RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy12792
(570 letters)
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 75.3 bits (184), Expect = 2e-14
Identities = 54/374 (14%), Positives = 118/374 (31%), Gaps = 114/374 (30%)
Query: 268 HDFLKSPYFDDIGVK-TLNYLDSIFQWDNLEKSKFYKGLPQIMEKLPHRIN-TNRILPCL 325
F + D+ K + SI + I+ ++ T R+ L
Sbjct: 23 SVFED-AFVDNFDCKDVQDMPKSIL------SKEEID---HII-MSKDAVSGTLRLFWTL 71
Query: 326 M-------KEFINSSMVP---FV------------LPNVLYIAE----QCSQQEFTRDVL 359
+ ++F+ + F+ + +YI + Q F + +
Sbjct: 72 LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131
Query: 360 PHLIPVMKLQEPIQVL----LIFMQKM----------EVLLKLTPPEQVKSEV--LPL-L 402
L P +KL++ + L + + + +V L ++ ++ L L
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN 191
Query: 403 YRALESDSQQIQELCLSILPSLANLIE----YPAMKNALLPRIKRLCISTSHISVRVNCL 458
+ E+ + +Q+L I P+ + + +++ ++RL S + NCL
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY----ENCL 247
Query: 459 VCLGKLIEYLDKWLVLDEVL------PFLPQ----IPSRDPAVL--MGILGIYKLVLNHK 506
LVL V F + +R V + + L+H
Sbjct: 248 -------------LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 507 KMAI----SKEIMATKI------LPFLM----PLVIENSLSLNQFNSLV-AVIKDMVNRV 551
M + K ++ + LP + P + S++ I+D +
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRL----------SIIAESIRDGLATW 344
Query: 552 EAEHRTKLEQLNSI 565
+ ++L +I
Sbjct: 345 DNWKHVNCDKLTTI 358
Score = 54.1 bits (129), Expect = 1e-07
Identities = 75/512 (14%), Positives = 154/512 (30%), Gaps = 153/512 (29%)
Query: 109 ESSLANVLGHTE-----NLPNPLPPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHH 163
+ ++L E + + + +L+ + V + F+ + +I++
Sbjct: 39 QDMPKSILSKEEIDHIIMSKDAV---SGTLRLFWTLLSKQEEMVQK---FV-EEVLRINY 91
Query: 164 NLCPHNIIVSHHGAW---KIFGFDFSRELCLDPTRQLTPARDMFSLGATICAVYNNGKSI 220
+ I + P+ M+ +YN+ +
Sbjct: 92 K-------------FLMSPI------KTEQRQPSMM----TRMYI--EQRDRLYNDNQVF 126
Query: 221 ISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFL-------KS 273
+ N++ RL + LR+ + ELRP + + K+
Sbjct: 127 --AKYNVS------------RLQPYLK-LRQALL-------ELRPAKNVLIDGVLGSGKT 164
Query: 274 ----PYFDDIGVKTLNYLDSIFQWDNLEKSKFYKGLPQIMEKLPHRINTNRILPCL---- 325
V+ IF W NL+ + + ++++KL ++I+ N
Sbjct: 165 WVALDVCLSYKVQCKMD-FKIF-WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222
Query: 326 -------MKEFINSSMVPFVLPNVLYI------AE-------QCSQQEFTRDVLPHLIPV 365
++ + + N L + A+ C TR +
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFK--QVTDF 280
Query: 366 MKLQEPIQVLLIFMQKMEVLLKLTPPEQVKSEVLPLLYRALESDSQQIQELCLSILPSLA 425
+ + L LTP E V LL + L+ Q + L+ P
Sbjct: 281 LSAATTTHISLDHHSMT-----LTPDE-----VKSLLLKYLDCRPQDLPREVLTTNPRRL 330
Query: 426 NLI-----EYPAM-KNALLPRIKRLCISTSHISVRVNCLVCLGKLIEYLDKWLVLDE--- 476
++I + A N +L T+ I +N L + + D+ V
Sbjct: 331 SIIAESIRDGLATWDNWKHVNCDKL---TTIIESSLNVLEP-AEYRKMFDRLSVFPPSAH 386
Query: 477 ----VLPFL-PQIPSRDPAVLMGILGIYKLVLNHKKMAISKEIMATKILPFLMPLVIENS 531
+L + + D V++ L Y LV K E++
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPK---------------------EST 425
Query: 532 LSLNQFNSLVAVIKDMVNRVEAEHRTKLEQLN 563
+S+ S+ +K + A HR+ ++ N
Sbjct: 426 ISI---PSIYLELKVKLENEYALHRSIVDHYN 454
Score = 44.1 bits (103), Expect = 1e-04
Identities = 47/309 (15%), Positives = 97/309 (31%), Gaps = 88/309 (28%)
