCC--CCCCcc-CCeeeeCCCCCCCCC-c-cccCCCCchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHHHh
Q psy12791 23 QWRS-QCV--IPPIIL-STTFKQNTPGQPPQG-F-EYSRSNNPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVTHL 93 (393)
Q Consensus 23 ~~~~-~~~--~~p~~~-~~~~~~~~~~~~~~~-~-~y~~~~~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~~~ 93 (393)
+++| +++ .++++- ++.+.+++.+++... + .++.++++...+|+++|+++++.. ..+++++|++++ .++..+
T Consensus 76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a 155 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMA 155 (457)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHH
T ss_pred EEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHH
Confidence 5678 555 567763 445554443322111 1 124556788899999999999754 455556667777 555544
Q ss_pred cC-------CC-CeEEEcCCCccchHHHHHHh----------cccCCcEEEeeCC-------CCHHHHHhhcC---CCCc
Q psy12791 94 LS-------AG-DHIISGDDVYGGTYRYFAQV----------APKIGLEVDFVDL-------RKIENLIKYIK---PNTK 145 (393)
Q Consensus 94 ~~-------~g-d~vl~~~~~y~~~~~~~~~~----------~~~~g~~v~~~~~-------~d~~~l~~~l~---~~~~ 145 (393)
.. +| +.|++.+++|++........ .......+..++. .|++++++.++ ++++
T Consensus 156 ~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~a 235 (457)
T 3tfu_A 156 LQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELA 235 (457)
T ss_dssp HHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEE
T ss_pred HHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEE
Confidence 43 55 48899999997643211111 1111112333333 26788888886 5688
Q ss_pred EEEEec-CCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-cCCC-----CCcCcEEEEcccccccCCCCce
Q psy12791 146 MVWIEN-PTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-QKSL-----PWGVDIVLYSLTKYMNGHSDVV 214 (393)
Q Consensus 146 ~v~l~~-p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~~-----~~~~di~~~S~sK~~~G~~G~r 214 (393)
+|+++. ++|++|.+++ +++|.++|+++ |++||+||+|..+.. .... ....|++ ||||.++ ...+|
T Consensus 236 avi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~-gillI~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~-gG~~~ 311 (457)
T 3tfu_A 236 AVVVEPVVQGAGGMRFHDPRYLHDLRDICRRY-EVLLIFDEIATGFGRTGALFAADHAGVSPDIM--CVGKALT-GGYLS 311 (457)
T ss_dssp EEEECSSEECTTTCEECCTHHHHHHHHHHHHH-TCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGG-TTSSC
T ss_pred EEEEeCCCcCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEcCccCCccccchhHhHhcCCCceEE--EEChhhh-CCCcc
Confidence 899988 9999999987 99999999999 999999999986421 1111 1235666 8899984 32269
Q ss_pred EEEEEecChHHHHHHHHH-----HHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhC---CCcceEeC
Q psy12791 215 MGATVTNDDSLQARLKFL-----QNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLESH---PCVKGVLH 284 (393)
Q Consensus 215 ~G~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~---~~~~~v~~ 284 (393)
+||++++ +++++.+... ........++..+..+...++.+. ...++..+..+.+.+.|+++ +.+..+
T Consensus 312 lG~v~~~-~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-- 388 (457)
T 3tfu_A 312 LAATLCT-ADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDV-- 388 (457)
T ss_dssp CEEEEEE-HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEE--
T ss_pred eEEEEEc-HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeee--
Confidence 9999998 8888877421 111122345666655555443221 23455555666667777643 222211
Q ss_pred CCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCC
Q psy12791 285 PGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITD 364 (393)
Q Consensus 285 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~ 364 (393)
++.|.+++|.+... .....+.+.+...++.+.. ..
T Consensus 389 ----------------r~~G~~~~i~l~~~-~~~~~~~~~l~~~Gv~v~~----------------------------~~ 423 (457)
T 3tfu_A 389 ----------------RVCGAIGVIECDRP-VDLAVATPAALDRGVWLRP----------------------------FR 423 (457)
T ss_dssp ----------------EECSSCEEEEESSC-CCHHHHHHHHHHTTEECCC----------------------------BT
T ss_pred ----------------ecCCeEEEEEECCc-ccHHHHHHHHHHCCeEEEe----------------------------cC
Confidence 22367888888532 1234454544433433321 03
Q ss_pred CeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 365 NLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 365 ~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
+++|+++++..++++++.+.++|+++.
T Consensus 424 ~~lRi~p~~~~t~eei~~~l~~L~~~l 450 (457)
T 3tfu_A 424 NLVYAMPPYICTPAEITQITSAMVEVA 450 (457)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 689999998888888888888777653
No 213
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.86 E-value=8e-22 Score=189.23 Aligned_cols=313 Identities=13% Similarity=0.075 Sum_probs=189.9
Q ss_pred CCCCC-CCCC--CCCcc-CCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCCc-EEEeccHHHHH-HHHHH--h
Q psy12791 22 DQWRS-QCVI--PPIIL-STTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAKH-GLCYSSGLGAV-TAVTH--L 93 (393)
Q Consensus 22 ~~~~~-~~~~--~p~~~-~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~~-~i~~~~G~~al-~~~~~--~ 93 (393)
.+++| +++. +|++. ++.+.+++.+.+.....|+ ++++...+|++.++++++..+ .+++++|++++ .++.. .
T Consensus 52 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~ 130 (427)
T 3fq8_A 52 NRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSFG-APCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRA 130 (427)
T ss_dssp CEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCCS-SCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCCcC-CCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHH
Confidence 45677 5554 67764 5555555443332222233 367888999999999986444 44555556667 55522 2
Q ss_pred cCCCCeEEEcCCCccchHHHHHHhccc-------------CC------cEEEeeCCCCHHHHHhhcCC---CCcEEEEec
Q psy12791 94 LSAGDHIISGDDVYGGTYRYFAQVAPK-------------IG------LEVDFVDLRKIENLIKYIKP---NTKMVWIEN 151 (393)
Q Consensus 94 ~~~gd~vl~~~~~y~~~~~~~~~~~~~-------------~g------~~v~~~~~~d~~~l~~~l~~---~~~~v~l~~ 151 (393)
...+++|++.+++|++... ..... .| ..+..++.+|++++++.+.+ ++++|+++.
T Consensus 131 ~~~~~~vi~~~~~yhg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p 207 (427)
T 3fq8_A 131 YTGRDKIIKFEGCYHGHAD---MFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEP 207 (427)
T ss_dssp HHCCCEEEEEETCCCCSCG---GGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECS
T ss_pred hhCCCEEEEECCCcCCCCH---HHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcC
Confidence 2345789999999875321 11111 11 12566677789999988864 578888888
Q ss_pred CCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccccC-----CCCCcCcEEEEcccccccCCCCceEEEEEecC
Q psy12791 152 PTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQK-----SLPWGVDIVLYSLTKYMNGHSDVVMGATVTND 222 (393)
Q Consensus 152 p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~~-----~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~ 222 (393)
++|++|.+.+ +++|.++|++| |++||+||+|+++.... ......|+ .|+||.+ | +|+|+||++++
T Consensus 208 ~~~~~G~~~~~~~~l~~l~~l~~~~-~~~li~DEv~~g~~~g~~~~~~~~~~~~di--~t~sK~~-~-~G~~~G~~~~~- 281 (427)
T 3fq8_A 208 IVGNSGFIVPDAGFLEGLREITLEH-DALLVFDEVITGFRIAYGGVQEKFGVTPDL--TTLGKII-G-GGLPVGAYGGK- 281 (427)
T ss_dssp SBCTTSCBCCCTTHHHHHHHHHHHT-TCEEEEECTTTBTTTBTTHHHHHTTCCCSE--EEECGGG-G-TTSSCEEEEEC-
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccccccCcchhhHhcCCCCCh--hhhhhhh-h-CCcceEEEEEc-
Confidence 8999999999 99999999999 99999999998541111 11123454 5788999 4 69999999997
Q ss_pred hHHHHHHHHHHH-hcCC--CCCHHHHHHHHhccCCH--HHHHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcch
Q psy12791 223 DSLQARLKFLQN-SMGV--VPSPFDCWLVTRGLKTL--PCRLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNH 293 (393)
Q Consensus 223 ~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~ 293 (393)
+++++.+..... ..+. ..++..+..+...++.+ +...++..++.+.+.+.|++ ++....+
T Consensus 282 ~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----------- 350 (427)
T 3fq8_A 282 REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACG----------- 350 (427)
T ss_dssp HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-----------
T ss_pred HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEE-----------
Confidence 888876653211 1121 23566655544433211 22344555555555555543 2211111
Q ss_pred HHHhhhcCCCcceEEEEEcC------------CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcC
Q psy12791 294 ELAKSQWSGTSGMLSFYVNG------------GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALG 361 (393)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g 361 (393)
++.+.++++.+.. +......+.+.+...++.+..++
T Consensus 351 -------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~------------------------- 398 (427)
T 3fq8_A 351 -------GQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQ------------------------- 398 (427)
T ss_dssp -------EEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSST-------------------------
T ss_pred -------EEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCC-------------------------
Confidence 1235677777632 12234455555544444443321
Q ss_pred CCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 362 ITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 362 ~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
..|++++...++++++.+.++|+++.
T Consensus 399 ----~~r~~~~~~~t~e~i~~~l~~l~~~l 424 (427)
T 3fq8_A 399 ----FEAGFTSLAHTEEDIDATLAAARTVM 424 (427)
T ss_dssp ----TSCEECCTTCCHHHHHHHHHHHHHHH
T ss_pred ----CCCEEeeCcCCHHHHHHHHHHHHHHH
Confidence 11566777888888888888887653
No 214
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.86 E-value=3.2e-21 Score=180.15 Aligned_cols=282 Identities=14% Similarity=0.093 Sum_probs=188.2
Q ss_pred chHHHHHHHHHHHhCCC--cEEEe-ccH-HHHH-HHHHHhcCC--CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC
Q psy12791 59 PTRRNLERCIASLEEAK--HGLCY-SSG-LGAV-TAVTHLLSA--GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~--~~i~~-~~G-~~al-~~~~~~~~~--gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~ 131 (393)
...++.|+.+++++|++ +.|++ ++| +.++ .++..++.+ ||++++...++.+. .+...++..|..++.++.+
T Consensus 58 ~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~--~~~~~a~~~G~~~~~~~~~ 135 (377)
T 3e77_A 58 KIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSA--KAAEEAKKFGTINIVHPKL 135 (377)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHH--HHHHHHTTTSEEEECSCCC
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHH--HHHHHHHHhCCceEEeccC
Confidence 45678999999999986 35665 555 4457 777777765 89998877766553 3556778889988887764
Q ss_pred -----CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCC-cCcEEEEcccc
Q psy12791 132 -----KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPW-GVDIVLYSLTK 205 (393)
Q Consensus 132 -----d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~-~~di~~~S~sK 205 (393)
++++++..++++|++|.+++..|.||.++|+ +++++ |+++++|.+++.+.. |++. ..++++.|.+|
T Consensus 136 ~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi-----i~~~~-~~~~~vD~~q~~g~~--~id~~~~~~~~~s~~K 207 (377)
T 3e77_A 136 GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF-----IPDVK-GAVLVCDMSSNFLSK--PVDVSKFGVIFAGAQK 207 (377)
T ss_dssp SSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS-----CCCCT-TCCEEEECTTTTTSS--CCCGGGCSEEEEEGGG
T ss_pred CCcCCCCChHHhccCCCccEEEEeCccCchheEchh-----hhccC-CCEEEEEcccccCCC--CCchhhcCEEEEeccc
Confidence 4566777788889999999999999999998 47788 999999999997654 4442 23478899999
Q ss_pred cccCCCCceEEEEEecChHHHHHHH----------HHH--HhcCCCCCHHHHHHHHhccC------CHHHHHHHHHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLK----------FLQ--NSMGVVPSPFDCWLVTRGLK------TLPCRLKEHERGSI 267 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~----------~~~--~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 267 (393)
++ ||+| +|+++.+ +++.+++. ... .....+++....+.+..+++ .++.+.++..+..+
T Consensus 208 ~~-gp~G--~g~l~~~-~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~ 283 (377)
T 3e77_A 208 NV-GSAG--VTVVIVR-DDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQ 283 (377)
T ss_dssp TT-SCTT--CEEEEEE-TTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cc-CCCc--cEEEEEc-HHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 99 7999 8888887 44432211 111 01122333333332222222 24455566667778
Q ss_pred HHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC---CHHHHHHHHHhcCccccccccCCccccccCc
Q psy12791 268 EVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG---GAEETRIFLESLLIFRCAESLGGIESLADLP 344 (393)
Q Consensus 268 ~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~ 344 (393)
.+.+.|++.+++. + .+. .+. ...+.++.|.+++ +.+....+++.+...++.+..|..
T Consensus 284 ~l~~~L~~~~g~~-~-~~~---~~~--------~rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~------- 343 (377)
T 3e77_A 284 TIYEIIDNSQGFY-V-CPV---EPQ--------NRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHR------- 343 (377)
T ss_dssp HHHHHHHTSTTSE-E-CCS---CGG--------GBCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCT-------
T ss_pred HHHHHHHhcCCce-e-cCC---CHH--------HcCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCC-------
Confidence 8888888777653 1 111 000 0113468999964 132224566665544554433210
Q ss_pred ccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 345 AEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
..+.+|+|++.++++++++.+.++|+++.+
T Consensus 344 ------------------~~g~iRiS~~~~~t~edId~l~~al~~~~~ 373 (377)
T 3e77_A 344 ------------------SVGGIRASLYNAVTIEDVQKLAAFMKKFLE 373 (377)
T ss_dssp ------------------TTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred ------------------cCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 135699999999999999999999998753
No 215
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.86 E-value=1.2e-21 Score=187.91 Aligned_cols=312 Identities=15% Similarity=0.102 Sum_probs=188.4
Q ss_pred CCCC-CCCC--CCCcc-CCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhC-CCcEEEeccHHHHH-HHHHH--hc
Q psy12791 23 QWRS-QCVI--PPIIL-STTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEE-AKHGLCYSSGLGAV-TAVTH--LL 94 (393)
Q Consensus 23 ~~~~-~~~~--~p~~~-~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~-~~~~i~~~~G~~al-~~~~~--~~ 94 (393)
.++| +++. ++++. ++.+.+++.+.+.....| .++.+...++++.++++++ .++.+++++|++++ .++.. .+
T Consensus 53 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~~ 131 (424)
T 2e7u_A 53 RYLDYVMSWGPLILGHAHPKVLARVRETLERGLTF-GAPSPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARGY 131 (424)
T ss_dssp EEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCC-SSCCHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEccccccccccCCCCHHHHHHHHHHHHhCCCC-CCCCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHh
Confidence 4567 5554 56654 555655554432222223 3456778999999999984 44555666677777 55543 23
Q ss_pred CCCCeEEEcCCCccchHHHHHHhc----------ccCCc------EEEeeCCCCHHHHHhhcC---CCCcEEEEecCCC-
Q psy12791 95 SAGDHIISGDDVYGGTYRYFAQVA----------PKIGL------EVDFVDLRKIENLIKYIK---PNTKMVWIENPTN- 154 (393)
Q Consensus 95 ~~gd~vl~~~~~y~~~~~~~~~~~----------~~~g~------~v~~~~~~d~~~l~~~l~---~~~~~v~l~~p~n- 154 (393)
.+++.|++.+|+|++......... ...|+ ++..++..|++++++.+. +++++|++ +|+|
T Consensus 132 ~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~-ep~~~ 210 (424)
T 2e7u_A 132 TGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIF-EPVVG 210 (424)
T ss_dssp HCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEE-CSSBC
T ss_pred hCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEE-eCCCC
Confidence 456789999999986321110000 01232 466777779999998886 34555555 5554
Q ss_pred CcccccC----HHHHHHHHHhCCCcEEEEeCccCcccccCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHH
Q psy12791 155 PLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSL 225 (393)
Q Consensus 155 ptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~ 225 (393)
+||.+++ +++|.++ ++| |++||+||+|+++..... .....|++ |+||++ | +|+|+||++++ +++
T Consensus 211 ~~G~~~~~~~~l~~l~~l-~~~-g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~--s~sK~l-~-~G~~~G~~~~~-~~~ 283 (424)
T 2e7u_A 211 NAGVLVPTEDFLKALHEA-KAY-GVLLIADEVMTGFRLAFGGATELLGLKPDLV--TLGKIL-G-GGLPAAAYAGR-REI 283 (424)
T ss_dssp TTSCBCCCHHHHHHHHHG-GGG-TCEEEEECTTTTTTSSTTHHHHHHTCCCSEE--EECGGG-G-TTSSCEEEEEC-HHH
T ss_pred CCCCcCCCHHHHHHHHHH-HHc-CCEEEEecCccccccchhHHHHHhCCCcchh--hhhhhh-h-CCcceEEEEEc-HHH
Confidence 4898887 9999999 999 999999999996421111 11234654 889999 4 48999999998 787
Q ss_pred HHHHHHHHH-hc--CCCCCHHHHHHHHhccCCHH---HHHHHHHHHHHHHHHHHhhC----CCcceEeCCCCCCCcchHH
Q psy12791 226 QARLKFLQN-SM--GVVPSPFDCWLVTRGLKTLP---CRLKEHERGSIEVAKFLESH----PCVKGVLHPGLPSHPNHEL 295 (393)
Q Consensus 226 ~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~----~~~~~v~~~~l~~~~~~~~ 295 (393)
++.+..... .. ....++..+..+...++.+. ...++..++.+.+.+.|++. +.+..+
T Consensus 284 ~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------- 350 (424)
T 2e7u_A 284 MEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTV------------- 350 (424)
T ss_dssp HTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-------------
T ss_pred HhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEE-------------
Confidence 776643111 11 11345666555554444332 24555566666666666542 221111
Q ss_pred HhhhcCCCcceEEEEEcC------------CHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCC
Q psy12791 296 AKSQWSGTSGMLSFYVNG------------GAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGIT 363 (393)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~ 363 (393)
.+.|.++++.+.+ +......+.+.+...++.+..++
T Consensus 351 -----~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--------------------------- 398 (424)
T 2e7u_A 351 -----NRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSN--------------------------- 398 (424)
T ss_dssp -----EEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSS---------------------------
T ss_pred -----EeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccC---------------------------
Confidence 1235788888843 12345566666655555554432
Q ss_pred CCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 364 DNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 364 ~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
...+| ++...++++++.+.++|+++
T Consensus 399 ~~~~~--~~~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 399 FEAAF--LSVAHREEDVEKTLEALRKA 423 (424)
T ss_dssp SSCEE--CCTTCCHHHHHHHHHHHHHH
T ss_pred CCceE--eeccCCHHHHHHHHHHHHHh
Confidence 11244 45678888888888888754
No 216
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.86 E-value=1.8e-20 Score=181.95 Aligned_cols=287 Identities=13% Similarity=0.116 Sum_probs=190.2
Q ss_pred CchHHHHHHHH----HHHhCCC-----------cEEEeccHHHHH-HHHHHhc-------------------CCCCeEEE
Q psy12791 58 NPTRRNLERCI----ASLEEAK-----------HGLCYSSGLGAV-TAVTHLL-------------------SAGDHIIS 102 (393)
Q Consensus 58 ~~~~~~lr~~l----a~~~~~~-----------~~i~~~~G~~al-~~~~~~~-------------------~~gd~vl~ 102 (393)
.|...++++.+ ++++|.+ ..+++++|++++ .++.+.. .+++.|++
T Consensus 108 ~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~ 187 (475)
T 3k40_A 108 SPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYC 187 (475)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEE
Confidence 57777777765 6677776 357777778885 4444321 13468999
Q ss_pred cCCCccchHHHHHHhcccCCcEEEeeCCC----CHHHHHhhcCCC------CcEEEEecCCCCcccccCHHHHHHHHHhC
Q psy12791 103 GDDVYGGTYRYFAQVAPKIGLEVDFVDLR----KIENLIKYIKPN------TKMVWIENPTNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 103 ~~~~y~~~~~~~~~~~~~~g~~v~~~~~~----d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~ 172 (393)
+..+|.+ +.+.++..|++++.+|.+ |++++++++.++ +.+|++++++|+||.+.|+++|.++|+++
T Consensus 188 s~~~H~s----~~~~~~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~ 263 (475)
T 3k40_A 188 SDQAHSS----VERAGLLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKH 263 (475)
T ss_dssp ETTSCHH----HHHHHHHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHT
T ss_pred CCCchHH----HHHHHHHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHh
Confidence 9999986 455667789999999985 899999988654 56788899999999999999999999999
Q ss_pred CCcEEEEeCccCcccccCC----CC---CcCcEEEEcccccccCCCCceEEEEEecChHHH-HHHHHHHHhcCC------
Q psy12791 173 PDILLVLDNTFLTAYYQKS----LP---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQ-ARLKFLQNSMGV------ 238 (393)
Q Consensus 173 ~~~~livDea~~~~~~~~~----~~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~-~~~~~~~~~~~~------ 238 (393)
|+++++|++|+.+....+ .. ..+|.++.|+||+++++.| +|+++.+++... +.+.....+...
T Consensus 264 -~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g--~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~ 340 (475)
T 3k40_A 264 -NLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFD--CSAMWLKDPSWVVNAFNVDPLYLKHDMQGSA 340 (475)
T ss_dssp -TCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESSGGGC-------------------
T ss_pred -CCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCc--eEEEEEeCHHHHHHHhcCCccccCCCcCCCC
Confidence 999999999987543211 11 1369999999999976777 788887766543 222211111000
Q ss_pred --------CC----CHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCc
Q psy12791 239 --------VP----SPFDCWLVTRG--LKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTS 304 (393)
Q Consensus 239 --------~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~ 304 (393)
.. .....+.+++. .+.+...+++..++++.+.+.|++.++++.+ .+. ..
T Consensus 341 ~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~-~~~----------------~~ 403 (475)
T 3k40_A 341 PDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELA-AEI----------------NM 403 (475)
T ss_dssp --------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEES-SCC----------------BT
T ss_pred CCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe-cCC----------------ce
Confidence 00 12222333222 2345667777888889999999988776522 111 14
Q ss_pred ceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC-ChHHHHHHH
Q psy12791 305 GMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE-GYTDLIADL 383 (393)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~-~~~~~i~~l 383 (393)
+++.|.+++.......+.+.+...+..... +... ....++|++++.. +++++++.+
T Consensus 404 ~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~---------~~~~--------------~g~~~lR~~~~~~~tt~~di~~~ 460 (475)
T 3k40_A 404 GLVCFRLKGSNERNEALLKRINGRGHIHLV---------PAKI--------------KDVYFLRMAICSRFTQSEDMEYS 460 (475)
T ss_dssp TEEEEEESSCHHHHHHHHHHHHHHTSCBCE---------EEEE--------------TTEEEEEEECCCTTCCHHHHHHH
T ss_pred EEEEEEeCCchHHHHHHHHHHHhCCcEEEE---------eeEE--------------CCEEEEEEEeCCCCCCHHHHHHH
Confidence 688898865555667777776543221100 0000 0146899998754 578888888
Q ss_pred HHHHHHhh
Q psy12791 384 DQALRKAC 391 (393)
Q Consensus 384 ~~al~~~~ 391 (393)
.++|+++.
T Consensus 461 ~~~i~~~~ 468 (475)
T 3k40_A 461 WKEVSAAA 468 (475)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887654
No 217
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.86 E-value=2.2e-21 Score=186.26 Aligned_cols=316 Identities=12% Similarity=0.087 Sum_probs=186.4
Q ss_pred CCCCC-CCCC--CCCcc-CCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHhCCC-cEEEeccHHHHH-HHHHHh--
Q psy12791 22 DQWRS-QCVI--PPIIL-STTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLEEAK-HGLCYSSGLGAV-TAVTHL-- 93 (393)
Q Consensus 22 ~~~~~-~~~~--~p~~~-~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~~~~-~~i~~~~G~~al-~~~~~~-- 93 (393)
..++| +++. ++++. ++.+.+++.+.+.....| .|+++...+|+++++++++.. ..+++++|++++ .++...
T Consensus 53 ~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~ 131 (429)
T 4e77_A 53 KAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSF-GAPTEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARG 131 (429)
T ss_dssp CEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCC-SSCCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEECCCchhccccCCCCHHHHHHHHHHHHhCccc-CCCCHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHH
Confidence 45677 5544 56653 455555544433332222 256788999999999998634 455566667777 555422
Q ss_pred cCCCCeEEEcCCCccchHHHHH----------HhcccCC------cEEEeeCCCCHHHHHhhcC---CCCcEEEEecCCC
Q psy12791 94 LSAGDHIISGDDVYGGTYRYFA----------QVAPKIG------LEVDFVDLRKIENLIKYIK---PNTKMVWIENPTN 154 (393)
Q Consensus 94 ~~~gd~vl~~~~~y~~~~~~~~----------~~~~~~g------~~v~~~~~~d~~~l~~~l~---~~~~~v~l~~p~n 154 (393)
...++.|++.++.|++...... ......| ..+..++.+|++++++.+. +++++|+++..++
T Consensus 132 ~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~ 211 (429)
T 4e77_A 132 YTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAG 211 (429)
T ss_dssp HHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBC
T ss_pred hhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccC
Confidence 2456789999999887432100 0001111 2456667778999998886 3456666555555
Q ss_pred CcccccC----HHHHHHHHHhCCCcEEEEeCccCcccccCC-----CCCcCcEEEEcccccccCCCCceEEEEEecChHH
Q psy12791 155 PLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQKS-----LPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSL 225 (393)
Q Consensus 155 ptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~~~-----~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~ 225 (393)
++|.+.+ +++|.++|+++ |++||+||+|.++..... .....|++ |+||.+ | +|+|+||++++ +++
T Consensus 212 ~~g~~~~~~~~l~~l~~l~~~~-~~lli~DEv~~g~r~g~~~~~~~~~~~pdi~--t~sK~~-~-~G~~~G~~~~~-~~~ 285 (429)
T 4e77_A 212 NMNCIPPLPEFLPGLRALCDEF-GALLIIDEVMTGFRVALAGAQDYYHVIPDLT--CLGKII-G-GGMPVGAFGGR-REV 285 (429)
T ss_dssp TTSCBCCCTTHHHHHHHHHHHH-TCEEEEEETTTBTTTBTTCHHHHTTCCCSEE--EEEGGG-G-TTSCCEEEEEC-HHH
T ss_pred CCCCcCCCHHHHHHHHHHHHHc-CCEEEEeccccCcccCcchHHHhcCCCCCee--eecccc-c-CCCCeEEEEEC-HHH
Confidence 6677777 99999999999 999999999995411111 11234654 889999 4 58999999997 888
Q ss_pred HHHHHHHH---HhcCCCCCHHHHHHHHhccCCH--HHHHHHHHHHHHHHHHHHhh----CCCcceEeCCCCCCCcchHHH
Q psy12791 226 QARLKFLQ---NSMGVVPSPFDCWLVTRGLKTL--PCRLKEHERGSIEVAKFLES----HPCVKGVLHPGLPSHPNHELA 296 (393)
Q Consensus 226 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~----~~~~~~v~~~~l~~~~~~~~~ 296 (393)
++.+.... .......++..+..+...++.+ +...++..++.+.+.+.|++ ++.+..+
T Consensus 286 ~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-------------- 351 (429)
T 4e77_A 286 MNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVV-------------- 351 (429)
T ss_dssp HTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEE--------------
T ss_pred HHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEE--------------
Confidence 77665321 1112234566655444443211 22344455555555555543 2221111
Q ss_pred hhhcCCCcceEEEEEcCC-------------HHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCC
Q psy12791 297 KSQWSGTSGMLSFYVNGG-------------AEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGIT 363 (393)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~ 363 (393)
++.|.++++.+.+. ......+.+.+...++.+..++
T Consensus 352 ----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--------------------------- 400 (429)
T 4e77_A 352 ----NHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYLAPSA--------------------------- 400 (429)
T ss_dssp ----EEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEECCSST---------------------------
T ss_pred ----EEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHCCeEEeecC---------------------------
Confidence 22367788887532 1334556666554455544332
Q ss_pred CCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 364 DNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 364 ~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
... ++++...++++++.+.++|+++.
T Consensus 401 ~~~--~~~~~~~t~e~i~~~l~~l~~~l 426 (429)
T 4e77_A 401 FEA--GFMSLAHSNEDIQKTVNAARRCF 426 (429)
T ss_dssp TSC--EECCTTCCHHHHHHHHHHHHHHH
T ss_pred CCC--EEEeccCCHHHHHHHHHHHHHHH
Confidence 122 44556778888888888887664
No 218
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.85 E-value=2.2e-20 Score=181.67 Aligned_cols=288 Identities=15% Similarity=0.145 Sum_probs=192.8
Q ss_pred CCchHHHHHHHH----HHHhCCCc------------EEEeccHHHHH-HHHHHhc-------------------CCCCeE
Q psy12791 57 NNPTRRNLERCI----ASLEEAKH------------GLCYSSGLGAV-TAVTHLL-------------------SAGDHI 100 (393)
Q Consensus 57 ~~~~~~~lr~~l----a~~~~~~~------------~i~~~~G~~al-~~~~~~~-------------------~~gd~v 100 (393)
..|...++++.+ ++++|.++ .+++++|+.++ .++.+.. .+++.|
T Consensus 112 ~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v 191 (481)
T 4e1o_A 112 SSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVA 191 (481)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEE
T ss_pred CCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEE
Confidence 357777787766 55577652 36777778885 5444321 256789
Q ss_pred EEcCCCccchHHHHHHhcccCCcEEEeeCCC-----CHHHHHhhcCCC------CcEEEEecCCCCcccccCHHHHHHHH
Q psy12791 101 ISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-----KIENLIKYIKPN------TKMVWIENPTNPLMTVFDVKAISAVV 169 (393)
Q Consensus 101 l~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-----d~~~l~~~l~~~------~~~v~l~~p~nptG~~~~~~~l~~l~ 169 (393)
+++..+|.+ +.+.++..|.+++.+|.+ |+++|++++.++ +.+|++++++|+||.+.|+++|.++|
T Consensus 192 ~~s~~~H~s----~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la 267 (481)
T 4e1o_A 192 YASDQAHSS----VEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPIC 267 (481)
T ss_dssp EEETTSCHH----HHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHH
T ss_pred EEcCcchHH----HHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHH
Confidence 999999986 455566789999999975 899999998653 67788899999999999999999999
Q ss_pred HhCCCcEEEEeCccCcccccCC----CCC---cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHH-HHHhc-----
Q psy12791 170 KQHPDILLVLDNTFLTAYYQKS----LPW---GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKF-LQNSM----- 236 (393)
Q Consensus 170 ~~~~~~~livDea~~~~~~~~~----~~~---~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~-~~~~~----- 236 (393)
+++ |+++++|++|+.+....+ ... .+|.++.++||+++++.| .|+++.+++........ ...+.
T Consensus 268 ~~~-~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g--~g~l~~~~~~~l~~~~~~~~~yl~~~~~ 344 (481)
T 4e1o_A 268 ARE-GLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFD--CTGFWVKDKYKLQQTFSVNPIYLRHANS 344 (481)
T ss_dssp HHH-TCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESBHHHHHTTTCCCCGGGCCTTT
T ss_pred HHc-CCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCc--eEEEEEeCHHHHHHHhcCCchhccCccc
Confidence 999 999999999987543211 111 359999999999977777 77777776665432110 00110
Q ss_pred -------------CCCCCHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcC
Q psy12791 237 -------------GVVPSPFDCWLVTR--GLKTLPCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWS 301 (393)
Q Consensus 237 -------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~ 301 (393)
+........+.+++ +.+.+..++++..++++.+.+.|++.|+++.+..+.
T Consensus 345 ~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~--------------- 409 (481)
T 4e1o_A 345 GVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRH--------------- 409 (481)
T ss_dssp TTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCC---------------
T ss_pred CCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCc---------------
Confidence 00112233333333 234466677888888999999999887754221111
Q ss_pred CCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC-ChHHHH
Q psy12791 302 GTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE-GYTDLI 380 (393)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~-~~~~~i 380 (393)
.++++|.+++.......+.+.+...+..... +... ....++|++++.. ++++++
T Consensus 410 --~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~---------~~~~--------------~g~~~lR~~~~~~~tt~~di 464 (481)
T 4e1o_A 410 --LGLVVFRLKGPNSLTENVLKEIAKAGRLFLI---------PATI--------------QDKLIIRFTVTSQFTTRDDI 464 (481)
T ss_dssp --SSEEEEEESSCHHHHHHHHHHHHHHCSSBCE---------EEEE--------------TTEEEEEEECCCTTCCHHHH
T ss_pred --eeEEEEEeCCchHHHHHHHHHHHhCCeEEEE---------eeEE--------------CCEEEEEEEeCCCCCCHHHH
Confidence 3688998865555667777776543211100 0000 0146899998755 578888
Q ss_pred HHHHHHHHHhh
Q psy12791 381 ADLDQALRKAC 391 (393)
Q Consensus 381 ~~l~~al~~~~ 391 (393)
+.+.++|+++.
T Consensus 465 ~~~~~~i~~~~ 475 (481)
T 4e1o_A 465 LRDWNLIRDAA 475 (481)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888887654
No 219
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.85 E-value=5.2e-21 Score=185.81 Aligned_cols=320 Identities=14% Similarity=0.075 Sum_probs=194.3
Q ss_pred CCCCC-CCC--CCCCcc-CCeeeeCCCCCCCCC-cccc-CCCCchHHHHHHHHHHHhCC--CcEEEeccHHHHH-HHHHH
Q psy12791 22 DQWRS-QCV--IPPIIL-STTFKQNTPGQPPQG-FEYS-RSNNPTRRNLERCIASLEEA--KHGLCYSSGLGAV-TAVTH 92 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~~-~~~~~~~~~~~~~~~-~~y~-~~~~~~~~~lr~~la~~~~~--~~~i~~~~G~~al-~~~~~ 92 (393)
..++| +++ .++++. ++.+.+++.+++... +.++ .++++...+|++.|+++++. +..+++++|++|+ .++..
T Consensus 54 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~ 133 (476)
T 3i5t_A 54 RRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRF 133 (476)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHH
T ss_pred CEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHH
Confidence 35677 666 677764 445555443332211 2222 45678889999999998863 3556666677777 55554
Q ss_pred hc--------CCCCeEEEcCCCccchHHHHHHhcc-----------cCCcEEEeeCC-----C-C--------HHHHHhh
Q psy12791 93 LL--------SAGDHIISGDDVYGGTYRYFAQVAP-----------KIGLEVDFVDL-----R-K--------IENLIKY 139 (393)
Q Consensus 93 ~~--------~~gd~vl~~~~~y~~~~~~~~~~~~-----------~~g~~v~~~~~-----~-d--------~~~l~~~ 139 (393)
+. ..++.|++.++.|++.......... ..+...+..|. + + ++++++.
T Consensus 134 a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~ 213 (476)
T 3i5t_A 134 SEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDR 213 (476)
T ss_dssp HHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHH
Confidence 43 3357899999999864322111100 11223333332 1 1 6788887
Q ss_pred cC----CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-cC------CCCCcCcEEEEccc
Q psy12791 140 IK----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-QK------SLPWGVDIVLYSLT 204 (393)
Q Consensus 140 l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~------~~~~~~di~~~S~s 204 (393)
+. +++++|+++.++|++|.+.+ +++|.++|+++ |++||+||+|..+.. .. ......|++ +++
T Consensus 214 i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~-gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~--t~s 290 (476)
T 3i5t_A 214 IESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKH-DILYISDEVVTGFGRCGEWFASEKVFGVVPDII--TFA 290 (476)
T ss_dssp HHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEE--EEC
T ss_pred HHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEecccCCccccCceeeecccCCCcchh--hhh
Confidence 75 45788998999999998665 99999999999 999999999986421 11 122235666 578
Q ss_pred ccccCCCC-ceEEEEEecChHHHHHHHHH-------HHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHh
Q psy12791 205 KYMNGHSD-VVMGATVTNDDSLQARLKFL-------QNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLE 274 (393)
Q Consensus 205 K~~~G~~G-~r~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~ 274 (393)
|.++| | +|+|+++++ +++++.+... ........++..+..+...++.+. ...++..++.+.+.+.|+
T Consensus 291 K~l~~--G~~plg~v~~~-~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~ 367 (476)
T 3i5t_A 291 KGVTS--GYVPLGGLAIS-EAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALA 367 (476)
T ss_dssp GGGGT--TSSCCEEEEEC-HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred hhhcC--CCcCeEEEEEC-HHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99953 8 899999997 8888876532 111223446777666665554332 235555666677777776
Q ss_pred hCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHH----------HHHHHHHhcCccccccccCCccccccCc
Q psy12791 275 SHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAE----------ETRIFLESLLIFRCAESLGGIESLADLP 344 (393)
Q Consensus 275 ~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~g~~~s~~~~~ 344 (393)
.+... |. +...++.|.++.+.+..+.. ....+.+.+...++.+..
T Consensus 368 ~l~~~-----~~----------v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~---------- 422 (476)
T 3i5t_A 368 SLRDL-----PG----------VAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRP---------- 422 (476)
T ss_dssp TTTTS-----TT----------EEEEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEE----------
T ss_pred HHhcC-----CC----------eEEEEecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEe----------
Confidence 43211 10 01112346778888753211 244455544433333211
Q ss_pred ccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 345 AEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
. .+++||++++..++++++.+.++|+++
T Consensus 423 ---------------~---g~~iRi~p~l~~t~e~i~~~l~~l~~~ 450 (476)
T 3i5t_A 423 ---------------L---GDLCVISPPLIISRAQIDEMVAIMRQA 450 (476)
T ss_dssp ---------------E---TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ---------------c---CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 0 278999988888877777777766654
No 220
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.85 E-value=5.4e-20 Score=186.97 Aligned_cols=213 Identities=13% Similarity=0.051 Sum_probs=151.8
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHHH-H-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLGA-V-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~a-l-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
+.....++++.+++++|.++.+++++|+++ + .++.+++++||+|+++.++|.+.+ ..+...|+++++++.+
T Consensus 203 ~~g~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~----~~~~~~G~~~v~v~~~~~~ 278 (755)
T 2vyc_A 203 HTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIE----QGLMLTGAKPVYMVPSRNR 278 (755)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHH----HHHHHHCCEEEEECCCBCT
T ss_pred CccHHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHH----HHHHHcCCEEEEEeCCCCc
Confidence 456778999999999999988999999865 7 777888999999999999998743 3355679999988752
Q ss_pred ------------CHHHHHhhcCC--CCc--------EEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc
Q psy12791 132 ------------KIENLIKYIKP--NTK--------MVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ 189 (393)
Q Consensus 132 ------------d~~~l~~~l~~--~~~--------~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~ 189 (393)
|++++++++.+ +++ ++++++| ||+|.+.|+++|.++|+++ ++++++|++|+.....
T Consensus 279 ~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~-~~~livDeA~~~~~~~ 356 (755)
T 2vyc_A 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKT-SDRLHFDEAWYGYARF 356 (755)
T ss_dssp TSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTT-CSEEEEECTTCTTGGG
T ss_pred cccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHc-CCEEEEECcCchhccc
Confidence 78889888853 344 8999998 6999999999999999999 9999999999853211
Q ss_pred -------CCCCCc--CcE------EEEcccccccCCCCceEEEEEecCh--HH-HHHHHHHHHhc-CCCCCHHHHH---H
Q psy12791 190 -------KSLPWG--VDI------VLYSLTKYMNGHSDVVMGATVTNDD--SL-QARLKFLQNSM-GVVPSPFDCW---L 247 (393)
Q Consensus 190 -------~~~~~~--~di------~~~S~sK~~~G~~G~r~G~~~~~~~--~~-~~~~~~~~~~~-~~~~~~~~~~---~ 247 (393)
.++ .+ +|+ ++.|+||+++|+.+ +|+++.+++ .+ ...+....... ...++..... .