Query: 15 VNQISSVLPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLD 74
++ I+ + T + WK + K +T ++S+ LE +
Sbjct: 330 LSIIAESIRDGLATWDN--------------WKHVNCDKLTTIIESSL-----NVLEPAE 370
Query: 75 MKLREEYFTF------VKRGVSQLTRL-----RHPQILIVQHPLEESSLANVLGHTENLP 123
R+ + L+ + + +++V L + SL
Sbjct: 371 Y--RKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK-LHKYSLVE--KQ----- 420
Query: 124 NPLPPHLRSYKLYDIEIKYGLMQVGEGLNFLHN---DAKKIHHNLCPHNII--------- 171
P + + I ++ +++ E LH D I ++I
Sbjct: 421 ----PKESTISIPSIYLEL-KVKL-ENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY 474
Query: 172 --VSHH--GAWKIFGFDFSRELCLDPTRQLTPARDMFS-LGATICAV---YNNGKSIISS 223
+ HH R + LD F L I +N SI+++
Sbjct: 475 SHIGHHLKNIEHPERMTLFRMVFLD-----------FRFLEQKIRHDSTAWNASGSILNT 523
Query: 224 DQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYFDDIGVKT 283
Q + F + + D D LV +L+ P++ + + S Y D + +
Sbjct: 524 LQQLKFYK--------PYICDNDPKYERLVNAILDFLPKI---EENLICSKYTDLLRIAL 572
Query: 284 LNYLDSIFQ 292
+ ++IF+
Sbjct: 573 MAEDEAIFE 581
Score = 37.1 bits (85), Expect = 0.015
Identities = 41/256 (16%), Positives = 82/256 (32%), Gaps = 67/256 (26%)
Query: 348 QCSQQEFT-RDVLPHLIPVMK--------LQEPIQVLL------IFMQKMEV-------- 384
+ + ++ +D+L P +L I M K V
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69
Query: 385 LLKLTPPEQVK---SEVLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNALLPRI 441
L E V+ EVL + Y+ L S I+ PS+ Y ++
Sbjct: 70 TLLSKQEEMVQKFVEEVLRINYKFLMS---PIKTEQRQ--PSM-MTRMYIEQRD------ 117
Query: 442 KRLCISTSHISVRVNCLVCLGKLIEYLDKWLVLDEVLPFLPQIPSRDPAVLMGILGIYKL 501
RL + + + + N V + L + L+ + ++ G+LG K
Sbjct: 118 -RLY-NDNQVFAKYN--VSRLQPYLKLRQALLELRPAKNV---------LIDGVLGSGKT 164
Query: 502 VL------NHKK----------MAISKEIMATKILPFLMPLVIENSLSLNQFNSLVAVIK 545
+ ++K + + +L L L+ + + + + IK
Sbjct: 165 WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK 224
Query: 546 DMVNRVEAEHRTKLEQ 561
++ ++AE R L+
Sbjct: 225 LRIHSIQAELRRLLKS 240
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein,
phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP:
a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A*
3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A
3c5w_A
Length = 588
Score = 65.4 bits (159), Expect = 3e-11
Identities = 28/190 (14%), Positives = 72/190 (37%), Gaps = 7/190 (3%)
Query: 338 VLPNVLYIAEQCSQQEFTRDVLPHLIPVMKLQEPIQVLLIFMQKMEVLLKLTPPEQVKSE 397
++ N+ + E ++ ++ +LP ++ + + + +V L ++ M +L E +
Sbjct: 383 IISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKW-RVRLAIIEYMPLLAGQLGVEFFDEK 441
Query: 398 VLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNALLPRIKRLCISTSHISVRVNC 457
+ L L I+E S L L ++P++ + +++ R+
Sbjct: 442 LNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYL-HRMTT 500
Query: 458 LVCLGKLIEYLDKWLVLDEVLPFLPQ-IPSRDPAVLMGILGIYKLVLNHKKMAISKEIMA 516
L C+ L E + + +LP + + V + + + + +
Sbjct: 501 LFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPI----LDNSTLQ 556
Query: 517 TKILPFLMPL 526
+++ P L L
Sbjct: 557 SEVKPILEKL 566
Score = 60.0 bits (145), Expect = 1e-09
Identities = 30/224 (13%), Positives = 74/224 (33%), Gaps = 2/224 (0%)
Query: 305 LPQIMEKLPHRINTNRILPCLMKEFINSSMVPFVLPNVLYIAEQCSQQEFTRDVLPHLIP 364
L I + +P + + L+ + L
Sbjct: 111 LRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFR 170