T Consensus 357 ~~~~~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~~~--g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~a 433 (755)
T 2vyc_A 357 NPIYADHYAM-RGEPGDHNGPTVFATHSTHKLLNALSQ--ASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDV 433 (755)
T ss_dssp CGGGTTSSSS-CSCCCCCSSBEEEEEEETTTSSSCCTT--CEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHH
T ss_pred CcccCCcchh-cCCcCCccCCCeEEEECccccccCcCC--eeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 122 34 565 99999999876655 788877643 12 12333222222 2233332211 1
Q ss_pred HHhccCC--HHHHHHHHHHHHHHHHHHHhhCCC
Q psy12791 248 VTRGLKT--LPCRLKEHERGSIEVAKFLESHPC 278 (393)
Q Consensus 248 ~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~ 278 (393)
+.+.++. ...++++..++.+.+++.|+++++
T Consensus 434 A~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 434 AVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp HHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2222222 345677777778888888876544
No 221
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.84 E-value=1.7e-20 Score=181.32 Aligned_cols=281 Identities=14% Similarity=0.095 Sum_probs=164.5
Q ss_pred HHHHHHHhCCCc----E-EEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHH-H--H-HhcccCCc--EEEeeCCC-
Q psy12791 65 ERCIASLEEAKH----G-LCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRY-F--A-QVAPKIGL--EVDFVDLR- 131 (393)
Q Consensus 65 r~~la~~~~~~~----~-i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~-~--~-~~~~~~g~--~v~~~~~~- 131 (393)
++.+++++|.+. . ++++||+.++ .++.+++++||+|+++++.|++.+.. + . ..+...|. +++.++.+
T Consensus 106 ~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~ 185 (490)
T 2a7v_A 106 QRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP 185 (490)
T ss_dssp HHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT
T ss_pred HHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc
Confidence 389999999885 3 4456999997 78888999999999999998653210 0 0 01223443 33444322
Q ss_pred -----CHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccc-----cCCCCCcCcEEE
Q psy12791 132 -----KIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYY-----QKSLPWGVDIVL 200 (393)
Q Consensus 132 -----d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~-----~~~~~~~~di~~ 200 (393)
|++++++.+. .++++|+++.++||+ ..|+++|.++|+++ |+++++|+++..+.. ..++. ++|+++
T Consensus 186 ~~~~iD~d~le~~l~~~~~klIi~~~s~~~~--~~dl~~i~~ia~~~-g~~livD~Ah~~glv~~g~~~~~~~-~aDiv~ 261 (490)
T 2a7v_A 186 KTGLIDYNQLALTARLFRPRLIIAGTSAYAR--LIDYARMREVCDEV-KAHLLADMAHISGLVAAKVIPSPFK-HADIVT 261 (490)
T ss_dssp TTCSBCHHHHHHHHHHHCCSEEEECCSSCCS--CCCHHHHHHHHHHT-TCEEEEECGGGHHHHHTTSSCCGGG-TCSEEE
T ss_pred ccCCcCHHHHHHHHhhcCCcEEEEcCCCCCC--cccHHHHHHHHHHc-CCEEEEccccccccccCCcCCCCCC-CCCEEE
Confidence 8999999885 368999999888874 67999999999999 999999999875322 22332 689999
Q ss_pred EcccccccCCCCceEEEEEecCh--------------HHHHHHHHHHHhc-CCCCCHHH-HHHH--Hh-cc-CCHHHHHH
Q psy12791 201 YSLTKYMNGHSDVVMGATVTNDD--------------SLQARLKFLQNSM-GVVPSPFD-CWLV--TR-GL-KTLPCRLK 260 (393)
Q Consensus 201 ~S~sK~~~G~~G~r~G~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~~~-~~~~--~~-~~-~~~~~~~~ 260 (393)
.|+||+++|+ |+|+++++++ ++.++++...... .+.+.... +.++ .. .. +.+..+.+
T Consensus 262 ~S~hK~l~Gp---~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~ 338 (490)
T 2a7v_A 262 TTTHKTLRGA---RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSL 338 (490)
T ss_dssp EESSGGGCSC---SCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ECCcccCccc---cchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 9999998654 5799998853 3556665443321 11222221 1111 11 11 23455677
Q ss_pred HHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC---CHHHHHHHHHhcCccccccccCCc
Q psy12791 261 EHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG---GAEETRIFLESLLIFRCAESLGGI 337 (393)
Q Consensus 261 ~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~g~~ 337 (393)
+..++++.+.+.|.+. ++. +..++ .-..++++.+.+ +..+...+++. .++.++.+..
T Consensus 339 ~~~~na~~L~~~L~~~-G~~-v~~~~---------------t~t~lv~vdl~~~g~~~~~~~~~L~~---~GI~v~~~~~ 398 (490)
T 2a7v_A 339 QVLKNARAMADALLER-GYS-LVSGG---------------TDNHLVLVDLRPKGLDGARAERVLEL---VSITANKNTC 398 (490)
T ss_dssp HHHHHHHHHHHHHHHT-TCE-EGGGS---------------CSSSEEEEECTTTTCCHHHHHHHHHH---TTEECEEECC
T ss_pred HHHHHHHHHHHHHHHc-CcE-EecCC---------------CCCeEEEEEeCCCCCCHHHHHHHHHh---CCeEEecCcc
Confidence 7788999999999874 332 21111 013578888742 33444444443 3444443211
Q ss_pred cccccCcccccCCCCChhhHhhcCCCCCeEEEEecC----CChHHHHHHHHHHHHHh
Q psy12791 338 ESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGV----EGYTDLIADLDQALRKA 390 (393)
Q Consensus 338 ~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~----~~~~~~i~~l~~al~~~ 390 (393)
..- ..| ..++.|||+... ..++++++.+.+++.++
T Consensus 399 p~d-~~p-----------------~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~ 437 (490)
T 2a7v_A 399 PGD-RSA-----------------ITPGGLRLGAPALTSRQFREDDFRRVVDFIDEG 437 (490)
T ss_dssp TTC-CCS-----------------SSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCC-CCC-----------------CCCCceEecccccccCCCCHHHHHHHHHHHHHH
Confidence 100 001 125789997743 34566677777766544
No 222
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.84 E-value=1.4e-20 Score=176.78 Aligned_cols=279 Identities=11% Similarity=0.058 Sum_probs=177.7
Q ss_pred CchHHHHHHHHHHHhCCC--cEEEe-c-cHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-
Q psy12791 58 NPTRRNLERCIASLEEAK--HGLCY-S-SGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR- 131 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~--~~i~~-~-~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~- 131 (393)
....++.|+.+|+++|++ +.|++ + +|+.++ .++..++++||++++..-++.+. .+...++..| ++..++.+
T Consensus 71 ~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~--~~~~~a~~~G-~v~~v~~~~ 147 (386)
T 3qm2_A 71 IQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAA--SAIKEAKKYC-APQIIDAKI 147 (386)
T ss_dssp --CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHH--HHHHHHTTTS-EEEEEECEE
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHH--HHHHHHHHhC-CeEEEecCc
Confidence 356788999999999986 35555 4 556668 77788889999987655544433 3455677888 88877654
Q ss_pred -------CHHHHHhhcCCCCcEEEEecCCCCcccc-cCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCC-cCcEEEEc
Q psy12791 132 -------KIENLIKYIKPNTKMVWIENPTNPLMTV-FDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPW-GVDIVLYS 202 (393)
Q Consensus 132 -------d~~~l~~~l~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~-~~di~~~S 202 (393)
++++++..++++|++|.+++..|.||.+ .|+++|. + |+++++|.+++.+.. |++. ..++++.|
T Consensus 148 ~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~~i~-----~-g~~~~vDa~qs~g~~--pidv~~~~~~~~s 219 (386)
T 3qm2_A 148 TVDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPDFG-----P-EVVVTADFSSTILSA--PLDVSRYGVIYAG 219 (386)
T ss_dssp EETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCCCCCCC-----T-TCCEEEECTTTTTSS--CCCGGGCSEEEEE
T ss_pred ccCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCchhhhc-----C-CCEEEEEcccccCCC--CCCccccCEEEEe
Confidence 3567777888899999999999999996 8888875 7 999999999997654 4442 23578899
Q ss_pred ccccccCCCCceEEEEEecChHHHHHHH----------HHH---HhcCCCCCHHHHHHHHhccCC------HHHHHHHHH
Q psy12791 203 LTKYMNGHSDVVMGATVTNDDSLQARLK----------FLQ---NSMGVVPSPFDCWLVTRGLKT------LPCRLKEHE 263 (393)
Q Consensus 203 ~sK~~~G~~G~r~G~~~~~~~~~~~~~~----------~~~---~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 263 (393)
.+|++ ||+| +|+++.+ +++.+++. ... ...+ +++....+.+..+++. +....++..
T Consensus 220 ~hK~l-GP~G--~g~l~v~-~~~~~~~~~~~p~~~~~~~~~~~~~~~g-Tp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~ 294 (386)
T 3qm2_A 220 AQKNI-GPAG--LTLVIVR-EDLLGKAHESCPSILDYTVLNDNDSMFN-TPPTFAWYLSGLVFKWLKAQGGVAAMHKINQ 294 (386)
T ss_dssp TTTTT-CCTT--EEEEEEE-GGGCSCCCTTSCGGGCHHHHHHC--------CCSHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ccccc-CCCc--cEEEEEC-HHHHhhhcccCCcHHHHHHHhhcCCCCC-CCcHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 99999 7999 9999987 44422111 010 0112 1111111112222221 333444555
Q ss_pred HHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccC
Q psy12791 264 RGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADL 343 (393)
Q Consensus 264 ~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~ 343 (393)
+..+.+.+.|++.+ + +..+. . +. .....++.|.+++.... ..++..|...++.+..|..
T Consensus 295 ~l~~~l~~~l~~~~-~--~~~~~-~--~~--------~rs~~iv~f~~~~~~~~-~~~~~~L~~~gI~~~~g~~------ 353 (386)
T 3qm2_A 295 QKAELLYGVIDNSD-F--YRNDV-A--QA--------NRSRMNVPFQLADNTLD-KVFLEESFAAGLHALKGHR------ 353 (386)
T ss_dssp HHHHHHHHHHHTCS-S--EECCB-C--GG--------GBCSSEEEEEESSGGGH-HHHHHHHHHTTEECCBCCT------
T ss_pred HHHHHHHHHHHHCC-C--cccCC-C--HH--------HcCceEEEEECCCcccc-HHHHHHHHHCCCEEeCCCC------
Confidence 56667777776552 1 11110 0 00 11236899999531112 4555556554555433311
Q ss_pred cccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 344 PAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 344 ~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
..+.+|+|++.++|+++|+++.++|+++.+
T Consensus 354 -------------------~~~~iRiS~~~~~t~edId~l~~~l~~~~~ 383 (386)
T 3qm2_A 354 -------------------VVGGMRASIYNAMPIEGVKALTDFMIDFER 383 (386)
T ss_dssp -------------------TTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred -------------------CcCeEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 024599999999999999999999998754
No 223
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.84 E-value=4.6e-20 Score=178.87 Aligned_cols=317 Identities=13% Similarity=0.069 Sum_probs=194.1
Q ss_pred CCCCC-CCC--CCCCccC-CeeeeCCCCCCCC---CccccCCCCchHHHHHHHHHHHhCCC-c-EEEeccHHHHH-HHHH
Q psy12791 22 DQWRS-QCV--IPPIILS-TTFKQNTPGQPPQ---GFEYSRSNNPTRRNLERCIASLEEAK-H-GLCYSSGLGAV-TAVT 91 (393)
Q Consensus 22 ~~~~~-~~~--~~p~~~~-~~~~~~~~~~~~~---~~~y~~~~~~~~~~lr~~la~~~~~~-~-~i~~~~G~~al-~~~~ 91 (393)
.+++| +++ .++++.. +.+.+++.+++.. .+.+..++++...+|+++|+++++.. + .++.++|++++ .++.
T Consensus 55 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik 134 (472)
T 3hmu_A 55 EEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIR 134 (472)
T ss_dssp CEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHH
T ss_pred CEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHH
Confidence 45778 666 6788743 4555544333211 12233456788899999999998754 4 55556667777 5555
Q ss_pred HhcC--------CCCeEEEcCCCccchHHHHHHh---------cccCCcEEEeeCCC---------C--------HHHHH
Q psy12791 92 HLLS--------AGDHIISGDDVYGGTYRYFAQV---------APKIGLEVDFVDLR---------K--------IENLI 137 (393)
Q Consensus 92 ~~~~--------~gd~vl~~~~~y~~~~~~~~~~---------~~~~g~~v~~~~~~---------d--------~~~l~ 137 (393)
.+.. ++++|++.+++|++........ .. ....+..++.. | +++++
T Consensus 135 ~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~-~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~le 213 (472)
T 3hmu_A 135 MVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSG-LIPDVHHINQPNWWAEGGDMDPEEFGLARARELE 213 (472)
T ss_dssp HHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTC-CCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccC-CCCCcEEeCCCccccCCcccCHHHHHHHHHHHHH
Confidence 4432 4678999999998643211111 11 11123334321 1 67788
Q ss_pred hhcC----CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-cCC-----CCCcCcEEEEcc
Q psy12791 138 KYIK----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-QKS-----LPWGVDIVLYSL 203 (393)
Q Consensus 138 ~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~-----~~~~~di~~~S~ 203 (393)
+.+. +++++|+++.++|++|.+.+ +++|.++|+++ |++||+||+|..+.. ... .....|++ ++
T Consensus 214 ~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~-gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~--t~ 290 (472)
T 3hmu_A 214 EAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKY-DILLIADEVICGFGRTGNWFGTQTMGIRPHIM--TI 290 (472)
T ss_dssp HHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE--EE
T ss_pred HHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHc-CCEEEEEccccCCcccCccchhHHhCCCCcee--ee
Confidence 7775 45778888888889999887 99999999999 999999999986421 111 11235666 57
Q ss_pred cccccCCCCceEEEEEecChHHHHHHHHH--HHhcCCCCCHHHHHHHHhccCCHH--HHHHHHH-HHHHHHHHHHhhC--
Q psy12791 204 TKYMNGHSDVVMGATVTNDDSLQARLKFL--QNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHE-RGSIEVAKFLESH-- 276 (393)
Q Consensus 204 sK~~~G~~G~r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~l~~~l~~~-- 276 (393)
+|.++ ..|+|+||++++ +++++.+... ........++..+..+...++.+. ...++.. ++...+.+.|+.+
T Consensus 291 sK~l~-gg~~plG~v~~~-~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~ 368 (472)
T 3hmu_A 291 AKGLS-SGYAPIGGSIVC-DEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTD 368 (472)
T ss_dssp CGGGT-TTSSCCEEEEEE-HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGG
T ss_pred chhhh-cCCcceEEEEEC-HHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 89994 556899999997 8888877211 111122345666666655554332 2344555 5556666666543
Q ss_pred -CCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCC-----------HHHHHHHHHhcCccccccccCCccccccCc
Q psy12791 277 -PCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGG-----------AEETRIFLESLLIFRCAESLGGIESLADLP 344 (393)
Q Consensus 277 -~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~ 344 (393)
+.+..+ ++.|.++.|.+..+ ......+.+.+...++.+..+
T Consensus 369 ~~~v~~v------------------r~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~--------- 421 (472)
T 3hmu_A 369 HPLVGEA------------------KIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHV--------- 421 (472)
T ss_dssp STTEEEE------------------EEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEE---------
T ss_pred CCCeEEE------------------EecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEec---------
Confidence 222211 23467888888432 122444555444333332210
Q ss_pred ccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 345 AEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
.++|||++.+..++++++.+.++|+++
T Consensus 422 -------------------g~~iRi~p~~~~t~e~i~~~l~~l~~~ 448 (472)
T 3hmu_A 422 -------------------GDRMIISPPLVITPAEIDEMFVRIRKS 448 (472)
T ss_dssp -------------------TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred -------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 278999999888888888777777654
No 224
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.84 E-value=6.3e-20 Score=178.02 Aligned_cols=296 Identities=16% Similarity=0.059 Sum_probs=174.0
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCC-----C----CeEEEcCCCccchHHHHHHhcccCCcEEEe
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSA-----G----DHIISGDDVYGGTYRYFAQVAPKIGLEVDF 127 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~-----g----d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~ 127 (393)
.+...+||+++|++++.++.+++++|++++ .++..+.++ | |+|++. +.|..++ .......|..+..
T Consensus 73 ~~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~---~~~~~~~~~~~~~ 148 (467)
T 2oqx_A 73 SRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTT---QGHSQINGCTVRN 148 (467)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHH---HHHHHHTTCEEEE
T ss_pred CchhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEec-ccccccc---hhhhhccCcceee
Confidence 567889999999999987777778888777 777766777 8 997776 4554432 2222334444432
Q ss_pred e------C------C---CCHHHHHhhcC----CCCcEEEEecCCCCc-ccccC---HHHHHHHHHhCCCcEEEEeCccC
Q psy12791 128 V------D------L---RKIENLIKYIK----PNTKMVWIENPTNPL-MTVFD---VKAISAVVKQHPDILLVLDNTFL 184 (393)
Q Consensus 128 ~------~------~---~d~~~l~~~l~----~~~~~v~l~~p~npt-G~~~~---~~~l~~l~~~~~~~~livDea~~ 184 (393)
. + . .|+++++++++ +++++|++++|+||+ |.+++ +++|.++|++| |++||+|+++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~-gi~li~D~a~~ 227 (467)
T 2oqx_A 149 VYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKY-DIPVVMDSARF 227 (467)
T ss_dssp CBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHT-TCCEEEECTTH
T ss_pred ccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHc-CCEEEEEchhh
Confidence 1 1 1 17899999887 379999999999998 88776 77999999999 99999997665
Q ss_pred c-cc--------ccCCCC---------CcCcEEEEcccccccCCCCceEEEEEecCh---HHHHHHHHHHHhcC-----C
Q psy12791 185 T-AY--------YQKSLP---------WGVDIVLYSLTKYMNGHSDVVMGATVTNDD---SLQARLKFLQNSMG-----V 238 (393)
Q Consensus 185 ~-~~--------~~~~~~---------~~~di~~~S~sK~~~G~~G~r~G~~~~~~~---~~~~~~~~~~~~~~-----~ 238 (393)
. .. ...... ...|+++.|+||++ |++ .+|+++++++ +...+++......+ .
T Consensus 228 ~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~-g~~--~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (467)
T 2oqx_A 228 AENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDA-MVP--MGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYG 304 (467)
T ss_dssp HHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTT-CCS--SCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCC
T ss_pred hhhhhhcccccccccCccHHHHhhhhhccCCeEEEeccccc-CCC--CceEEEecChhHHHHHHHHHHhhhccCCccccc
Confidence 4 11 011111 13678899999999 565 1488888744 34444433321111 1
Q ss_pred CCCHHHHHHHHhccC-CH-HHHHHHHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEc----
Q psy12791 239 VPSPFDCWLVTRGLK-TL-PCRLKEHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVN---- 312 (393)
Q Consensus 239 ~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---- 312 (393)
.........+...++ .+ ...+++..++.+.+.+.|++. ++..+ |. .+.++++.+.
T Consensus 305 ~~~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~--~~----------------~~~~~~~~~~~~~~ 365 (467)
T 2oqx_A 305 GLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ--QA----------------GGHAAFVDAGKLLP 365 (467)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE--EE----------------CSSCEEEEHHHHST
T ss_pred chhhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee--cC----------------CceEEEEechhhcc
Confidence 111111111111111 11 123445566777888888765 43322 22 1345677662
Q ss_pred C-CHHH--HHHHHHhc-CccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCC-ChHHHHHHHHHHH
Q psy12791 313 G-GAEE--TRIFLESL-LIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVE-GYTDLIADLDQAL 387 (393)
Q Consensus 313 ~-~~~~--~~~~~~~l-~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~-~~~~~i~~l~~al 387 (393)
+ +.++ ...+.+.| ...++.+..++.+.....+. + .. ......++||++++.. .++++++.+.++|
T Consensus 366 ~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~---~-g~------~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l 435 (467)
T 2oqx_A 366 HIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPK---T-GK------QLPCPAELLRLTIPRATYTQTHMDFIIEAF 435 (467)
T ss_dssp TSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTT---T-CS------BCCCSCCEEEECCCTTTSCHHHHHHHHHHH
T ss_pred cCCcccccHHHHHHHHHHhcCceeccccccccccccc---c-cc------cccCccCeEEEEecCCCCCHHHHHHHHHHH
Confidence 1 1111 34455555 44466665544321110000 0 00 0001247999999988 8888888887777
Q ss_pred HHh
Q psy12791 388 RKA 390 (393)
Q Consensus 388 ~~~ 390 (393)
+++
T Consensus 436 ~~~ 438 (467)
T 2oqx_A 436 KHV 438 (467)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 225
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.83 E-value=4.1e-20 Score=178.38 Aligned_cols=313 Identities=13% Similarity=0.058 Sum_probs=188.3
Q ss_pred CCCC-CCCC--CCCcc-CCeee-e-CCCC---CCCCCccc-cCCCCchHHHHHHHHHHHhC-C-CcEE-EeccHHHHH-H
Q psy12791 23 QWRS-QCVI--PPIIL-STTFK-Q-NTPG---QPPQGFEY-SRSNNPTRRNLERCIASLEE-A-KHGL-CYSSGLGAV-T 88 (393)
Q Consensus 23 ~~~~-~~~~--~p~~~-~~~~~-~-~~~~---~~~~~~~y-~~~~~~~~~~lr~~la~~~~-~-~~~i-~~~~G~~al-~ 88 (393)
.++| +++. ++++. ++.+. + ++.+ ++.....| +.|+.+...++++.|+++++ . .+.+ ++++|++++ .
T Consensus 55 ~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~ 134 (449)
T 2cjg_A 55 RYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVEN 134 (449)
T ss_dssp EEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHH
T ss_pred EEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHH
Confidence 3556 3332 56654 45555 5 4444 32222122 24566778999999999986 2 3444 555566777 5
Q ss_pred HHHHh---cC-----------CCCeEEEcCCCccchHHHH----------HHhcccCCcEEEeeCCCC--HH--------
Q psy12791 89 AVTHL---LS-----------AGDHIISGDDVYGGTYRYF----------AQVAPKIGLEVDFVDLRK--IE-------- 134 (393)
Q Consensus 89 ~~~~~---~~-----------~gd~vl~~~~~y~~~~~~~----------~~~~~~~g~~v~~~~~~d--~~-------- 134 (393)
++..+ .. +||+|++.+|.|++..... .........++..+|.+| .+
T Consensus 135 aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 214 (449)
T 2cjg_A 135 ALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALE 214 (449)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHH
T ss_pred HHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhh
Confidence 55322 22 2899999999998632111 111111112667777665 33
Q ss_pred -----HHHhhcC---CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccc-cCCC-----CCcC
Q psy12791 135 -----NLIKYIK---PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYY-QKSL-----PWGV 196 (393)
Q Consensus 135 -----~l~~~l~---~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~-~~~~-----~~~~ 196 (393)
++++.+. +++++|+++.++||+|...+ +++|.++|+++ |+++|+||+|..+.. .... ....
T Consensus 215 ~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~~g~g~~g~~~~~~~~~~~~ 293 (449)
T 2cjg_A 215 AEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEF-DALLIFDEVQTGCGLTGTAWAYQQLDVAP 293 (449)
T ss_dssp HHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSSTHHHHTCCC
T ss_pred HHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHC-CcEEEEeccccCCCccCcceeecccCCCc
Confidence 3777773 56888888777899997666 99999999999 999999999995321 1111 1235
Q ss_pred cEEEEcccccccCCCCceEEEEEecChHHHHHHHH-----HHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHH
Q psy12791 197 DIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKF-----LQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEV 269 (393)
Q Consensus 197 di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 269 (393)
|++ |+||++ |+||++++ +++.+.+.. .........++..+..+...++.+. ...++..++...+
T Consensus 294 di~--t~sK~l------~iG~~~~~-~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l 364 (449)
T 2cjg_A 294 DIV--AFGKKT------QVCGVMAG-RRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYL 364 (449)
T ss_dssp SEE--EECGGG------SSEEEEEC-GGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred eEE--EecCcc------cEEEEEEC-HHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 665 688987 48999997 677664211 1111122335666555555544322 2344555666666
Q ss_pred HHHHhh----CCC-cceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCc
Q psy12791 270 AKFLES----HPC-VKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLP 344 (393)
Q Consensus 270 ~~~l~~----~~~-~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~ 344 (393)
.+.|++ ++. +..+ ++.|.++.+.+. +......+.+.+...++.+..+
T Consensus 365 ~~~L~~l~~~~~~~~~~~------------------~~~g~~~~~~~~-~~~~~~~~~~~l~~~Gv~v~~~--------- 416 (449)
T 2cjg_A 365 RARLDELAADFPAVVLDP------------------RGRGLMCAFSLP-TTADRDELIRQLWQRAVIVLPA--------- 416 (449)
T ss_dssp HHHHHHHHHHSTTTSEEE------------------EEETTEEEEECS-SHHHHHHHHHHHHHTTEECEEE---------
T ss_pred HHHHHHHHhhCCCceeeE------------------eeccEEEEEEEC-ChHHHHHHHHHHHHCCeEEecC---------
Confidence 666654 232 2211 123678888884 3334455666554434443321
Q ss_pred ccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 345 AEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+++||+++++..++++++.+.++|+++.
T Consensus 417 ------------------g~~~iRi~~~~~~t~e~i~~~l~~l~~~l 445 (449)
T 2cjg_A 417 ------------------GADTVRFRPPLTVSTAEIDAAIAAVRSAL 445 (449)
T ss_dssp ------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred ------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 14799999999999988888888887653
No 226
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.83 E-value=3e-19 Score=166.24 Aligned_cols=275 Identities=12% Similarity=0.065 Sum_probs=180.9
Q ss_pred chHHHHHHHHHHHhCCC--cEEEe-ccHHHH-H-HHHHHhcCCCCeEE-EcCCCccchHHHHHHhcccCCcEEEeeCCC-
Q psy12791 59 PTRRNLERCIASLEEAK--HGLCY-SSGLGA-V-TAVTHLLSAGDHII-SGDDVYGGTYRYFAQVAPKIGLEVDFVDLR- 131 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~--~~i~~-~~G~~a-l-~~~~~~~~~gd~vl-~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~- 131 (393)
...++.|+.+++++|++ +.|++ |+|.++ + .++..++ +||++. +..-.|. . .+...++..|+++..++.+
T Consensus 50 ~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~-~--~~~~~a~~~G~~v~~~~~~~ 125 (361)
T 3m5u_A 50 EVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWT-K--KAIKEAQILGVNVKTVASSE 125 (361)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHH-H--HHHHHHHHTTCCEEEEEECT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHH-H--HHHHHHHHcCCceEEEeccc
Confidence 45678999999999985 35665 776665 7 6777777 788653 3222332 2 3445567789888887653
Q ss_pred ------CHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcccccCCCCCcCcEEEEcccc
Q psy12791 132 ------KIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQKSLPWGVDIVLYSLTK 205 (393)
Q Consensus 132 ------d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~~~~~~~~di~~~S~sK 205 (393)
++++ + ++++|++|.++|..|.||.++|. +++ + |+++++|.+++.+.....+. ..|+++.|.+|
T Consensus 126 ~g~~~~~~~~--~-l~~~t~lv~~~~~e~~tG~~~~~-----i~~-~-~~~~~vD~~q~~g~~~id~~-~~d~~~~s~~K 194 (361)
T 3m5u_A 126 ESNFDHIPRV--E-FSDNADYAYICSNNTIYGTQYQN-----YPK-T-KTPLIVDASSDFFSRKVDFS-NIALFYGGVQK 194 (361)
T ss_dssp TTTSCSCCCC--C-CCTTSSEEEEESEETTTTEECSS-----CCC-C-SSCEEEECGGGTTSSCCCCT-TEEEEEEETTT
T ss_pred CcCCCcCChh--h-cCCCCCEEEEeCCCCCcceeCCc-----ccc-c-CCEEEEEcccccCCCCCCcc-cCCEEEEechh
Confidence 2344 3 78889999999999999999772 333 6 99999999999776533333 47899999999
Q ss_pred cccCCCCceEEEEEecChHHHHHHHH--------HH---H--hcCCCCCHHHHHHHHhcc----C--CHHHHHHHHHHHH
Q psy12791 206 YMNGHSDVVMGATVTNDDSLQARLKF--------LQ---N--SMGVVPSPFDCWLVTRGL----K--TLPCRLKEHERGS 266 (393)
Q Consensus 206 ~~~G~~G~r~G~~~~~~~~~~~~~~~--------~~---~--~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~ 266 (393)
++ ||+| +|+++.+ +++.+++.. .. . ....+++....+.+..++ + .++...++..+..
T Consensus 195 ~~-gp~G--~g~l~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~ 270 (361)
T 3m5u_A 195 NA-GISG--LSCIFIR-KDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKA 270 (361)
T ss_dssp TS-SCTT--CEEEEEE-HHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred cc-CCCc--cEEEEEc-HHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 99 7999 9999998 777766542 01 0 011223332222222222 2 3555666677778
Q ss_pred HHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC--CHHHHHHHHHhcCccccccccCCccccccCc
Q psy12791 267 IEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG--GAEETRIFLESLLIFRCAESLGGIESLADLP 344 (393)
Q Consensus 267 ~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~ 344 (393)
+++.+.|++++++.....+. . ....+++.|.+++ ..+ ..+...|...++.+..|..
T Consensus 271 ~~l~~~L~~~~g~~~~~~~~-----~--------~rs~~ivsf~~~~~~~~~--~~~~~~L~~~gI~~~~g~~------- 328 (361)
T 3m5u_A 271 TMLYECIDLSNGFYKGHADK-----K--------DRSLMNVSFNIAKNKDLE--PLFVKEAEEAGMIGLKGHR------- 328 (361)
T ss_dssp HHHHHHHHTSTTSEEESSCG-----G--------GBCSSEEEEEESSCTTHH--HHHHHHHHHTTEECCBCCT-------
T ss_pred HHHHHHHHHCCCeeeccCCH-----H--------HcCCeEEEEECCCchhhh--HHHHHHHHHCCCEEecCCC-------
Confidence 88888888777542221110 0 1124689999964 122 3455666554555443311
Q ss_pred ccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhhc
Q psy12791 345 AEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKACK 392 (393)
Q Consensus 345 ~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~~ 392 (393)
..+.+|+|++.++++++++.+.++|+++.+
T Consensus 329 ------------------~~g~iRiS~~~~~t~edId~l~~al~~~~~ 358 (361)
T 3m5u_A 329 ------------------ILGGIRASIYNALNLDQVKTLCEFMKEFQG 358 (361)
T ss_dssp ------------------TTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred ------------------ccCeEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 025699999999999999999999998753
No 227
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.72 E-value=4.7e-22 Score=191.08 Aligned_cols=247 Identities=12% Similarity=0.077 Sum_probs=158.6
Q ss_pred CCCCC-CCCCCC--Cc-cCCeeeeCCCCCCCCCccccCCCCchHHHHHHHHHHHh-CCCcEEEeccHHHHH-HHHHHh--
Q psy12791 22 DQWRS-QCVIPP--II-LSTTFKQNTPGQPPQGFEYSRSNNPTRRNLERCIASLE-EAKHGLCYSSGLGAV-TAVTHL-- 93 (393)
Q Consensus 22 ~~~~~-~~~~~p--~~-~~~~~~~~~~~~~~~~~~y~~~~~~~~~~lr~~la~~~-~~~~~i~~~~G~~al-~~~~~~-- 93 (393)
.+++| .++..| ++ ..+.+.+++.+++.... ...|+++...+|+++|++++ +.+..++++||++|+ .++...
T Consensus 100 ~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~-~~~~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik~ar~ 178 (465)
T 2yky_A 100 HAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGL-NLSTQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALATATA 178 (465)
Confidence 35677 555543 43 35677777766644422 22456788899999999998 555677778888887 555432
Q ss_pred cCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCCCCHHHHHhhcC---CCCcEEEEecCCCCcccccC----HHH
Q psy12791 94 LSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDLRKIENLIKYIK---PNTKMVWIENPTNPLMTVFD----VKA 164 (393)
Q Consensus 94 ~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~~d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~----~~~ 164 (393)
...+++|++.+++|++............|+ .+..++..|++++++.++ +++++|+++..++++|.+.+ +++
T Consensus 179 ~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~ 258 (465)
T 2yky_A 179 ITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDL 258 (465)
Confidence 245689999999997633211100112344 455666678999999887 57899998877777998887 999
Q ss_pred HHHHHHhCCCcEEEEeCccCcccccCCCC---CcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHH--H---Hhc
Q psy12791 165 ISAVVKQHPDILLVLDNTFLTAYYQKSLP---WGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFL--Q---NSM 236 (393)
Q Consensus 165 l~~l~~~~~~~~livDea~~~~~~~~~~~---~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~--~---~~~ 236 (393)
|.++|+++ |+++|+||+|. +....... .+...-+.||+|+++ . |+|+||++++ +++++.+... . ...
T Consensus 259 l~~l~~~~-g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~t~sK~lg-~-G~piG~v~~~-~~i~~~l~~~~~g~~~~~~ 333 (465)
T 2yky_A 259 LRAEASRC-GALLIFDEVMT-SRLSGGGAQEMLGISADLTTLGKYIG-G-GMSFGAFGGR-RDLMERFDPARDGAFAHAG 333 (465)
Confidence 99999999 99999999999 53211111 122222348999994 4 8999999997 7888877651 1 111
Q ss_pred CCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHh
Q psy12791 237 GVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLE 274 (393)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~ 274 (393)
....++..+..+...++.+. ...++..+..+.+.+.|+
T Consensus 334 T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~ 373 (465)
T 2yky_A 334 TFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLN 373 (465)
Confidence 22334555555545554432 123334444444444444
No 228
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.78 E-value=5e-18 Score=169.76 Aligned_cols=211 Identities=12% Similarity=0.062 Sum_probs=152.5
Q ss_pred CCchHHHHHHHHHHHhCCCcEEEeccHHH-HH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---
Q psy12791 57 NNPTRRNLERCIASLEEAKHGLCYSSGLG-AV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--- 131 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~~~i~~~~G~~-al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--- 131 (393)
+.....++++.+|+++|++.++++++|++ ++ .++.+++++||+|++++++|.+. ...+...|+++++++.+
T Consensus 193 ~~g~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~----~~~l~lsGa~pv~v~~~~~~ 268 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSL----THLMMMSDVTPIYFRPTRNA 268 (715)
T ss_dssp TBTHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHH----HHHHHHSCCEEEEECCCBCT
T ss_pred CcHHHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHH----HHHHHHcCCEEEEEeccccc
Confidence 45668899999999999999999999975 56 77888999999999999999874 34567789999988753
Q ss_pred ------------CHHHHHhhcCC--CCc---EEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-----
Q psy12791 132 ------------KIENLIKYIKP--NTK---MVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ----- 189 (393)
Q Consensus 132 ------------d~~~l~~~l~~--~~~---~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~----- 189 (393)
|++++++++.+ +++ ++++++| |++|.+.|+++|.++|+++ + +++||+|+.+...
T Consensus 269 ~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~-~--livDEAH~~~~~f~~~~~ 344 (715)
T 3n75_A 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK-S--IHFDSAWVPYTNFSPIYE 344 (715)
T ss_dssp TCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCS-E--EEEECTTCTTGGGSGGGT
T ss_pred cccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcC-c--EEEccccccccccCCccc
Confidence 68889998863 344 8999999 9999999999999999876 4 7999999875311
Q ss_pred --CCCCCc--CcEE---EEcccccccCCCCceEEEEEecChHHHHHHHHHHHhc-CCCCCHHHHHHHHhc---cC--CHH
Q psy12791 190 --KSLPWG--VDIV---LYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSM-GVVPSPFDCWLVTRG---LK--TLP 256 (393)
Q Consensus 190 --~~~~~~--~di~---~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~--~~~ 256 (393)
..+..+ +|++ +.|+||+++|+.+ .|++.+++....++++...... .+.++....+.+..+ ++ .-.
T Consensus 345 ~~~al~~g~~aD~vii~~~S~hKtL~gltq--gs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~ 422 (715)
T 3n75_A 345 GKCGMSGGRVEGKVIYETQSTHKLLAAFSQ--ASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGK 422 (715)
T ss_dssp TSSTTSSSCCTTCEEEEEECHHHHSSCCTT--CEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHH
T ss_pred cccccccCcCCCEEEEEEecccccccCCCC--eeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccH
Confidence 122222 5655 9999999976656 8888887442233444443333 333444332222222 22 123
Q ss_pred HHHHHHHHHHHHHHHHHhhCC
Q psy12791 257 CRLKEHERGSIEVAKFLESHP 277 (393)
Q Consensus 257 ~~~~~~~~~~~~l~~~l~~~~ 277 (393)
.++++..+++..+++.|++++
T Consensus 423 ~~~~~l~~~a~~~r~~L~~i~ 443 (715)
T 3n75_A 423 RLINGSIERAIKFRKEIKRLR 443 (715)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 466777778888888777654
No 229
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.69 E-value=1.3e-16 Score=154.70 Aligned_cols=273 Identities=12% Similarity=0.077 Sum_probs=160.8
Q ss_pred HHHHHHHHHH----Hh--CCCcEEEeccHHHHH-HHHHHhc-------C------------------CC---CeEEEcCC
Q psy12791 61 RRNLERCIAS----LE--EAKHGLCYSSGLGAV-TAVTHLL-------S------------------AG---DHIISGDD 105 (393)
Q Consensus 61 ~~~lr~~la~----~~--~~~~~i~~~~G~~al-~~~~~~~-------~------------------~g---d~vl~~~~ 105 (393)
..++++++++ +. +.+..+++++|++|+ .++.... + +| ++|++.++
T Consensus 108 ~~~l~~~la~~l~~~~~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~ 187 (472)
T 1ohv_A 108 PENFVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMG 187 (472)
T ss_dssp BTTHHHHHHHTGGGGCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETT
T ss_pred HHHHHHHHHHHHHHhCCCCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECC
Confidence 3456666555 44 333577778888887 5554331 1 45 89999999
Q ss_pred CccchHHHHHHhcc-----cCCcE-----EEeeCC-----------C------CHHHHHhhcCC------CCcEEEEecC
Q psy12791 106 VYGGTYRYFAQVAP-----KIGLE-----VDFVDL-----------R------KIENLIKYIKP------NTKMVWIENP 152 (393)
Q Consensus 106 ~y~~~~~~~~~~~~-----~~g~~-----v~~~~~-----------~------d~~~l~~~l~~------~~~~v~l~~p 152 (393)
.|++.......+.. ..|.. .+.+|. + |++++++.+.+ ++++|++++.
T Consensus 188 ~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v 267 (472)
T 1ohv_A 188 AFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPI 267 (472)
T ss_dssp CCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCC
Confidence 99874332222111 11211 112221 0 46788888865 7889999888
Q ss_pred CCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccccc-CCCC---Cc----CcEEEEccccc-ccCCCCceEEEEE
Q psy12791 153 TNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQ-KSLP---WG----VDIVLYSLTKY-MNGHSDVVMGATV 219 (393)
Q Consensus 153 ~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~-~~~~---~~----~di~~~S~sK~-~~G~~G~r~G~~~ 219 (393)
+|++|.+.+ +++|.++|+++ |+++|+||+|..+... .... .+ .|++ ||||+ ++ +||++
T Consensus 268 ~~~~G~~~~~~~~l~~l~~l~~~~-g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~--t~sK~~l~------GG~~~ 338 (472)
T 1ohv_A 268 QSEGGDNHASDDFFRKLRDISRKH-GCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVM--TFSKKMMT------GGFFH 338 (472)
T ss_dssp BCTTTCBCCCHHHHHHHHHHHHHT-TCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEE--EECGGGSS------EEEEE
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHh-CCEEEEeCcccCCCCCCCchhccccCCCCCCCEE--EEcccccc------CCccC
Confidence 899999887 99999999999 9999999999842211 1111 23 5654 78899 53 47776
Q ss_pred ecChHHHHHHHHHHHhcCCCCCHHHHHHHHhccCCHH--HHHHHHHHHHHHHHHHHhhC----CC-cceEeCCCCCCCcc
Q psy12791 220 TNDDSLQARLKFLQNSMGVVPSPFDCWLVTRGLKTLP--CRLKEHERGSIEVAKFLESH----PC-VKGVLHPGLPSHPN 292 (393)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~----~~-~~~v~~~~l~~~~~ 292 (393)
+ +++.. +...........++..+..+...++.+. ...++..+..+.+.+.|+++ |. +..+
T Consensus 339 -~-~~~~~-~~~~~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~---------- 405 (472)
T 1ohv_A 339 -K-EEFRP-NAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRV---------- 405 (472)
T ss_dssp -C-GGGSC-SSSSSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEE----------
T ss_pred -c-hhhcc-cccccccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEee----------
Confidence 4 55421 1111111111335666555544443322 13344445555555555432 21 1111
Q ss_pred hHHHhhhcCCCcceEEEEEcCCHHHHHHHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEec
Q psy12791 293 HELAKSQWSGTSGMLSFYVNGGAEETRIFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVG 372 (393)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~ 372 (393)
++.+.++.+.+. +......+.+.+...++.+..+ ..++||++++
T Consensus 406 --------~~~g~~~~~~~~-~~~~~~~~~~~l~~~Gv~~~~~---------------------------g~~~iRi~~~ 449 (472)
T 1ohv_A 406 --------RGRGTFCSFDTP-DESIRNKLISIARNKGVMLGGC---------------------------GDKSIRFRPT 449 (472)
T ss_dssp --------EEETTEEEEECS-SHHHHHHHHHHHHHTTEECEEE---------------------------TTTEEEECCC
T ss_pred --------cCCceEEEEEeC-ChhHHHHHHHHHHHCCeEEecC---------------------------CCCEEEEECC
Confidence 223568888874 4444556666664434333221 1479999999
Q ss_pred CCChHHHHHHHHHHHHHhh
Q psy12791 373 VEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 373 ~~~~~~~i~~l~~al~~~~ 391 (393)
+.+++++++.+.++|+++.
T Consensus 450 ~~~t~e~i~~~~~~l~~~l 468 (472)
T 1ohv_A 450 LVFRDHHAHLFLNIFSDIL 468 (472)
T ss_dssp TTCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHH
Confidence 9999999999999887654
No 230
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.58 E-value=3.5e-14 Score=134.24 Aligned_cols=207 Identities=12% Similarity=0.038 Sum_probs=135.5
Q ss_pred HHHHHHHHHHhCCCc--EEEeccHHH-HH-HHHHHhcCC----CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--
Q psy12791 62 RNLERCIASLEEAKH--GLCYSSGLG-AV-TAVTHLLSA----GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-- 131 (393)
Q Consensus 62 ~~lr~~la~~~~~~~--~i~~~~G~~-al-~~~~~~~~~----gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-- 131 (393)
+.+...+.+++|.++ ..++++|++ .+ .++++.+++ ++.|+++..+|.+ ..+++...|+..++++..
T Consensus 101 ~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkS----v~kAl~l~Gl~p~~v~~~~~ 176 (450)
T 3bc8_A 101 NSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKS----CFKSMVTAGFEPVVIENVLE 176 (450)
T ss_dssp HHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHH----HHHHHHHTTCEEEEECCEEE
T ss_pred HHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHH----HHHHHHHcCCeeEEEEeeec
Confidence 345555666778873 445555554 43 444444443 8999999999986 566778899999888762
Q ss_pred ------CHHHHHhhcCC---CCcEEEEecC-CCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc-C-----CCCC-
Q psy12791 132 ------KIENLIKYIKP---NTKMVWIENP-TNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ-K-----SLPW- 194 (393)
Q Consensus 132 ------d~~~l~~~l~~---~~~~v~l~~p-~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~-~-----~~~~- 194 (393)
|++.+++++.+ +..++++.+| ++.+|.+-|+++|.++|++| |++++||+||+..... . .+..
T Consensus 177 ~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~-gi~l~VD~A~G~~~~~~~~l~~~a~~~~ 255 (450)
T 3bc8_A 177 GDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANY-DIPHVVNNAYGLQSSKCMHLIQQGARVG 255 (450)
T ss_dssp TTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHH-TCCEEEECTTTTTCHHHHHHHHHHHHHS
T ss_pred CccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHC-CCeEEEECCCchhhhhhHhHHHHHhccc
Confidence 78999998854 2345555555 44467888999999999999 9999999999963221 1 1122
Q ss_pred cCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcC-CCCCH-HHHHHHHhc--cCCHHHHHHHHHHHHHHHH
Q psy12791 195 GVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMG-VVPSP-FDCWLVTRG--LKTLPCRLKEHERGSIEVA 270 (393)
Q Consensus 195 ~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~l~ 270 (393)
++|+++.|.||++..+-| .+++..++++..+.+... +.+ ...+| +..+..... .+.+.+.+++..+.++.+.
T Consensus 256 ~AD~~v~S~HK~l~a~~~--~~~l~~rd~~~~~~~~~~--~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~ 331 (450)
T 3bc8_A 256 RIDAFVQSLDKNFMVPVG--GAIIAGFNEPFIQDISKM--YPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLS 331 (450)
T ss_dssp CCCEEEEEHHHHHSCCSS--CEEEEESCHHHHHHHHHH--SCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCccCCCchhc--cEEEEecCHHHHHHHHHH--hhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999965545 777777767777666432 111 11222 333332222 2234444455566677777
Q ss_pred HHHhhCC
Q psy12791 271 KFLESHP 277 (393)
Q Consensus 271 ~~l~~~~ 277 (393)
+.+++++
T Consensus 332 ~~l~~~~ 338 (450)
T 3bc8_A 332 TQLKKLA 338 (450)
T ss_dssp HHHHHHH
T ss_pred HHHHhhH
Confidence 7776654
No 231
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.50 E-value=6.1e-14 Score=130.93 Aligned_cols=196 Identities=12% Similarity=0.031 Sum_probs=133.3
Q ss_pred hCCC--cEEEeccHHHH-H-HHHHHhcCC----CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--------CHHH
Q psy12791 72 EEAK--HGLCYSSGLGA-V-TAVTHLLSA----GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--------KIEN 135 (393)
Q Consensus 72 ~~~~--~~i~~~~G~~a-l-~~~~~~~~~----gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--------d~~~ 135 (393)
+|.+ ...++.+|++. + .++++.+++ +|+|+++..+|.+ ..+.+...|+++++++.. |+++
T Consensus 129 ~G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKS----v~kAliL~Gl~Pv~V~p~~d~~~~~id~e~ 204 (501)
T 3hl2_A 129 AGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKS----CFKSMITAGFEPVVIENVLEGDELRTDLKA 204 (501)
T ss_dssp TTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHH----HHHHHHHTTCEEEEECEEEETTEEEECHHH
T ss_pred cCCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHH----HHHHHHHcCCeEEEEeeeecccccCCCHHH
Confidence 4777 35777788775 4 556666553 4999999999986 455677889999998772 7889
Q ss_pred HHhhcCC---CCcEEEE-ecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCccccc------CCCCCc-CcEEEEccc
Q psy12791 136 LIKYIKP---NTKMVWI-ENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTAYYQ------KSLPWG-VDIVLYSLT 204 (393)
Q Consensus 136 l~~~l~~---~~~~v~l-~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~~~~------~~~~~~-~di~~~S~s 204 (393)
+++++++ +..++++ +.++|..+.+-|+++|.++|++| |++++||+||+..... ..+..| +|+++.|.|
T Consensus 205 le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~-gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~H 283 (501)
T 3hl2_A 205 VEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANY-DIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLD 283 (501)
T ss_dssp HHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHH-TCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHH
T ss_pred HHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHc-CCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEeccc
Confidence 9888864 2334444 44455455667899999999999 9999999999974321 112246 999999999
Q ss_pred ccccCCCCceEEEEEecChHHHHHHHHHHHhcCC-CCCHHH-HHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhhC
Q psy12791 205 KYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGV-VPSPFD-CWLVTR--GLKTLPCRLKEHERGSIEVAKFLESH 276 (393)
Q Consensus 205 K~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~ 276 (393)
|++.-+-| +|.+..+++++++.+...- .|. ..++.. .++.+. +.+.+...+++..++.+.+.+.|+++
T Consensus 284 K~llvpIG--G~ii~~~d~e~l~~~~~~y--PGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~l 355 (501)
T 3hl2_A 284 KNFMVPVG--GAIIAGFNDSFIQEISKMY--PGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKL 355 (501)
T ss_dssp HHHCCCSS--CEEEEESCHHHHHHHHHTS--CSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeecC--ceEEEeCCHHHHHHHHHhC--CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99853323 5566577777777763322 122 222322 333332 33456667777778888888888764
No 232
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.50 E-value=2.4e-12 Score=123.33 Aligned_cols=290 Identities=17% Similarity=0.093 Sum_probs=169.8
Q ss_pred CCchHHHHHHHHHHHhCCC---cEEEeccHHHHH-HHHH--HhcCCCCeEEEcCCCccchHHHHHHhccc----------
Q psy12791 57 NNPTRRNLERCIASLEEAK---HGLCYSSGLGAV-TAVT--HLLSAGDHIISGDDVYGGTYRYFAQVAPK---------- 120 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~---~~i~~~~G~~al-~~~~--~~~~~gd~vl~~~~~y~~~~~~~~~~~~~---------- 120 (393)
+.+...+|.+.|+++...+ ...+++||++|+ .++. ......++|+....+|++...........
T Consensus 105 ~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p 184 (456)
T 4atq_A 105 PYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGP 184 (456)
T ss_dssp CCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCS
T ss_pred CcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCC
Confidence 3456677888999887543 466778999997 5542 22344568888888887753222211110
Q ss_pred CCcEEEeeCCC-----------CH-------HHHHhhcC-CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEE
Q psy12791 121 IGLEVDFVDLR-----------KI-------ENLIKYIK-PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILL 177 (393)
Q Consensus 121 ~g~~v~~~~~~-----------d~-------~~l~~~l~-~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~l 177 (393)
....+..+|.. +. +.++..+. +++.+|+++..+...|.+.+ +++|.++|++| |+++
T Consensus 185 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~-gill 263 (456)
T 4atq_A 185 FAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEK-GIVF 263 (456)
T ss_dssp CCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHH-TCEE
T ss_pred ccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhc-CCce
Confidence 11234445432 12 22333333 35788999988888888876 99999999999 9999
Q ss_pred EEeCccCccc-c-----cCCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Q psy12791 178 VLDNTFLTAY-Y-----QKSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNSMGVVPSPFDCWLVTRG 251 (393)
Q Consensus 178 ivDea~~~~~-~-----~~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (393)
|+||++..+. . ........|+++ ++|.++ .|+.+|.++++ +++.+.+...........+|..+..+++.
T Consensus 264 I~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lg--gg~P~~av~~~-~~i~~~~~~~~~~~Tf~gnpla~aaala~ 338 (456)
T 4atq_A 264 IADEVQSGFCRTGEWFAVDHEGVVPDIIT--MAKGIA--GGLPLSAITGR-ADLLDAVHPGGLGGTYGGNPVACAAALAA 338 (456)
T ss_dssp EEECTTTTTTTTSSSSGGGGTTCCCSEEE--ECGGGG--TTSSCEEEEEE-HHHHTTSCTTSSCCSSSSCHHHHHHHHHH
T ss_pred EecccccccCCccccccccccCCCCchhh--hhhccc--CcCCceeeEec-HHHHhcccccCCCCCCCCChHHHHhhHHH
Confidence 9999998631 1 122233578886 569985 45679999998 77777654322222233467777777666
Q ss_pred cCCHHH--HHHHHHHHHHHHHHHHh----hCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC------CHHHHH
Q psy12791 252 LKTLPC--RLKEHERGSIEVAKFLE----SHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG------GAEETR 319 (393)
Q Consensus 252 ~~~~~~--~~~~~~~~~~~l~~~l~----~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 319 (393)
++.+++ ..++..+..+.+.+.|+ +++.. ..+ .+.+.+|.|.++.|.+.. +.+...
T Consensus 339 L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~---~~~----------~v~~VRG~Gl~~giel~~~~~~~~~~~~~~ 405 (456)
T 4atq_A 339 IDTMEQHDLNGRARHIEELALGKLRELAAELSAG---GGS----------VVGDIRGRGAMLAIELVQPGSKEPNAELTK 405 (456)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC------------------CEEEEEEETTEEEEEEBCTTSCCBCHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccc---cCC----------ceEEeeecceEEEEEEecCCCCCcCHHHHH
Confidence 654432 12222232333333333 22210 000 112235567788888741 344566
Q ss_pred HHHHhcCccccccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHh
Q psy12791 320 IFLESLLIFRCAESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKA 390 (393)
Q Consensus 320 ~~~~~l~~~~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 390 (393)
++.+.+...++-+... |...+.|||.+.+..++++++.+.++|++.
T Consensus 406 ~v~~~~~~~Gvl~~~~-------------------------g~~~~~irl~PpL~it~~~id~~l~~l~~a 451 (456)
T 4atq_A 406 AVAAACLKEGVIILTC-------------------------GTYGNVIRLLPPLVISDELLIDGLEVLAAA 451 (456)
T ss_dssp HHHHHHHHTTEECEEE-------------------------CTTSCEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEec-------------------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 6666655444333211 112578999988877777777666666544
No 233
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.48 E-value=3.6e-12 Score=118.53 Aligned_cols=239 Identities=14% Similarity=0.120 Sum_probs=149.6
Q ss_pred HHHHHHHhCCCc-----EEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHH-H-HH--hcccCC--cEEEeeCCC-
Q psy12791 65 ERCIASLEEAKH-----GLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRY-F-AQ--VAPKIG--LEVDFVDLR- 131 (393)
Q Consensus 65 r~~la~~~~~~~-----~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~-~-~~--~~~~~g--~~v~~~~~~- 131 (393)
.+...+++|++. .|-.-||++|. .+..++++|||+|+..+..+++...- + .. -....| .+.+.++++
T Consensus 106 ~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~ 185 (490)
T 3ou5_A 106 QRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP 185 (490)
T ss_dssp HHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEET
T ss_pred HHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCC
Confidence 344566889874 58889999996 88899999999999998877653110 0 00 001111 133333332
Q ss_pred -----CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCcc-----cccCCCCCcCcEEE
Q psy12791 132 -----KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLTA-----YYQKSLPWGVDIVL 200 (393)
Q Consensus 132 -----d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~~-----~~~~~~~~~~di~~ 200 (393)
|.+++++...+ ++++|++....+| ..+|.++++++|++. |++|++|.++..+ .+.+|+.+ +|+++
T Consensus 186 ~t~~IDyd~~~~~A~~~kPklIi~G~SaY~--r~id~~~~reIAd~v-GA~Lm~DmAHiaGLVA~g~~psP~~~-ADvVT 261 (490)
T 3ou5_A 186 KTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEV-KAHLLADMAHISGLVAAKVIPSPFKH-ADIVT 261 (490)
T ss_dssp TTTEECHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHH-TCEEEEECGGGHHHHHTTSSCCGGGT-CSEEE
T ss_pred CCCcccHHHHHHHHhhcCCCeEEECCccCc--cccCHHHHHHHHhhc-ccEEEechhhhhhhhcccccCCcccc-ceEEe
Confidence 77888776543 6899998766666 578999999999999 9999999999874 34567765 89999
Q ss_pred EcccccccCCCCceEEEEEecCh--------------HHHHHHHHHHHh--cCCCCCHHHHHHHH---h-ccCCHHHHHH
Q psy12791 201 YSLTKYMNGHSDVVMGATVTNDD--------------SLQARLKFLQNS--MGVVPSPFDCWLVT---R-GLKTLPCRLK 260 (393)
Q Consensus 201 ~S~sK~~~G~~G~r~G~~~~~~~--------------~~~~~~~~~~~~--~~~~~~~~~~~~~~---~-~~~~~~~~~~ 260 (393)
.|.||.+.|| |+|.+.++++ ++.+++.....+ .|+......+..+. . .........+
T Consensus 262 tTTHKTLrGP---rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~ 338 (490)
T 3ou5_A 262 TTTHKTLRGA---RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSL 338 (490)
T ss_dssp EESSSTTCSC---SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ccccccccCC---CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHH
Confidence 9999999766 7899998742 566777554332 22222122222211 1 1223556677
Q ss_pred HHHHHHHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcC---CHHHHHHHHHhcCc
Q psy12791 261 EHERGSIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNG---GAEETRIFLESLLI 327 (393)
Q Consensus 261 ~~~~~~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~ 327 (393)
+..+|++.|++.|.+... . +. .+.. -..++.+.+.+ +-.+++..++...+
T Consensus 339 qVv~NAkaLA~~L~~~G~-~-vv-sGgT--------------dnHlvLvDl~~~g~tG~~ae~~Le~agI 391 (490)
T 3ou5_A 339 QVLKNARAMADALLERGY-S-LV-SGGT--------------DNHLVLVDLRPKGLDGARAERVLELVSI 391 (490)
T ss_dssp HHHHHHHHHHHHHHHTTC-E-EG-GGSC--------------SSSEEEEECGGGTCCHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHhCCC-e-ee-cCCC--------------CceEEEEeccccCCCHHHHHHHHHHcCc
Confidence 788999999999976532 1 21 1111 13567777642 45677878777664
No 234
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.45 E-value=6.9e-13 Score=126.56 Aligned_cols=209 Identities=17% Similarity=0.134 Sum_probs=133.9
Q ss_pred CchHHHHHHHHHHHhCC-CcEEEeccHHHHH-HHHHHh--cCCCCeEEEcCCCccchHHHHHHh--cccCCcEEEeeCCC
Q psy12791 58 NPTRRNLERCIASLEEA-KHGLCYSSGLGAV-TAVTHL--LSAGDHIISGDDVYGGTYRYFAQV--APKIGLEVDFVDLR 131 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~-~~~i~~~~G~~al-~~~~~~--~~~gd~vl~~~~~y~~~~~~~~~~--~~~~g~~v~~~~~~ 131 (393)
++...+|.+.|++.+.. +...+++||++|. .++... ....++|+....+|++........ ..........+|.+
T Consensus 126 ~~~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~n 205 (454)
T 4ao9_A 126 NLLEGRLARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYN 205 (454)
T ss_dssp ESSHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTT
T ss_pred cHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCCc
Confidence 45567888889888754 4567778999986 554322 234567888888887632110000 01112356677888
Q ss_pred CHHHHHhhcC---CCCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccCcccccC-----CCCCcCcEE
Q psy12791 132 KIENLIKYIK---PNTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAYYQK-----SLPWGVDIV 199 (393)
Q Consensus 132 d~~~l~~~l~---~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~~~~-----~~~~~~di~ 199 (393)
|++.+++.+. +++.+|+++..++..|.+.| +++|.++|++| |+++|+||++.. -... ......|++
T Consensus 206 d~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~-g~lLI~DEV~tG-R~G~~~a~e~~gv~PDi~ 283 (454)
T 4ao9_A 206 DAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQV-GALLVFDEVMTS-RLAPHGLANKLGIRSDLT 283 (454)
T ss_dssp CHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHH-TCEEEEECTTGG-GGSTTCHHHHHTCCCSEE
T ss_pred hHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhc-CCEEEEECCCcC-CCccccchhccCCCCcEE
Confidence 9988888775 35788999988888899887 99999999999 999999999974 2111 112346887
Q ss_pred EEcccccccCCCCceEEEEEecChHHHHHHHHHHH--hcC--CCCCHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHH
Q psy12791 200 LYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQN--SMG--VVPSPFDCWLVTRGL---KTLPCRLKEHERGSIEVAKF 272 (393)
Q Consensus 200 ~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~ 272 (393)
+ ++|.++ .|+.+|+++++ +++++.+..... ..+ ...+|..+..+...+ +. +...++..+..+++.+.
T Consensus 284 t--~gK~lg--gG~Piga~~~~-~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~-~~~~~~~~~~g~~l~~~ 357 (454)
T 4ao9_A 284 T--LGKYIG--GGMSFGAFGGR-ADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFT-PEAAGALAERGEALRAR 357 (454)
T ss_dssp E--EEGGGG--TTSSCEEEEEC-HHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHH
T ss_pred E--eccccC--CCCcceeeeeH-HHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhc-cChhHHHHHHHHHHHHH
Confidence 4 779995 35679999987 788776532111 111 123566655544443 33 23445555555556555
Q ss_pred Hh
Q psy12791 273 LE 274 (393)
Q Consensus 273 l~ 274 (393)
|+
T Consensus 358 L~ 359 (454)
T 4ao9_A 358 LN 359 (454)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 235
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.37 E-value=3.1e-12 Score=131.11 Aligned_cols=206 Identities=14% Similarity=0.131 Sum_probs=124.9
Q ss_pred HHHHhhcC--------CCCcEEEEecC-CCCcccccC----HHHHHHHHHhCCCcEEEEeCccCccc-ccCCC-----CC
Q psy12791 134 ENLIKYIK--------PNTKMVWIENP-TNPLMTVFD----VKAISAVVKQHPDILLVLDNTFLTAY-YQKSL-----PW 194 (393)
Q Consensus 134 ~~l~~~l~--------~~~~~v~l~~p-~nptG~~~~----~~~l~~l~~~~~~~~livDea~~~~~-~~~~~-----~~ 194 (393)
+.+++.+. +++.+|+++.. ++..|.+.+ +++|.++|++| |+++|+||++..+. ..... ..
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~-gilLI~DEV~tGfGRtG~~fa~e~~gv 655 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNR-KIPVIFDEVFTGFWRLGVETTTELLGC 655 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHT-TCCEEEECTTTTTTTTSBSSTHHHHSS
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHc-CCeEEEEcCccccccCCCchhhHhcCC
Confidence 45666664 24678888886 888888886 89999999999 99999999998531 11111 12
Q ss_pred cCcEEEEcccccccCCCC-ceEEEEEecChHHHHHHHHHH------HhcCCCCCHHHHHHHHhccCCHHH--HHHHHHHH
Q psy12791 195 GVDIVLYSLTKYMNGHSD-VVMGATVTNDDSLQARLKFLQ------NSMGVVPSPFDCWLVTRGLKTLPC--RLKEHERG 265 (393)
Q Consensus 195 ~~di~~~S~sK~~~G~~G-~r~G~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 265 (393)
..|++ +++|.++| | +++|+++++ +++.+.+.... .......+|..++.+...++.+++ ..++..++
T Consensus 656 ~PDii--tlsK~L~g--G~~Plgav~~~-~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~ 730 (831)
T 4a0g_A 656 KPDIA--CFAKLLTG--GMVPLAVTLAT-DAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQ 730 (831)
T ss_dssp CCSEE--EECGGGGT--TSSCCEEEEEC-HHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTT
T ss_pred CCcEE--EEeccccc--CccCcEEEEEC-HHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 45776 58899953 6 789999998 88887664211 111223457776665554432211 00010000
Q ss_pred --------HHHHHHHHhhCCCcceEeCCCCCCCcchHHHhhhcCCCcceEEEEEcCCH-------HHHHHHHHhcCcccc
Q psy12791 266 --------SIEVAKFLESHPCVKGVLHPGLPSHPNHELAKSQWSGTSGMLSFYVNGGA-------EETRIFLESLLIFRC 330 (393)
Q Consensus 266 --------~~~l~~~l~~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~~~ 330 (393)
.+.+.+.+..++.+..+ ++.|.++.+.+..+. +....+.+.+...++
T Consensus 731 ~~~l~~~l~~~l~~~l~~~~~v~~v------------------rg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv 792 (831)
T 4a0g_A 731 GKTLRELWDEELVQQISSHSAVQRV------------------VVIGTLFALELKADASNSGYASLYAKSLLIMLREDGI 792 (831)
T ss_dssp SSBBCCCSCHHHHHHHHHSTTEEEE------------------EEETTEEEEEEC---------CHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHHHHHHHhhCCCceeE------------------eecccEEEEEEecCccccccchHHHHHHHHHHHHCCc
Confidence 01233344445544333 334677888884221 234455555544343
Q ss_pred ccccCCccccccCcccccCCCCChhhHhhcCCCCCeEEEEecCCChHHHHHHHHHHHHHhh
Q psy12791 331 AESLGGIESLADLPAEMTHKSIPKETRDALGITDNLVRLSVGVEGYTDLIADLDQALRKAC 391 (393)
Q Consensus 331 ~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 391 (393)
.+.+ ..+.|||++.+..++++++.+.++|.++.
T Consensus 793 ~v~p----------------------------~g~~lrl~pp~~~t~e~id~~~~~l~~~l 825 (831)
T 4a0g_A 793 FTRP----------------------------LGNVIYLMCGPCTSPEICRRLLTKLYKRL 825 (831)
T ss_dssp ECCC----------------------------BTTEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEe----------------------------cCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 3321 03689999998989999988888887653
No 236
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.33 E-value=1.5e-10 Score=111.32 Aligned_cols=213 Identities=15% Similarity=0.142 Sum_probs=128.1
Q ss_pred CchHHHHHHHHHHHhCCC--cEEEeccHHHHH-HHHHHhc-------CC-CCeEEEcCCCccchHHHHHHhc-----ccC
Q psy12791 58 NPTRRNLERCIASLEEAK--HGLCYSSGLGAV-TAVTHLL-------SA-GDHIISGDDVYGGTYRYFAQVA-----PKI 121 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~--~~i~~~~G~~al-~~~~~~~-------~~-gd~vl~~~~~y~~~~~~~~~~~-----~~~ 121 (393)
++...+|.++|++....+ ...+.+||++|+ .++.... ++ ..+|+.-...|++......... +..
T Consensus 110 ~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~ 189 (473)
T 4e3q_A 110 SDQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVF 189 (473)
T ss_dssp EHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGG
T ss_pred CHHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCcccccccccccccccc
Confidence 455667888999887644 567778899987 5543211 23 3467888888876432211111 011
Q ss_pred C---cEEEeeCCC------------------CHHHHHhhcC----CCCcEEEEecCCCCcccccC----HHHHHHHHHhC
Q psy12791 122 G---LEVDFVDLR------------------KIENLIKYIK----PNTKMVWIENPTNPLMTVFD----VKAISAVVKQH 172 (393)
Q Consensus 122 g---~~v~~~~~~------------------d~~~l~~~l~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~ 172 (393)
+ .....++.. ..+++++.+. +++.+|+++..+...|.+.| +++|.++|+++
T Consensus 190 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~ 269 (473)
T 4e3q_A 190 GLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKY 269 (473)
T ss_dssp TCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHT
T ss_pred CCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhccc
Confidence 1 112233221 0233333332 34678888988888888876 99999999999
Q ss_pred CCcEEEEeCccCccc-cc-----CCCCCcCcEEEEcccccccCCCCceEEEEEecChHHHHHHHHHHHh-------cCCC
Q psy12791 173 PDILLVLDNTFLTAY-YQ-----KSLPWGVDIVLYSLTKYMNGHSDVVMGATVTNDDSLQARLKFLQNS-------MGVV 239 (393)
Q Consensus 173 ~~~~livDea~~~~~-~~-----~~~~~~~di~~~S~sK~~~G~~G~r~G~~~~~~~~~~~~~~~~~~~-------~~~~ 239 (393)
|+++|+||++..+- .. .......|+++ ++|.++ -.++.+|.++++ +++.+.+...... ....
T Consensus 270 -gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t--~~K~l~-gG~~Pl~av~~~-~~i~~~~~~~~~~~~~~~hg~T~~ 344 (473)
T 4e3q_A 270 -DIPVISDEVICGFGRTGNTWGCVTYDFTPDAII--SSKNLT-AGFFPMGAVILG-PELSKRLETAIEAIEEFPHGFTAS 344 (473)
T ss_dssp -TCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEE--ECGGGG-TTSSCCEEEEEC-HHHHHHHHHHHHHHSCCCCCCTTT
T ss_pred -ceEEeccCccccCCcccchhHHHhcCCCCChHH--hccccc-CCCCCccccccc-HHHHHHhccccccccccccCCCCC
Confidence 99999999998741 11 11223578885 679994 233679999998 8888877543221 1223
Q ss_pred CCHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHhh
Q psy12791 240 PSPFDCWLVTRGLKTLPC--RLKEHERGSIEVAKFLES 275 (393)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~ 275 (393)
..|..+..+++.++.+.+ ..++..+...++.+.|++
T Consensus 345 Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~ 382 (473)
T 4e3q_A 345 GHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKH 382 (473)
T ss_dssp TCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHH
T ss_pred CCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHH
Confidence 467777777666654432 233334444455555543
No 237
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=71.22 E-value=25 Score=25.09 Aligned_cols=89 Identities=15% Similarity=0.078 Sum_probs=53.2
Q ss_pred EEEeccHHHHHHHHHHhcCCC-CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 77 GLCYSSGLGAVTAVTHLLSAG-DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 77 ~i~~~~G~~al~~~~~~~~~g-d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
.++++.|..+..++..+.+.| .+|++.+..-. .... +...+++....+..+.+.+.+.+. +..+|+.+.|..
T Consensus 8 v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~----~~~~-~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~~~~~- 80 (118)
T 3ic5_A 8 ICVVGAGKIGQMIAALLKTSSNYSVTVADHDLA----ALAV-LNRMGVATKQVDAKDEAGLAKALG-GFDAVISAAPFF- 80 (118)
T ss_dssp EEEECCSHHHHHHHHHHHHCSSEEEEEEESCHH----HHHH-HHTTTCEEEECCTTCHHHHHHHTT-TCSEEEECSCGG-
T ss_pred EEEECCCHHHHHHHHHHHhCCCceEEEEeCCHH----HHHH-HHhCCCcEEEecCCCHHHHHHHHc-CCCEEEECCCch-
Confidence 445555544434444455566 56666544322 1222 235678888888888888888775 577888766532
Q ss_pred cccccCHHHHHHHHHhCCCcEEE
Q psy12791 156 LMTVFDVKAISAVVKQHPDILLV 178 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~~~~~li 178 (393)
....+.+.+.+. ++..+
T Consensus 81 -----~~~~~~~~~~~~-g~~~~ 97 (118)
T 3ic5_A 81 -----LTPIIAKAAKAA-GAHYF 97 (118)
T ss_dssp -----GHHHHHHHHHHT-TCEEE
T ss_pred -----hhHHHHHHHHHh-CCCEE
Confidence 136677778887 76543
No 238
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=69.22 E-value=47 Score=27.40 Aligned_cols=120 Identities=15% Similarity=0.176 Sum_probs=66.9
Q ss_pred CchHHHHHHHHHHHhCCC---cEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE---EEeeCC
Q psy12791 58 NPTRRNLERCIASLEEAK---HGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE---VDFVDL 130 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~---~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~---v~~~~~ 130 (393)
.+...++-..+++..+.. ..+=+++|+-.. ..+...+.++.+|+..+..-. .....+..++..|.. +..+.
T Consensus 38 ~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~g~~~~~i~~~~- 115 (221)
T 3dr5_A 38 DEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESE-HQRQAKALFREAGYSPSRVRFLL- 115 (221)
T ss_dssp CHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHH-HHHHHHHHHHHTTCCGGGEEEEC-
T ss_pred CHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCcCcEEEEE-
Confidence 466666777777777765 566677776654 444444555667777766532 222233444455543 44443
Q ss_pred CCHHHHHhhc-CCCCcEEEEecCCCCcccccCHHHHHHHHHhC--CCcEEEEeCccCc
Q psy12791 131 RKIENLIKYI-KPNTKMVWIENPTNPLMTVFDVKAISAVVKQH--PDILLVLDNTFLT 185 (393)
Q Consensus 131 ~d~~~l~~~l-~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~--~~~~livDea~~~ 185 (393)
.|..++...+ ...-.+|++..+. ....++.+.+.+. ||.++++|++...
T Consensus 116 gda~~~l~~~~~~~fD~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~dn~~~~ 167 (221)
T 3dr5_A 116 SRPLDVMSRLANDSYQLVFGQVSP------MDLKALVDAAWPLLRRGGALVLADALLD 167 (221)
T ss_dssp SCHHHHGGGSCTTCEEEEEECCCT------TTHHHHHHHHHHHEEEEEEEEETTTTGG
T ss_pred cCHHHHHHHhcCCCcCeEEEcCcH------HHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 3555554444 3456788875331 1233333333332 5788999987754
No 239
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=56.47 E-value=14 Score=31.16 Aligned_cols=94 Identities=5% Similarity=-0.049 Sum_probs=51.9
Q ss_pred HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCH
Q psy12791 84 LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDV 162 (393)
Q Consensus 84 ~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 162 (393)
++++ ..+......|.+|++..|.-...+. ..+....|.++..++..+.+++.+.+ .+..+|++.=.+.-++ +
T Consensus 33 TT~lL~~~~r~~~~g~kvli~kp~~D~Ryg--~~i~sr~G~~~~a~~i~~~~di~~~~-~~~dvViIDEaQF~~~----v 105 (234)
T 2orv_A 33 STELMRRVRRFQIAQYKCLVIKYAKDTRYS--SSFCTHDRNTMEALPACLLRDVAQEA-LGVAVIGIDEGQFFPD----I 105 (234)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEEETTCCCC-------------CEEEEESSGGGGHHHH-TTCSEEEESSGGGCTT----H
T ss_pred HHHHHHHHHHHHHCCCeEEEEeecCCccch--HHHHhhcCCeeEEEecCCHHHHHHHh-ccCCEEEEEchhhhhh----H
Confidence 4454 5555555667778776665433221 23444556665554444434444444 3578999977766553 7
Q ss_pred HHHHHHHHhCCCcEEEEeCccCc
Q psy12791 163 KAISAVVKQHPDILLVLDNTFLT 185 (393)
Q Consensus 163 ~~l~~l~~~~~~~~livDea~~~ 185 (393)
.++.+++... ++.||+=.-..+
T Consensus 106 ~el~~~l~~~-gi~VI~~GL~~D 127 (234)
T 2orv_A 106 VEFCEAMANA-GKTVIVAALDGT 127 (234)
T ss_dssp HHHHHHHHHT-TCEEEEECCSBC
T ss_pred HHHHHHHHhC-CCEEEEEecccc
Confidence 8888888888 999998766554
No 240
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=55.11 E-value=33 Score=28.37 Aligned_cols=79 Identities=15% Similarity=0.173 Sum_probs=43.0
Q ss_pred EEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe--eCCCCHHHHHhhcCC------CCcE
Q psy12791 77 GLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF--VDLRKIENLIKYIKP------NTKM 146 (393)
Q Consensus 77 ~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~--~~~~d~~~l~~~l~~------~~~~ 146 (393)
.+++|.|+..| .. ...+++.|-.|++....-...........+..|.++.. .++.|.+++.+.++. +..+
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDV 83 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence 56777777777 44 45677788888776443321111111221233445544 455588888877753 4566
Q ss_pred EEEecCCCC
Q psy12791 147 VWIENPTNP 155 (393)
Q Consensus 147 v~l~~p~np 155 (393)
++.+....+
T Consensus 84 li~~Ag~~~ 92 (235)
T 3l77_A 84 VVANAGLGY 92 (235)
T ss_dssp EEECCCCCC
T ss_pred EEECCcccc
Confidence 665443333
No 241
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=53.67 E-value=17 Score=29.88 Aligned_cols=37 Identities=14% Similarity=0.010 Sum_probs=31.1
Q ss_pred CCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEE
Q psy12791 142 PNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVL 179 (393)
Q Consensus 142 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~liv 179 (393)
-.+..|+++-..|+.|.....+++.+++++| |..++.
T Consensus 158 l~Pa~vicEi~~~~dG~mar~~~l~~fA~~h-~l~iit 194 (204)
T 1tks_A 158 LQPAGVICELVRDEDGLMMRLDDCIQFGKKH-GIKIIN 194 (204)
T ss_dssp SCSBEEEEEBBCTTTCCBCBHHHHHHHHHHH-TCCEEE
T ss_pred CCceEEEEEEeECCCCCcCCHHHHHHHHHHc-CCcEEE
Confidence 3578888877778999999999999999999 876653
No 242
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=52.04 E-value=39 Score=28.87 Aligned_cols=76 Identities=12% Similarity=0.059 Sum_probs=40.9
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcCC------CCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIKP------NTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~~------~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++..-.-..........++..|.++..+ ++.|.+++++.+.. +..
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 111 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLD 111 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 467788888888 44 456778888887652211111112222233445555554 44477666665531 455
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 112 ~lvnnA 117 (271)
T 3v2g_A 112 ILVNSA 117 (271)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 243
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=50.72 E-value=91 Score=27.38 Aligned_cols=76 Identities=14% Similarity=0.117 Sum_probs=44.5
Q ss_pred CcEEEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhccc------CCcEEEeeCCCCHHHHHhhcCCCCcE
Q psy12791 75 KHGLCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPK------IGLEVDFVDLRKIENLIKYIKPNTKM 146 (393)
Q Consensus 75 ~~~i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~------~g~~v~~~~~~d~~~l~~~l~~~~~~ 146 (393)
...|++|+|+.-+ .++..+++.|..|++..-.-............. .+++++..++.|.+.+.+.+. +..+
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~ 103 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-GVDH 103 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-TCSE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-CCCE
Confidence 3567776666556 444566777877765432211111112221111 577888888889999998886 5677
Q ss_pred EEEec
Q psy12791 147 VWIEN 151 (393)
Q Consensus 147 v~l~~ 151 (393)
|+-+.
T Consensus 104 Vih~A 108 (351)
T 3ruf_A 104 VLHQA 108 (351)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66544
No 244
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=50.44 E-value=58 Score=28.11 Aligned_cols=95 Identities=12% Similarity=0.096 Sum_probs=53.5
Q ss_pred EEEeccHHHHH--HHHHHhcCCCCeEEEcC-CCcc---chHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEe
Q psy12791 77 GLCYSSGLGAV--TAVTHLLSAGDHIISGD-DVYG---GTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIE 150 (393)
Q Consensus 77 ~i~~~~G~~al--~~~~~~~~~gd~vl~~~-~~y~---~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~ 150 (393)
.|++++|+.-+ .++..+++.|..|.+.. ..-. ....... .+...|++++..++.|.+.+.+++. +...|+.+
T Consensus 6 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~~~-~~d~vi~~ 83 (313)
T 1qyd_A 6 RVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLL-YFKQLGAKLIEASLDDHQRLVDALK-QVDVVISA 83 (313)
T ss_dssp CEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHH-HHHTTTCEEECCCSSCHHHHHHHHT-TCSEEEEC
T ss_pred EEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHH-HHHhCCeEEEeCCCCCHHHHHHHHh-CCCEEEEC
Confidence 35555554444 44455666676665433 2211 1000111 1234578888888889999998886 46666654
Q ss_pred cCCC-CcccccCHHHHHHHHHhCCC
Q psy12791 151 NPTN-PLMTVFDVKAISAVVKQHPD 174 (393)
Q Consensus 151 ~p~n-ptG~~~~~~~l~~l~~~~~~ 174 (393)
.... +...+.....+.+.|++. +
T Consensus 84 a~~~~~~~~~~~~~~l~~aa~~~-g 107 (313)
T 1qyd_A 84 LAGGVLSHHILEQLKLVEAIKEA-G 107 (313)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHS-C
T ss_pred CccccchhhHHHHHHHHHHHHhc-C
Confidence 4322 211334467788888887 6
No 245
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=49.79 E-value=42 Score=28.06 Aligned_cols=76 Identities=7% Similarity=0.043 Sum_probs=40.6
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|.+|++....-..........++..|.++..+ ++.|.+++.+.++ .+..
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 84 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLD 84 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 457788888888 44 456778888887643221111112222233345555444 4447666666553 1455
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 85 ~lv~nA 90 (246)
T 3osu_A 85 VLVNNA 90 (246)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 246
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=49.38 E-value=39 Score=28.86 Aligned_cols=76 Identities=12% Similarity=0.059 Sum_probs=41.1
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcCC------CCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIKP------NTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~~------~~~ 145 (393)
..+++|.|+..| .. ...+++.|-.|++..-.-...........+..|.++..+ ++.|.+++++.++. +..
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id 108 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLD 108 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 567888888888 44 456778888887643321111112222333445455444 44476666655531 455
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 109 ~lv~nA 114 (269)
T 4dmm_A 109 VLVNNA 114 (269)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 247
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=48.97 E-value=77 Score=24.89 Aligned_cols=94 Identities=13% Similarity=-0.005 Sum_probs=52.6
Q ss_pred cEEEeccHHHHHHHHHHhcCC-CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhh-cCCCCcEEEEecCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSA-GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKY-IKPNTKMVWIENPT 153 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~-gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~-l~~~~~~v~l~~p~ 153 (393)
..++++.|..+..+...+.+. |-.|++.+..-. .... ++..|..+..-+..+.+.+.++ --.+.++|+++.++
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~----~~~~-~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIREE----AAQQ-HRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH----HHHH-HHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH----HHHH-HHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 577788887765434444444 555665544322 1222 3456888777676677777665 12357888887665
Q ss_pred CCcccccCHHHHHHHHHhC-CCcEEEE
Q psy12791 154 NPLMTVFDVKAISAVVKQH-PDILLVL 179 (393)
Q Consensus 154 nptG~~~~~~~l~~l~~~~-~~~~liv 179 (393)
.. ....+...+++. ++..+++
T Consensus 116 ~~-----~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 116 HQ-----GNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp HH-----HHHHHHHHHHHTTCCSEEEE
T ss_pred hH-----HHHHHHHHHHHHCCCCEEEE
Confidence 21 123445566665 2344443
No 248
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=48.93 E-value=60 Score=23.86 Aligned_cols=87 Identities=17% Similarity=0.008 Sum_probs=48.1
Q ss_pred EEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCc
Q psy12791 77 GLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPL 156 (393)
Q Consensus 77 ~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~npt 156 (393)
.++++.|.-+..+...+.+.|..|.+.+..-. ......+..|..+...+..+.+.+.+..-.+..+|+++.|+...
T Consensus 7 i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 82 (140)
T 1lss_A 7 IIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKD----ICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEV 82 (140)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHH
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECCHH----HHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchH
Confidence 46667776654444445556766766544321 23333334477666656556777665433467888888765311
Q ss_pred ccccCHHHHHHHHHhC
Q psy12791 157 MTVFDVKAISAVVKQH 172 (393)
Q Consensus 157 G~~~~~~~l~~l~~~~ 172 (393)
-..+..++++.
T Consensus 83 -----~~~~~~~~~~~ 93 (140)
T 1lss_A 83 -----NLMSSLLAKSY 93 (140)
T ss_dssp -----HHHHHHHHHHT
T ss_pred -----HHHHHHHHHHc
Confidence 12455566665
No 249
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=48.59 E-value=46 Score=25.01 Aligned_cols=74 Identities=12% Similarity=0.038 Sum_probs=46.6
Q ss_pred cEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTN 154 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~n 154 (393)
..++++.|.-+..+...+.+.|-.|++.+..-. .... ++..|..++.-+..+.+.++++--++.++++++.++.
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~----~~~~-~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIETSRT----RVDE-LRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH----HHHH-HHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH----HHHH-HHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence 577888887765444444455666666554432 2222 3457888888777787777765334678888877763
No 250
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=48.54 E-value=37 Score=28.90 Aligned_cols=66 Identities=12% Similarity=0.164 Sum_probs=36.5
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~ 141 (393)
..+++|.|+..| .. ...+++.|-+|++..-.-..........++..|.++..+ ++.|.+++.+.++
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 467888888888 44 456778888887642211111112223334445555554 4447766666553
No 251
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=48.31 E-value=52 Score=27.96 Aligned_cols=77 Identities=9% Similarity=0.066 Sum_probs=41.6
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|+|+..| . +...+++.|-+|++..-.-...........+..|.++..+ +..|.+++.+.++ .+..