Query: 365 VMKLQEPIQVLLIFMQKMEVLLKLTPPEQVKSEVLPLLYRALESDSQQIQELCLSILPSL 424
+ + V K+ K+ + VKSE++P+ + ++ L + ++
Sbjct: 171 NLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNI 230
Query: 425 ANLIEYPAMKNALLPRIKRLCISTSHISVRVNCLVCLGKLIEYLDKWLVLDEVLP-FLPQ 483
A L+ ++ ++P +++ S VR +L + + + +++P F
Sbjct: 231 AQLLPQEDLEALVMPTLRQAAEDKS-WRVRYMVADKFTELQKAVGPEITKTDLVPAFQNL 289
Query: 484 IPSRDPAVLMGILGIYKLVLNHKKMAISKEIMATKILPFLMPLV 527
+ + V K + + ++ ++ILP + LV
Sbjct: 290 MKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELV 333
Score = 44.2 bits (104), Expect = 1e-04
Identities = 18/162 (11%), Positives = 57/162 (35%), Gaps = 4/162 (2%)
Query: 305 LPQIMEKLPHRINTNRILPCLMKEFINSSMV--PFVLPNVLYIAEQCSQQEFTRDVLPHL 362
+P + +L ++ M ++ N+ + E+ ++ ++P +
Sbjct: 426 MPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKV 485
Query: 363 IPVMKLQEPIQVLLIFMQKMEVLLKLTPPEQVKSEVLPLLYRALESDSQQIQELCLSILP 422
+ M + + + VL ++ + +LP + R ++ L
Sbjct: 486 L-AMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQ 544
Query: 423 SLANLIEYPAMKNALLPRIKRLCISTSHISVRVNCLVCLGKL 464
+ +++ +++ + P +++L + V+ L L
Sbjct: 545 KIGPILDNSTLQSEVKPILEKLTQDQD-VDVKYFAQEALTVL 585
Score = 35.8 bits (82), Expect = 0.040
Identities = 24/157 (15%), Positives = 51/157 (32%), Gaps = 26/157 (16%)
Query: 294 DNLEKSKFYKGLPQIMEKL------PHRINTNRILPCLMKEFINSSMVPFVLPNVL---- 343
L F + L + R L L+++F ++P VL
Sbjct: 431 GQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSG 490
Query: 344 ---------------YIAEQCSQQEFTRDVLPHLIPVMKLQEPIQVLLIFMQKMEVLLKL 388
++E C Q T+ +LP ++ + V + ++ + +
Sbjct: 491 DPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVA-NVRFNVAKSLQKIGPI 549
Query: 389 TPPEQVKSEVLPLLYRALESDSQQIQELCLSILPSLA 425
++SEV P+L + + ++ L L+
Sbjct: 550 LDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVLS 586
Score = 33.1 bits (75), Expect = 0.29
Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Query: 399 LPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNALLPRIKRLCISTSHISVRVNCL 458
+ +L L ++ Q++ + L ++A + ++ LLP + V +
Sbjct: 12 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDE--VLLALA 69
Query: 459 VCLGKLIEYLDKWLVLDEVLPFL 481
LG + + +LP L
Sbjct: 70 EQLGTFTTLVGGPEYVHCLLPPL 92
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 63.1 bits (153), Expect = 8e-11
Identities = 38/300 (12%), Positives = 81/300 (27%), Gaps = 55/300 (18%)
Query: 28 TREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDM--KLREEYFT-- 83
R+ + + + ++ +D ++ V +L E F
Sbjct: 61 ERKLKLVEPLRVGDRS---VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAA 117
Query: 84 -FVKRGVSQLTR-------------LRHPQILIVQHPLEESSLANVL-------GHTENL 122
+ + P + ++ ++AN L E L
Sbjct: 118 RLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELL 177
Query: 123 PNPLPPHLRSYKLYDIEIKYGLM-QVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIF 181
+ L I + L Q+ L +H + P N+ + G +
Sbjct: 178 FSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ-SKGLVHGHFTPDNLFIMPDGRLMLG 236
Query: 182 GFDFSR------------------ELCLDPTRQLTPARDMFSLGATI----CAVY---NN 216
E T T A + + LG +I C
Sbjct: 237 DVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV 296
Query: 217 GKSIISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYF 276
I S + + G+ ++ + + + ++ L+ LN R + +++P F