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 109 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLS 109 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 468888888887 4 4456778888877654322211112333334445454444 4446666655543 2455
Q ss_pred EEEEecC
Q psy12791 146 MVWIENP 152 (393)
Q Consensus 146 ~v~l~~p 152 (393)
.++-+..
T Consensus 110 ~li~nAg 116 (271)
T 4iin_A 110 YLVNNAG 116 (271)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 5555433
No 252
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=47.78 E-value=62 Score=24.08 Aligned_cols=73 Identities=15% Similarity=0.104 Sum_probs=45.0
Q ss_pred cEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPT 153 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~ 153 (393)
..++++.|.-+..+...+.+.|-.|++.+..-. .... ++..|..+...+..+.+.+.+.--.+.++|+++.++
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~----~~~~-~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE----KIEL-LEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSD 80 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH----HHHH-HHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH----HHHH-HHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCC
Confidence 567777776554444445556766666554322 1222 344578888877778888877643467888887663
No 253
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=47.65 E-value=1.8e+02 Score=27.08 Aligned_cols=123 Identities=17% Similarity=0.178 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHhCC----------CcEEEe----ccHHHH-H-HHHHHhcCCCCeEE-Ec-CCCccchHHHHHHhcccCC
Q psy12791 61 RRNLERCIASLEEA----------KHGLCY----SSGLGA-V-TAVTHLLSAGDHII-SG-DDVYGGTYRYFAQVAPKIG 122 (393)
Q Consensus 61 ~~~lr~~la~~~~~----------~~~i~~----~~G~~a-l-~~~~~~~~~gd~vl-~~-~~~y~~~~~~~~~~~~~~g 122 (393)
...+++.|.++++. +..|++ ++|=+- + .+...+.+.|.+|+ +. ++..++.+..+.......|
T Consensus 76 ~~~l~~eL~~~L~~~~~~~~~~~~p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~aa~eqL~~~~~~~g 155 (443)
T 3dm5_A 76 IKIVYEELTKFLGTEAKPIEIKEKPTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYH 155 (443)
T ss_dssp HHHHHHHHHHHTTSSCCCCCCCSSSEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSSTHHHHHHHHHHGGGT
T ss_pred HHHHHHHHHHHhcCcccccccCCCCeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcchhHHHHHHHHHHhcC
Confidence 34577777777763 123333 334222 2 23333445676653 33 3444444444555567778
Q ss_pred cEEEeeCCC-CHHHH-----HhhcCCCCcEEEEecCCC-Cc--ccccCHHHHHHHHHhCCCcEEEEeCccC
Q psy12791 123 LEVDFVDLR-KIENL-----IKYIKPNTKMVWIENPTN-PL--MTVFDVKAISAVVKQHPDILLVLDNTFL 184 (393)
Q Consensus 123 ~~v~~~~~~-d~~~l-----~~~l~~~~~~v~l~~p~n-pt--G~~~~~~~l~~l~~~~~~~~livDea~~ 184 (393)
+.+...+.. |+.++ ..+-..+..+|++..|.. +. .....+.++.+..+.. .+++|+|...+
T Consensus 156 vpv~~~~~~~dp~~i~~~al~~a~~~~~DvVIIDTaGrl~~d~~lm~el~~i~~~~~pd-~vlLVvDA~~g 225 (443)
T 3dm5_A 156 IEVFGNPQEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIHPH-EVILVIDGTIG 225 (443)
T ss_dssp CEEECCTTCCCHHHHHHHHHHHHHHTTCSEEEEECCCCSSCCHHHHHHHHHHHHHHCCS-EEEEEEEGGGG
T ss_pred CcEEecCCCCCHHHHHHHHHHHHHhCCCCEEEEECCCcccchHHHHHHHHHHHHhhcCc-eEEEEEeCCCc
Confidence 887765432 44332 222234578999987731 11 0111133333344445 68999998754
No 254
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=46.00 E-value=49 Score=27.71 Aligned_cols=76 Identities=12% Similarity=0.094 Sum_probs=43.2
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--CHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--KIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++.+..-. .........+.++..+..| |.+++.+.++ .+..
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 82 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAE----GAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID 82 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHH----HHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 467778888787 44 4567788888887654332 2333333335555555444 7666665543 2456
Q ss_pred EEEEecCCCC
Q psy12791 146 MVWIENPTNP 155 (393)
Q Consensus 146 ~v~l~~p~np 155 (393)
+++-+....+
T Consensus 83 ~lv~nAg~~~ 92 (247)
T 3rwb_A 83 ILVNNASIVP 92 (247)
T ss_dssp EEEECCCCCC
T ss_pred EEEECCCCCC
Confidence 6665443333
No 255
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=45.07 E-value=92 Score=25.24 Aligned_cols=68 Identities=13% Similarity=0.091 Sum_probs=41.6
Q ss_pred EEEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEec
Q psy12791 77 GLCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIEN 151 (393)
Q Consensus 77 ~i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~ 151 (393)
.+++++|+.-+ .++..+++.|.+|++..-.-.. ... ...+++++..++.|.+++.+.+. +..+|+.+.
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~--~~~~~~~~~~Dl~d~~~~~~~~~-~~d~vi~~a 75 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK----IKI--ENEHLKVKKADVSSLDEVCEVCK-GADAVISAF 75 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG----CCC--CCTTEEEECCCTTCHHHHHHHHT-TCSEEEECC
T ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc----chh--ccCceEEEEecCCCHHHHHHHhc-CCCEEEEeC
Confidence 46666666656 4455677788777765433221 110 11466777777779999988886 466666543
No 256
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=44.86 E-value=38 Score=29.98 Aligned_cols=93 Identities=13% Similarity=0.029 Sum_probs=53.5
Q ss_pred EEEeccHHHHH--HHHHHhcCCCCeEEE-cCCC-ccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCC-CCcEEEEec
Q psy12791 77 GLCYSSGLGAV--TAVTHLLSAGDHIIS-GDDV-YGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKP-NTKMVWIEN 151 (393)
Q Consensus 77 ~i~~~~G~~al--~~~~~~~~~gd~vl~-~~~~-y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~-~~~~v~l~~ 151 (393)
.|++++|+--+ .++..+++.|..|.+ .... -..............+++++..++.|.+.+.+++.+ +..+|+.+.
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~a 91 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVSTV 91 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEECC
Confidence 46666655555 344456666655543 3322 111110111123456899999999899999888863 456666543
Q ss_pred C-CCCcccccCHHHHHHHHHhCCC
Q psy12791 152 P-TNPLMTVFDVKAISAVVKQHPD 174 (393)
Q Consensus 152 p-~nptG~~~~~~~l~~l~~~~~~ 174 (393)
. .|..| -..+.+.|++. +
T Consensus 92 ~~~n~~~----~~~l~~aa~~~-g 110 (346)
T 3i6i_A 92 GGESILD----QIALVKAMKAV-G 110 (346)
T ss_dssp CGGGGGG----HHHHHHHHHHH-C
T ss_pred chhhHHH----HHHHHHHHHHc-C
Confidence 3 34333 46788888887 6
No 257
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=44.55 E-value=1.4e+02 Score=24.90 Aligned_cols=119 Identities=12% Similarity=0.084 Sum_probs=58.3
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE--EEeeCCCCHHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE--VDFVDLRKIEN 135 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~--v~~~~~~d~~~ 135 (393)
+...++-..++........+=+++|+-.. ..+...+.++.+|+..+..-. ........++..|.. +..+. .|..+
T Consensus 49 ~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~-~~~~a~~~~~~~g~~~~v~~~~-~d~~~ 126 (248)
T 3tfw_A 49 ANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAH-HAQVARENLQLAGVDQRVTLRE-GPALQ 126 (248)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHH-HHHHHHHHHHHTTCTTTEEEEE-SCHHH
T ss_pred HHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEE-cCHHH
Confidence 44444555555555555666677776554 334444443556766654332 111223333334432 33332 35555
Q ss_pred HHhhcCC--CCcEEEEecCCCCcccccCHHHHHHHHHhC--CCcEEEEeCccCc
Q psy12791 136 LIKYIKP--NTKMVWIENPTNPLMTVFDVKAISAVVKQH--PDILLVLDNTFLT 185 (393)
Q Consensus 136 l~~~l~~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~--~~~~livDea~~~ 185 (393)
....+.+ ...+|++..+ ......+.+.+.+. ||.++++|++...
T Consensus 127 ~l~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~~~~~~~ 174 (248)
T 3tfw_A 127 SLESLGECPAFDLIFIDAD------KPNNPHYLRWALRYSRPGTLIIGDNVVRD 174 (248)
T ss_dssp HHHTCCSCCCCSEEEECSC------GGGHHHHHHHHHHTCCTTCEEEEECCSGG
T ss_pred HHHhcCCCCCeEEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEeCCCcC
Confidence 4444433 4678887542 11223333333332 5778888887654
No 258
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=42.82 E-value=48 Score=28.33 Aligned_cols=76 Identities=9% Similarity=0.059 Sum_probs=40.7
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++....-..............|.++..+ ++.|.+++.+.++ .+..
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 107 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRID 107 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788888888 44 456778888887764433211111222222234444444 5557666665553 1455
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 108 ~lv~nA 113 (277)
T 4fc7_A 108 ILINCA 113 (277)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 259
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=42.79 E-value=50 Score=27.82 Aligned_cols=75 Identities=12% Similarity=0.118 Sum_probs=40.7
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEE--EeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEV--DFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v--~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-.|++..-.-...........+..+.++ ...++.|.+++.+.++ .+..
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id 87 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKID 87 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 467888888888 44 456778888877652221111122333334444444 4445557777666553 2455
Q ss_pred EEEEe
Q psy12791 146 MVWIE 150 (393)
Q Consensus 146 ~v~l~ 150 (393)
+++-+
T Consensus 88 ~lv~~ 92 (264)
T 3i4f_A 88 FLINN 92 (264)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 55543
No 260
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=42.66 E-value=83 Score=25.63 Aligned_cols=73 Identities=15% Similarity=0.022 Sum_probs=45.6
Q ss_pred EEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCC
Q psy12791 77 GLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPT 153 (393)
Q Consensus 77 ~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~ 153 (393)
.++++.|.-+..+...+.+.|..|++.+..-. ......+..|..++.-+..+.+.+.++--++.++|+++.++
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~----~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINKDRE----LCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEESCHH----HHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECCHH----HHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence 46677776554444445556666666554332 23343445688888877778888877644567888887665
No 261
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=42.50 E-value=77 Score=26.87 Aligned_cols=91 Identities=14% Similarity=0.162 Sum_probs=50.8
Q ss_pred EEeccHHHHH-H-HHHHhcCC--CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCC
Q psy12791 78 LCYSSGLGAV-T-AVTHLLSA--GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPT 153 (393)
Q Consensus 78 i~~~~G~~al-~-~~~~~~~~--gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~ 153 (393)
+++|+|+.-+ . ++..+++. |.+|.+....-.. ... +...+++++..+..|.+.+.+.+. +...|+.+...
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~----~~~-l~~~~~~~~~~D~~d~~~l~~~~~-~~d~vi~~a~~ 76 (287)
T 2jl1_A 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEK----AST-LADQGVEVRHGDYNQPESLQKAFA-GVSKLLFISGP 76 (287)
T ss_dssp EEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT----THH-HHHTTCEEEECCTTCHHHHHHHTT-TCSEEEECCCC
T ss_pred EEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHH----HhH-HhhcCCeEEEeccCCHHHHHHHHh-cCCEEEEcCCC
Confidence 5666665556 4 44556665 6666543221111 111 122467888888889999988886 46666655443
Q ss_pred CCcc--cccCHHHHHHHHHhCCCc
Q psy12791 154 NPLM--TVFDVKAISAVVKQHPDI 175 (393)
Q Consensus 154 nptG--~~~~~~~l~~l~~~~~~~ 175 (393)
++.. .+.....+.+.|++. ++
T Consensus 77 ~~~~~~n~~~~~~l~~a~~~~-~~ 99 (287)
T 2jl1_A 77 HYDNTLLIVQHANVVKAARDA-GV 99 (287)
T ss_dssp CSCHHHHHHHHHHHHHHHHHT-TC
T ss_pred CcCchHHHHHHHHHHHHHHHc-CC
Confidence 2211 122245677777776 53
No 262
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=42.41 E-value=74 Score=26.91 Aligned_cols=77 Identities=13% Similarity=0.152 Sum_probs=40.8
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|+|+..| .. ...+++.|-+|++....-..............+ +.+...++.|.+++.+.+. .+..
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id 105 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVD 105 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888888888 44 456778888887654222211111112222334 4445555557666665543 1455
Q ss_pred EEEEecC
Q psy12791 146 MVWIENP 152 (393)
Q Consensus 146 ~v~l~~p 152 (393)
+++.+..
T Consensus 106 ~li~nAg 112 (269)
T 3gk3_A 106 VLINNAG 112 (269)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6555433
No 263
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=42.25 E-value=57 Score=27.83 Aligned_cols=29 Identities=21% Similarity=0.215 Sum_probs=20.6
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGD 104 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~ 104 (393)
..+++|.|+..| .. ...+++.|-+|++.+
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 41 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFD 41 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence 467788888888 44 456778888887653
No 264
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=41.90 E-value=69 Score=29.05 Aligned_cols=68 Identities=12% Similarity=0.102 Sum_probs=45.5
Q ss_pred cCCCCeEEEcCCCccch------HHHHHHhcccCCcEEEeeCCC-------------CHHHHHhhcC-CCCcEEEEecCC
Q psy12791 94 LSAGDHIISGDDVYGGT------YRYFAQVAPKIGLEVDFVDLR-------------KIENLIKYIK-PNTKMVWIENPT 153 (393)
Q Consensus 94 ~~~gd~vl~~~~~y~~~------~~~~~~~~~~~g~~v~~~~~~-------------d~~~l~~~l~-~~~~~v~l~~p~ 153 (393)
+++||+|-+..|+.+.. +......++.+|.+|+.-+.- ..++|.+++. ++.++|+..---
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 67899999998886532 223344567789999876642 2567777765 457888876655
Q ss_pred CCcccccC
Q psy12791 154 NPLMTVFD 161 (393)
Q Consensus 154 nptG~~~~ 161 (393)
.-+-.++|
T Consensus 120 yga~rlLp 127 (371)
T 3tla_A 120 DNSNSLLP 127 (371)
T ss_dssp SCGGGGGG
T ss_pred ccHHHHHh
Confidence 55555554
No 265
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=41.78 E-value=45 Score=28.50 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=51.4
Q ss_pred EEeccHHHHH-H-HHHHhcCC-CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCC-
Q psy12791 78 LCYSSGLGAV-T-AVTHLLSA-GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPT- 153 (393)
Q Consensus 78 i~~~~G~~al-~-~~~~~~~~-gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~- 153 (393)
|++|+|+.-+ . ++..+.+. |..|.+..-.-.. . ......+++++..+..|.+.+.+++. +...|+.+...
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~----~-~~~~~~~v~~~~~D~~d~~~l~~~~~-~~d~vi~~a~~~ 76 (289)
T 3e48_A 3 IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEK----V-PDDWRGKVSVRQLDYFNQESMVEAFK-GMDTVVFIPSII 76 (289)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGG----S-CGGGBTTBEEEECCTTCHHHHHHHTT-TCSEEEECCCCC
T ss_pred EEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHH----H-HHhhhCCCEEEEcCCCCHHHHHHHHh-CCCEEEEeCCCC
Confidence 5565555445 3 33445554 6666543222110 1 11234688888888889999999886 56666655332
Q ss_pred CCcc-cccCHHHHHHHHHhCCCc
Q psy12791 154 NPLM-TVFDVKAISAVVKQHPDI 175 (393)
Q Consensus 154 nptG-~~~~~~~l~~l~~~~~~~ 175 (393)
++.. .+.....+.+.|++. ++
T Consensus 77 ~~~~~~~~~~~~l~~aa~~~-gv 98 (289)
T 3e48_A 77 HPSFKRIPEVENLVYAAKQS-GV 98 (289)
T ss_dssp CSHHHHHHHHHHHHHHHHHT-TC
T ss_pred ccchhhHHHHHHHHHHHHHc-CC
Confidence 2211 122356778888887 53
No 266
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=40.88 E-value=71 Score=26.58 Aligned_cols=71 Identities=11% Similarity=0.114 Sum_probs=42.3
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCC------CCcEE
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKP------NTKMV 147 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~------~~~~v 147 (393)
..+++|.|+..| .. ...+++.|-+|++..-.-. ......+..|+.....++.|.+++++.++. +..++
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 81 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEG----PLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV 81 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 357777777777 44 4567778888876543221 233333344666677777787777665542 35666
Q ss_pred EEe
Q psy12791 148 WIE 150 (393)
Q Consensus 148 ~l~ 150 (393)
+-+
T Consensus 82 vn~ 84 (245)
T 1uls_A 82 VHY 84 (245)
T ss_dssp EEC
T ss_pred EEC
Confidence 544
No 267
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=40.60 E-value=53 Score=27.95 Aligned_cols=72 Identities=10% Similarity=0.133 Sum_probs=41.7
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe--eCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF--VDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~--~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-.|++....-. ......+..+.++.. .++.|.+++.+.++ .+..
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTRED----KLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 578888888888 44 4567788888877643322 233333444544444 45557776666553 2455
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 104 ~lvnnA 109 (266)
T 3grp_A 104 ILVNNA 109 (266)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665443
No 268
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=40.10 E-value=43 Score=28.71 Aligned_cols=74 Identities=14% Similarity=0.106 Sum_probs=42.1
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEE--EeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEV--DFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v--~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++.+..-. .........+.++ +..++.|.+++++.++ .+..
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNED----AAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHH----HHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788888888 44 4567788888877653322 2333333334344 4455557776666553 1456
Q ss_pred EEEEecCC
Q psy12791 146 MVWIENPT 153 (393)
Q Consensus 146 ~v~l~~p~ 153 (393)
+++-+...
T Consensus 104 ~lv~nAg~ 111 (277)
T 4dqx_A 104 VLVNNAGF 111 (277)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 66554433
No 269
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=40.05 E-value=1.3e+02 Score=24.32 Aligned_cols=120 Identities=14% Similarity=0.108 Sum_probs=56.9
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE--EEeeCCCCHHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE--VDFVDLRKIEN 135 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~--v~~~~~~d~~~ 135 (393)
+...++-..++........+=+++|+-.. ..+...+.++.+|+..+..-. ........++..|.. +..+. .|..+
T Consensus 50 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~-~d~~~ 127 (225)
T 3tr6_A 50 PEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEK-STALAKEYWEKAGLSDKIGLRL-SPAKD 127 (225)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHH-HHHHHHHHHHHTTCTTTEEEEE-SCHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHH-HHHHHHHHHHHCCCCCceEEEe-CCHHH
Confidence 33444445555554444566667776554 334444444556766665432 112233333444432 33332 24433
Q ss_pred HHhhcC-----CCCcEEEEecCCCCcccccCHHHHHHHHHhC--CCcEEEEeCccCcc
Q psy12791 136 LIKYIK-----PNTKMVWIENPTNPLMTVFDVKAISAVVKQH--PDILLVLDNTFLTA 186 (393)
Q Consensus 136 l~~~l~-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~--~~~~livDea~~~~ 186 (393)
....+. ....+|++..+ ......+.+.+.+. ||..+++|++...+
T Consensus 128 ~~~~~~~~~~~~~fD~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g 179 (225)
T 3tr6_A 128 TLAELIHAGQAWQYDLIYIDAD------KANTDLYYEESLKLLREGGLIAVDNVLRRG 179 (225)
T ss_dssp HHHHHHTTTCTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGG
T ss_pred HHHHhhhccCCCCccEEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCCcCC
Confidence 332222 34577776443 11233333333332 47788888876543
No 270
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=39.80 E-value=49 Score=27.48 Aligned_cols=97 Identities=8% Similarity=0.069 Sum_probs=50.7
Q ss_pred HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCH
Q psy12791 84 LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDV 162 (393)
Q Consensus 84 ~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 162 (393)
++++ ..+..+...|.++++..|.-...+ .-..+....|.+..-++..+.+++.+.+..+...|.|.=.+.-+-. -+
T Consensus 42 TT~Llr~~~r~~~~g~kvli~kp~~D~R~-~~~~I~Sr~G~~~~a~~v~~~~di~~~i~~~~dvV~IDEaQFf~~~--~v 118 (219)
T 3e2i_A 42 SEELIRRLRRGIYAKQKVVVFKPAIDDRY-HKEKVVSHNGNAIEAINISKASEIMTHDLTNVDVIGIDEVQFFDDE--IV 118 (219)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEC------------CBTTBCCEEEEESSGGGGGGSCCTTCSEEEECCGGGSCTH--HH
T ss_pred HHHHHHHHHHHHHcCCceEEEEeccCCcc-hhhhHHHhcCCceeeEEeCCHHHHHHHHhcCCCEEEEechhcCCHH--HH
Confidence 4454 445555556777877766554321 1234556677666655555566666666556777777665543311 14
Q ss_pred HHHHHHHHhCCCcEEEEeCccCc
Q psy12791 163 KAISAVVKQHPDILLVLDNTFLT 185 (393)
Q Consensus 163 ~~l~~l~~~~~~~~livDea~~~ 185 (393)
+.+.+++ .. |+.|++=.--.+
T Consensus 119 ~~l~~la-~~-gi~Vi~~GLd~D 139 (219)
T 3e2i_A 119 SIVEKLS-AD-GHRVIVAGLDMD 139 (219)
T ss_dssp HHHHHHH-HT-TCEEEEEEESBC
T ss_pred HHHHHHH-HC-CCEEEEeecccc
Confidence 4555555 45 777777554333
No 271
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=39.50 E-value=91 Score=26.64 Aligned_cols=78 Identities=10% Similarity=0.026 Sum_probs=41.4
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhc-ccCCcEEEeeC--CCCHHHHHhhcC------CCC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVA-PKIGLEVDFVD--LRKIENLIKYIK------PNT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~-~~~g~~v~~~~--~~d~~~l~~~l~------~~~ 144 (393)
..+++|.|+..| .. ...+++.|-+|++....-........... ...+.++..+. +.|.+++.+.++ .+.
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 105 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGA 105 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCC
Confidence 467788888887 44 45677888888876542221111111112 22244555554 447666665553 245
Q ss_pred cEEEEecCC
Q psy12791 145 KMVWIENPT 153 (393)
Q Consensus 145 ~~v~l~~p~ 153 (393)
.+++-+...
T Consensus 106 D~lv~nAg~ 114 (281)
T 3v2h_A 106 DILVNNAGV 114 (281)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 666554333
No 272
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=39.10 E-value=91 Score=23.70 Aligned_cols=96 Identities=13% Similarity=-0.005 Sum_probs=52.8
Q ss_pred cEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcc-cCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAP-KIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTN 154 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~-~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~n 154 (393)
..++++.|.-+..++..+...|-.|++.+..-.. . ..++ ..|..+...+..+.+.+.+.--.+..+|+++.++.
T Consensus 21 ~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~----~-~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~ 95 (155)
T 2g1u_A 21 YIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYA----F-HRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD 95 (155)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG----G-GGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred cEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH----H-HHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence 5777888877654444444556666665443221 2 2233 56777665555566666654123578888877652
Q ss_pred CcccccCHHHHHHHHHh-CCCcEEEEeC
Q psy12791 155 PLMTVFDVKAISAVVKQ-HPDILLVLDN 181 (393)
Q Consensus 155 ptG~~~~~~~l~~l~~~-~~~~~livDe 181 (393)
. ....+..+++. .+...++...
T Consensus 96 ~-----~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 96 S-----TNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp H-----HHHHHHHHHHHTSCCSEEEEEC
T ss_pred H-----HHHHHHHHHHHHCCCCeEEEEE
Confidence 1 23455666676 4334455443
No 273
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=38.88 E-value=81 Score=26.62 Aligned_cols=74 Identities=12% Similarity=-0.027 Sum_probs=39.0
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEE-cCCCccchHHHHHHhcccCC--cEEEeeCCCCHHHHHhhcC------CCC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIIS-GDDVYGGTYRYFAQVAPKIG--LEVDFVDLRKIENLIKYIK------PNT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~-~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l~------~~~ 144 (393)
..+++|.|+..| .. ...+++.|-.|++ ....-.. ...........+ +.+...++.|.+++.+.+. .+.
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 105 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAG-AQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAW 105 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHH-HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 468888888888 44 4567788888755 3222111 111122222333 3444455557776666553 145
Q ss_pred cEEEEe
Q psy12791 145 KMVWIE 150 (393)
Q Consensus 145 ~~v~l~ 150 (393)
..++.+
T Consensus 106 d~li~n 111 (267)
T 4iiu_A 106 YGVVSN 111 (267)
T ss_dssp SEEEEC
T ss_pred cEEEEC
Confidence 555544
No 274
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=38.88 E-value=34 Score=29.53 Aligned_cols=62 Identities=10% Similarity=0.118 Sum_probs=37.8
Q ss_pred cEEEeccHHHHH-HHH-HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-TAV-THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~-~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~ 141 (393)
..+++|.|+..| .++ ..+.+.|-.|++.+-.-. .....++..|.++..+ ++.|.+++++.++
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~----~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~ 95 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKD----VLDAAIAEIGGGAVGIQADSANLAELDRLYE 95 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHCTTCEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHcCCCeEEEEecCCCHHHHHHHHH
Confidence 467777888888 544 567888988887654322 3444445555555444 4447666665543
No 275
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=38.83 E-value=85 Score=28.90 Aligned_cols=94 Identities=16% Similarity=0.154 Sum_probs=57.7
Q ss_pred cEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
..|+++.|.-+-.+...+...|-.|++.+..-. .. ..++..|..++.-+..+.+.|+++--++.++|+++.++.
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~----~v-~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~- 79 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD----HI-ETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDP- 79 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH----HH-HHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSH-
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH----HH-HHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCCh-
Confidence 467888887664333444455666666554432 12 234567888888888888888877445688888877652
Q ss_pred cccccCHHHHHHHHHhC-CCcEEEE
Q psy12791 156 LMTVFDVKAISAVVKQH-PDILLVL 179 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~-~~~~liv 179 (393)
..-..+...+++. |++.+|+
T Consensus 80 ----~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 80 ----QTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp ----HHHHHHHHHHHHHCTTCEEEE
T ss_pred ----HHHHHHHHHHHHhCCCCeEEE
Confidence 1233456666665 4555544
No 276
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=38.67 E-value=72 Score=29.84 Aligned_cols=93 Identities=16% Similarity=0.042 Sum_probs=57.8
Q ss_pred cEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
..++++.|..+...+..+++.|-.|.+.+|.... .+.......+++++.-.. +.+++. +..+|+. .|++|
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~---~~~~l~~~~~i~~~~~~~-~~~~l~-----~~~lVi~-at~~~ 83 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEAGARLTVNALTFIP---QFTVWANEGMLTLVEGPF-DETLLD-----SCWLAIA-ATDDD 83 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCH---HHHHHHTTTSCEEEESSC-CGGGGT-----TCSEEEE-CCSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCH---HHHHHHhcCCEEEEECCC-CccccC-----CccEEEE-cCCCH
Confidence 5788899988886677777788788877777654 334433434555554332 222221 3455554 55544
Q ss_pred cccccCHHHHHHHHHhCCCcEE-EEeCcc
Q psy12791 156 LMTVFDVKAISAVVKQHPDILL-VLDNTF 183 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~~~~~l-ivDea~ 183 (393)
. .-..+.+.|++. ++++ ++|+.-
T Consensus 84 ~----~n~~i~~~a~~~-~i~vn~~d~~e 107 (457)
T 1pjq_A 84 T----VNQRVSDAAESR-RIFCNVVDAPK 107 (457)
T ss_dssp H----HHHHHHHHHHHT-TCEEEETTCTT
T ss_pred H----HHHHHHHHHHHc-CCEEEECCCcc
Confidence 2 246788899999 9886 577754
No 277
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=38.59 E-value=57 Score=27.67 Aligned_cols=89 Identities=9% Similarity=0.102 Sum_probs=47.6
Q ss_pred EEeccHHHHH--HHHHHhcCC--CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCC
Q psy12791 78 LCYSSGLGAV--TAVTHLLSA--GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPT 153 (393)
Q Consensus 78 i~~~~G~~al--~~~~~~~~~--gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~ 153 (393)
+++|+|+.-+ .++..+++. |..|.+..-.-.. ... ....+++++..+..|.+.+.+.+. +...|+.+...
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~----~~~-~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vi~~a~~ 75 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAK----AQA-LAAQGITVRQADYGDEAALTSALQ-GVEKLLLISSS 75 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT----CHH-HHHTTCEEEECCTTCHHHHHHHTT-TCSEEEECC--
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHh----hhh-hhcCCCeEEEcCCCCHHHHHHHHh-CCCEEEEeCCC
Confidence 4555555556 444556665 6666543221111 111 122467888888889999988886 45666654433
Q ss_pred CCcccccCHHHHHHHHHhC
Q psy12791 154 NPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 154 nptG~~~~~~~l~~l~~~~ 172 (393)
++...+.-...+.+.|++.
T Consensus 76 ~~~~~~~~~~~l~~a~~~~ 94 (286)
T 2zcu_A 76 EVGQRAPQHRNVINAAKAA 94 (286)
T ss_dssp ------CHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHc
Confidence 2222223356777788776
No 278
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=38.46 E-value=54 Score=27.92 Aligned_cols=66 Identities=11% Similarity=0.014 Sum_probs=35.7
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~ 141 (393)
..+++|.|+..| .. ...+++.|-.|++..-.-...........+..|.++..+ ++.|.+++++.++
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 97 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFA 97 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 567888888887 44 456777888887642111111112222233445455444 4457666666553
No 279
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=38.16 E-value=1.2e+02 Score=26.47 Aligned_cols=66 Identities=12% Similarity=0.099 Sum_probs=37.3
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCc---------cchHHHHHHhcccCCcEEEeeCCC--CHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVY---------GGTYRYFAQVAPKIGLEVDFVDLR--KIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y---------~~~~~~~~~~~~~~g~~v~~~~~~--d~~~l~~~l~ 141 (393)
..+++|.|+..| .. ...+++.|-.|++.+..- ..........+...|.++..+..| |.+++.+.++
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 106 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQ 106 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 467888888888 44 456778888887764320 111112222334446666665554 6666655543
No 280
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=38.04 E-value=1.2e+02 Score=25.07 Aligned_cols=77 Identities=8% Similarity=-0.009 Sum_probs=40.9
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCC------CCcEE
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKP------NTKMV 147 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~------~~~~v 147 (393)
..+++|.|+..| . +...+++.|-+|++....-..............++.+...++.|.+++.+.++. +..++
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 86 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL 86 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 467788887777 4 445677778777765432111000111111113455666666677776665542 45666
Q ss_pred EEecC
Q psy12791 148 WIENP 152 (393)
Q Consensus 148 ~l~~p 152 (393)
+.+..
T Consensus 87 i~~Ag 91 (251)
T 1zk4_A 87 VNNAG 91 (251)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65443
No 281
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=37.67 E-value=87 Score=26.65 Aligned_cols=77 Identities=16% Similarity=0.124 Sum_probs=41.1
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCC--------c----cchHHHHHHhcccCCcEEEee--CCCCHHHHHhh
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDV--------Y----GGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKY 139 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~--------y----~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~ 139 (393)
..+++|.|+..| .. ...+++.|-+|++.+.. | ...........+..|.++..+ ++.|.+++++.
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 95 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALREL 95 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 467788888888 44 45677888888775321 1 111111222233445555544 44476666665
Q ss_pred cCC------CCcEEEEecC
Q psy12791 140 IKP------NTKMVWIENP 152 (393)
Q Consensus 140 l~~------~~~~v~l~~p 152 (393)
++. +..+++-+..
T Consensus 96 ~~~~~~~~g~id~lvnnAg 114 (280)
T 3pgx_A 96 VADGMEQFGRLDVVVANAG 114 (280)
T ss_dssp HHHHHHHHCCCCEEEECCC
T ss_pred HHHHHHHcCCCCEEEECCC
Confidence 531 4566655433
No 282
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=36.98 E-value=88 Score=26.30 Aligned_cols=75 Identities=13% Similarity=0.104 Sum_probs=40.8
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEc-CCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcCC------CC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISG-DDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIKP------NT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~-~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~~------~~ 144 (393)
..+++|.|+..| .. ...+++.|-+|++. ...-.. .......++..|.++..+ ++.|.+++.+.++. +.
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKA-ALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRL 83 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 467888888888 44 45677888887764 332221 111222233445555544 44577666665531 34
Q ss_pred cEEEEec
Q psy12791 145 KMVWIEN 151 (393)
Q Consensus 145 ~~v~l~~ 151 (393)
.+++-+.
T Consensus 84 d~lv~nA 90 (258)
T 3oid_A 84 DVFVNNA 90 (258)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 5655443
No 283
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=36.88 E-value=67 Score=28.53 Aligned_cols=69 Identities=12% Similarity=0.080 Sum_probs=45.5
Q ss_pred hcCCCCeEEEcCCCccc------hHHHHHHhcccCCcEEEeeCCC-------------CHHHHHhhcC-CCCcEEEEecC
Q psy12791 93 LLSAGDHIISGDDVYGG------TYRYFAQVAPKIGLEVDFVDLR-------------KIENLIKYIK-PNTKMVWIENP 152 (393)
Q Consensus 93 ~~~~gd~vl~~~~~y~~------~~~~~~~~~~~~g~~v~~~~~~-------------d~~~l~~~l~-~~~~~v~l~~p 152 (393)
.+++||+|-+..|+.+. .+....+.++.+|.+|+.-+.- ..++|.+++. ++.++|+..--
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 46899999988887532 2223344567889999876642 2566777664 45788887666
Q ss_pred CCCcccccC
Q psy12791 153 TNPLMTVFD 161 (393)
Q Consensus 153 ~nptG~~~~ 161 (393)
-.-+-.++|
T Consensus 88 G~g~~rlL~ 96 (327)
T 4h1h_A 88 GFNSNQLLP 96 (327)
T ss_dssp CSCGGGGGG
T ss_pred chhHHHHhh
Confidence 555555555
No 284
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=36.79 E-value=1.5e+02 Score=23.93 Aligned_cols=122 Identities=14% Similarity=0.143 Sum_probs=58.9
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE--EEeeCCCCHHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE--VDFVDLRKIEN 135 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~--v~~~~~~d~~~ 135 (393)
+...++-..++........+=+++|+-.. ..+...+.++.+|+..+..-. ........++..|.. +..+. .|..+
T Consensus 44 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~-~d~~~ 121 (221)
T 3u81_A 44 DAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPD-CAAITQQMLNFAGLQDKVTILN-GASQD 121 (221)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHH-HHHHHHHHHHHHTCGGGEEEEE-SCHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChH-HHHHHHHHHHHcCCCCceEEEE-CCHHH
Confidence 33444444444444544566666665554 334444455667776665432 122223333334432 43332 35544
Q ss_pred HHhhcC-----CCCcEEEEecCCCCcccccCHHHHHHHHHhC-CCcEEEEeCccCc
Q psy12791 136 LIKYIK-----PNTKMVWIENPTNPLMTVFDVKAISAVVKQH-PDILLVLDNTFLT 185 (393)
Q Consensus 136 l~~~l~-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~~~~livDea~~~ 185 (393)
+...+. ....+|++.... ....+..++.+.++.- ||..+++|++...
T Consensus 122 ~l~~~~~~~~~~~fD~V~~d~~~---~~~~~~~~~~~~~~~LkpgG~lv~~~~~~~ 174 (221)
T 3u81_A 122 LIPQLKKKYDVDTLDMVFLDHWK---DRYLPDTLLLEKCGLLRKGTVLLADNVIVP 174 (221)
T ss_dssp HGGGTTTTSCCCCCSEEEECSCG---GGHHHHHHHHHHTTCCCTTCEEEESCCCCC
T ss_pred HHHHHHHhcCCCceEEEEEcCCc---ccchHHHHHHHhccccCCCeEEEEeCCCCc
Confidence 444443 346788875432 1222222333333222 6888999987653
No 285
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=36.15 E-value=89 Score=25.94 Aligned_cols=75 Identities=11% Similarity=0.119 Sum_probs=38.9
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCC-CccchHHHHHHhcccCCcEE--EeeCCCCHHHHHhhcCC------CC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDD-VYGGTYRYFAQVAPKIGLEV--DFVDLRKIENLIKYIKP------NT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~-~y~~~~~~~~~~~~~~g~~v--~~~~~~d~~~l~~~l~~------~~ 144 (393)
..+++|.|+..| .. ...+++.|.+|++... .-. ........++..|.++ ...++.|.+++.+.++. +.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 83 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQ-KANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQV 83 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHH-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 357788777777 44 4567778888776432 211 1111111222234344 44455577766665542 45
Q ss_pred cEEEEec
Q psy12791 145 KMVWIEN 151 (393)
Q Consensus 145 ~~v~l~~ 151 (393)
.+++-+.
T Consensus 84 d~lv~nA 90 (246)
T 2uvd_A 84 DILVNNA 90 (246)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 6665443
No 286
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=36.10 E-value=37 Score=29.43 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=37.7
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~ 141 (393)
..+++|.|+..| .. ...+++.|-+|++..-.-...........+..|.++..+ ++.|.+++.+.++
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 117 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQ 117 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 467888888888 44 456778888887654332221222333344456555555 4447666665543
No 287
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=36.02 E-value=1.3e+02 Score=25.30 Aligned_cols=66 Identities=9% Similarity=0.091 Sum_probs=36.6
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCC-cc-chHHHHHHhcccCCcEEEeeCC--CCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDV-YG-GTYRYFAQVAPKIGLEVDFVDL--RKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~-y~-~~~~~~~~~~~~~g~~v~~~~~--~d~~~l~~~l~ 141 (393)
..+++|.|+..| .. ...+++.|-+|++.... -. .........++..|.++..+.. .|.+++.+.++
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 467788888888 44 45677888888774221 11 1111122223344666665544 47766666553
No 288
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=35.60 E-value=67 Score=26.96 Aligned_cols=71 Identities=10% Similarity=0.029 Sum_probs=35.9
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE--EEeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE--VDFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~--v~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++....-.. .....+..+.+ ....++.|.+++.+.++ .+..
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 83 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPA----GEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVH 83 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHH----HHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788888887 44 45677888888765443331 22333333433 44445557766666553 1455
Q ss_pred EEEEe
Q psy12791 146 MVWIE 150 (393)
Q Consensus 146 ~v~l~ 150 (393)
+++-+
T Consensus 84 ~lv~n 88 (257)
T 3tpc_A 84 GLVNC 88 (257)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 55544
No 289
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=35.58 E-value=63 Score=27.06 Aligned_cols=119 Identities=15% Similarity=0.156 Sum_probs=54.7
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCCCCHHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDLRKIEN 135 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~~d~~~ 135 (393)
+...++-..++...+....+=+++|+-.. ..+...+.++.+|+..+..-... ......++..|. ++..+. .|..+
T Consensus 46 ~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~-~~a~~~~~~~g~~~~i~~~~-gda~~ 123 (242)
T 3r3h_A 46 PEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWT-KHAHPYWREAKQEHKIKLRL-GPALD 123 (242)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSC-CCSHHHHHHTTCTTTEEEEE-SCHHH
T ss_pred HHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHH-HHHHHHHHHcCCCCcEEEEE-cCHHH
Confidence 44455555556555555555555554433 33333344455666554432100 012222333343 233332 24444
Q ss_pred HHhhc-----CCCCcEEEEecCCCCcccccCHHHHHHHHHhC--CCcEEEEeCccCc
Q psy12791 136 LIKYI-----KPNTKMVWIENPTNPLMTVFDVKAISAVVKQH--PDILLVLDNTFLT 185 (393)
Q Consensus 136 l~~~l-----~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~--~~~~livDea~~~ 185 (393)
+...+ .....+|++..+ ......+.+.+.+. ||.++++|++...