Sbjct: 297 TPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEF 356
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 54.4 bits (131), Expect = 5e-08
Identities = 50/237 (21%), Positives = 81/237 (34%), Gaps = 42/237 (17%)
Query: 131 RSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSH---HGAWKIFGFDF-- 185
+ + +E L Q GL LH +H +L PHNI++S HG K DF
Sbjct: 111 KDFAHLGLEPITLLQQTTSGLAHLH-SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169
Query: 186 SRE-------------------------LCLDPTRQLTPARDMFSLGATICAVYNNGK-- 218
++ L D T D+FS G V + G
Sbjct: 170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
Query: 219 --SIISSDQNITFSELGSANINS-ARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPY 275
+ NI LG+ +++ D REL++ M+ P+ RP LK P+
Sbjct: 230 FGKSLQRQANI---LLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPF 286
Query: 276 FDDIGVKTLNYLDSIFQWDNLEKSKFYKGLPQIMEKLPHRINTNRILPCLMKEFINS 332
F + K L + + D +EK + + +E+ + +
Sbjct: 287 FWSLE-KQLQFFQDVS--DRIEKESLDGPIVKQLERGGRAVVKMDWRENITVPLQTD 340
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 53.5 bits (129), Expect = 7e-08
Identities = 35/164 (21%), Positives = 54/164 (32%), Gaps = 38/164 (23%)
Query: 139 EIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FGF-------DFSREL 189
++ L L LH +H ++ P NI + G K+ FG
Sbjct: 158 QVWGYLRDTLLALAHLH-SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ 216
Query: 190 CLDP--------TRQLTPARDMFSLGATI----CA--VYNNGKSIISSDQNITFSELGSA 235
DP A D+FSLG TI C + + G+ +L
Sbjct: 217 EGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGW---------QQLRQG 267
Query: 236 NINSARLSDIDEGLRELVKMMLNTSPELRPD-----NHDFLKSP 274
+ + + LR ++ MML P+LR L+ P
Sbjct: 268 YLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQP 311
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 52.7 bits (127), Expect = 9e-08
Identities = 45/298 (15%), Positives = 90/298 (30%), Gaps = 87/298 (29%)
Query: 29 REYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRG 88
++ IGS G G +++ R + +V+++ + K E
Sbjct: 11 MDFKEIELIGSGGFG---QVFKAKHRIDGK---TYVIKRVKYNN--EKAERE-------- 54
Query: 89 VSQLTRLRHPQILIVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDI---------- 138
V L +L H I+ + + + ++ L+
Sbjct: 55 VKALAKLDHVNIVHYNGCWDGFD------YDPETSSKNSSRSKTKCLFIQMEFCDKGTLE 108
Query: 139 --------------EIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FG 182
Q+ +G++++H K I+ +L P NI + KI FG
Sbjct: 109 QWIEKRRGEKLDKVLALELFEQITKGVDYIH-SKKLINRDLKPSNIFLVDTKQVKIGDFG 167
Query: 183 FDFSRELCLDPTRQL---TP---------------ARDMFSLG------ATICAVYNNGK 218
L D R T D+++LG +C
Sbjct: 168 L--VTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS 225
Query: 219 SIISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYF 276
+ ++ S D+ + L++ +L+ PE RP+ + L++
Sbjct: 226 KFFTDLRDGIIS------------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTV 271
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 50.6 bits (122), Expect = 6e-07
Identities = 46/257 (17%), Positives = 82/257 (31%), Gaps = 80/257 (31%)
Query: 87 RGVSQLTRLRHPQIL----IVQHPLEESSL--------ANVLGHTENLPNPLPPHLRSYK 134
R + L +L+HP ++ + + + L VL + +P H
Sbjct: 51 REIRMLKQLKHPNLVNLLEVFRR---KRRLHLVFEYCDHTVLHELDRYQRGVPEH----- 102
Query: 135 LYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPT 194