T Consensus 124 ~l~~~~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 174 (242)
T 3r3h_A 124 TLHSLLNEGGEHQFDFIFIDAD------KTNYLNYYELALKLVTPKGLIAIDNIFWD 174 (242)
T ss_dssp HHHHHHHHHCSSCEEEEEEESC------GGGHHHHHHHHHHHEEEEEEEEEECSSSS
T ss_pred HHHHHhhccCCCCEeEEEEcCC------hHHhHHHHHHHHHhcCCCeEEEEECCccC
Confidence 33333 245678887654 11222222222221 4778888887654
No 290
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=35.55 E-value=98 Score=25.71 Aligned_cols=90 Identities=18% Similarity=0.146 Sum_probs=51.7
Q ss_pred cEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
..++++.|..+...+..+++.|-.|.+.+|.... .+...+...+++++.-+. +.+++ .+..+|+. .++++
T Consensus 33 ~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~---~l~~l~~~~~i~~i~~~~-~~~dL-----~~adLVIa-AT~d~ 102 (223)
T 3dfz_A 33 SVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSA---EINEWEAKGQLRVKRKKV-GEEDL-----LNVFFIVV-ATNDQ 102 (223)
T ss_dssp CEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCH---HHHHHHHTTSCEEECSCC-CGGGS-----SSCSEEEE-CCCCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCH---HHHHHHHcCCcEEEECCC-CHhHh-----CCCCEEEE-CCCCH
Confidence 6889999988876677777778778777787664 344444444555543332 22222 23556654 34433
Q ss_pred cccccCHHHHHHHHHhCCCcEE-EEeC
Q psy12791 156 LMTVFDVKAISAVVKQHPDILL-VLDN 181 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~~~~~l-ivDe 181 (393)
.--..+.+.|+ . ++++ ++|+
T Consensus 103 ----~~N~~I~~~ak-~-gi~VNvvD~ 123 (223)
T 3dfz_A 103 ----AVNKFVKQHIK-N-DQLVNMASS 123 (223)
T ss_dssp ----HHHHHHHHHSC-T-TCEEEC---
T ss_pred ----HHHHHHHHHHh-C-CCEEEEeCC
Confidence 22456777777 6 7653 4444
No 291
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=35.43 E-value=1.9e+02 Score=24.01 Aligned_cols=119 Identities=13% Similarity=0.134 Sum_probs=56.8
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCCCCHHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDLRKIEN 135 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~~d~~~ 135 (393)
+....+-..+.+..+....+=+++|+-.. ..+...+.++.+|+..+..-. ........++..|. ++..+. .|..+
T Consensus 65 ~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~-~~~~a~~~~~~~g~~~~i~~~~-gda~~ 142 (247)
T 1sui_A 65 ADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKE-NYELGLPVIKKAGVDHKIDFRE-GPALP 142 (247)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCH-HHHHHHHHHHHTTCGGGEEEEE-SCHHH
T ss_pred HHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCCeEEEE-CCHHH
Confidence 44444545555555555566666665543 333334444556766654432 11223333344454 343332 24433
Q ss_pred HHhhc------CCCCcEEEEecCCCCcccccCHHHHHHHHHhC--CCcEEEEeCccCc
Q psy12791 136 LIKYI------KPNTKMVWIENPTNPLMTVFDVKAISAVVKQH--PDILLVLDNTFLT 185 (393)
Q Consensus 136 l~~~l------~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~--~~~~livDea~~~ 185 (393)
+...+ ...-.+|++.... .....+.+.+.+. ||.++++|++...
T Consensus 143 ~l~~l~~~~~~~~~fD~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 194 (247)
T 1sui_A 143 VLDEMIKDEKNHGSYDFIFVDADK------DNYLNYHKRLIDLVKVGGVIGYDNTLWN 194 (247)
T ss_dssp HHHHHHHSGGGTTCBSEEEECSCS------TTHHHHHHHHHHHBCTTCCEEEECTTGG
T ss_pred HHHHHHhccCCCCCEEEEEEcCch------HHHHHHHHHHHHhCCCCeEEEEecCCcC
Confidence 32222 2346788875431 1233333333332 4777888887654
No 292
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=35.14 E-value=96 Score=25.47 Aligned_cols=89 Identities=8% Similarity=0.015 Sum_probs=50.0
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCC-CeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecC
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAG-DHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENP 152 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~g-d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p 152 (393)
..+++|.|+..+ . ++..+++.| -.|++..-.-.. ... ....+++++..++.|.+++.+.+. +..+|+.+..
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~----~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vv~~a~ 97 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAK----IHK-PYPTNSQIIMGDVLNHAALKQAMQ-GQDIVYANLT 97 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGG----SCS-SCCTTEEEEECCTTCHHHHHHHHT-TCSEEEEECC
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhh----hcc-cccCCcEEEEecCCCHHHHHHHhc-CCCEEEEcCC
Confidence 357777766667 4 445677778 456553322110 111 122366777777779999988886 4566665433
Q ss_pred CCCcccccCHHHHHHHHHhC
Q psy12791 153 TNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 153 ~nptG~~~~~~~l~~l~~~~ 172 (393)
. .......+.+.+.+++.
T Consensus 98 ~--~~~~~~~~~~~~~~~~~ 115 (236)
T 3qvo_A 98 G--EDLDIQANSVIAAMKAC 115 (236)
T ss_dssp S--TTHHHHHHHHHHHHHHT
T ss_pred C--CchhHHHHHHHHHHHHc
Confidence 2 11222345566666665
No 293
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=34.69 E-value=1.4e+02 Score=25.33 Aligned_cols=64 Identities=13% Similarity=0.016 Sum_probs=39.7
Q ss_pred cEEEeccHHHHH-HHH-HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--CHHHHHhhc
Q psy12791 76 HGLCYSSGLGAV-TAV-THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--KIENLIKYI 140 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~-~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--d~~~l~~~l 140 (393)
..+++|.|+..| .++ ..+.+.|-+|++.+..-.. .......++..|.++..+..| |.+++++.+
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~-~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~ 77 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATL-LAESVDTLTRKGYDAHGVAFDVTDELAIEAAF 77 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHH-HHHHHHHHHHTTCCEEECCCCTTCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence 477888888888 554 5678889899887653321 111222334557777777665 666665544
No 294
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=34.65 E-value=83 Score=27.98 Aligned_cols=69 Identities=17% Similarity=0.219 Sum_probs=45.8
Q ss_pred hcCCCCeEEEcCCCccch------HHHHHHhcccCCcEEEeeCCC-------------CHHHHHhhcC-CCCcEEEEecC
Q psy12791 93 LLSAGDHIISGDDVYGGT------YRYFAQVAPKIGLEVDFVDLR-------------KIENLIKYIK-PNTKMVWIENP 152 (393)
Q Consensus 93 ~~~~gd~vl~~~~~y~~~------~~~~~~~~~~~g~~v~~~~~~-------------d~~~l~~~l~-~~~~~v~l~~p 152 (393)
.+++||+|-+..|+.+.. +......++.+|.+|+.-+.- ..++|.+++. ++.++|+..--
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 368999999888876543 222344567799999976642 2566777665 45788887665
Q ss_pred CCCcccccC
Q psy12791 153 TNPLMTVFD 161 (393)
Q Consensus 153 ~nptG~~~~ 161 (393)
-.-+-.++|
T Consensus 88 G~g~~rlL~ 96 (331)
T 4e5s_A 88 GYNSNGLLK 96 (331)
T ss_dssp CSCGGGGGG
T ss_pred cccHHHHHh
Confidence 555555554
No 295
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=34.54 E-value=46 Score=28.58 Aligned_cols=73 Identities=16% Similarity=0.138 Sum_probs=41.8
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++.+..-. ......+..+ +.....++.|.+++.+.++ .+..
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGD----AADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVD 105 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHH----HHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888888777 44 4567788888877653322 2233333333 4455556667776666553 1456
Q ss_pred EEEEecC
Q psy12791 146 MVWIENP 152 (393)
Q Consensus 146 ~v~l~~p 152 (393)
+++-+..
T Consensus 106 ~lvnnAg 112 (277)
T 3gvc_A 106 KLVANAG 112 (277)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6655433
No 296
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=34.44 E-value=52 Score=27.86 Aligned_cols=71 Identities=13% Similarity=0.116 Sum_probs=43.1
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcC------CCCcEE
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIK------PNTKMV 147 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~------~~~~~v 147 (393)
..+++|.|+..| .. ...+++.|-+|++....-.. ....++..++..+..++.|.+++.+.++ .+..++
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 103 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHA----SVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAV 103 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCH----HHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHH----HHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 468888888888 44 45677778777765543332 2222334467777777777776666553 245666
Q ss_pred EEe
Q psy12791 148 WIE 150 (393)
Q Consensus 148 ~l~ 150 (393)
+-+
T Consensus 104 v~n 106 (260)
T 3gem_A 104 VHN 106 (260)
T ss_dssp EEC
T ss_pred EEC
Confidence 544
No 297
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=34.44 E-value=1.8e+02 Score=23.43 Aligned_cols=119 Identities=13% Similarity=0.029 Sum_probs=52.8
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCCCCHHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDLRKIEN 135 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~~d~~~ 135 (393)
+...++-..+++.......+-+++|+-.. ..+...+.++.+|+..+..-. ........++..|. ++..+.. |..+
T Consensus 55 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~g~~~~i~~~~~-d~~~ 132 (229)
T 2avd_A 55 CEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQ-PPELGRPLWRQAEAEHKIDLRLK-PALE 132 (229)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSH-HHHHHHHHHHHTTCTTTEEEEES-CHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHCCCCCeEEEEEc-CHHH
Confidence 33333444445444444566667765443 333333443556766655432 11122333333343 2333322 4333
Q ss_pred HHhhcC-----CCCcEEEEecCCCCcccccCHHHHHHHHHhC--CCcEEEEeCccCc
Q psy12791 136 LIKYIK-----PNTKMVWIENPTNPLMTVFDVKAISAVVKQH--PDILLVLDNTFLT 185 (393)
Q Consensus 136 l~~~l~-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~--~~~~livDea~~~ 185 (393)
....+. ....+|++..+ .....++.+.+.+. ||..+++|++...
T Consensus 133 ~~~~~~~~~~~~~~D~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 183 (229)
T 2avd_A 133 TLDELLAAGEAGTFDVAVVDAD------KENCSAYYERCLQLLRPGGILAVLRVLWR 183 (229)
T ss_dssp HHHHHHHTTCTTCEEEEEECSC------STTHHHHHHHHHHHEEEEEEEEEECCSGG
T ss_pred HHHHHHhcCCCCCccEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEECCCcC
Confidence 322221 24567776443 11223333333321 4677788876543
No 298
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=34.20 E-value=55 Score=27.91 Aligned_cols=73 Identities=11% Similarity=0.054 Sum_probs=42.0
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccC--CcEEEeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKI--GLEVDFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~--g~~v~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|.+|++....-.. ........ .+..+..++.|.+.+.+.+. .+..
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 81 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEA----LDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVD 81 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGG----GHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCC
Confidence 467888888887 44 45677888888766544332 22222222 34555556667777666553 1456
Q ss_pred EEEEecC
Q psy12791 146 MVWIENP 152 (393)
Q Consensus 146 ~v~l~~p 152 (393)
+++-+..
T Consensus 82 ~lv~~Ag 88 (281)
T 3m1a_A 82 VLVNNAG 88 (281)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6655443
No 299
>1ywx_A 30S ribosomal protein S24E; GFT MRR16, nesgc, structural genomics, PSI, protein structure initiative; NMR {Methanococcus maripaludis} SCOP: d.12.1.3
Probab=34.20 E-value=29 Score=24.95 Aligned_cols=24 Identities=13% Similarity=0.254 Sum_probs=19.8
Q ss_pred CCchHHHHHHHHHHHhCCC-cEEEe
Q psy12791 57 NNPTRRNLERCIASLEEAK-HGLCY 80 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~-~~i~~ 80 (393)
++|...+++++||+.++++ +.|++
T Consensus 28 ~tpsk~eirekLAk~~~~~~d~Vvv 52 (102)
T 1ywx_A 28 ATPSIKDVKMKLVAVLNANKQVLVV 52 (102)
T ss_dssp CCCCHHHHHHHHHHHHTSCSTTEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEE
Confidence 6788999999999999987 44444
No 300
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=34.16 E-value=51 Score=27.79 Aligned_cols=73 Identities=12% Similarity=0.099 Sum_probs=41.3
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++.+..-. .........+ ...+..++.|.+++.+.++ .+..
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 84 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIE----RARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD 84 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777777 44 4567788888877654322 2233333323 3444555657776666553 1456
Q ss_pred EEEEecC
Q psy12791 146 MVWIENP 152 (393)
Q Consensus 146 ~v~l~~p 152 (393)
+++-+..
T Consensus 85 ~lv~~Ag 91 (259)
T 4e6p_A 85 ILVNNAA 91 (259)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665443
No 301
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=33.79 E-value=77 Score=26.46 Aligned_cols=65 Identities=11% Similarity=0.147 Sum_probs=35.5
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcC-CCccchHHHHHHhcccCCc--EEEeeCCCCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGD-DVYGGTYRYFAQVAPKIGL--EVDFVDLRKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~-~~y~~~~~~~~~~~~~~g~--~v~~~~~~d~~~l~~~l~ 141 (393)
..+++|.|+..| .. ...+++.|-+|++.. ..-.... ......+..+. .+...++.|.+++.+.++
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 83 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRV-KWLEDQKALGFDFYASEGNVGDWDSTKQAFD 83 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHH-HHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHHHhcCCeeEEEecCCCCHHHHHHHHH
Confidence 578888888888 44 456778887776633 2222211 12222233344 444555557666665553
No 302
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=33.59 E-value=64 Score=26.47 Aligned_cols=71 Identities=7% Similarity=0.009 Sum_probs=39.7
Q ss_pred EEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCCCCHHHHHhhcCC---CCcEEEE
Q psy12791 77 GLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDLRKIENLIKYIKP---NTKMVWI 149 (393)
Q Consensus 77 ~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l~~---~~~~v~l 149 (393)
.+++|+|+..| .. ...+++.|.+|++....-. ......+..+ +.....++.|.+++.+.+.. ...+++-
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSES----KLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHH----HHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 36777788777 44 4567778877777643322 2333333333 34455566677777665542 2345544
Q ss_pred ec
Q psy12791 150 EN 151 (393)
Q Consensus 150 ~~ 151 (393)
+.
T Consensus 79 ~A 80 (230)
T 3guy_A 79 SA 80 (230)
T ss_dssp CC
T ss_pred eC
Confidence 43
No 303
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=33.54 E-value=1.3e+02 Score=24.92 Aligned_cols=76 Identities=9% Similarity=0.039 Sum_probs=39.3
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe--eCCCCHHHHHhhcCC------CCc
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF--VDLRKIENLIKYIKP------NTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~--~~~~d~~~l~~~l~~------~~~ 145 (393)
..+++|.|+..| . ++..+++.|-+|++...............++..+.++.. .++.|.+++.+.+.. +..
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 87 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGID 87 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 457787777777 4 445667778777665433111111122222223444444 455577776665541 456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+|+-+.
T Consensus 88 ~vi~~A 93 (258)
T 3afn_B 88 VLINNA 93 (258)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665543
No 304
>2v94_A RPS24, 30S ribosomal protein S24E; ribonucleoprotein; 1.90A {Pyrococcus abyssi} SCOP: d.12.1.3
Probab=33.44 E-value=32 Score=24.97 Aligned_cols=25 Identities=8% Similarity=0.286 Sum_probs=20.2
Q ss_pred CCCchHHHHHHHHHHHhCCC-cEEEe
Q psy12791 56 SNNPTRRNLERCIASLEEAK-HGLCY 80 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~-~~i~~ 80 (393)
-+.|...+++++||+.++++ +.|++
T Consensus 36 ~~tpsk~eirekLA~~~~~~~d~Vvv 61 (107)
T 2v94_A 36 EPTPSRKDVKGKLVAMLDLNPETTVI 61 (107)
T ss_dssp SCCCCHHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCCCEEEE
Confidence 35788999999999999987 55544
No 305
>1xn9_A 30S ribosomal protein S24E; beta+alpha, GFT structural genomics, protein structure initiative, PSI, NESG, MAR11; NMR {Methanosarcina mazei} SCOP: d.12.1.3
Probab=33.42 E-value=31 Score=24.77 Aligned_cols=24 Identities=21% Similarity=0.358 Sum_probs=19.7
Q ss_pred CCchHHHHHHHHHHHhCCC-cEEEe
Q psy12791 57 NNPTRRNLERCIASLEEAK-HGLCY 80 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~-~~i~~ 80 (393)
++|...+++++||+.++++ +.|++
T Consensus 28 ~tpsk~eirekLAk~~~~~~~~Vvv 52 (101)
T 1xn9_A 28 STPSRNDVRNKLAAMLNAPLELLVI 52 (101)
T ss_dssp SCCCHHHHHHHHHHHTTCCTTTEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEE
Confidence 6788999999999999987 44443
No 306
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=33.41 E-value=1.1e+02 Score=26.06 Aligned_cols=76 Identities=9% Similarity=0.092 Sum_probs=39.5
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe--eCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF--VDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~--~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++....-..........++..|.++.. .++.|.+++.+.++ .+..
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 109 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLD 109 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888888887 44 45677788887764322111111112222334544444 45557666655543 1455
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 110 ~lv~~A 115 (283)
T 1g0o_A 110 IVCSNS 115 (283)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 307
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=33.26 E-value=67 Score=27.18 Aligned_cols=77 Identities=8% Similarity=0.090 Sum_probs=39.6
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe--eCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF--VDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~--~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++....-..............+.++.. .++.|.+++.+.++ .+..
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 100 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD 100 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888888888 44 45677888888776443221111111111113444444 44446555554443 2456
Q ss_pred EEEEecC
Q psy12791 146 MVWIENP 152 (393)
Q Consensus 146 ~v~l~~p 152 (393)
+++-+..
T Consensus 101 ~lv~nAg 107 (266)
T 4egf_A 101 VLVNNAG 107 (266)
T ss_dssp EEEEECC
T ss_pred EEEECCC
Confidence 6665443
No 308
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=33.20 E-value=95 Score=27.64 Aligned_cols=69 Identities=16% Similarity=0.071 Sum_probs=45.1
Q ss_pred hcCCCCeEEEcCCCccch------HHHHHHhcccCCcEEEeeCCC-------------CHHHHHhhcC-CCCcEEEEecC
Q psy12791 93 LLSAGDHIISGDDVYGGT------YRYFAQVAPKIGLEVDFVDLR-------------KIENLIKYIK-PNTKMVWIENP 152 (393)
Q Consensus 93 ~~~~gd~vl~~~~~y~~~------~~~~~~~~~~~g~~v~~~~~~-------------d~~~l~~~l~-~~~~~v~l~~p 152 (393)
.+++||+|-+..|+.+.. +......++.+|.+|+.-+.. ..++|.+++. ++.++|+..--
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 368899999999887532 222344567789999876542 2566766665 45788887655
Q ss_pred CCCcccccC
Q psy12791 153 TNPLMTVFD 161 (393)
Q Consensus 153 ~nptG~~~~ 161 (393)
-.-+-.++|
T Consensus 89 G~g~~rlL~ 97 (336)
T 3sr3_A 89 GMNSNSLLP 97 (336)
T ss_dssp CSCGGGGGG
T ss_pred cccHHHHhh
Confidence 555555554
No 309
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=33.16 E-value=1.1e+02 Score=25.83 Aligned_cols=75 Identities=12% Similarity=0.101 Sum_probs=42.6
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--CHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--KIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++....-... ......++..|.++..+..| |.+++.+.++ .+..
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRV-AQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVD 105 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHH-HHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 577888888888 44 456778898888865433211 11222223345556555544 7666666553 1455
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 106 ~lv~nA 111 (271)
T 4ibo_A 106 ILVNNA 111 (271)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665543
No 310
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=33.11 E-value=99 Score=25.97 Aligned_cols=65 Identities=12% Similarity=0.124 Sum_probs=35.5
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEc-CCCccchHHHHHHhcccCCcE--EEeeCCCCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISG-DDVYGGTYRYFAQVAPKIGLE--VDFVDLRKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~-~~~y~~~~~~~~~~~~~~g~~--v~~~~~~d~~~l~~~l~ 141 (393)
..+++|.|+..| .. ...+++.|-+|++. ...-.. ........+..|.+ ....++.|.+++.+.++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 78 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEG-AATAVAEIEKLGRSALAIKADLTNAAEVEAAIS 78 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHH-HHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 467788888888 44 45677888888765 332221 11122222333444 44445557766666553
No 311
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=32.94 E-value=1.1e+02 Score=26.04 Aligned_cols=28 Identities=11% Similarity=0.106 Sum_probs=20.4
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEc
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISG 103 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~ 103 (393)
..+++|.|+..| . +...+++.|-+|++.
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~ 41 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAV 41 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEE
Confidence 467888888888 4 445677888888765
No 312
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=32.84 E-value=1.1e+02 Score=25.91 Aligned_cols=30 Identities=20% Similarity=0.231 Sum_probs=21.0
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDD 105 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~ 105 (393)
..+++|.|+..| .. ...+++.|-+|++.+.
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeC
Confidence 467788888888 44 4567788888876543
No 313
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=32.71 E-value=1.5e+02 Score=24.59 Aligned_cols=65 Identities=8% Similarity=0.069 Sum_probs=36.8
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC--CCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL--RKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~--~d~~~l~~~l~ 141 (393)
..+++|+|+..| .. ...+++.|-+|++.+..-.... .....++..|.++..+.. .|.+++.+.++
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 76 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLA-PLVAEIEAAGGRIVARSLDARNEDEVTAFLN 76 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGH-HHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEECcCCCHHHHHHHHH
Confidence 467788888887 44 4567788888877654332211 122223334556655544 47666665543
No 314
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=32.65 E-value=93 Score=26.46 Aligned_cols=62 Identities=8% Similarity=0.053 Sum_probs=29.9
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEee-CC-CCHHHHHhhcCCCCcEEEEecCCCCccccc
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFV-DL-RKIENLIKYIKPNTKMVWIENPTNPLMTVF 160 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~-~~-~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 160 (393)
|-+++++.-+.. ...+...++.+|+..+.+ .. .+.+.+..........||+.+-...||...
T Consensus 118 dG~IipDLP~eE-~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~GvTG~~~ 181 (252)
T 3tha_A 118 CALIVPELSFEE-SDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFIYLLASIGITGTKS 181 (252)
T ss_dssp EEEECTTCCGGG-CHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCEEEECCSCSSSCSH
T ss_pred CEEEeCCCCHHH-HHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeEEEEecCCCCCccc
Confidence 456666544332 224555566666665442 22 234444443333334555555445566544
No 315
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=32.64 E-value=73 Score=25.83 Aligned_cols=43 Identities=12% Similarity=0.128 Sum_probs=34.5
Q ss_pred CCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEE
Q psy12791 131 RKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVL 179 (393)
Q Consensus 131 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~liv 179 (393)
.+.+++++++..+...+++- +|.+..++++.+.++++ +-.+++
T Consensus 17 r~~~~l~~al~s~~~~ifll-----~g~i~~l~~~v~~lk~~-~K~v~V 59 (192)
T 3kts_A 17 HNQKDMEKILELDLTYMVML-----ETHVAQLKALVKYAQAG-GKKVLL 59 (192)
T ss_dssp SSSHHHHHHTTSSCCEEEEC-----SEETTTHHHHHHHHHHT-TCEEEE
T ss_pred cCHHHHHHHHcCCCCEEEEe-----cCcHHHHHHHHHHHHHc-CCeEEE
Confidence 47899999998888888873 36788999999999999 555444
No 316
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=32.51 E-value=49 Score=28.50 Aligned_cols=70 Identities=10% Similarity=0.137 Sum_probs=41.1
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcCC--CCcEEEE
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIKP--NTKMVWI 149 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~~--~~~~v~l 149 (393)
..+++|.|+..| . +...+++.|-+|++..-.-. ......+..+.++..+ ++.|.+++.+.++. +..+++.
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~ 92 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTR----KGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN 92 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 467788888777 4 44567788888877543322 2344444445555544 44577777766643 3444443
No 317
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=32.35 E-value=1.8e+02 Score=24.48 Aligned_cols=61 Identities=21% Similarity=0.166 Sum_probs=35.5
Q ss_pred cEEEeccHHHHH-HHH-HHhcCCCCeEEEcCCCccchHHHHHHhccc-CCcEEEeeCCCCHHHHHhhc
Q psy12791 76 HGLCYSSGLGAV-TAV-THLLSAGDHIISGDDVYGGTYRYFAQVAPK-IGLEVDFVDLRKIENLIKYI 140 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~-~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~-~g~~v~~~~~~d~~~l~~~l 140 (393)
..+++|.|+..| .++ ..+.+.|-+|++.+..-. ......+. .++.....++.|.+++++.+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v 66 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEK----RSADFAKERPNLFYFHGDVADPLTLKKFV 66 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHTTCTTEEEEECCTTSHHHHHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHhcCCEEEEEecCCCHHHHHHHH
Confidence 357888888888 544 567888988887654322 23333332 22333444555666665554
No 318
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=32.35 E-value=49 Score=28.26 Aligned_cols=61 Identities=20% Similarity=0.219 Sum_probs=35.3
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCCCCHHHHHhhc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDLRKIENLIKYI 140 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l 140 (393)
..+++|.|+..| .. ...+++.|-+|++.+-.-. ......+..+ +.++..++.|.+++.+.+
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~ 95 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAE----KGKALADELGNRAEFVSTNVTSEDSVLAAI 95 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHCTTEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChH----HHHHHHHHhCCceEEEEcCCCCHHHHHHHH
Confidence 467788888888 44 4567788888877644322 2333333334 344455555766665544
No 319
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=32.30 E-value=83 Score=26.06 Aligned_cols=35 Identities=20% Similarity=0.108 Sum_probs=28.1
Q ss_pred CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEE
Q psy12791 143 NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVL 179 (393)
Q Consensus 143 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~liv 179 (393)
.+.+|+++-. |..|.....+++.+++++| +..++.
T Consensus 167 ~Pa~vicEi~-~~dG~mar~~~l~~fA~~h-~l~~it 201 (217)
T 1g57_A 167 KPAGVLCELT-NDDGTMARAPECIEFANKH-NMALVT 201 (217)
T ss_dssp CSCEEEEEBB-CTTSSBCCHHHHHHHHHHT-TCEEEE
T ss_pred CceEEEEEEe-CCCCCccCHHHHHHHHHHc-CCCEEE
Confidence 4677776644 6779999999999999999 887663
No 320
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=32.25 E-value=1.7e+02 Score=25.07 Aligned_cols=76 Identities=9% Similarity=0.051 Sum_probs=41.3
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCC---cEEEeeCCCCHHHHHhhcC------CCC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG---LEVDFVDLRKIENLIKYIK------PNT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g---~~v~~~~~~d~~~l~~~l~------~~~ 144 (393)
..+++|.|+..| .. ...+++.|-+|++....-.... .....++..+ +..+..++.|.+++.+.++ .+.
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 120 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELS-SVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGAL 120 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH-HHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 478888888888 44 4567788888877654433221 1222223333 3344455557766655543 145
Q ss_pred cEEEEecC
Q psy12791 145 KMVWIENP 152 (393)
Q Consensus 145 ~~v~l~~p 152 (393)
.+++-+..
T Consensus 121 D~lvnnAg 128 (293)
T 3rih_A 121 DVVCANAG 128 (293)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 56554433
No 321
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=32.15 E-value=1.5e+02 Score=26.36 Aligned_cols=94 Identities=9% Similarity=0.096 Sum_probs=50.0
Q ss_pred EEEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC-CCCHHHHHhhcCCCCcEEEEecCC
Q psy12791 77 GLCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD-LRKIENLIKYIKPNTKMVWIENPT 153 (393)
Q Consensus 77 ~i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~-~~d~~~l~~~l~~~~~~v~l~~p~ 153 (393)
.+++|.++.-+ .++..+++.|.+|++..-.-... .........+++++..+ +.|.+.+.+++. +...|+.+...
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~-~~d~Vi~~a~~ 83 (352)
T 1xgk_A 7 TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL--IAEELQAIPNVTLFQGPLLNNVPLMDTLFE-GAHLAFINTTS 83 (352)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSH--HHHHHHTSTTEEEEESCCTTCHHHHHHHHT-TCSEEEECCCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChh--hHHHHhhcCCcEEEECCccCCHHHHHHHHh-cCCEEEEcCCC
Confidence 46666555555 34445666676665532211110 01222222367788888 888888888875 46666654332
Q ss_pred CCcccccCHHHHHHHHHhCCC
Q psy12791 154 NPLMTVFDVKAISAVVKQHPD 174 (393)
Q Consensus 154 nptG~~~~~~~l~~l~~~~~~ 174 (393)
........-..+.+.|++. +
T Consensus 84 ~~~~~~~~~~~l~~aa~~~-g 103 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRA-G 103 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHH-S
T ss_pred CCcHHHHHHHHHHHHHHHc-C
Confidence 2111111136677777776 5
No 322
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=31.98 E-value=1.3e+02 Score=25.17 Aligned_cols=76 Identities=12% Similarity=0.083 Sum_probs=42.1
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcCC------CCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIKP------NTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~~------~~~ 145 (393)
..+++|+|+..| .. ...+++.|-+|++....-... ......+...|.++..+ ++.|.+++.+.+.. +..
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 108 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKL-RAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCD 108 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 578888888887 44 456778888887765433211 11222223345555544 44577666665432 456
Q ss_pred EEEEecC
Q psy12791 146 MVWIENP 152 (393)
Q Consensus 146 ~v~l~~p 152 (393)
+++.+..
T Consensus 109 ~lv~~Ag 115 (262)
T 3rkr_A 109 VLVNNAG 115 (262)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665433
No 323
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=31.68 E-value=1.3e+02 Score=24.91 Aligned_cols=72 Identities=18% Similarity=0.116 Sum_probs=41.3
Q ss_pred EEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcc-cCCcEEEeeCCCCHHHHHhhcC------CCCcEE
Q psy12791 77 GLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAP-KIGLEVDFVDLRKIENLIKYIK------PNTKMV 147 (393)
Q Consensus 77 ~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~-~~g~~v~~~~~~d~~~l~~~l~------~~~~~v 147 (393)
.+++|.|+..| .. ...+++.|.+|++.+..-. ......+ ..+......++.|.+++.+.++ .+..++
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 79 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEK----RSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL 79 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57788888887 44 4567788888877543322 2233222 2234455566667776666554 245666
Q ss_pred EEecC
Q psy12791 148 WIENP 152 (393)
Q Consensus 148 ~l~~p 152 (393)
+-+..
T Consensus 80 v~nAg 84 (247)
T 3dii_A 80 VNNAC 84 (247)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 55443
No 324
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=31.46 E-value=2.5e+02 Score=24.07 Aligned_cols=102 Identities=9% Similarity=0.079 Sum_probs=53.9
Q ss_pred HhCCCcEEE-eccHHHHHHHHHHhcCCC--CeEEEc--CCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCc
Q psy12791 71 LEEAKHGLC-YSSGLGAVTAVTHLLSAG--DHIISG--DDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTK 145 (393)
Q Consensus 71 ~~~~~~~i~-~~~G~~al~~~~~~~~~g--d~vl~~--~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~ 145 (393)
++...+.|+ .+++.+.+..+....+.| -+|++. .|.+.+ ...... +...|+++..+.-.-... .+ ++..
T Consensus 106 ~I~~g~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~etrP~~qG-~~~a~~-L~~~gI~vtli~dsa~~~---~m-~~vd 179 (276)
T 1vb5_A 106 LIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTESSPDYEG-LHLARE-LEFSGIEFEVITDAQMGL---FC-REAS 179 (276)
T ss_dssp HCCTTEEEECCSCCHHHHHHHHHHHHTTCCEEEEEECCTTTTHH-HHHHHH-HHHTTCCEEEECGGGHHH---HH-TTCS
T ss_pred HccCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEEeCCCcchhh-HHHHHH-HHHCCCCEEEEcHHHHHH---HH-ccCC
Confidence 344335666 455555554444333333 356663 466654 222333 344799999887322232 23 2566
Q ss_pred EEEE-ecCCCCcccccC---HHHHHHHHHhCCCcEEEE
Q psy12791 146 MVWI-ENPTNPLMTVFD---VKAISAVVKQHPDILLVL 179 (393)
Q Consensus 146 ~v~l-~~p~nptG~~~~---~~~l~~l~~~~~~~~liv 179 (393)
.|++ ..--...|.+.. -..+...|+.+ ++++++
T Consensus 180 ~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~-~vp~~V 216 (276)
T 1vb5_A 180 IAIVGADMITKDGYVVNKAGTYLLALACHEN-AIPFYV 216 (276)
T ss_dssp EEEECCSEECTTSCEEEETTHHHHHHHHHHT-TCCEEE
T ss_pred EEEEcccEEecCCCEeechhHHHHHHHHHHc-CCCEEE
Confidence 7776 222233354443 56678888888 765555
No 325
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=31.36 E-value=78 Score=25.97 Aligned_cols=36 Identities=8% Similarity=0.069 Sum_probs=28.8
Q ss_pred CCcEEEEecC-CCCcccccCHHHHHHHHHhCCCcEEEE
Q psy12791 143 NTKMVWIENP-TNPLMTVFDVKAISAVVKQHPDILLVL 179 (393)
Q Consensus 143 ~~~~v~l~~p-~nptG~~~~~~~l~~l~~~~~~~~liv 179 (393)
.+..|+++-. .|..|.....+++.+++++| |..++.
T Consensus 158 ~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h-~l~~it 194 (206)
T 3mio_A 158 QPAGAICEIVSQKDEGSMAHTDELRVFADEH-GLALIT 194 (206)
T ss_dssp CSBEEEEEBBCSSSTTSBCCHHHHHHHHHHH-TCEEEE
T ss_pred CceEEEEEEeeeCCCCCcCCHHHHHHHHHHc-CCcEEE
Confidence 4677766652 56789999999999999999 987763
No 326
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=31.26 E-value=62 Score=26.84 Aligned_cols=73 Identities=14% Similarity=0.064 Sum_probs=40.7
Q ss_pred EEEeccHHHHH-HHH-HHhcCCCCeEEEcCCCccchHHHHHHhcccC--CcEEEeeCCCCHHHHHhhcC------CCCcE
Q psy12791 77 GLCYSSGLGAV-TAV-THLLSAGDHIISGDDVYGGTYRYFAQVAPKI--GLEVDFVDLRKIENLIKYIK------PNTKM 146 (393)
Q Consensus 77 ~i~~~~G~~al-~~~-~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~--g~~v~~~~~~d~~~l~~~l~------~~~~~ 146 (393)
.+++|.|+..| ..+ ..+++.|.+|++..-.-. ......+.. ++.....++.|.+++.+.++ .+..+
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQ----RLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 57778888887 444 567778888877644322 122222221 34455556657766665543 24566
Q ss_pred EEEecCC
Q psy12791 147 VWIENPT 153 (393)
Q Consensus 147 v~l~~p~ 153 (393)
++-+...
T Consensus 81 lvnnAg~ 87 (235)
T 3l6e_A 81 VLHCAGT 87 (235)
T ss_dssp EEEECCC
T ss_pred EEECCCC
Confidence 6654443
No 327
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.22 E-value=1.2e+02 Score=25.51 Aligned_cols=76 Identities=9% Similarity=0.048 Sum_probs=40.6
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCC---cEEEeeCCCCHHHHHhhcC------CCC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG---LEVDFVDLRKIENLIKYIK------PNT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g---~~v~~~~~~d~~~l~~~l~------~~~ 144 (393)
..+++|.|+..| .. ...+++.|-+|++....-.... ......+..+ +..+..++.|.+++++.++ .+.
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 89 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADID-ACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGI 89 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 467888888888 44 4567788888877643322111 1111122222 3444445557766666543 145
Q ss_pred cEEEEecC
Q psy12791 145 KMVWIENP 152 (393)
Q Consensus 145 ~~v~l~~p 152 (393)
.+++-+..
T Consensus 90 d~lvnnAg 97 (262)
T 3pk0_A 90 DVVCANAG 97 (262)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 66665433
No 328
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=31.22 E-value=1.8e+02 Score=24.17 Aligned_cols=73 Identities=10% Similarity=0.058 Sum_probs=40.2
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|.+|++....-.. .....+...|.++..+ ++.|.+++.+.++ .+..
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA---PALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH---HHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 357788887777 44 45677788888765432221 1222223335455544 4447777766554 1456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 82 ~lv~~A 87 (255)
T 2q2v_A 82 ILVNNA 87 (255)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 329
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=31.14 E-value=1.3e+02 Score=26.29 Aligned_cols=77 Identities=12% Similarity=0.071 Sum_probs=40.9
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCC-ccch---HHHHHHhcccCC--cEEEeeCCCCHHHHHhhcC------
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDV-YGGT---YRYFAQVAPKIG--LEVDFVDLRKIENLIKYIK------ 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~-y~~~---~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l~------ 141 (393)
..+++|+|+..| . +...+++.|.+|++..-. .... .......++..+ +.++..++.|.+++.+.++
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 85 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED 85 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 467888888887 4 445677889888764221 1111 111222223334 4445555557776666554
Q ss_pred CCCcEEEEecC
Q psy12791 142 PNTKMVWIENP 152 (393)
Q Consensus 142 ~~~~~v~l~~p 152 (393)
.+..+++-+..
T Consensus 86 g~iD~lVnnAG 96 (324)
T 3u9l_A 86 GRIDVLIHNAG 96 (324)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 24566654433
No 330
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=31.12 E-value=99 Score=25.93 Aligned_cols=76 Identities=8% Similarity=0.029 Sum_probs=41.5
Q ss_pred cEEEeccHH--HHH-H-HHHHhcCCCCeEEEcCCCccch-HHHHHHhcccCCcEEEeeCCC--CHHHHHhhcC------C
Q psy12791 76 HGLCYSSGL--GAV-T-AVTHLLSAGDHIISGDDVYGGT-YRYFAQVAPKIGLEVDFVDLR--KIENLIKYIK------P 142 (393)
Q Consensus 76 ~~i~~~~G~--~al-~-~~~~~~~~gd~vl~~~~~y~~~-~~~~~~~~~~~g~~v~~~~~~--d~~~l~~~l~------~ 142 (393)
..+++|.|+ ..| . +...+++.|..|++..-.-... ........+..+.++..+..| |.+++++.++ .
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFG 100 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTS
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence 467777776 567 4 4456777888887764333221 112333333446666666554 6666555443 2
Q ss_pred CCcEEEEec
Q psy12791 143 NTKMVWIEN 151 (393)
Q Consensus 143 ~~~~v~l~~ 151 (393)
+..+++-+.
T Consensus 101 ~id~li~nA 109 (267)
T 3gdg_A 101 QIDAFIANA 109 (267)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 456665543
No 331
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=30.98 E-value=1.5e+02 Score=25.05 Aligned_cols=77 Identities=12% Similarity=0.113 Sum_probs=42.0
Q ss_pred cEEEeccHHHHH-HHH-HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TAV-THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~-~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|+|+..| ..+ ..+++.|-+|++..-.-.. .......++..|.++..+ ++.|.+++.+.++ .+..
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 83 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQAR-IEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRID 83 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888888888 444 5677888888776433221 111222233345555554 4447666665543 2456
Q ss_pred EEEEecCC
Q psy12791 146 MVWIENPT 153 (393)
Q Consensus 146 ~v~l~~p~ 153 (393)
+++-+...
T Consensus 84 ~lVnnAG~ 91 (264)
T 3tfo_A 84 VLVNNAGV 91 (264)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 66554433
No 332
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=30.95 E-value=1.5e+02 Score=25.30 Aligned_cols=23 Identities=17% Similarity=-0.007 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHHhCCCcEEEecc
Q psy12791 60 TRRNLERCIASLEEAKHGLCYSS 82 (393)
Q Consensus 60 ~~~~lr~~la~~~~~~~~i~~~~ 82 (393)
...+|+++|.+.+|..+++++.+
T Consensus 12 ~~~~Le~~L~~~fgL~~v~Vvp~ 34 (266)
T 3efb_A 12 ENLWLEQQLKQKFGLKDVVVVSG 34 (266)
T ss_dssp CCHHHHHHHHHHHTCSEEEEECC
T ss_pred cHHHHHHHHHHHhCCCEEEEEcC
Confidence 45578888888888888777754
No 333
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=30.94 E-value=2.1e+02 Score=24.15 Aligned_cols=74 Identities=14% Similarity=0.134 Sum_probs=40.0
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC--CCCHHHHHhhcC-----CCCcE
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD--LRKIENLIKYIK-----PNTKM 146 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~--~~d~~~l~~~l~-----~~~~~ 146 (393)
..+++|.|+..| .. ...+++.|-+|++.... .. ...........+.++..+. +.|.+++.+... .+..+
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~ 109 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DG-VKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDV 109 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-TH-HHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcE
Confidence 467788888888 44 45677888888766522 21 1122222334455555554 446666554422 24556
Q ss_pred EEEec
Q psy12791 147 VWIEN 151 (393)
Q Consensus 147 v~l~~ 151 (393)
++-+.
T Consensus 110 lv~nA 114 (273)
T 3uf0_A 110 LVNNA 114 (273)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 55443
No 334
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=30.93 E-value=1.3e+02 Score=25.14 Aligned_cols=76 Identities=13% Similarity=0.090 Sum_probs=39.6
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccC-CcEEEee--CCCCHHHHHhhcCC------CC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKI-GLEVDFV--DLRKIENLIKYIKP------NT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~-g~~v~~~--~~~d~~~l~~~l~~------~~ 144 (393)
..+++|.|+..| .. ...+++.|.+|++....-..........+... |.++..+ ++.|.+++.+.++. +.
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 84 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI 84 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 357788877777 44 45677788888776543221011111111111 4444444 55577766665542 45
Q ss_pred cEEEEec
Q psy12791 145 KMVWIEN 151 (393)
Q Consensus 145 ~~v~l~~ 151 (393)
.+++-+.
T Consensus 85 D~lv~~A 91 (260)
T 1x1t_A 85 DILVNNA 91 (260)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 6665443
No 335
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=30.18 E-value=1.4e+02 Score=24.80 Aligned_cols=75 Identities=8% Similarity=0.069 Sum_probs=39.2
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCC-CccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC------CCC
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDD-VYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK------PNT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~-~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~------~~~ 144 (393)
..+++|.|+..| . +...+++.|-+|++... .-. ........++..+.++..+ ++.|.+++.+.+. .+.
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKED-EANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKL 86 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChH-HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 467788777777 4 44567777877776543 211 1111112222334454444 5557666665553 145
Q ss_pred cEEEEec
Q psy12791 145 KMVWIEN 151 (393)
Q Consensus 145 ~~v~l~~ 151 (393)
.+++.+.
T Consensus 87 d~li~~A 93 (261)
T 1gee_A 87 DVMINNA 93 (261)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 6666543
No 336
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=30.00 E-value=1.3e+02 Score=26.25 Aligned_cols=77 Identities=12% Similarity=0.132 Sum_probs=41.2
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCC-------c----cchHHHHHHhcccCCcEEEee--CCCCHHHHHhhc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDV-------Y----GGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYI 140 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~-------y----~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l 140 (393)
..+++|.|+..| .. ...+++.|-.|++.+.. + ..........++..|.++..+ ++.|.+++.+.+
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 126 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVV 126 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 478888888888 44 45677888888765322 1 111111112223345555544 444766666655
Q ss_pred C------CCCcEEEEecC
Q psy12791 141 K------PNTKMVWIENP 152 (393)
Q Consensus 141 ~------~~~~~v~l~~p 152 (393)
+ .+..+++-+..
T Consensus 127 ~~~~~~~g~iD~lVnnAg 144 (317)
T 3oec_A 127 DEALAEFGHIDILVSNVG 144 (317)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 3 24566655433
No 337
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=29.66 E-value=97 Score=26.01 Aligned_cols=77 Identities=13% Similarity=0.040 Sum_probs=39.3
Q ss_pred cEEEeccHH-HHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccC--CcEEEeeCCCCHHHHHhhcC------CCC
Q psy12791 76 HGLCYSSGL-GAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKI--GLEVDFVDLRKIENLIKYIK------PNT 144 (393)
Q Consensus 76 ~~i~~~~G~-~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~--g~~v~~~~~~d~~~l~~~l~------~~~ 144 (393)
..+++|.|+ ..| .+...+++.|-+|++....-.............. .+.+...++.|.+++.+.++ .+.
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 102 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL 102 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence 467777775 466 4445677788888775433221111112221222 23444555557766666553 145
Q ss_pred cEEEEecC
Q psy12791 145 KMVWIENP 152 (393)
Q Consensus 145 ~~v~l~~p 152 (393)
.+++.+..
T Consensus 103 d~li~~Ag 110 (266)
T 3o38_A 103 DVLVNNAG 110 (266)
T ss_dssp CEEEECCC
T ss_pred cEEEECCC
Confidence 66655433
No 338
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=29.39 E-value=78 Score=25.50 Aligned_cols=92 Identities=12% Similarity=0.137 Sum_probs=44.9
Q ss_pred HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCH
Q psy12791 84 LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDV 162 (393)
Q Consensus 84 ~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 162 (393)
++++ ..+..+...|.+|++..|.-...+ .-..+....|.++...+..+.+++.+.+..+..+|++.-.+.-+-. -+
T Consensus 22 TT~ll~~a~r~~~~g~kV~v~k~~~d~r~-~~~~i~s~~g~~~~a~~~~~~~~i~~~~~~~~dvViIDEaqfl~~~--~v 98 (191)
T 1xx6_A 22 SEELIRRIRRAKIAKQKIQVFKPEIDNRY-SKEDVVSHMGEKEQAVAIKNSREILKYFEEDTEVIAIDEVQFFDDE--IV 98 (191)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEC--------CEEECTTSCEEECEEESSSTHHHHHCCTTCSEEEECSGGGSCTH--HH
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccCccc-hHHHHHhhcCCceeeEeeCCHHHHHHHHhccCCEEEEECCCCCCHH--HH
Confidence 3454 445555566777777655443211 1123345556655444444445666555545678888654431100 03
Q ss_pred HHHHHHHHhCCCcEEEEe
Q psy12791 163 KAISAVVKQHPDILLVLD 180 (393)
Q Consensus 163 ~~l~~l~~~~~~~~livD 180 (393)
+.+..++. . ++.+|+=
T Consensus 99 ~~l~~l~~-~-~~~Vi~~ 114 (191)
T 1xx6_A 99 EIVNKIAE-S-GRRVICA 114 (191)
T ss_dssp HHHHHHHH-T-TCEEEEE
T ss_pred HHHHHHHh-C-CCEEEEE
Confidence 44444443 4 6677763
No 339
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=29.37 E-value=1.2e+02 Score=24.99 Aligned_cols=75 Identities=9% Similarity=0.153 Sum_probs=40.6
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe--eCCCCHHHHHhhcCC------CCc
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF--VDLRKIENLIKYIKP------NTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~--~~~~d~~~l~~~l~~------~~~ 145 (393)
..+++|.|+..| . +...+++.|-+|++....-.. .......++..+.++.. .++.|.+++.+.++. +..
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQAS-AEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAID 84 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788888887 4 445677788888765443221 11222223334544444 455576666554431 355
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
.++.+.
T Consensus 85 ~li~~A 90 (247)
T 3lyl_A 85 ILVNNA 90 (247)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665543
No 340
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=29.32 E-value=48 Score=28.47 Aligned_cols=76 Identities=12% Similarity=0.038 Sum_probs=38.7
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++....-..........+...|.++..+ ++.|.+++.+.++ .+..
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 109 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRID 109 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788888888 44 456778888887653211111111222223345455444 4446555444443 1455
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 110 ~lvnnA 115 (280)
T 4da9_A 110 CLVNNA 115 (280)
T ss_dssp EEEEEC
T ss_pred EEEECC
Confidence 555443
No 341
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=29.27 E-value=2.4e+02 Score=24.96 Aligned_cols=76 Identities=11% Similarity=0.073 Sum_probs=42.0
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccc------hHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC----
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGG------TYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK---- 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~------~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~---- 141 (393)
..+++|.|+..| .. ...+++.|-+|++....-.. .........+..|.++..+ ++.|.+++.+.++
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 125 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK 125 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 467788888888 44 45677888877765432211 1111222334456666655 4447766666553
Q ss_pred --CCCcEEEEec
Q psy12791 142 --PNTKMVWIEN 151 (393)
Q Consensus 142 --~~~~~v~l~~ 151 (393)
.+..+++-+.
T Consensus 126 ~~g~iDilVnnA 137 (346)
T 3kvo_A 126 KFGGIDILVNNA 137 (346)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 2456665543
No 342
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=29.21 E-value=1.6e+02 Score=24.63 Aligned_cols=75 Identities=11% Similarity=0.135 Sum_probs=40.9
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++.+..-.. .......++..+.++..+ ++.|.+++.+.++ .+..
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 85 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEK-LEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRID 85 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888888888 44 45677888888775433221 111222233445455444 4557666665553 1455
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 86 ~lv~nA 91 (257)
T 3imf_A 86 ILINNA 91 (257)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 343
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=29.01 E-value=92 Score=29.47 Aligned_cols=66 Identities=15% Similarity=0.221 Sum_probs=36.8
Q ss_pred cEEEeccHHHHH-HHH-HHhcCCCC-eEEEcCCC-c-cchHHHHHHhcccCCcEEEeeCCC--CHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-TAV-THLLSAGD-HIISGDDV-Y-GGTYRYFAQVAPKIGLEVDFVDLR--KIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~-~~~~~~gd-~vl~~~~~-y-~~~~~~~~~~~~~~g~~v~~~~~~--d~~~l~~~l~ 141 (393)
..+++|.|+..| ..+ ..+.+.|- +|++..-. - ..........++..|.++..+..| |.+++.+.+.
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~ 312 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLA 312 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 467888888887 444 45667775 55543221 1 111112333345567777766554 7777666553
No 344
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=28.99 E-value=1.7e+02 Score=25.68 Aligned_cols=77 Identities=14% Similarity=0.113 Sum_probs=40.0
Q ss_pred cEEEeccHHHHHHHHHHhcCCCC-eEEEcCCC---ccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEec
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGD-HIISGDDV---YGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIEN 151 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd-~vl~~~~~---y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~ 151 (393)
..++++.|..+-.++..+...|- +|.+.+.+ ...............+.++..++.++.+++.+.+. +..+|+-+.
T Consensus 156 ~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~-~aDiIINaT 234 (315)
T 3tnl_A 156 KMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA-ESVIFTNAT 234 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-TCSEEEECS
T ss_pred EEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc-CCCEEEECc
Confidence 47777777444233333444553 66665544 32111111122223456666667777777766554 356777666
Q ss_pred CC
Q psy12791 152 PT 153 (393)
Q Consensus 152 p~ 153 (393)
|-
T Consensus 235 p~ 236 (315)
T 3tnl_A 235 GV 236 (315)
T ss_dssp ST
T ss_pred cC
Confidence 64
No 345
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=28.86 E-value=1.3e+02 Score=25.14 Aligned_cols=72 Identities=15% Similarity=0.087 Sum_probs=39.0
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEE--EeeCCCCHHHHHhhcCC------CCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEV--DFVDLRKIENLIKYIKP------NTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v--~~~~~~d~~~l~~~l~~------~~~ 145 (393)
..+++|.|+..| .. ...+++.|.+|++.+..-. ......+..+.++ +..++.|.+++++.++. +..
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 82 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEA----AGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN 82 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHH----HHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788887777 44 4567778888877654322 1222222223334 44455577666655432 345
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 83 ~lv~~A 88 (253)
T 1hxh_A 83 VLVNNA 88 (253)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 555443
No 346
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=28.78 E-value=2.3e+02 Score=22.75 Aligned_cols=119 Identities=13% Similarity=0.123 Sum_probs=57.3
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCCCCHHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDLRKIEN 135 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~~d~~~ 135 (393)
+....+-..++........+=+++|+-.. ..+...+.++.+|+..+..-. ........++..|. .+..+.. |..+
T Consensus 44 ~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~~-d~~~ 121 (223)
T 3duw_A 44 PTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEK-HADIARSNIERANLNDRVEVRTG-LALD 121 (223)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHH-HHHHHHHHHHHTTCTTTEEEEES-CHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEc-CHHH
Confidence 44444445555554544566667776554 334444444557766654432 11122333333443 2333332 4333
Q ss_pred HHhhcC----CCCcEEEEecCCCCcccccCHHHHHHHHHhC--CCcEEEEeCccCc
Q psy12791 136 LIKYIK----PNTKMVWIENPTNPLMTVFDVKAISAVVKQH--PDILLVLDNTFLT 185 (393)
Q Consensus 136 l~~~l~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~--~~~~livDea~~~ 185 (393)
....+. ....+|++..+. .....+.+.+.+. ||.++++|+....
T Consensus 122 ~~~~~~~~~~~~fD~v~~d~~~------~~~~~~l~~~~~~L~pgG~lv~~~~~~~ 171 (223)
T 3duw_A 122 SLQQIENEKYEPFDFIFIDADK------QNNPAYFEWALKLSRPGTVIIGDNVVRE 171 (223)
T ss_dssp HHHHHHHTTCCCCSEEEECSCG------GGHHHHHHHHHHTCCTTCEEEEESCSGG
T ss_pred HHHHHHhcCCCCcCEEEEcCCc------HHHHHHHHHHHHhcCCCcEEEEeCCCcC
Confidence 222221 346788875441 1233444444432 5778888887764
No 347
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=28.76 E-value=1e+02 Score=25.79 Aligned_cols=66 Identities=9% Similarity=0.039 Sum_probs=34.5
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEE--EeeCCCCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEV--DFVDLRKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v--~~~~~~d~~~l~~~l~ 141 (393)
..+++|.|+..| . ++..+++.|-+|++....-..........++..|.++ +..++.|.+++.+.+.
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 91 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFD 91 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence 467888887777 4 4456777787777643311111111112222234444 4445557777666554
No 348
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=28.73 E-value=1e+02 Score=23.76 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=36.6
Q ss_pred CHHHHHhhcCC-CCcEEEEecCCCCcccccC-H---HHHH-HHHHhCCCc-EEEEeCccCc
Q psy12791 132 KIENLIKYIKP-NTKMVWIENPTNPLMTVFD-V---KAIS-AVVKQHPDI-LLVLDNTFLT 185 (393)
Q Consensus 132 d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~-~---~~l~-~l~~~~~~~-~livDea~~~ 185 (393)
+.+.+.+.+.+ ++..|++..|-|..|..-+ . +.++ .+++++ ++ +..+||.|+.
T Consensus 43 ~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~-~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 43 GLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTY-NVPVVLWDERLTT 102 (150)
T ss_dssp CHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHH-CSCEEEECCSSCH
T ss_pred HHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhh-CCCEEEecCCCCH
Confidence 57778888776 4889999999777777654 2 2333 344445 44 6788999875
No 349
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=28.68 E-value=1.5e+02 Score=25.27 Aligned_cols=78 Identities=10% Similarity=0.047 Sum_probs=41.7
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccc------hHHHHHHhcccCCcEEEeeC--CCCHHHHHhhcC----
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGG------TYRYFAQVAPKIGLEVDFVD--LRKIENLIKYIK---- 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~------~~~~~~~~~~~~g~~v~~~~--~~d~~~l~~~l~---- 141 (393)
..+++|.|+..| .. ...+++.|-+|++....-.. .........+..|.++..+. +.|.+++.+.++
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 89 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVE 89 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 467788888887 44 45677888888765432210 01111222233455665554 447666665543
Q ss_pred --CCCcEEEEecCC
Q psy12791 142 --PNTKMVWIENPT 153 (393)
Q Consensus 142 --~~~~~v~l~~p~ 153 (393)
.+..+++-+...
T Consensus 90 ~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 90 QFGGIDICVNNASA 103 (285)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 245666654433
No 350
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=28.63 E-value=1.3e+02 Score=24.69 Aligned_cols=74 Identities=11% Similarity=0.054 Sum_probs=38.2
Q ss_pred EEEeccHHHHH-H-HHHHhcCCCCeEEEc-CCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcCC------CCc
Q psy12791 77 GLCYSSGLGAV-T-AVTHLLSAGDHIISG-DDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIKP------NTK 145 (393)
Q Consensus 77 ~i~~~~G~~al-~-~~~~~~~~gd~vl~~-~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~~------~~~ 145 (393)
.+++|.|+..+ . +...+++.|-.|++. ...-.. .......++..+.++..+ ++.|.+++++.++. +..
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKA-AEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46777777777 4 445677788777762 322111 111111122234444444 45577776665542 456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 82 ~li~~A 87 (244)
T 1edo_A 82 VVVNNA 87 (244)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 351
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=28.47 E-value=2.3e+02 Score=22.74 Aligned_cols=98 Identities=14% Similarity=0.068 Sum_probs=53.1
Q ss_pred HHHHHHHHHHhCCCcEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCC---HHHHHh
Q psy12791 62 RNLERCIASLEEAKHGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRK---IENLIK 138 (393)
Q Consensus 62 ~~lr~~la~~~~~~~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d---~~~l~~ 138 (393)
.++-+.+++-++.+-.+..++-..++.....+ ..|-.|+++. ++|...++ +..+++|+.++... +..+..
T Consensus 17 ~~~~~~i~~e~~~~i~i~~~~l~~~v~~a~~~-~~~~dVIISR---Ggta~~lr---~~~~iPVV~I~~s~~Dil~al~~ 89 (196)
T 2q5c_A 17 LNLFPKLALEKNFIPITKTASLTRASKIAFGL-QDEVDAIISR---GATSDYIK---KSVSIPSISIKVTRFDTMRAVYN 89 (196)
T ss_dssp HHHHHHHHHHHTCEEEEEECCHHHHHHHHHHH-TTTCSEEEEE---HHHHHHHH---TTCSSCEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHHhhhCCceEEEECCHHHHHHHHHHh-cCCCeEEEEC---ChHHHHHH---HhCCCCEEEEcCCHhHHHHHHHH
Confidence 33444444444443244555544456445555 6676688775 54433333 44689999999863 233333
Q ss_pred hcCCCCcEEEEecCCCCcccccCHHHHHHHHH
Q psy12791 139 YIKPNTKMVWIENPTNPLMTVFDVKAISAVVK 170 (393)
Q Consensus 139 ~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~ 170 (393)
+-+...+.-++..++-+. ..+.+.++..
T Consensus 90 a~~~~~kIavvg~~~~~~----~~~~~~~ll~ 117 (196)
T 2q5c_A 90 AKRFGNELALIAYKHSIV----DKHEIEAMLG 117 (196)
T ss_dssp HGGGCSEEEEEEESSCSS----CHHHHHHHHT
T ss_pred HHhhCCcEEEEeCcchhh----HHHHHHHHhC
Confidence 333345677777766433 3555555554
No 352
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=28.40 E-value=1.1e+02 Score=23.78 Aligned_cols=74 Identities=18% Similarity=0.194 Sum_probs=46.9
Q ss_pred CccchHHHHHHhcccCCcEEEeeCCC-CHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHHHhC--CCcEEEEeC
Q psy12791 106 VYGGTYRYFAQVAPKIGLEVDFVDLR-KIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVVKQH--PDILLVLDN 181 (393)
Q Consensus 106 ~y~~~~~~~~~~~~~~g~~v~~~~~~-d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~--~~~~livDe 181 (393)
.|.-........++..|.+++.+..+ .++++.+.+. .++.+|.++.-..+ ....++++.+.+++. +++.+++=.
T Consensus 30 ~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~~~--~~~~~~~~i~~L~~~g~~~i~v~vGG 107 (161)
T 2yxb_A 30 GHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILNGA--HLHLMKRLMAKLRELGADDIPVVLGG 107 (161)
T ss_dssp SCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESSSC--HHHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred ccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeechh--hHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 34433345666778899999998765 6677666554 56888888766533 334467777777765 134444433
No 353
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=28.38 E-value=1.8e+02 Score=24.90 Aligned_cols=86 Identities=15% Similarity=0.140 Sum_probs=49.4
Q ss_pred EEEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCC
Q psy12791 77 GLCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTN 154 (393)
Q Consensus 77 ~i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~n 154 (393)
.|++|+|+--+ .++..+++.|..|.+..-. ... .. . .+++++..++. .+.+.+.+. +..+|+-+....
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~----~~-~--~~~~~~~~Dl~-~~~~~~~~~-~~d~Vih~a~~~ 73 (311)
T 3m2p_A 4 KIAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGN----KA-I--NDYEYRVSDYT-LEDLINQLN-DVDAVVHLAATR 73 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC------------CCEEEECCCC-HHHHHHHTT-TCSEEEECCCCC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCc----cc-C--CceEEEEcccc-HHHHHHhhc-CCCEEEEccccC
Confidence 45666555555 4455667778777665443 321 11 1 27888888888 888888876 566666543322
Q ss_pred Cccc--------ccCHHHHHHHHHhC
Q psy12791 155 PLMT--------VFDVKAISAVVKQH 172 (393)
Q Consensus 155 ptG~--------~~~~~~l~~l~~~~ 172 (393)
.... +.....+.+.|++.
T Consensus 74 ~~~~~~~~~~~n~~~~~~ll~a~~~~ 99 (311)
T 3m2p_A 74 GSQGKISEFHDNEILTQNLYDACYEN 99 (311)
T ss_dssp CSSSCGGGTHHHHHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHc
Confidence 2111 01135677778776
No 354
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=28.37 E-value=1.3e+02 Score=24.97 Aligned_cols=73 Identities=14% Similarity=0.106 Sum_probs=39.4
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEE--EeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEV--DFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v--~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++..-.-.. .....++..|.++ ...++.|.+++++.++ .+..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP---EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH---HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchh---HHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 457777777777 44 45677788887765432211 1222223334444 4445557776666543 2456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 85 ~lv~nA 90 (249)
T 2ew8_A 85 ILVNNA 90 (249)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665543
No 355
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=28.30 E-value=1.2e+02 Score=25.73 Aligned_cols=29 Identities=21% Similarity=0.203 Sum_probs=20.7
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGD 104 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~ 104 (393)
..+++|.|+..| .. ...+++.|-+|++.+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence 467888888888 44 456778888887653
No 356
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=28.20 E-value=41 Score=28.09 Aligned_cols=54 Identities=6% Similarity=0.035 Sum_probs=36.9
Q ss_pred CCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcCCCCcEEEEecCC
Q psy12791 97 GDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIKPNTKMVWIENPT 153 (393)
Q Consensus 97 gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~~~~~~v~l~~p~ 153 (393)
|.+|+++.|.-.+. .+...++..|.+++.+|.- +.++....+ .+...|+++++|
T Consensus 1 G~~vlvtRp~~~~~--~l~~~L~~~G~~~~~~P~i~i~~~~~~~~~~~~l-~~~d~viftS~~ 60 (240)
T 3mw8_A 1 GMKLLLTRPEGKNA--AMASALDALAIPYLVEPLLSVEAAAVTQAQLDEL-SRADILIFISTS 60 (240)
T ss_dssp CCCEEECSCTTSCH--HHHHHHHHHTCCEEECCSCEEEECCCCHHHHHHH-TTCSEEEECSHH
T ss_pred CCEEEEeCChHHhH--HHHHHHHHCCCcEEEeCcEEEeccccHHHHHHHh-cCCCEEEEECHH
Confidence 67899999876543 4666778889999888763 333333334 346778877776
No 357
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=28.02 E-value=2.4e+02 Score=22.96 Aligned_cols=71 Identities=13% Similarity=0.141 Sum_probs=42.6
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcc-cCCcEEEeeCCCCHHHHHhhcCC--CCcEEEEe
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAP-KIGLEVDFVDLRKIENLIKYIKP--NTKMVWIE 150 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~-~~g~~v~~~~~~d~~~l~~~l~~--~~~~v~l~ 150 (393)
..+++|.|+..| .. +..+++.|.+|++....-. ......+ ..+.++...++.|.+++.+.++. +..+|+-+
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQA----DLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence 467777777777 44 4556777877776543211 1222222 23667777777788888887763 35555543
No 358
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=27.97 E-value=2.2e+02 Score=23.14 Aligned_cols=72 Identities=14% Similarity=0.117 Sum_probs=43.5
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcc-cCCcEEEeeCCCCHHHHHhhcCC--CCcEEEEe
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAP-KIGLEVDFVDLRKIENLIKYIKP--NTKMVWIE 150 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~-~~g~~v~~~~~~d~~~l~~~l~~--~~~~v~l~ 150 (393)
..+++|.|+..| . +...+++.|-+|++....-. ......+ ..+.++...++.|.+++.+.++. +..+|+-+
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS----DLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 83 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence 357777777777 4 44567778877776543221 1222222 23667777777788888887763 35666654
Q ss_pred c
Q psy12791 151 N 151 (393)
Q Consensus 151 ~ 151 (393)
.
T Consensus 84 A 84 (244)
T 1cyd_A 84 A 84 (244)
T ss_dssp C
T ss_pred C
Confidence 3
No 359
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=27.96 E-value=1.4e+02 Score=24.60 Aligned_cols=75 Identities=9% Similarity=-0.071 Sum_probs=38.4
Q ss_pred EEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCCCCHHHHHhhcC------CCCcE
Q psy12791 77 GLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDLRKIENLIKYIK------PNTKM 146 (393)
Q Consensus 77 ~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l~------~~~~~ 146 (393)
.+++|+|+..| . ++..+++.|-+|++....-...........+..+ +.+...++.|.+++.+.++ .+..+
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDV 83 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 46777777777 4 4455677787777654322111001111112223 3444555557777766554 14566
Q ss_pred EEEec
Q psy12791 147 VWIEN 151 (393)
Q Consensus 147 v~l~~ 151 (393)
++.+.
T Consensus 84 li~~A 88 (250)
T 2cfc_A 84 LVNNA 88 (250)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66543
No 360
>2g1d_A 30S ribosomal protein S24E; complete proteome, ribosome; NMR {Thermoplasma acidophilum} SCOP: d.12.1.3
Probab=27.85 E-value=29 Score=24.76 Aligned_cols=25 Identities=24% Similarity=0.329 Sum_probs=20.0
Q ss_pred CCCchHHHHHHHHHHHhCCC-cEEEe
Q psy12791 56 SNNPTRRNLERCIASLEEAK-HGLCY 80 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~-~~i~~ 80 (393)
-++|...+++++||+.++++ +.|++
T Consensus 28 ~~tpsk~eirekLA~~~~~~~~~vvv 53 (98)
T 2g1d_A 28 SRTPSREEIKELIAKHEGVDKELVIV 53 (98)
T ss_dssp TSCCCHHHHHHHHHHHHHSCSTTEEC
T ss_pred CCCCCHHHHHHHHHHHHCCCCCEEEE
Confidence 35788999999999999986 55544
No 361
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=27.69 E-value=1.3e+02 Score=25.90 Aligned_cols=91 Identities=14% Similarity=0.141 Sum_probs=51.0
Q ss_pred EEeccHHHHH--HHHHHhcCCCCeEEE-cCCC-c---cchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEe
Q psy12791 78 LCYSSGLGAV--TAVTHLLSAGDHIIS-GDDV-Y---GGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIE 150 (393)
Q Consensus 78 i~~~~G~~al--~~~~~~~~~gd~vl~-~~~~-y---~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~ 150 (393)
|++++|+..+ .++..+++.|-.|.+ .... - ........ .+...|++++..++.|.+.+.+++.. ...|+.+
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~-~~~~~~v~~v~~D~~d~~~l~~a~~~-~d~vi~~ 84 (321)
T 3c1o_A 7 IIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLRE-EFRSMGVTIIEGEMEEHEKMVSVLKQ-VDIVISA 84 (321)
T ss_dssp EEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHH-HHHHTTCEEEECCTTCHHHHHHHHTT-CSEEEEC
T ss_pred EEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHH-HhhcCCcEEEEecCCCHHHHHHHHcC-CCEEEEC
Confidence 5555544444 444556666755544 3322 1 11100111 12346888998888899999988864 6666654
Q ss_pred cCCCCcccccCHHHHHHHHHhCCC
Q psy12791 151 NPTNPLMTVFDVKAISAVVKQHPD 174 (393)
Q Consensus 151 ~p~nptG~~~~~~~l~~l~~~~~~ 174 (393)
.... . +.....+.+.|++. +
T Consensus 85 a~~~--~-~~~~~~l~~aa~~~-g 104 (321)
T 3c1o_A 85 LPFP--M-ISSQIHIINAIKAA-G 104 (321)
T ss_dssp CCGG--G-SGGGHHHHHHHHHH-C
T ss_pred CCcc--c-hhhHHHHHHHHHHh-C
Confidence 3321 1 33356788888877 6
No 362
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=27.67 E-value=2.1e+02 Score=24.19 Aligned_cols=75 Identities=13% Similarity=0.100 Sum_probs=39.6
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEE--eeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVD--FVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~--~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|+|+..| . ++..+++.|..|++..-.-. ........++..+.++. ..++.|.+++.+.++ .+..
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id 123 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQK-SCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVD 123 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHH-HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHH-HHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 467788777777 4 44567788888876432211 11111122223344444 445557777666553 2456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+|+-+.
T Consensus 124 ~li~~A 129 (285)
T 2c07_A 124 ILVNNA 129 (285)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665543
No 363
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=27.64 E-value=1.4e+02 Score=25.34 Aligned_cols=76 Identities=9% Similarity=0.003 Sum_probs=41.4
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEe--eCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDF--VDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~--~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++....-... ......++..|.++.. .++.|.+++.+.++ .+..
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 103 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNV-SAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIG 103 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 568888888888 44 456778888887654332211 1122223334545544 45557776665553 1455
Q ss_pred EEEEecC
Q psy12791 146 MVWIENP 152 (393)
Q Consensus 146 ~v~l~~p 152 (393)
+++-+..
T Consensus 104 ~lv~nAg 110 (279)
T 3sju_A 104 ILVNSAG 110 (279)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 5554433
No 364
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=27.53 E-value=2.6e+02 Score=22.97 Aligned_cols=119 Identities=13% Similarity=0.113 Sum_probs=57.6
Q ss_pred chHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCCCCHHH
Q psy12791 59 PTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDLRKIEN 135 (393)
Q Consensus 59 ~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~~d~~~ 135 (393)
+....+-..+++..+....+=+++|+-.. ..+...+.++.+|+..+..-. ........++..|. ++..+. .|..+
T Consensus 56 ~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~-~~~~a~~~~~~~g~~~~i~~~~-gda~~ 133 (237)
T 3c3y_A 56 PLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDRE-AYEIGLPFIRKAGVEHKINFIE-SDAML 133 (237)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHH-HHHHHHHHHHHTTCGGGEEEEE-SCHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEE-cCHHH
Confidence 44445555556665555666666665443 333334444557776655422 11223333344454 243332 24433
Q ss_pred HHhhc------CCCCcEEEEecCCCCcccccCHHHHHHHHHhC--CCcEEEEeCccCc
Q psy12791 136 LIKYI------KPNTKMVWIENPTNPLMTVFDVKAISAVVKQH--PDILLVLDNTFLT 185 (393)
Q Consensus 136 l~~~l------~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~--~~~~livDea~~~ 185 (393)
+...+ ...-.+|++.... ....++.+.+.+. ||.++++|++...
T Consensus 134 ~l~~l~~~~~~~~~fD~I~~d~~~------~~~~~~l~~~~~~L~pGG~lv~d~~~~~ 185 (237)
T 3c3y_A 134 ALDNLLQGQESEGSYDFGFVDADK------PNYIKYHERLMKLVKVGGIVAYDNTLWG 185 (237)
T ss_dssp HHHHHHHSTTCTTCEEEEEECSCG------GGHHHHHHHHHHHEEEEEEEEEECTTGG
T ss_pred HHHHHHhccCCCCCcCEEEECCch------HHHHHHHHHHHHhcCCCeEEEEecCCcC
Confidence 32222 2345778875321 1233333333332 4778888887643
No 365
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=27.44 E-value=76 Score=26.23 Aligned_cols=74 Identities=12% Similarity=0.109 Sum_probs=38.6
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEc-CCCccchHHHHHHhcccCCcEE--EeeCCCCHHHHHhhcCC------CC
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISG-DDVYGGTYRYFAQVAPKIGLEV--DFVDLRKIENLIKYIKP------NT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~-~~~y~~~~~~~~~~~~~~g~~v--~~~~~~d~~~l~~~l~~------~~ 144 (393)
..+++|.|+..| . +...+++.|-+|++. ...-.. .......++..+.++ ...++.|.+++.+.++. +.
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 84 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTS-LDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRI 84 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSH-HHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHH-HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 357788777777 4 445677778777765 322221 111222222334444 44455577766665531 45
Q ss_pred cEEEEe
Q psy12791 145 KMVWIE 150 (393)
Q Consensus 145 ~~v~l~ 150 (393)
.+++-+
T Consensus 85 d~vi~~ 90 (247)
T 2hq1_A 85 DILVNN 90 (247)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 555543
No 366
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=27.42 E-value=2.5e+02 Score=23.94 Aligned_cols=94 Identities=11% Similarity=0.075 Sum_probs=53.5
Q ss_pred CCCcEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecC
Q psy12791 73 EAKHGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENP 152 (393)
Q Consensus 73 ~~~~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p 152 (393)
+....++++.|..+-.++..+.+.|.+|.+.+.+... ....+ ..|+++. +.+++ . +..+|+-+.|
T Consensus 117 ~~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~k----a~~la-~~~~~~~--~~~~l-------~-~~DiVInaTp 181 (269)
T 3phh_A 117 NYQNALILGAGGSAKALACELKKQGLQVSVLNRSSRG----LDFFQ-RLGCDCF--MEPPK-------S-AFDLIINATS 181 (269)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT----HHHHH-HHTCEEE--SSCCS-------S-CCSEEEECCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHH-HCCCeEe--cHHHh-------c-cCCEEEEccc
Confidence 3446888888876643344444556778887777653 33344 4455444 33332 1 5677777777
Q ss_pred CCCcc-cccCHHHHHHHHHhCCCcEEEEeCccC
Q psy12791 153 TNPLM-TVFDVKAISAVVKQHPDILLVLDNTFL 184 (393)
Q Consensus 153 ~nptG-~~~~~~~l~~l~~~~~~~~livDea~~ 184 (393)
....+ ..+|.+.+.+..+.. .+++|-+|.
T Consensus 182 ~Gm~~~~~l~~~~l~~~l~~~---~~v~D~vY~ 211 (269)
T 3phh_A 182 ASLHNELPLNKEVLKGYFKEG---KLAYDLAYG 211 (269)
T ss_dssp TCCCCSCSSCHHHHHHHHHHC---SEEEESCCS
T ss_pred CCCCCCCCCChHHHHhhCCCC---CEEEEeCCC
Confidence 54322 234555555455543 367899986
No 367
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=27.30 E-value=1.2e+02 Score=25.72 Aligned_cols=64 Identities=9% Similarity=0.018 Sum_probs=39.4
Q ss_pred cEEEeccHHHHH-HHH-HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--CHHHHHhhcCC
Q psy12791 76 HGLCYSSGLGAV-TAV-THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--KIENLIKYIKP 142 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~-~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--d~~~l~~~l~~ 142 (393)
..+++|.|+..| .++ ..+.+.|-+|++.+..-.. ......+..|.++..+..| |.+++++.+..
T Consensus 10 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~---~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~ 77 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD---ETLDIIAKDGGNASALLIDFADPLAAKDSFTD 77 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH---HHHHHHHHTTCCEEEEECCTTSTTTTTTSSTT
T ss_pred CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH---HHHHHHHHhCCcEEEEEccCCCHHHHHHHHHh
Confidence 467888888888 554 5678888888776543221 2333445567666665544 66666655543
No 368
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=27.28 E-value=1.2e+02 Score=26.25 Aligned_cols=91 Identities=15% Similarity=0.137 Sum_probs=52.1
Q ss_pred EEEeccHHHHH--HHHHHhcCCCCeEEE-cCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCC
Q psy12791 77 GLCYSSGLGAV--TAVTHLLSAGDHIIS-GDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPT 153 (393)
Q Consensus 77 ~i~~~~G~~al--~~~~~~~~~gd~vl~-~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~ 153 (393)
.|++++++..+ .++..+++.|..|.+ ....-.. ...... ....|++++..++.|.+.+.+++. +...|+.+...
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~-~~~~~~-l~~~~v~~v~~Dl~d~~~l~~a~~-~~d~vi~~a~~ 89 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSK-TTLLDE-FQSLGAIIVKGELDEHEKLVELMK-KVDVVISALAF 89 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSC-HHHHHH-HHHTTCEEEECCTTCHHHHHHHHT-TCSEEEECCCG
T ss_pred eEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCch-hhHHHH-hhcCCCEEEEecCCCHHHHHHHHc-CCCEEEECCch
Confidence 35665554444 444556666755543 3322111 111111 234688999889889999998886 46666654332
Q ss_pred CCcccccCHHHHHHHHHhCCC
Q psy12791 154 NPLMTVFDVKAISAVVKQHPD 174 (393)
Q Consensus 154 nptG~~~~~~~l~~l~~~~~~ 174 (393)
. . +.....+.+.|++. +
T Consensus 90 ~--~-~~~~~~l~~aa~~~-g 106 (318)
T 2r6j_A 90 P--Q-ILDQFKILEAIKVA-G 106 (318)
T ss_dssp G--G-STTHHHHHHHHHHH-C
T ss_pred h--h-hHHHHHHHHHHHhc-C
Confidence 1 1 33457788888877 5
No 369
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=27.26 E-value=94 Score=26.28 Aligned_cols=74 Identities=7% Similarity=-0.036 Sum_probs=40.3
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEc-CCCccchHHHHHHhcccCCcEEEeeC--CCCHHHHHhhcC------CCC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISG-DDVYGGTYRYFAQVAPKIGLEVDFVD--LRKIENLIKYIK------PNT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~-~~~y~~~~~~~~~~~~~~g~~v~~~~--~~d~~~l~~~l~------~~~ 144 (393)
..+++|.|+..| .. ...+++.|-.|++. ...-. ........++..+.++..+. +.|.+++.+.++ .+.
T Consensus 27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 105 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANRE-AADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRL 105 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH-HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChh-HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 568888888888 44 45677888887654 32221 11122223334455555554 446666655543 145
Q ss_pred cEEEEe
Q psy12791 145 KMVWIE 150 (393)
Q Consensus 145 ~~v~l~ 150 (393)
.+++.+
T Consensus 106 d~li~n 111 (272)
T 4e3z_A 106 DGLVNN 111 (272)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 555544
No 370
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=27.22 E-value=82 Score=27.54 Aligned_cols=78 Identities=12% Similarity=0.143 Sum_probs=44.0
Q ss_pred cEEEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcc--cCCcEEEeeCCCCHHHHHhhcCC-CCcEEEEe
Q psy12791 76 HGLCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAP--KIGLEVDFVDLRKIENLIKYIKP-NTKMVWIE 150 (393)
Q Consensus 76 ~~i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~--~~g~~v~~~~~~d~~~l~~~l~~-~~~~v~l~ 150 (393)
..+++|.|+.-| .++..+++.|..|++..-.-............ ..+++++..++.|.+.+.+.+.. +..+|+-+
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 85 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHF 85 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEEC
Confidence 357777776667 44456777888887654322211111111111 23566666677788888887753 46666654
Q ss_pred cCC
Q psy12791 151 NPT 153 (393)
Q Consensus 151 ~p~ 153 (393)
...
T Consensus 86 A~~ 88 (341)
T 3enk_A 86 AAL 88 (341)
T ss_dssp CCC
T ss_pred ccc
Confidence 433
No 371
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=27.22 E-value=64 Score=27.16 Aligned_cols=61 Identities=15% Similarity=0.202 Sum_probs=35.2
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEE--eeCCCCHHHHHhhc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVD--FVDLRKIENLIKYI 140 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~--~~~~~d~~~l~~~l 140 (393)
..+++|.|+..| .. ...+++.|-+|++.+..-. ......+..+.++. ..++.|.+++.+.+
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 73 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNES----NIARIREEFGPRVHALRSDIADLNEIAVLG 73 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHGGGEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHhCCcceEEEccCCCHHHHHHHH
Confidence 467778888887 44 4567788888877654322 23333333344444 44555776666544
No 372
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=27.07 E-value=1.7e+02 Score=24.73 Aligned_cols=29 Identities=17% Similarity=0.177 Sum_probs=20.8
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGD 104 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~ 104 (393)
..+++|.|+..| .. ...+++.|-+|++.+
T Consensus 12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 467888888888 44 456778888887653
No 373
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=26.98 E-value=1.8e+02 Score=24.03 Aligned_cols=64 Identities=8% Similarity=-0.020 Sum_probs=34.2
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEc-CCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISG-DDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYI 140 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~-~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l 140 (393)
..+++|.|+..| .. ...+++.|..|++. ...-.. ........+..+.++..+ +..|.+++++.+
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 76 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEE-AEETVYEIQSNGGSAFSIGANLESLHGVEALY 76 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHH-HHHHHHHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHHHHHhcCCceEEEecCcCCHHHHHHHH
Confidence 467888888887 44 45677888887663 322221 111222233445555554 444655554443
No 374
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=26.91 E-value=1.6e+02 Score=25.26 Aligned_cols=29 Identities=17% Similarity=0.146 Sum_probs=20.8
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGD 104 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~ 104 (393)
..+++|.|+..| .. ...+++.|-.|++.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~ 59 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREGADIIAID 59 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 467888888888 44 456778888887653
No 375
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=26.89 E-value=2.5e+02 Score=23.73 Aligned_cols=75 Identities=7% Similarity=0.014 Sum_probs=41.6
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCCCCHHHHHhhcCC------CCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDLRKIENLIKYIKP------NTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~~d~~~l~~~l~~------~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++....-.... ......+..|. ..+..++.|.+++++.++. +..
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD 111 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQ-VVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGID 111 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGH-HHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 477888888888 44 4567788888876554332211 12222233343 4444555577776665541 456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 112 ~lvnnA 117 (276)
T 3r1i_A 112 IAVCNA 117 (276)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 376
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=26.88 E-value=81 Score=26.32 Aligned_cols=72 Identities=10% Similarity=0.063 Sum_probs=40.3
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++....-. ......+..+ ......++.|.+++++.++ .+..
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSES----GAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHH----HHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888888887 44 4567788888877643322 1222222222 3445556667776666553 1455
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 86 ~lv~nA 91 (248)
T 3op4_A 86 ILVNNA 91 (248)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 655443
No 377
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=26.60 E-value=1.4e+02 Score=25.80 Aligned_cols=76 Identities=12% Similarity=0.232 Sum_probs=41.5
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEE--eeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVD--FVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~--~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|+|+..| .. ...+++.|-+|++....-... ......++..|.++. ..++.|.+++.+.++ .+..
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 110 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPAL-EQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVD 110 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 467888888888 44 456778888887765433211 111222233344444 445557776666553 2456
Q ss_pred EEEEecC
Q psy12791 146 MVWIENP 152 (393)
Q Consensus 146 ~v~l~~p 152 (393)
+++-+..
T Consensus 111 ~lvnnAg 117 (301)
T 3tjr_A 111 VVFSNAG 117 (301)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665433
No 378
>3hvm_A Agmatine deiminase; hydrolase; 2.10A {Helicobacter pylori} SCOP: d.126.1.6 PDB: 2cmu_A
Probab=26.51 E-value=31 Score=30.71 Aligned_cols=48 Identities=19% Similarity=0.277 Sum_probs=36.6
Q ss_pred cCCCCchHHHHHHHHHHHhCCCcEEEeccH------HHH-HHHHHHhcCCCCeEE
Q psy12791 54 SRSNNPTRRNLERCIASLEEAKHGLCYSSG------LGA-VTAVTHLLSAGDHII 101 (393)
Q Consensus 54 ~~~~~~~~~~lr~~la~~~~~~~~i~~~~G------~~a-l~~~~~~~~~gd~vl 101 (393)
+|.|.-..+++++.|.+++|++..|-+..| +.+ +-.+..++.||-.++
T Consensus 163 nRNP~lsk~eiE~~L~~~LGv~kviWL~~G~l~~DdTdgHID~larFv~p~~v~~ 217 (330)
T 3hvm_A 163 NRNPHLNQNGIETMLKKELGAKQVLWYSYGYLKGDDTDSHTDTLARFLDKDTIVY 217 (330)
T ss_dssp TTSTTSCHHHHHHHHHHHHCCSEEEEECCCCCTTCCSSCCGGGTEEEEETTEEEE
T ss_pred CCCCCCCHHHHHHHHHHHhCCCEEEEECCCCcCCCCCCccchheeEecCCCEEEE
Confidence 455666788999999999999999999877 344 456777888884433
No 379
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=26.46 E-value=1.7e+02 Score=25.08 Aligned_cols=61 Identities=13% Similarity=0.128 Sum_probs=25.3
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEee-CC-CCHHHHHhhcCCCCcEEEEecCCCCcccc
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFV-DL-RKIENLIKYIKPNTKMVWIENPTNPLMTV 159 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~-~~-~d~~~l~~~l~~~~~~v~l~~p~nptG~~ 159 (393)
|-+++++-.+... ..+...++.+|++.+.+ .. .+.+.+..........|++.+....||..
T Consensus 125 dgvii~Dlp~ee~-~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~ 187 (267)
T 3vnd_A 125 DSVLIADVPVEES-APFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTE 187 (267)
T ss_dssp CEEEETTSCGGGC-HHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC---
T ss_pred CEEEeCCCCHhhH-HHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCc
Confidence 4555555444321 23445556666654432 22 23344433332222345554444445544
No 380
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=26.45 E-value=1.1e+02 Score=25.72 Aligned_cols=76 Identities=14% Similarity=0.121 Sum_probs=38.9
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEE--eeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVD--FVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~--~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| . +...+++.|-+|++....-...........+..|.++. ..++.|.+++.+.++ .+..
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 101 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD 101 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777777 4 44567778888776543321100001111022244444 445557776666553 1456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 102 ~lvnnA 107 (267)
T 1vl8_A 102 TVVNAA 107 (267)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665443
No 381
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=26.28 E-value=1.7e+02 Score=24.34 Aligned_cols=72 Identities=15% Similarity=0.068 Sum_probs=41.1
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccC--CcEEEeeCCCCHHHHHhhcCC------CCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKI--GLEVDFVDLRKIENLIKYIKP------NTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~--g~~v~~~~~~d~~~l~~~l~~------~~~ 145 (393)
..+++|.|+..| .. ...+++.|.+|++.+..-. ......+.. ++..+..++.|.+++.+.+.. +..
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD 88 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVM----AAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFD 88 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777777 44 4567778888876543221 122222222 455666677677777666542 456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 89 ~lv~~A 94 (263)
T 3ak4_A 89 LLCANA 94 (263)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665443
No 382
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=26.22 E-value=2.1e+02 Score=24.13 Aligned_cols=76 Identities=9% Similarity=0.016 Sum_probs=40.2
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccc------hHHHHHHhcccCCcEEEeeCC--CCHHHHHhhcC----
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGG------TYRYFAQVAPKIGLEVDFVDL--RKIENLIKYIK---- 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~------~~~~~~~~~~~~g~~v~~~~~--~d~~~l~~~l~---- 141 (393)
..+++|.|+..| .. ...+.+.|-+|++....-.. .........+..|.++..+.. .|.+++.+.++
T Consensus 7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 86 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVD 86 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 467778888788 44 45677888888765432211 011122222333556555544 47666655543
Q ss_pred --CCCcEEEEec
Q psy12791 142 --PNTKMVWIEN 151 (393)
Q Consensus 142 --~~~~~v~l~~ 151 (393)
.+..+++-+.
T Consensus 87 ~~g~iD~lvnnA 98 (274)
T 3e03_A 87 TFGGIDILVNNA 98 (274)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 2455555443
No 383
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=26.21 E-value=1.1e+02 Score=25.46 Aligned_cols=72 Identities=13% Similarity=0.150 Sum_probs=39.4
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|.+|++....-. ......+..+. .....++.|.+++.+.++ .+..
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 81 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDE----EGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 357777777777 44 4567778888776543211 22333333343 344455557777666553 1456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 82 ~lv~nA 87 (254)
T 1hdc_A 82 GLVNNA 87 (254)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665443
No 384
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=26.09 E-value=71 Score=26.62 Aligned_cols=35 Identities=6% Similarity=-0.003 Sum_probs=27.3
Q ss_pred CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEE
Q psy12791 143 NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVL 179 (393)
Q Consensus 143 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~liv 179 (393)
.+..|+++-. |..|.....+++.++|++| |..++.
T Consensus 178 ~Pa~VicEi~-~ddG~mar~~~l~~fA~~h-~l~~it 212 (227)
T 1snn_A 178 VPITTICEMM-GDDGNAMSKNETKRYAEKH-NLIYLS 212 (227)
T ss_dssp CSEEEEEEEB-CTTSSBCCHHHHHHHHHHH-TCCEEE
T ss_pred CceEEEEEEe-CCCCCcCCHHHHHHHHHHc-CCcEEE
Confidence 4566665544 5779999999999999999 877664
No 385
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=25.84 E-value=1.4e+02 Score=25.40 Aligned_cols=50 Identities=22% Similarity=0.209 Sum_probs=34.6
Q ss_pred cCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCC
Q psy12791 120 KIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPD 174 (393)
Q Consensus 120 ~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~ 174 (393)
..|++++..++.|.+.+.+++. +...|+.+..... +.....+.+.|++. +
T Consensus 54 ~~~v~~v~~D~~d~~~l~~~~~-~~d~vi~~a~~~~---~~~~~~l~~aa~~~-g 103 (307)
T 2gas_A 54 SLGVILLEGDINDHETLVKAIK-QVDIVICAAGRLL---IEDQVKIIKAIKEA-G 103 (307)
T ss_dssp HTTCEEEECCTTCHHHHHHHHT-TCSEEEECSSSSC---GGGHHHHHHHHHHH-C
T ss_pred hCCCEEEEeCCCCHHHHHHHHh-CCCEEEECCcccc---cccHHHHHHHHHhc-C
Confidence 4688888888889999988886 4666665443211 33456777888876 5
No 386
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=25.27 E-value=1.2e+02 Score=25.16 Aligned_cols=66 Identities=12% Similarity=0.131 Sum_probs=33.8
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCCCCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDLRKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l~ 141 (393)
..+++|.|+..| . +...+++.|-+|++..-.-...........+..+ +.....++.|.+++.+.++
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~ 84 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ 84 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHH
Confidence 357777777777 4 4456777787776554321211111222222223 3444555557776665543
No 387
>1xkn_A Putative peptidyl-arginine deiminase; alpha-beta protein, NESG, structural genomics, protein struc initiative, PSI; 1.60A {Chlorobium tepidum} SCOP: d.126.1.6
Probab=24.95 E-value=51 Score=29.72 Aligned_cols=124 Identities=13% Similarity=0.170 Sum_probs=65.7
Q ss_pred cCCCCchHHHHHHHHHHHhCCCcEEEeccHH-----HH-HHHHHHhcCCCCeEEEcC-CCccchHHH---HHHhccc---
Q psy12791 54 SRSNNPTRRNLERCIASLEEAKHGLCYSSGL-----GA-VTAVTHLLSAGDHIISGD-DVYGGTYRY---FAQVAPK--- 120 (393)
Q Consensus 54 ~~~~~~~~~~lr~~la~~~~~~~~i~~~~G~-----~a-l~~~~~~~~~gd~vl~~~-~~y~~~~~~---~~~~~~~--- 120 (393)
+|.|.-..+++++.|.+++|++..|-+..|. .. +-.+..++.+|-.++... ......+.. ....++.
T Consensus 179 nRNp~ls~~~ie~~L~~~LG~~~viwL~~Gl~~DdtdgHiD~~arfv~p~~vl~~~~~d~~d~~y~~~~~~~~~L~~~~d 258 (355)
T 1xkn_A 179 NRNPSLGKAEIEAQLRRYLGIEKVLWLGDGIAGDDTDGHVDDMARFVNENTVVIAVEEDPEDENYKPLRENYELLKTMTG 258 (355)
T ss_dssp TTCTTCCHHHHHHHHHHHHCCSEEEEECCCCTTCTTSSCGGGTEEEEETTEEEEECCCCTTSTTHHHHHHHHHHHTTCBC
T ss_pred CCCCCCCHHHHHHHHHHHcCCcEEEEeCCccCCCCCCcchhheeEeeCCCEEEEEcCCCCCCccHHHHHHHHHHHHhhhh
Confidence 3555557889999999999999888888762 22 345566778774444322 122222222 2222332
Q ss_pred ---CCcEEEeeCCCCHHHH-HhhcC-C------CCcEEEEecCCCCcccccCHHHHHHHHHhCCCc-EEEEeC
Q psy12791 121 ---IGLEVDFVDLRKIENL-IKYIK-P------NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDI-LLVLDN 181 (393)
Q Consensus 121 ---~g~~v~~~~~~d~~~l-~~~l~-~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~livDe 181 (393)
.+.+++.+|..+.-.. ...+. . -..+|++..-..| .|-..+..+.+.+||- ++-+|.
T Consensus 259 a~Gr~~~ii~lp~p~~~~~~g~rl~asY~Nfli~Ng~VivP~fgd~----~D~~A~~~L~~~fP~r~Vi~v~~ 327 (355)
T 1xkn_A 259 LDGKPLNIVKLPMPEPVYYDGERLPASYANFYIANTVVLVPTYRCP----RDQQAIDILQQCFPKREVVGIDC 327 (355)
T ss_dssp TTSCBCEEEEECCCSCCEETTEECCCCTTCCEECSSEEEEEECSST----HHHHHHHHHHHHCTTSEEEEEEC
T ss_pred ccCCceEEEEeCCCCccccCCCcccceeeEEEEECCEEEEeeCCCc----ccHHHHHHHHHHCCCCEEEEeeH
Confidence 3578888887531000 00111 0 1244555333332 2555666666666554 455554
No 388
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=24.95 E-value=42 Score=28.73 Aligned_cols=56 Identities=13% Similarity=0.013 Sum_probs=38.9
Q ss_pred CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcC--CCCcEEEEecCC
Q psy12791 96 AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIK--PNTKMVWIENPT 153 (393)
Q Consensus 96 ~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~--~~~~~v~l~~p~ 153 (393)
.|.+|++..|.-.+. .+...++..|++++.+|+- +.+.+.+.+. .+...|+++++|
T Consensus 13 ~g~~IlvTRp~~~a~--~l~~~L~~~G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~n 76 (269)
T 3re1_A 13 SAWRLLLTRPAEESA--ALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSKP 76 (269)
T ss_dssp CCCEEEECSCHHHHH--HHHHHHHTTTCEEEECCCCEEEECCCHHHHHHHHHTGGGSSEEEECSHH
T ss_pred CCCEEEEeCChHHHH--HHHHHHHHCCCCEEEcCCEEEecCCCcHHHHHHHHhccCCCEEEEECHH
Confidence 478999999875432 4667788899999998873 4444544432 246788887777
No 389
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=24.88 E-value=1.3e+02 Score=24.78 Aligned_cols=75 Identities=13% Similarity=0.061 Sum_probs=38.9
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhccc-CC--cEEEeeCCCCHHHHHhhcC------CCC
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPK-IG--LEVDFVDLRKIENLIKYIK------PNT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~-~g--~~v~~~~~~d~~~l~~~l~------~~~ 144 (393)
..+++|.|+..+ . +...+++.|.+|++....-.. .......+.. .+ +.....++.|.+++.+.++ .+.
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 86 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGER-AKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGI 86 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHH-HHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 457777777777 4 445677788887765432211 0011111111 23 3444455557777666554 245
Q ss_pred cEEEEec
Q psy12791 145 KMVWIEN 151 (393)
Q Consensus 145 ~~v~l~~ 151 (393)
.+|+-+.
T Consensus 87 d~vi~~A 93 (248)
T 2pnf_A 87 DILVNNA 93 (248)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 6666543
No 390
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=24.82 E-value=85 Score=23.73 Aligned_cols=35 Identities=17% Similarity=0.384 Sum_probs=24.7
Q ss_pred CCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCc
Q psy12791 143 NTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLT 185 (393)
Q Consensus 143 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~ 185 (393)
.++.+++... .. -+++.++++++ |+.++-+.+...
T Consensus 94 gi~~i~~~~g-----~~--~~~~~~~a~~~-Gir~vgpnc~g~ 128 (140)
T 1iuk_A 94 RPGLVWLQSG-----IR--HPEFEKALKEA-GIPVVADRCLMV 128 (140)
T ss_dssp CCSCEEECTT-----CC--CHHHHHHHHHT-TCCEEESCCHHH
T ss_pred CCCEEEEcCC-----cC--HHHHHHHHHHc-CCEEEcCCccce
Confidence 4566665322 21 48899999999 999998887653
No 391
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=24.71 E-value=87 Score=26.99 Aligned_cols=75 Identities=5% Similarity=-0.031 Sum_probs=42.4
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCcc-chHHHHHHhcccCCcEEEeeCCC--CHHHHHhhcC------CCC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYG-GTYRYFAQVAPKIGLEVDFVDLR--KIENLIKYIK------PNT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~-~~~~~~~~~~~~~g~~v~~~~~~--d~~~l~~~l~------~~~ 144 (393)
..+++|.|+..| .. ...+++.|-+|++....-. ..........+..|.++..+..| |.+++++.++ .+.
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 129 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGL 129 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 467888888888 44 4567788988877543311 11112233334456666666554 6666655543 245
Q ss_pred cEEEEe
Q psy12791 145 KMVWIE 150 (393)
Q Consensus 145 ~~v~l~ 150 (393)
.+++.+
T Consensus 130 D~lv~n 135 (294)
T 3r3s_A 130 DILALV 135 (294)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 555544
No 392
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=24.65 E-value=1.7e+02 Score=21.29 Aligned_cols=88 Identities=11% Similarity=0.009 Sum_probs=45.6
Q ss_pred cEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
..++++.|.-+..++..+.+.|-.|++.+..-. ... .++..|..+...+..+.+.+.+.--.+..+|+++.++..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~----~~~-~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 82 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINEE----KVN-AYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI 82 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCHH----HHH-TTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHH-HHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCch
Confidence 466777776654334444445555555433211 122 234456666655666777776541235678887766531
Q ss_pred cccccCHHHHHHHHHhC
Q psy12791 156 LMTVFDVKAISAVVKQH 172 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~ 172 (393)
. .-..+...+++.
T Consensus 83 ~----~~~~~~~~~~~~ 95 (144)
T 2hmt_A 83 Q----ASTLTTLLLKEL 95 (144)
T ss_dssp H----HHHHHHHHHHHT
T ss_pred H----HHHHHHHHHHHc
Confidence 1 112345556665
No 393
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=24.58 E-value=1.7e+02 Score=25.09 Aligned_cols=81 Identities=16% Similarity=0.139 Sum_probs=35.5
Q ss_pred CeEEEcCCCccchHHHHHHhcccCCcEEEee-CC-CCHHHHHhhcCCCCcEEEEecCCCCccccc--C--HHHHHHHHHh
Q psy12791 98 DHIISGDDVYGGTYRYFAQVAPKIGLEVDFV-DL-RKIENLIKYIKPNTKMVWIENPTNPLMTVF--D--VKAISAVVKQ 171 (393)
Q Consensus 98 d~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~-~~-~d~~~l~~~l~~~~~~v~l~~p~nptG~~~--~--~~~l~~l~~~ 171 (393)
|-+++++..+.. ...+...++.+|+..+.+ .. .+.+.+.+........|++.+-...||... + +.++.+.+++
T Consensus 127 dGvIipDlp~ee-~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~ 205 (271)
T 3nav_A 127 DSVLIADVPTNE-SQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQ 205 (271)
T ss_dssp CEEEETTSCGGG-CHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHH
T ss_pred CEEEECCCCHHH-HHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHH
Confidence 566776655532 224556667777765533 22 233444443332334556545545566543 1 3444444444
Q ss_pred CCCcEEEE
Q psy12791 172 HPDILLVL 179 (393)
Q Consensus 172 ~~~~~liv 179 (393)
+.+.++++
T Consensus 206 ~~~~Pv~v 213 (271)
T 3nav_A 206 FDAPPALL 213 (271)
T ss_dssp TTCCCEEE
T ss_pred hcCCCEEE
Confidence 32444444
No 394
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=24.57 E-value=2.9e+02 Score=22.51 Aligned_cols=120 Identities=17% Similarity=0.141 Sum_probs=57.7
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCCCCHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDLRKIE 134 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~~d~~ 134 (393)
.+....+-..+++.......+-+++|+-.. ..+...+.++.+|+..+..-. ........++..|. ++..+. .|..
T Consensus 57 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~-~~~~a~~~~~~~g~~~~i~~~~-~d~~ 134 (232)
T 3cbg_A 57 SPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPN-ATAIAKKYWQKAGVAEKISLRL-GPAL 134 (232)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHH-HHHHHHHHHHHHTCGGGEEEEE-SCHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEE-cCHH
Confidence 455555555556555555666777775444 334434444556766654432 11112222233343 233332 2443
Q ss_pred HH-HhhcC----CCCcEEEEecCCCCcccccCHHHHHHHHHhC--CCcEEEEeCccCc
Q psy12791 135 NL-IKYIK----PNTKMVWIENPTNPLMTVFDVKAISAVVKQH--PDILLVLDNTFLT 185 (393)
Q Consensus 135 ~l-~~~l~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~--~~~~livDea~~~ 185 (393)
+. ..... ....+|++..+ ..+..++.+.+.+. ||.++++|++...
T Consensus 135 ~~l~~l~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 186 (232)
T 3cbg_A 135 ATLEQLTQGKPLPEFDLIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNVLWH 186 (232)
T ss_dssp HHHHHHHTSSSCCCEEEEEECSC------GGGHHHHHHHHHHTEEEEEEEEEECTTGG
T ss_pred HHHHHHHhcCCCCCcCEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCCCcC
Confidence 32 22211 33577776543 12334444444443 5778888887654
No 395
>2xzm_P RPS24E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_P
Probab=24.52 E-value=60 Score=25.01 Aligned_cols=25 Identities=8% Similarity=0.169 Sum_probs=20.1
Q ss_pred CCCchHHHHHHHHHHHhCCC-cEEEe
Q psy12791 56 SNNPTRRNLERCIASLEEAK-HGLCY 80 (393)
Q Consensus 56 ~~~~~~~~lr~~la~~~~~~-~~i~~ 80 (393)
-++|...++++.||+.++++ +.|++
T Consensus 30 ~aTpSk~eIrekLAkmy~~~~d~VvV 55 (149)
T 2xzm_P 30 SPTASKEKIREELAKQLKVDARNVVV 55 (149)
T ss_dssp SCSCCHHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCCCEEEE
Confidence 35788999999999999987 55544
No 396
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=24.45 E-value=1.1e+02 Score=24.81 Aligned_cols=88 Identities=11% Similarity=0.057 Sum_probs=49.3
Q ss_pred EEEeccHHHHH-H-HHHHhc-CCCCeEEEcCCCccchHHHHHHhc-ccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecC
Q psy12791 77 GLCYSSGLGAV-T-AVTHLL-SAGDHIISGDDVYGGTYRYFAQVA-PKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENP 152 (393)
Q Consensus 77 ~i~~~~G~~al-~-~~~~~~-~~gd~vl~~~~~y~~~~~~~~~~~-~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p 152 (393)
.++++.|+..+ . ++..++ +.|-+|++..-.-.. ...... ...+++++..++.|.+++.+.+. +..+|+.+..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vv~~ag 82 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKT---RIPPEIIDHERVTVIEGSFQNPGXLEQAVT-NAEVVFVGAM 82 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHH---HSCHHHHTSTTEEEEECCTTCHHHHHHHHT-TCSEEEESCC
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccc---cchhhccCCCceEEEECCCCCHHHHHHHHc-CCCEEEEcCC
Confidence 36666666666 4 445566 678777664322110 011111 33456777777779999988885 5667665443
Q ss_pred CCCcccccCHHHHHHHHHhC
Q psy12791 153 TNPLMTVFDVKAISAVVKQH 172 (393)
Q Consensus 153 ~nptG~~~~~~~l~~l~~~~ 172 (393)
.. .+. .+.+.+.+++.
T Consensus 83 ~~---n~~-~~~~~~~~~~~ 98 (221)
T 3r6d_A 83 ES---GSD-MASIVKALSRX 98 (221)
T ss_dssp CC---HHH-HHHHHHHHHHT
T ss_pred CC---Chh-HHHHHHHHHhc
Confidence 21 111 56666666665
No 397
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=24.28 E-value=2.2e+02 Score=23.88 Aligned_cols=61 Identities=10% Similarity=0.200 Sum_probs=34.8
Q ss_pred cEEEeccHHHHH-HHH-HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-TAV-THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~-~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~ 141 (393)
..+++|.|+..| .++ ..+.+.|-+|++.+..-.. .. ......+.....++.|.+++++.++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~----~~-~~~~~~~~~~~~Dv~~~~~v~~~~~ 74 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADG----VH-APRHPRIRREELDITDSQRLQRLFE 74 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTS----TT-SCCCTTEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH----Hh-hhhcCCeEEEEecCCCHHHHHHHHH
Confidence 467888888888 544 5677889888876543221 11 1112223334445557666666554
No 398
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=24.20 E-value=3e+02 Score=23.03 Aligned_cols=76 Identities=13% Similarity=0.166 Sum_probs=39.5
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCC----cEEEeeCCCCHHHHHhhcC------CC
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG----LEVDFVDLRKIENLIKYIK------PN 143 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g----~~v~~~~~~d~~~l~~~l~------~~ 143 (393)
..+++|.|+..| . ++..+++.|-.|++....-.. .......++..| +.+...++.|.+++.+.++ .+
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 111 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGN-IEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSG 111 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHH-HHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 467777777777 4 445667778777765432211 111112222222 2344445557777666553 24
Q ss_pred CcEEEEecC
Q psy12791 144 TKMVWIENP 152 (393)
Q Consensus 144 ~~~v~l~~p 152 (393)
..+|+-+..
T Consensus 112 iD~vi~~Ag 120 (279)
T 1xg5_A 112 VDICINNAG 120 (279)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 566665433
No 399
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=24.17 E-value=1.5e+02 Score=24.57 Aligned_cols=66 Identities=9% Similarity=-0.023 Sum_probs=35.2
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhccc----CCcEEEeeCCCCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPK----IGLEVDFVDLRKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~----~g~~v~~~~~~d~~~l~~~l~ 141 (393)
..+++|.|+..| .. ...+++.|-+|++....-............. ..+.+...++.|.+++.+.+.
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 79 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIK 79 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHH
Confidence 467788888887 44 4456777888877644322111111111111 234455556667776666553
No 400
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=23.95 E-value=2.2e+02 Score=23.10 Aligned_cols=72 Identities=8% Similarity=-0.031 Sum_probs=41.0
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhccc-CCcEEEeeCCCCHHHHHhhcC------CCCcE
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPK-IGLEVDFVDLRKIENLIKYIK------PNTKM 146 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~-~g~~v~~~~~~d~~~l~~~l~------~~~~~ 146 (393)
..+++|+|+..+ . +...+++.|..|++....-. ........ .++.....++.|.+++.+.++ .+..+
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEK----RLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSA 81 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 457888888777 4 44567778877776543211 12222222 256666677777777666553 14556
Q ss_pred EEEec
Q psy12791 147 VWIEN 151 (393)
Q Consensus 147 v~l~~ 151 (393)
++-+.
T Consensus 82 li~~A 86 (234)
T 2ehd_A 82 LVNNA 86 (234)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 65543
No 401
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=23.95 E-value=2.6e+02 Score=23.17 Aligned_cols=76 Identities=9% Similarity=0.048 Sum_probs=39.7
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhccc---C-CcEEEeeCCCCHHHHHhhcCC-----CC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPK---I-GLEVDFVDLRKIENLIKYIKP-----NT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~---~-g~~v~~~~~~d~~~l~~~l~~-----~~ 144 (393)
..+++|.|+..| .. ...+++.|.+|++....-... ......... . .+.+...++.|.+++.+.++. ..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gi 86 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKL-EAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGA 86 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 457777777777 44 456777888887654322110 011111111 1 345555566677777666541 25
Q ss_pred cEEEEecC
Q psy12791 145 KMVWIENP 152 (393)
Q Consensus 145 ~~v~l~~p 152 (393)
.+++-+..
T Consensus 87 d~lv~~Ag 94 (260)
T 2z1n_A 87 DILVYSTG 94 (260)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 66665433
No 402
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=23.93 E-value=2.2e+02 Score=22.99 Aligned_cols=76 Identities=9% Similarity=0.095 Sum_probs=49.6
Q ss_pred CccchHHHHHHhcccCCcEEEeeCCC-CHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHHHHHHHhC---CCcEEEEe
Q psy12791 106 VYGGTYRYFAQVAPKIGLEVDFVDLR-KIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAISAVVKQH---PDILLVLD 180 (393)
Q Consensus 106 ~y~~~~~~~~~~~~~~g~~v~~~~~~-d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~---~~~~livD 180 (393)
.|.-........++..|.+++.+..+ ..+++.+.+. .++.+|.++.-..+ ....++++.+.+++. +++.+++=
T Consensus 100 ~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~~~--~~~~~~~~i~~l~~~~~~~~~~v~vG 177 (210)
T 1y80_A 100 LHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALLTT--TMMNMKSTIDALIAAGLRDRVKVIVG 177 (210)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCSGG--GTHHHHHHHHHHHHTTCGGGCEEEEE
T ss_pred ccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence 34333445667788999999998775 5677766654 46888888765433 333477777777765 13677776
Q ss_pred Ccc
Q psy12791 181 NTF 183 (393)
Q Consensus 181 ea~ 183 (393)
...
T Consensus 178 G~~ 180 (210)
T 1y80_A 178 GAP 180 (210)
T ss_dssp STT
T ss_pred CCC
Confidence 544
No 403
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=23.75 E-value=2.7e+02 Score=22.01 Aligned_cols=118 Identities=13% Similarity=0.155 Sum_probs=58.3
Q ss_pred CchHHHHHHHHHHHhCCCcEEEeccHHHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCc--EEEeeCCCCHH
Q psy12791 58 NPTRRNLERCIASLEEAKHGLCYSSGLGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGL--EVDFVDLRKIE 134 (393)
Q Consensus 58 ~~~~~~lr~~la~~~~~~~~i~~~~G~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~--~v~~~~~~d~~ 134 (393)
.+....+-+.+++.......+=+++|+-.. ..+...+.++.+|+..+..-. ........++..|. ++..+. .|..
T Consensus 41 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~~~~~~v~~~~-~d~~ 118 (210)
T 3c3p_A 41 DRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRD-NVEHARRMLHDNGLIDRVELQV-GDPL 118 (210)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHH-HHHHHHHHHHHHSGGGGEEEEE-SCHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHCCCCceEEEEE-ecHH
Confidence 344445555555555555666677776654 444444443567776665432 11122222233333 233332 2444
Q ss_pred HHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhC--CCcEEEEeCccC
Q psy12791 135 NLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQH--PDILLVLDNTFL 184 (393)
Q Consensus 135 ~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~--~~~~livDea~~ 184 (393)
++...+.. ..+|++..+ ......+.+.+.+. ||..+++|++..
T Consensus 119 ~~~~~~~~-fD~v~~~~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 119 GIAAGQRD-IDILFMDCD------VFNGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp HHHTTCCS-EEEEEEETT------TSCHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred HHhccCCC-CCEEEEcCC------hhhhHHHHHHHHHhcCCCeEEEEECccc
Confidence 44333334 677776532 22344555555543 577788887654
No 404
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=23.72 E-value=2.2e+02 Score=23.83 Aligned_cols=69 Identities=6% Similarity=0.028 Sum_probs=41.0
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCC------CCcEE
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKP------NTKMV 147 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~------~~~~v 147 (393)
..+++|.|+..| .. ...+++.|-+|++....-.. .....+..+..++.|.+++.+.++. +..++
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--------~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 100 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP--------SADPDIHTVAGDISKPETADRIVREGIERFGRIDSL 100 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------CSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhh--------cccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 567888888888 44 45677888888765432221 1222455556666677776665542 45666
Q ss_pred EEecC
Q psy12791 148 WIENP 152 (393)
Q Consensus 148 ~l~~p 152 (393)
+-+..
T Consensus 101 v~nAg 105 (260)
T 3un1_A 101 VNNAG 105 (260)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65443
No 405
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=23.67 E-value=85 Score=23.44 Aligned_cols=38 Identities=11% Similarity=0.071 Sum_probs=23.3
Q ss_pred HHHHhhcCCCCcEEEEecCCCCcccccC-------HHHHHHHHHhC
Q psy12791 134 ENLIKYIKPNTKMVWIENPTNPLMTVFD-------VKAISAVVKQH 172 (393)
Q Consensus 134 ~~l~~~l~~~~~~v~l~~p~nptG~~~~-------~~~l~~l~~~~ 172 (393)
+-+..++..+...|++.| |.|+|...| -++|.+.++-.
T Consensus 58 ei~~~Al~~~A~~vIl~H-NHPSG~~~PS~~D~~~T~~l~~a~~ll 102 (126)
T 2qlc_A 58 EIFKAAIRESAHSIILVH-NHPSGDVQPSNADKQVTSILKKAGDLL 102 (126)
T ss_dssp HHHHHHHHTTCSEEEEEE-ECSSSCCSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEEe-cCCCCCCCCCHHHHHHHHHHHHHHHHC
Confidence 445666766766666643 447798888 33455555554
No 406
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=23.57 E-value=2e+02 Score=23.72 Aligned_cols=75 Identities=15% Similarity=0.100 Sum_probs=40.3
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| . +...+++.|.+|++....-.. .......++..+ +.++..++.|.+++.+.++ .+..
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 92 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAM-ATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVD 92 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777777 4 445677778887765432211 111111222234 4445555557777766654 2456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+|+.+.
T Consensus 93 ~vi~~A 98 (260)
T 3awd_A 93 ILVACA 98 (260)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 407
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=23.52 E-value=1.8e+02 Score=23.97 Aligned_cols=75 Identities=9% Similarity=0.054 Sum_probs=39.2
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEE--EeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEV--DFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v--~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++..-.-.. .......++..|.++ ...++.|.+++.+.++ .+..
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 86 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEK-LRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLD 86 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777777 44 45677788777765432211 111111122234444 4445557776666553 2456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 87 ~lv~nA 92 (247)
T 2jah_A 87 ILVNNA 92 (247)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665543
No 408
>1zbr_A AAQ65385, conserved hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.60A {Porphyromonas gingivalis} SCOP: d.126.1.6
Probab=23.44 E-value=55 Score=29.42 Aligned_cols=123 Identities=12% Similarity=0.125 Sum_probs=67.9
Q ss_pred cCCCCchHHHHHHHHHHHhCCCcEEEeccH------HHH-HHHHHHhcCCCCeEEEc--CCCccchHHH---HHHhcc--
Q psy12791 54 SRSNNPTRRNLERCIASLEEAKHGLCYSSG------LGA-VTAVTHLLSAGDHIISG--DDVYGGTYRY---FAQVAP-- 119 (393)
Q Consensus 54 ~~~~~~~~~~lr~~la~~~~~~~~i~~~~G------~~a-l~~~~~~~~~gd~vl~~--~~~y~~~~~~---~~~~~~-- 119 (393)
+|.|.-..+++++.|.+++|++..|-+..| +.. +-.+..++.+|-.++.. ++..+ .+.. ....++
T Consensus 169 nRNp~ls~~eie~~L~~~LGv~kviWL~~G~l~~DdTdgHiD~larFv~p~~vl~~~~~d~~d~-~y~~~~~~~~~L~~~ 247 (349)
T 1zbr_A 169 NRNAGLSRTAIIDTLKESLGVSRVLSLRHGALAGDDTDGHIDTLARFVDTRTIVYVRSEDPSDE-HYSDLTAMEQELKEL 247 (349)
T ss_dssp TTSTTSCHHHHHHHHHHHSCCSEEEEESSCCCTTCCSSSCGGGSEEEEETTEEEEEECCCTTST-THHHHHHHHHHHHHC
T ss_pred CcCCCCCHHHHHHHHHHHhCCcEEEEecCCccCCCCcCcchhheEEecCCCEEEEEcCCCCCCc-cHHHHHHHHHHHHhh
Confidence 455556788999999999999998888877 344 45567778887444332 33322 2212 122222
Q ss_pred ----cCCcEEEeeCCCCHHHH-HhhcCC---C----CcEEEEecCCCCcccccCHHHHHHHHHhCCCc-EEEEeC
Q psy12791 120 ----KIGLEVDFVDLRKIENL-IKYIKP---N----TKMVWIENPTNPLMTVFDVKAISAVVKQHPDI-LLVLDN 181 (393)
Q Consensus 120 ----~~g~~v~~~~~~d~~~l-~~~l~~---~----~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~-~livDe 181 (393)
-.+.+++.+|..+.-.. ...+.. + ..+|++..-.-| .|-..+..+.+.+|+- ++-+|.
T Consensus 248 ~da~Gr~~~ii~lp~p~~~~~~g~rl~asY~Nfli~Ng~VivP~fgd~----~D~~A~~~l~~~fP~r~Vv~i~~ 318 (349)
T 1zbr_A 248 RRPDGQPYRLVPLPMAEALYDGADRLPATYANFLIINGAVLVPTYDSH----LDAVALSVMQGLFPDREVIGIDC 318 (349)
T ss_dssp BCTTSCBCEEEEEECCCCCEETTEECCCCSSCCEEETTEEEEEECSST----TTTHHHHHHHHHCTTSEEEEEEC
T ss_pred hhccCCceEEEEeCCCCccccCCCcccceeeEEEEECCEEEEeeCCCc----ccHHHHHHHHHHCCCCEEEEeeH
Confidence 23578888887532000 011111 1 245555443333 2556666666666554 444553
No 409
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=23.40 E-value=47 Score=28.40 Aligned_cols=71 Identities=11% Similarity=0.068 Sum_probs=41.2
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccC--CcEEEeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKI--GLEVDFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~--g~~v~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++..-.-. ......+.. .+.....++.|.+++.+.++ .+..
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLD----ALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888888888 44 4567788888877643322 233333333 34455556667777666553 1455
Q ss_pred EEEEe
Q psy12791 146 MVWIE 150 (393)
Q Consensus 146 ~v~l~ 150 (393)
+++-+
T Consensus 105 ~lVnn 109 (272)
T 4dyv_A 105 VLFNN 109 (272)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 65544
No 410
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=23.39 E-value=1.3e+02 Score=21.30 Aligned_cols=53 Identities=11% Similarity=0.205 Sum_probs=35.1
Q ss_pred CHHHHHhhcCC-CCcEEEEecCCCCcccccC----HHHHHHHHHhCCCcEEEEeCccC
Q psy12791 132 KIENLIKYIKP-NTKMVWIENPTNPLMTVFD----VKAISAVVKQHPDILLVLDNTFL 184 (393)
Q Consensus 132 d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~livDea~~ 184 (393)
+.+.+.+.+.+ ++..+++-.|-|..|..-+ .++..+..++.+--+..+||-++
T Consensus 39 ~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 39 DVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 45666666654 5889999999888888776 33444444443123678899765
No 411
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=23.36 E-value=3.2e+02 Score=25.22 Aligned_cols=73 Identities=12% Similarity=0.056 Sum_probs=40.8
Q ss_pred EEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCC-cEEEeeCCCCHHHHHhhcCCCCcEEEEecCCC
Q psy12791 77 GLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG-LEVDFVDLRKIENLIKYIKPNTKMVWIENPTN 154 (393)
Q Consensus 77 ~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g-~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~n 154 (393)
.+++++|..+-..+..+.+.|..|.+.+..-. .....++..+ .....++..|.+++.+.+. +..+|+.+.|..
T Consensus 6 VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~----~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~-~~DvVIn~a~~~ 79 (450)
T 1ff9_A 6 VLMLGSGFVTRPTLDVLTDSGIKVTVACRTLE----SAKKLSAGVQHSTPISLDVNDDAALDAEVA-KHDLVISLIPYT 79 (450)
T ss_dssp EEEECCSTTHHHHHHHHHTTTCEEEEEESSHH----HHHHTTTTCTTEEEEECCTTCHHHHHHHHT-TSSEEEECCC--
T ss_pred EEEECCCHHHHHHHHHHHhCcCEEEEEECCHH----HHHHHHHhcCCceEEEeecCCHHHHHHHHc-CCcEEEECCccc
Confidence 45555554332333445566767776544322 2344444433 5556667777888877775 578888777653
No 412
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=23.12 E-value=1.5e+02 Score=25.22 Aligned_cols=74 Identities=12% Similarity=0.092 Sum_probs=38.7
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++....-.. .......+...| ++..+ ++.|.+++++.++ .+..
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~-~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 107 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEA-CADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSARLD 107 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 467777777777 44 45677788888776533221 111111122233 44444 4447666665543 2456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 108 ~lvnnA 113 (276)
T 2b4q_A 108 ILVNNA 113 (276)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665443
No 413
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=23.10 E-value=1.8e+02 Score=24.45 Aligned_cols=61 Identities=8% Similarity=-0.012 Sum_probs=36.2
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~ 141 (393)
..+++|+|+..| .. ...+++.|-+|++..-.-. .... ...........++.|.+++.+.++
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~ 79 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVE----RLKA-LNLPNTLCAQVDVTDKYTFDTAIT 79 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHH----HHHT-TCCTTEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHH----HHHH-hhcCCceEEEecCCCHHHHHHHHH
Confidence 467888888888 44 4567778877776543221 2222 222345566666667777666554
No 414
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=23.04 E-value=3.6e+02 Score=23.49 Aligned_cols=75 Identities=16% Similarity=0.141 Sum_probs=41.2
Q ss_pred cEEEeccHHHHH--HHHHHhcC--CCCeEEEcCCCccchH---------HHHHHhcccCCcEEEeeCCCCHHHHHhhcCC
Q psy12791 76 HGLCYSSGLGAV--TAVTHLLS--AGDHIISGDDVYGGTY---------RYFAQVAPKIGLEVDFVDLRKIENLIKYIKP 142 (393)
Q Consensus 76 ~~i~~~~G~~al--~~~~~~~~--~gd~vl~~~~~y~~~~---------~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~ 142 (393)
..|++|+|+.-+ .++..+++ .|..|++.+-.-.... .... .....+++++..++.|.+.+.+....
T Consensus 11 ~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~ 89 (362)
T 3sxp_A 11 QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFK-NLIGFKGEVIAADINNPLDLRRLEKL 89 (362)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGG-GGTTCCSEEEECCTTCHHHHHHHTTS
T ss_pred CEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhh-hccccCceEEECCCCCHHHHHHhhcc
Confidence 357777766666 44456667 7877766532111000 0001 11223557777777788888887334
Q ss_pred CCcEEEEec
Q psy12791 143 NTKMVWIEN 151 (393)
Q Consensus 143 ~~~~v~l~~ 151 (393)
+..+|+-+.
T Consensus 90 ~~D~vih~A 98 (362)
T 3sxp_A 90 HFDYLFHQA 98 (362)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 567766543
No 415
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=23.00 E-value=1.9e+02 Score=25.35 Aligned_cols=68 Identities=18% Similarity=0.303 Sum_probs=41.6
Q ss_pred CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC---------CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHH
Q psy12791 96 AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR---------KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAI 165 (393)
Q Consensus 96 ~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~---------d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l 165 (393)
++..+++..+.|. | .++.+|++...+... ++.++.+.+++ +.++||.+.-.++ +.+
T Consensus 189 ~~~~~v~~H~af~-----Y--fa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~ 254 (312)
T 2o1e_A 189 EKKEFITQHTAFG-----Y--LAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIASS-------KVA 254 (312)
T ss_dssp SCCEEEESSCTTH-----H--HHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCCH-------HHH
T ss_pred CCCEEEEECCchH-----H--HHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 5677888877775 2 367889988765321 35556566654 4677765433322 344
Q ss_pred HHHHHhCCCcEEE
Q psy12791 166 SAVVKQHPDILLV 178 (393)
Q Consensus 166 ~~l~~~~~~~~li 178 (393)
..++++. |+.++
T Consensus 255 ~~ia~e~-g~~v~ 266 (312)
T 2o1e_A 255 DTLASEI-GAKTE 266 (312)
T ss_dssp HHHHHHT-CCEEE
T ss_pred HHHHHHh-CCcEE
Confidence 5567777 76653
No 416
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=22.91 E-value=1.4e+02 Score=24.50 Aligned_cols=105 Identities=10% Similarity=-0.018 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHhCCC---cEEEeccHHHHHHHHHH-hcCCCCeE-EEcC--CCccchHHHHHHhcccCCcEEEeeCCCCH
Q psy12791 61 RRNLERCIASLEEAK---HGLCYSSGLGAVTAVTH-LLSAGDHI-ISGD--DVYGGTYRYFAQVAPKIGLEVDFVDLRKI 133 (393)
Q Consensus 61 ~~~lr~~la~~~~~~---~~i~~~~G~~al~~~~~-~~~~gd~v-l~~~--~~y~~~~~~~~~~~~~~g~~v~~~~~~d~ 133 (393)
...|.+.+.+.+|.+ ..++++.|..+-..+.. ....|=++ .+.+ |.-. -....|..+.. .+|
T Consensus 64 v~~L~~~~~~~lg~~~~~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~--------g~~i~gv~V~~--~~d- 132 (211)
T 2dt5_A 64 VPVLKRELRHILGLNRKWGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKV--------GRPVRGGVIEH--VDL- 132 (211)
T ss_dssp HHHHHHHHHHHHTTTSCEEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTT--------TCEETTEEEEE--GGG-
T ss_pred hHHHHHHHHHHhCcCCCCEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHHH--------hhhhcCCeeec--HHh-
Confidence 456777777877765 47888888776422222 12223222 2222 2111 11223445443 234
Q ss_pred HHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEEEeCccCc
Q psy12791 134 ENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLVLDNTFLT 185 (393)
Q Consensus 134 ~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~livDea~~~ 185 (393)
+++.+.++...++++.|+.. .+++.+.|.+. |+..|+.++-..
T Consensus 133 --l~ell~~~ID~ViIA~Ps~~------~~ei~~~l~~a-Gi~~Ilnf~P~~ 175 (211)
T 2dt5_A 133 --LPQRVPGRIEIALLTVPREA------AQKAADLLVAA-GIKGILNFAPVV 175 (211)
T ss_dssp --HHHHSTTTCCEEEECSCHHH------HHHHHHHHHHH-TCCEEEECSSSC
T ss_pred --HHHHHHcCCCEEEEeCCchh------HHHHHHHHHHc-CCCEEEECCccc
Confidence 55555446789999888742 35888888888 888787776553
No 417
>3u5c_Y RP50, 40S ribosomal protein S24-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_U* 3j16_D 3u5g_Y
Probab=22.77 E-value=48 Score=25.15 Aligned_cols=24 Identities=17% Similarity=0.272 Sum_probs=19.8
Q ss_pred CCchHHHHHHHHHHHhCCC-cEEEe
Q psy12791 57 NNPTRRNLERCIASLEEAK-HGLCY 80 (393)
Q Consensus 57 ~~~~~~~lr~~la~~~~~~-~~i~~ 80 (393)
+.|...++++.||+.++++ +.|++
T Consensus 33 aTpsr~eIrekLAk~y~~~~d~VvV 57 (135)
T 3u5c_Y 33 ANVSKDELREKLAEVYKAEKDAVSV 57 (135)
T ss_dssp CCCCHHHHHHHHHTTTTSCGGGEEE
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEE
Confidence 5788999999999999987 55554
No 418
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=22.70 E-value=2.5e+02 Score=23.28 Aligned_cols=75 Identities=12% Similarity=0.079 Sum_probs=39.6
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC-------CCC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK-------PNT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~-------~~~ 144 (393)
..+++|.|+..| .. ...+++.|.+|++....-.. .......++..|.++..+ ++.|.+++.+.++ .+.
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 88 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKE-LNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKL 88 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777777 44 45677788887765432111 111111122235455444 5557776666553 345
Q ss_pred cEEEEec
Q psy12791 145 KMVWIEN 151 (393)
Q Consensus 145 ~~v~l~~ 151 (393)
.+++-+.
T Consensus 89 d~lv~~A 95 (260)
T 2ae2_A 89 NILVNNA 95 (260)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 6665443
No 419
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=22.61 E-value=1.7e+02 Score=25.45 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=40.3
Q ss_pred EEEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhccc-CCcEEEeeCCCCHHHHHhhcCC-CCcEEEEecC
Q psy12791 77 GLCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPK-IGLEVDFVDLRKIENLIKYIKP-NTKMVWIENP 152 (393)
Q Consensus 77 ~i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~-~g~~v~~~~~~d~~~l~~~l~~-~~~~v~l~~p 152 (393)
.+++|+|+.-+ .++..+++.|..|++.+..-.. ....+.. .+++++..++.|.+.+.+.+.. +..+|+-+..
T Consensus 23 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~ 98 (333)
T 2q1w_A 23 KVFITGICGQIGSHIAELLLERGDKVVGIDNFATG----RREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA 98 (333)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSC----CGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCcc----chhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECce
Confidence 56676666556 4445566778777654322111 0111111 3667777777788888777653 3566665433
No 420
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=22.57 E-value=1.2e+02 Score=25.54 Aligned_cols=75 Identities=9% Similarity=0.158 Sum_probs=39.5
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCC------CCcEE
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKP------NTKMV 147 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~------~~~~v 147 (393)
..+++|.|+..| . +...+++.|-+|++....-..............++.++..++.|.+++.+.++. +..++
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 96 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIM 96 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467777777777 4 445677778887765432211000111111111455566666677777666542 45666
Q ss_pred EEe
Q psy12791 148 WIE 150 (393)
Q Consensus 148 ~l~ 150 (393)
+-+
T Consensus 97 i~~ 99 (278)
T 2bgk_A 97 FGN 99 (278)
T ss_dssp EEC
T ss_pred EEC
Confidence 543
No 421
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=22.50 E-value=2.2e+02 Score=23.44 Aligned_cols=74 Identities=11% Similarity=-0.022 Sum_probs=40.2
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeC--CCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVD--LRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~--~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| . +...+++.|-+|++.+..-... ......++..+.++..+. +.|.+++.+.++ .+..
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 88 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAA-EAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGID 88 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777777 4 4456778888887754432211 112222233455555554 447666666553 1456
Q ss_pred EEEEe
Q psy12791 146 MVWIE 150 (393)
Q Consensus 146 ~v~l~ 150 (393)
.++.+
T Consensus 89 ~li~~ 93 (253)
T 3qiv_A 89 YLVNN 93 (253)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 65544
No 422
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=22.42 E-value=1.8e+02 Score=24.40 Aligned_cols=78 Identities=12% Similarity=0.034 Sum_probs=40.0
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCC---cEEEeeCCCCHHHHHhhcC------CCC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG---LEVDFVDLRKIENLIKYIK------PNT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g---~~v~~~~~~d~~~l~~~l~------~~~ 144 (393)
..+++|.|+..| .. ...+++.|-+|++....-..............+ +.....++.|.+++.+.++ .+.
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 88 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA 88 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 467777778787 44 456778888887764432211111111111122 3344455557666655543 245
Q ss_pred cEEEEecCC
Q psy12791 145 KMVWIENPT 153 (393)
Q Consensus 145 ~~v~l~~p~ 153 (393)
.+++-+...
T Consensus 89 d~lvnnAg~ 97 (265)
T 3lf2_A 89 SILVNNAGQ 97 (265)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 565554433
No 423
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=22.38 E-value=2.5e+02 Score=21.01 Aligned_cols=98 Identities=14% Similarity=0.084 Sum_probs=52.3
Q ss_pred cEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
..++++.|.-+-..+..+.+.|..|++.+..-......+.. ....|..++.-+..|.+.+.++--++.++|+++.++..
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~-~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 83 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQ-RLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDNDA 83 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHH-HHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCHH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHH-hhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCChH
Confidence 46777777665433444445565565544431110001111 12347888877777888887763346788888766521
Q ss_pred cccccCHHHHHHHHHhC-CCcEEEE
Q psy12791 156 LMTVFDVKAISAVVKQH-PDILLVL 179 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~-~~~~liv 179 (393)
.-..+...+++. +...+++
T Consensus 84 -----~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 84 -----DNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp -----HHHHHHHHHHHHTSSSCEEE
T ss_pred -----HHHHHHHHHHHHCCCCEEEE
Confidence 123345556553 3344444
No 424
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=22.32 E-value=1.9e+02 Score=25.31 Aligned_cols=69 Identities=9% Similarity=0.041 Sum_probs=42.3
Q ss_pred hcCCCCeEEEcCCCccchH---HHHHHhcccCCcEEEeeCCC-------------CHHHHHhhcC-CCCcEEEEecCCCC
Q psy12791 93 LLSAGDHIISGDDVYGGTY---RYFAQVAPKIGLEVDFVDLR-------------KIENLIKYIK-PNTKMVWIENPTNP 155 (393)
Q Consensus 93 ~~~~gd~vl~~~~~y~~~~---~~~~~~~~~~g~~v~~~~~~-------------d~~~l~~~l~-~~~~~v~l~~p~np 155 (393)
.+++||+|-+..|+.+... ....+.++.+|.+|+.-+.- ..++|.+++. ++.++|+..---.-
T Consensus 13 ~L~~Gd~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyg 92 (311)
T 1zl0_A 13 WQPIDGRVALIAPASAIATDVLEATLRQLEVHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYG 92 (311)
T ss_dssp CCCCCSEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSC
T ss_pred cCCCcCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCcC
Confidence 3678999988888765322 22334456789998875531 2456666654 34677777655544
Q ss_pred cccccC
Q psy12791 156 LMTVFD 161 (393)
Q Consensus 156 tG~~~~ 161 (393)
+-.++|
T Consensus 93 a~rlLp 98 (311)
T 1zl0_A 93 CGQLLP 98 (311)
T ss_dssp GGGGTT
T ss_pred HHHHhh
Confidence 445554
No 425
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=22.12 E-value=2.1e+02 Score=23.67 Aligned_cols=74 Identities=11% Similarity=0.034 Sum_probs=38.7
Q ss_pred EEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcE--EEeeCCCCHHHHHhhcC------CCCcE
Q psy12791 77 GLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLE--VDFVDLRKIENLIKYIK------PNTKM 146 (393)
Q Consensus 77 ~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~--v~~~~~~d~~~l~~~l~------~~~~~ 146 (393)
.+++|.|+..| .. ...+++.|.+|++....-.. .......++..|.+ .+..++.|.+++.+.++ .+..+
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDAT-AKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 82 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 46777777777 44 45677788887765432111 11111112223434 44445557777666554 24566
Q ss_pred EEEec
Q psy12791 147 VWIEN 151 (393)
Q Consensus 147 v~l~~ 151 (393)
++-+.
T Consensus 83 lv~nA 87 (256)
T 1geg_A 83 IVNNA 87 (256)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66543
No 426
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=22.07 E-value=1.3e+02 Score=25.64 Aligned_cols=91 Identities=11% Similarity=0.098 Sum_probs=50.9
Q ss_pred EEeccHHHHH--HHHHHhcCCCCeEEE-cCCCc----cchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEe
Q psy12791 78 LCYSSGLGAV--TAVTHLLSAGDHIIS-GDDVY----GGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIE 150 (393)
Q Consensus 78 i~~~~G~~al--~~~~~~~~~gd~vl~-~~~~y----~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~ 150 (393)
|++++|+..+ .++..+++.|..|.+ ....- ....... ..+...|++++..++.|.+.+.+++. +..+|+.+
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~-~~l~~~~v~~v~~D~~d~~~l~~~~~-~~d~vi~~ 84 (308)
T 1qyc_A 7 ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLL-ESFKASGANIVHGSIDDHASLVEAVK-NVDVVIST 84 (308)
T ss_dssp EEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHH-HHHHTTTCEEECCCTTCHHHHHHHHH-TCSEEEEC
T ss_pred EEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHH-HHHHhCCCEEEEeccCCHHHHHHHHc-CCCEEEEC
Confidence 5555554444 444556666766654 33221 1100011 11234688888888889999988876 45666654
Q ss_pred cCCCCcccccCHHHHHHHHHhCCC
Q psy12791 151 NPTNPLMTVFDVKAISAVVKQHPD 174 (393)
Q Consensus 151 ~p~nptG~~~~~~~l~~l~~~~~~ 174 (393)
.... .+.....+.+.|++. +
T Consensus 85 a~~~---~~~~~~~l~~aa~~~-g 104 (308)
T 1qyc_A 85 VGSL---QIESQVNIIKAIKEV-G 104 (308)
T ss_dssp CCGG---GSGGGHHHHHHHHHH-C
T ss_pred Ccch---hhhhHHHHHHHHHhc-C
Confidence 4321 123346778888876 5
No 427
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=21.97 E-value=3e+02 Score=21.86 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=50.7
Q ss_pred EEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCC-HHHHHhhcCCCCcEEEEecCCC
Q psy12791 78 LCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRK-IENLIKYIKPNTKMVWIENPTN 154 (393)
Q Consensus 78 i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d-~~~l~~~l~~~~~~v~l~~p~n 154 (393)
+++|.|+..+ .++..+++.|-.|++..-.-. ......+++++..++.| .+++.+.+. +..+|+.+....
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~-------~~~~~~~~~~~~~D~~d~~~~~~~~~~-~~d~vi~~ag~~ 74 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE-------QVPQYNNVKAVHFDVDWTPEEMAKQLH-GMDAIINVSGSG 74 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG-------GSCCCTTEEEEECCTTSCHHHHHTTTT-TCSEEEECCCCT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc-------chhhcCCceEEEecccCCHHHHHHHHc-CCCEEEECCcCC
Confidence 5666666666 445567777877765533221 11122577888888888 999998886 567777654332
Q ss_pred Ccc-cccC---HHHHHHHHHhC
Q psy12791 155 PLM-TVFD---VKAISAVVKQH 172 (393)
Q Consensus 155 ptG-~~~~---~~~l~~l~~~~ 172 (393)
... .-.+ ...+.+.|++.
T Consensus 75 ~~~~~~~n~~~~~~l~~a~~~~ 96 (219)
T 3dqp_A 75 GKSLLKVDLYGAVKLMQAAEKA 96 (219)
T ss_dssp TSSCCCCCCHHHHHHHHHHHHT
T ss_pred CCCcEeEeHHHHHHHHHHHHHh
Confidence 211 1111 44566666665
No 428
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=21.85 E-value=1.5e+02 Score=25.54 Aligned_cols=68 Identities=18% Similarity=0.373 Sum_probs=40.8
Q ss_pred CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCC---C------CHHHHHhhcC-CCCcEEEEecCCCCcccccCHHHH
Q psy12791 96 AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDL---R------KIENLIKYIK-PNTKMVWIENPTNPLMTVFDVKAI 165 (393)
Q Consensus 96 ~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~---~------d~~~l~~~l~-~~~~~v~l~~p~nptG~~~~~~~l 165 (393)
++..+++..+.|. | .++.+|+++..+.- . ++.++.+.++ .+.++||.+.-.++ +..
T Consensus 178 ~~~~~v~~H~af~-----Y--f~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 243 (286)
T 3gi1_A 178 RSKTFVTQHTAFS-----Y--LAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIA 243 (286)
T ss_dssp SCCEEEEEESCCH-----H--HHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHH
T ss_pred CCCEEEEECCchH-----H--HHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 5778888877775 2 36788988765432 1 3445555554 35777777543333 233
Q ss_pred HHHHHhCCCcEEE
Q psy12791 166 SAVVKQHPDILLV 178 (393)
Q Consensus 166 ~~l~~~~~~~~li 178 (393)
..++++. |+.++
T Consensus 244 ~~la~~~-g~~v~ 255 (286)
T 3gi1_A 244 HAIAKST-GAKVK 255 (286)
T ss_dssp HHHHHTT-TCEEE
T ss_pred HHHHHHh-CCeEE
Confidence 4567777 77654
No 429
>2jli_A YSCU, YOP proteins translocation protein; cell membrane, transmembrane, protein transport, type III secretion system, plasmid, membrane; 1.13A {Yersinia pestis}
Probab=21.75 E-value=88 Score=23.28 Aligned_cols=22 Identities=5% Similarity=0.247 Sum_probs=19.0
Q ss_pred HHHHHHHHHhCCCcEEEEeCccC
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFL 184 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~ 184 (393)
..+|.++|+++ |++++.|-.-+
T Consensus 73 A~~I~~~A~e~-~VPi~e~~~LA 94 (123)
T 2jli_A 73 VQTVRKIAEEE-GVPILQRIPLA 94 (123)
T ss_dssp HHHHHHHHHHH-TCCEEECHHHH
T ss_pred HHHHHHHHHHc-CCCEEeCHHHH
Confidence 67899999999 99999997544
No 430
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=21.56 E-value=2e+02 Score=23.92 Aligned_cols=75 Identities=11% Similarity=-0.007 Sum_probs=38.4
Q ss_pred EEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccch-HHHHHHhcccCCcEEE--eeCCCCHHHHHhhcC------CCCc
Q psy12791 77 GLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGT-YRYFAQVAPKIGLEVD--FVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 77 ~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~-~~~~~~~~~~~g~~v~--~~~~~d~~~l~~~l~------~~~~ 145 (393)
.+++|.|+..| .. ...+++.|-+|++....-... .......++..|.++. ..++.|.+++.+.++ .+..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 83 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFD 83 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 56777777777 44 455677787777654322210 1111122222344444 445557776666553 1456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 84 ~lv~nA 89 (258)
T 3a28_C 84 VLVNNA 89 (258)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 655443
No 431
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=21.45 E-value=93 Score=25.77 Aligned_cols=71 Identities=11% Similarity=0.134 Sum_probs=42.0
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhccc--CCcEEEeeCCCCHHHHHhhcCC--CCcEEEE
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPK--IGLEVDFVDLRKIENLIKYIKP--NTKMVWI 149 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~--~g~~v~~~~~~d~~~l~~~l~~--~~~~v~l 149 (393)
..+++|.|+..| .. ...+++.|-+|++....-. ......+. ....+...+..|.+++.+.+.+ +..+++.
T Consensus 15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~ 90 (249)
T 3f9i_A 15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEE----KLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVC 90 (249)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHH----HHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 578888888888 44 4567778888877654322 22222222 2345555666677777766643 3555554
Q ss_pred e
Q psy12791 150 E 150 (393)
Q Consensus 150 ~ 150 (393)
+
T Consensus 91 ~ 91 (249)
T 3f9i_A 91 N 91 (249)
T ss_dssp C
T ss_pred C
Confidence 3
No 432
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=21.35 E-value=1.5e+02 Score=24.74 Aligned_cols=75 Identities=12% Similarity=0.071 Sum_probs=38.5
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccC-C--cEEEeeCCCCHHHHHhhcC------CCC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKI-G--LEVDFVDLRKIENLIKYIK------PNT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~-g--~~v~~~~~~d~~~l~~~l~------~~~ 144 (393)
..+++|.|+..| .. ...+++.|-+|++....-.. .......++.. | +..+..++.|.+++.+.++ .+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDR-LHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGA 86 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 457777777777 44 45677788887765432111 00111111111 4 3444455557777666553 145
Q ss_pred cEEEEec
Q psy12791 145 KMVWIEN 151 (393)
Q Consensus 145 ~~v~l~~ 151 (393)
.+++-+.
T Consensus 87 d~lv~~A 93 (263)
T 3ai3_A 87 DILVNNA 93 (263)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 6665543
No 433
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=21.33 E-value=3.3e+02 Score=22.08 Aligned_cols=94 Identities=9% Similarity=0.079 Sum_probs=54.3
Q ss_pred cEEEeccHHHHHHHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCCC
Q psy12791 76 HGLCYSSGLGAVTAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTNP 155 (393)
Q Consensus 76 ~~i~~~~G~~al~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~np 155 (393)
..++++.|.-+-..+..+.+.|. |++.+..-. ..... . .|..++.-+..|.+.++++--++.++|+++.++..
T Consensus 11 ~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~----~~~~~-~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 83 (234)
T 2aef_A 11 HVVICGWSESTLECLRELRGSEV-FVLAEDENV----RKKVL-R-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS 83 (234)
T ss_dssp EEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG----HHHHH-H-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH
T ss_pred EEEEECCChHHHHHHHHHHhCCe-EEEEECCHH----HHHHH-h-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH
Confidence 46777777555444455555566 666654433 12222 3 67888887777888887763346788887765521
Q ss_pred cccccCHHHHHHHHHhC-CCcEEEEeC
Q psy12791 156 LMTVFDVKAISAVVKQH-PDILLVLDN 181 (393)
Q Consensus 156 tG~~~~~~~l~~l~~~~-~~~~livDe 181 (393)
.-..+...+++. +++.+++..
T Consensus 84 -----~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 84 -----ETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp -----HHHHHHHHHHHHCSSSEEEEEC
T ss_pred -----HHHHHHHHHHHHCCCCeEEEEE
Confidence 112344556664 344555543
No 434
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=21.09 E-value=2.6e+02 Score=23.76 Aligned_cols=76 Identities=11% Similarity=0.119 Sum_probs=38.8
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcc----cCC--cEEEeeCCCCHHHHHhhcCC-----
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAP----KIG--LEVDFVDLRKIENLIKYIKP----- 142 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~----~~g--~~v~~~~~~d~~~l~~~l~~----- 142 (393)
..+++|+|+..| . +...+++.|-+|++..-.-.........+.. ..+ +.++..++.|.+++.+.++.
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 98 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF 98 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence 467777777777 4 4456777887777654322111001111111 123 34444555577776665542
Q ss_pred -CCcEEEEec
Q psy12791 143 -NTKMVWIEN 151 (393)
Q Consensus 143 -~~~~v~l~~ 151 (393)
+..+|+-+.
T Consensus 99 g~id~li~~A 108 (303)
T 1yxm_A 99 GKINFLVNNG 108 (303)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 456666543
No 435
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=21.09 E-value=1.8e+02 Score=23.99 Aligned_cols=70 Identities=19% Similarity=0.188 Sum_probs=27.3
Q ss_pred HHHH-HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEecCCC
Q psy12791 84 LGAV-TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIENPTN 154 (393)
Q Consensus 84 ~~al-~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~p~n 154 (393)
++++ ..+......|.+|++..|.-...+. -..+....|.++..++..+.+++.+.+..+..+|++.=.+.
T Consensus 42 TT~lL~~a~r~~~~g~kVli~k~~~d~R~g-e~~i~s~~g~~~~a~~~~~~~~~~~~~~~~~dvViIDEaQF 112 (214)
T 2j9r_A 42 SEELIRRVRRTQFAKQHAIVFKPCIDNRYS-EEDVVSHNGLKVKAVPVSASKDIFKHITEEMDVIAIDEVQF 112 (214)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECC------------------CCEEECSSGGGGGGGCCSSCCEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccCCcch-HHHHHhhcCCeeEEeecCCHHHHHHHHhcCCCEEEEECccc
Confidence 3443 4444445567777776555432111 12334444555444444444444444433455666654443
No 436
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.08 E-value=1.3e+02 Score=25.29 Aligned_cols=71 Identities=8% Similarity=0.052 Sum_probs=39.1
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccC--CcEEEeeCCCCHHHHHhhcCC------CCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKI--GLEVDFVDLRKIENLIKYIKP------NTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~--g~~v~~~~~~d~~~l~~~l~~------~~~ 145 (393)
..+++|.|+..| .. ...+.+.|-+|++..-.-. ......+.. .+.....++.|.+++.+.++. +..
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 82 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREER----LLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH 82 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence 467777777777 44 4567778888776543221 233333332 334445555577766665532 345
Q ss_pred EEEEe
Q psy12791 146 MVWIE 150 (393)
Q Consensus 146 ~v~l~ 150 (393)
+++-+
T Consensus 83 ~lvnn 87 (263)
T 2a4k_A 83 GVAHF 87 (263)
T ss_dssp EEEEG
T ss_pred EEEEC
Confidence 55543
No 437
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=20.91 E-value=2.3e+02 Score=26.30 Aligned_cols=91 Identities=9% Similarity=0.023 Sum_probs=62.0
Q ss_pred HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCC-cEEEeeCC--CCHHHHHhhcCCC-CcEEEEecCCCCcccccCHH
Q psy12791 88 TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG-LEVDFVDL--RKIENLIKYIKPN-TKMVWIENPTNPLMTVFDVK 163 (393)
Q Consensus 88 ~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g-~~v~~~~~--~d~~~l~~~l~~~-~~~v~l~~p~nptG~~~~~~ 163 (393)
.....++++-+.+.+.+|....-+..|..+.+..| +.++-=+. .+++++.+.+..+ ...+.+ -++ -.|.+.+..
T Consensus 286 d~y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlI-Kvn-qiGGITEal 363 (441)
T 3qtp_A 286 AEYVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLI-KVN-QIGTLTETF 363 (441)
T ss_dssp HHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEE-CGG-GTCCHHHHH
T ss_pred HHHHHHhhhcceeeecCCCChHHHHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEe-ccc-ccccHHHHH
Confidence 44555566555788889987666666777777776 55544232 3678888887655 445544 333 457788889
Q ss_pred HHHHHHHhCCCcEEEEeC
Q psy12791 164 AISAVVKQHPDILLVLDN 181 (393)
Q Consensus 164 ~l~~l~~~~~~~~livDe 181 (393)
++.++|+++ |..+++=.
T Consensus 364 kaa~lA~~~-G~~vmvsH 380 (441)
T 3qtp_A 364 KTIKMAQEK-GWGVMASH 380 (441)
T ss_dssp HHHHHHHHT-TCEEEEEC
T ss_pred HHHHHHHHc-CCeEEEeC
Confidence 999999999 88776644
No 438
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=20.87 E-value=1.8e+02 Score=24.22 Aligned_cols=75 Identities=12% Similarity=0.053 Sum_probs=41.0
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEee--CCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFV--DLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~--~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++.+..-.. .......++..|.++..+ ++.|.+++.+.++ .+..
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 91 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEG-AEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKIT 91 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467888888888 44 45677778888776443221 111222233345555544 4447666665553 2456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+++-+.
T Consensus 92 ~lv~nA 97 (256)
T 3gaf_A 92 VLVNNA 97 (256)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665543
No 439
>2jlj_A YSCU, YOP proteins translocation protein U; cell membrane, transmembrane, yersinia pesits, protein trans type III secretion system, membrane; 1.3A {Yersinia pestis} PDB: 2jlh_A* 2v5g_A 2w0r_A
Probab=20.83 E-value=80 Score=24.24 Aligned_cols=22 Identities=5% Similarity=0.247 Sum_probs=19.1
Q ss_pred HHHHHHHHHhCCCcEEEEeCccC
Q psy12791 162 VKAISAVVKQHPDILLVLDNTFL 184 (393)
Q Consensus 162 ~~~l~~l~~~~~~~~livDea~~ 184 (393)
..+|.++|+++ |++++.|-.-+
T Consensus 82 A~~I~e~A~e~-gVPi~e~~~LA 103 (144)
T 2jlj_A 82 VQTVRKIAEEE-GVPILQRIPLA 103 (144)
T ss_dssp HHHHHHHHHHH-TCCEEECHHHH
T ss_pred HHHHHHHHHHc-CCCEEeCHHHH
Confidence 67899999999 99999997544
No 440
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=20.82 E-value=43 Score=28.28 Aligned_cols=56 Identities=9% Similarity=-0.018 Sum_probs=37.3
Q ss_pred CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC------CHHHHHhhcC--CCCcEEEEecCC
Q psy12791 96 AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR------KIENLIKYIK--PNTKMVWIENPT 153 (393)
Q Consensus 96 ~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~------d~~~l~~~l~--~~~~~v~l~~p~ 153 (393)
.|.+|+++.|.-.+ ..+...++..|++++.+|+- +.+.+.+.+. .+...|+++++|
T Consensus 5 ~g~~vlvtRp~~~~--~~l~~~L~~~G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~~ 68 (254)
T 4es6_A 5 SGWRLLLTRPDEEC--AALAASLGEAGVHSSSLPLLAIDPLEETPEQRTLMLDLDRYCAVVVVSKP 68 (254)
T ss_dssp -CCEEEECSCHHHH--HHHHHHHHHTTCEEEECCSCEEEECCCCHHHHHHHHTGGGCSEEEECSHH
T ss_pred CCCEEEEeCChHHh--HHHHHHHHHCCCcEEEeCCEEEeeCcChHHHHHHHHhccCCCEEEEECHH
Confidence 37899999986543 24667778899999998873 3334444332 246778877777
No 441
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=20.72 E-value=97 Score=26.29 Aligned_cols=64 Identities=11% Similarity=0.107 Sum_probs=37.6
Q ss_pred cEEEeccHHHHH-HHH-HHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC--CHHHHHhhc
Q psy12791 76 HGLCYSSGLGAV-TAV-THLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR--KIENLIKYI 140 (393)
Q Consensus 76 ~~i~~~~G~~al-~~~-~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~--d~~~l~~~l 140 (393)
..+++|.|+..| .++ ..+.+.|-+|++.+..-.. .......++..|.++..+..| |.+++++.+
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~-~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~ 75 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDR-LNQIVQELRGMGKEVLGVKADVSKKKDVEEFV 75 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHH-HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 467778888888 544 4677888888876543221 111222334556666665554 666666554
No 442
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=20.69 E-value=2.1e+02 Score=24.85 Aligned_cols=65 Identities=14% Similarity=0.021 Sum_probs=34.9
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccC----CcEEEeeCCCCHHHHHhhcC
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKI----GLEVDFVDLRKIENLIKYIK 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~----g~~v~~~~~~d~~~l~~~l~ 141 (393)
..+++|+|+..| . +...+++.|-.|++..-.-...- .....+... .+.++..++.|.+++.+.++
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 79 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSID-KALATLEAEGSGPEVMGVQLDVASREGFKMAAD 79 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHH
Confidence 367777777777 4 44567788888877644322111 111111112 23445556667776666553
No 443
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=20.66 E-value=2.3e+02 Score=24.40 Aligned_cols=67 Identities=16% Similarity=0.176 Sum_probs=38.7
Q ss_pred CCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCC-------CHHHHHhhcCC-CCcEEEEecCCCCcccccCHHHHHH
Q psy12791 96 AGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLR-------KIENLIKYIKP-NTKMVWIENPTNPLMTVFDVKAISA 167 (393)
Q Consensus 96 ~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~-------d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~ 167 (393)
++..+++..+.|. | .++.+|++...+... ++.++.+.+++ +.++||.+.-.++. -...
T Consensus 189 ~~~~~v~~H~af~-----Y--f~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~-------~~~~ 254 (291)
T 1pq4_A 189 PQRKFIVFHPSWA-----Y--FARDYNLVQIPIEVEGQEPSAQELKQLIDTAKENNLTMVFGETQFSTK-------SSEA 254 (291)
T ss_dssp SCCEEEESSCCCH-----H--HHHHTTCEEEESCBTTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCCH-------HHHH
T ss_pred CCCEEEEECCchH-----H--HHHHCCCEEeecccCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChH-------HHHH
Confidence 4778899888875 2 367889987765321 34444444443 46777765444332 2233
Q ss_pred HHHhCCCcEE
Q psy12791 168 VVKQHPDILL 177 (393)
Q Consensus 168 l~~~~~~~~l 177 (393)
++++. |+.+
T Consensus 255 ia~~~-g~~v 263 (291)
T 1pq4_A 255 IAAEI-GAGV 263 (291)
T ss_dssp HHHHH-TCEE
T ss_pred HHHHc-CCeE
Confidence 56666 5544
No 444
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=20.61 E-value=3.4e+02 Score=24.02 Aligned_cols=76 Identities=16% Similarity=0.145 Sum_probs=40.6
Q ss_pred EEEeccHHHHH--HHHHHhc-CCCCeEEEcCCCccch--------HHHHHHhccc-------CC---cEEEeeCCCCHHH
Q psy12791 77 GLCYSSGLGAV--TAVTHLL-SAGDHIISGDDVYGGT--------YRYFAQVAPK-------IG---LEVDFVDLRKIEN 135 (393)
Q Consensus 77 ~i~~~~G~~al--~~~~~~~-~~gd~vl~~~~~y~~~--------~~~~~~~~~~-------~g---~~v~~~~~~d~~~ 135 (393)
.+++|.|+.-| .++..++ +.|..|++.+..-... .......++. .+ ++++..++.|.+.
T Consensus 4 ~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~ 83 (397)
T 1gy8_A 4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF 83 (397)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHH
Confidence 46666666556 4445667 7787776543211110 1112111111 13 6677777778888
Q ss_pred HHhhcC--CCCcEEEEecC
Q psy12791 136 LIKYIK--PNTKMVWIENP 152 (393)
Q Consensus 136 l~~~l~--~~~~~v~l~~p 152 (393)
+.+.+. .+..+|+-+..
T Consensus 84 ~~~~~~~~~~~d~vih~A~ 102 (397)
T 1gy8_A 84 LNGVFTRHGPIDAVVHMCA 102 (397)
T ss_dssp HHHHHHHSCCCCEEEECCC
T ss_pred HHHHHHhcCCCCEEEECCC
Confidence 887775 33667665543
No 445
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=20.51 E-value=1.5e+02 Score=24.88 Aligned_cols=76 Identities=11% Similarity=0.038 Sum_probs=39.7
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|+|+..| .. ...+++.|..|++.+..-.. .......++..| +.+...++.|.+++.+.++ .+..
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 110 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHG-LEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVS 110 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHH-HHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCc
Confidence 467777777777 44 45667778887765432211 111111122234 3444455557666665543 2456
Q ss_pred EEEEecC
Q psy12791 146 MVWIENP 152 (393)
Q Consensus 146 ~v~l~~p 152 (393)
+|+-+..
T Consensus 111 ~li~~Ag 117 (272)
T 1yb1_A 111 ILVNNAG 117 (272)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665443
No 446
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=20.50 E-value=2.7e+02 Score=24.15 Aligned_cols=63 Identities=19% Similarity=0.063 Sum_probs=40.2
Q ss_pred EEEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcCCCCcEEEEec
Q psy12791 77 GLCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIKPNTKMVWIEN 151 (393)
Q Consensus 77 ~i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~~~~~~v~l~~ 151 (393)
.|++|+|+.-+ .++..+++.|..|++.+-.-. ..+++++..++.|.+.+.+.+. +..+|+-+.
T Consensus 21 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-~~d~vih~A 85 (347)
T 4id9_A 21 MILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS-----------GTGGEEVVGSLEDGQALSDAIM-GVSAVLHLG 85 (347)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC-----------SSCCSEEESCTTCHHHHHHHHT-TCSEEEECC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC-----------CCCccEEecCcCCHHHHHHHHh-CCCEEEECC
Confidence 46776666556 444566777877765432211 1466777778889998888886 566666543
No 447
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=20.39 E-value=1.7e+02 Score=24.06 Aligned_cols=75 Identities=8% Similarity=0.052 Sum_probs=39.7
Q ss_pred cEEEeccHHHHH--HHHHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCCCCHHHHHhhcC------CCCc
Q psy12791 76 HGLCYSSGLGAV--TAVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDLRKIENLIKYIK------PNTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al--~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l~------~~~~ 145 (393)
..+++|.|+..+ .++..+++.|-+|++....-.. .......++..+ +..+..++.|.+++++.++ .+..
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 90 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADA-ANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVD 90 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 467788777777 4445677888877765432211 111111122233 3344455557777766553 1456
Q ss_pred EEEEec
Q psy12791 146 MVWIEN 151 (393)
Q Consensus 146 ~v~l~~ 151 (393)
+|+.+.
T Consensus 91 ~vi~~A 96 (255)
T 1fmc_A 91 ILVNNA 96 (255)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 448
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=20.33 E-value=2e+02 Score=24.21 Aligned_cols=71 Identities=18% Similarity=0.148 Sum_probs=40.6
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCC--cEEEeeCCCCHHHHHhhcCC------CCc
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIG--LEVDFVDLRKIENLIKYIKP------NTK 145 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g--~~v~~~~~~d~~~l~~~l~~------~~~ 145 (393)
..+++|.|+..| .. ...+++.|-+|++.+..-.. .....+..+ +.....++.|.+++.+.++. +..
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 87 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETD----LAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLD 87 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSC----HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHH----HHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788888887 44 45677888888776544332 222222223 44555566677766665541 455
Q ss_pred EEEEe
Q psy12791 146 MVWIE 150 (393)
Q Consensus 146 ~v~l~ 150 (393)
+++-+
T Consensus 88 ~lv~n 92 (271)
T 3tzq_B 88 IVDNN 92 (271)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 55544
No 449
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=20.21 E-value=2e+02 Score=24.55 Aligned_cols=71 Identities=14% Similarity=0.146 Sum_probs=42.6
Q ss_pred CCccchHHHHHHhcccCCcEEEeeCCC-CH----HHHHhhcCCCCcEEEEecCCCCcccccCHHHHHHHHHhCCCcEEE-
Q psy12791 105 DVYGGTYRYFAQVAPKIGLEVDFVDLR-KI----ENLIKYIKPNTKMVWIENPTNPLMTVFDVKAISAVVKQHPDILLV- 178 (393)
Q Consensus 105 ~~y~~~~~~~~~~~~~~g~~v~~~~~~-d~----~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~li- 178 (393)
|.|......+...++..|.++...... |. +.++..+..+...|++.... +. ...+..+.+++. ++++|
T Consensus 15 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~-~~----~~~~~~~~~~~~-~iPvV~ 88 (313)
T 3m9w_A 15 ERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYN-GQ----VLSNVVKEAKQE-GIKVLA 88 (313)
T ss_dssp STTHHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSS-TT----SCHHHHHHHHTT-TCEEEE
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCC-hh----hhHHHHHHHHHC-CCeEEE
Confidence 445544555677788889988877654 33 33444555678888875443 22 124455666667 77655
Q ss_pred EeC
Q psy12791 179 LDN 181 (393)
Q Consensus 179 vDe 181 (393)
+|.
T Consensus 89 ~~~ 91 (313)
T 3m9w_A 89 YDR 91 (313)
T ss_dssp ESS
T ss_pred ECC
Confidence 444
No 450
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=20.03 E-value=1.6e+02 Score=24.97 Aligned_cols=75 Identities=9% Similarity=-0.003 Sum_probs=38.8
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcc-cCCcEE--EeeCCCC----HHHHHhhcC-----
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAP-KIGLEV--DFVDLRK----IENLIKYIK----- 141 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~-~~g~~v--~~~~~~d----~~~l~~~l~----- 141 (393)
..+++|.|+..| .. ...+++.|-+|++....-..........++ ..|.++ ...++.| .+++.+.++
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~ 103 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA 103 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence 467888888787 44 455677787777654332011111111111 234344 4445557 777666553
Q ss_pred -CCCcEEEEe
Q psy12791 142 -PNTKMVWIE 150 (393)
Q Consensus 142 -~~~~~v~l~ 150 (393)
.+..+++-+
T Consensus 104 ~g~iD~lvnn 113 (288)
T 2x9g_A 104 FGRCDVLVNN 113 (288)
T ss_dssp HSCCCEEEEC
T ss_pred cCCCCEEEEC
Confidence 145565544
No 451
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=20.01 E-value=3e+02 Score=22.54 Aligned_cols=72 Identities=10% Similarity=0.194 Sum_probs=40.9
Q ss_pred cEEEeccHHHHH-H-HHHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEEEeeCCCCHHHHHhhcC--CCCcEEEEec
Q psy12791 76 HGLCYSSGLGAV-T-AVTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEVDFVDLRKIENLIKYIK--PNTKMVWIEN 151 (393)
Q Consensus 76 ~~i~~~~G~~al-~-~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v~~~~~~d~~~l~~~l~--~~~~~v~l~~ 151 (393)
..+++|.|+..| . +...+++.|.+|++.+..-. ......+..++.....++.|.+++++... .+..+++-+.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~A 82 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINES----KLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVA 82 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECC
Confidence 467888888787 4 44567778888876543211 12222221245566666667777765443 2456666543
No 452
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=20.01 E-value=2.9e+02 Score=23.10 Aligned_cols=75 Identities=15% Similarity=0.119 Sum_probs=39.1
Q ss_pred cEEEeccHHHHH-HH-HHHhcCCCCeEEEcCCCccchHHHHHHhcccCCcEE--EeeCCCCHHHHHhhcC-------CCC
Q psy12791 76 HGLCYSSGLGAV-TA-VTHLLSAGDHIISGDDVYGGTYRYFAQVAPKIGLEV--DFVDLRKIENLIKYIK-------PNT 144 (393)
Q Consensus 76 ~~i~~~~G~~al-~~-~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~v--~~~~~~d~~~l~~~l~-------~~~ 144 (393)
..+++|.|+..| .. ...+++.|-+|++....-.. .......++..|.++ ...++.|.+++.+.++ .+.
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 100 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKE-LDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKL 100 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-HHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCC
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777777 44 45677788887765432211 111111122234444 4445557766665542 345
Q ss_pred cEEEEec
Q psy12791 145 KMVWIEN 151 (393)
Q Consensus 145 ~~v~l~~ 151 (393)
.+++-+.
T Consensus 101 d~lv~nA 107 (273)
T 1ae1_A 101 NILVNNA 107 (273)
T ss_dssp CEEEECC
T ss_pred cEEEECC
Confidence 6665443
Done!