+K Q + +NF H IH ++ P NI+++ H K+ F F+R L P+
Sbjct: 103 ----LVKSITWQTLQAVNFCH-KHNCIHRDVKPENILITKHSVIKLCDFGFARLLT-GPS 156
Query: 195 RQLT---------------------PARDMFSLGATICAVYNN-----GKSIISSDQ--- 225
P D++++G + + GKS + DQ
Sbjct: 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV--DQLYL 214
Query: 226 -----------------------NITFSELGSANINSARLSDIDEGLRELVKMMLNTSPE 262
+ + + +I L+K L+ P
Sbjct: 215 IRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPT 274
Query: 263 LRPDNHDFLKSPYFDDI 279
R L PYF++I
Sbjct: 275 ERLTCEQLLHHPYFENI 291
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 50.0 bits (120), Expect = 7e-07
Identities = 39/212 (18%), Positives = 64/212 (30%), Gaps = 73/212 (34%)
Query: 111 SLANVLGHTENLPNPLP-PHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHN 169
SLA+ + + + L+ L+QVG GL ++H +H ++ P N
Sbjct: 97 SLADAISENYRIMSYFKEAELKDL----------LLQVGRGLRYIH-SMSLVHMDIKPSN 145
Query: 170 IIVSHHGAWKIFGF-----------------DF-------------------SRELCLDP 193
I +S D + E+ +
Sbjct: 146 IFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQEN 205
Query: 194 TRQLTPARDMFSLGATI---CA---VYNNGKSIISSDQNITFSELGSANINSARLSDIDE 247
L A D+F+L T+ + NG I RL I +
Sbjct: 206 YTHLPKA-DIFALALTVVCAAGAEPLPRNGDQW--------------HEIRQGRLPRIPQ 250
Query: 248 G----LRELVKMMLNTSPELRPDNHDFLKSPY 275
EL+K+M++ PE RP +K
Sbjct: 251 VLSQEFTELLKVMIHPDPERRPSAMALVKHSV 282
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 49.9 bits (120), Expect = 9e-07
Identities = 49/258 (18%), Positives = 82/258 (31%), Gaps = 80/258 (31%)
Query: 87 RGVSQLTRLRHPQIL----IVQHPLEESSL--------ANVLGHTENLPNPLPPHLRSYK 134
R + L +LRH ++ + + + +L E PN L
Sbjct: 73 REIKLLKQLRHENLVNLLEVCKK---KKRWYLVFEFVDHTILDDLELFPNGLDYQ----- 124
Query: 135 LYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPT 194
++ L Q+ G+ F H IH ++ P NI+VS G K+ F F+R L P
Sbjct: 125 ----VVQKYLFQIINGIGFCH-SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA-APG 178
Query: 195 RQLT---------------------PARDMFSLGATICAVYNN-----GKSIISSDQ--- 225
A D++++G + ++ G S I DQ
Sbjct: 179 EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI--DQLYH 236
Query: 226 -----------------------NITFSELGSANINSARLSDIDEGLRELVKMMLNTSPE 262
+ E+ R + E + +L K L+ P+
Sbjct: 237 IMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPD 296
Query: 263 LRPDNHDFLKSPYFDDIG 280
RP + L +F G
Sbjct: 297 KRPFCAELLHHDFFQMDG 314
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 48.1 bits (115), Expect = 3e-06
Identities = 57/298 (19%), Positives = 93/298 (31%), Gaps = 86/298 (28%)
Query: 37 IGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLR 96
IG+ G ++ D ++ +L + + + E+ R V+ + RLR
Sbjct: 45 IGAGSFG---TVHRAEWH--GSDVAVKILME---QDFHAERVNEF----LREVAIMKRLR 92
Query: 97 HPQIL-------------IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDIEIKYG 143
HP I+ IV L SL +L H L R + +
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRR------LSM--- 142
Query: 144 LMQVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKI--FGFDFSRELCLDPTRQLTPA 200
V +G+N+LHN I H NL N++V K+ FG SR
Sbjct: 143 AYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFG--LSRLKASTFL------ 194
Query: 201 RDMFSLGATIC--A--VYNNGKSIISSD-------------QNITFSELGSANI------ 237
S T A V + S SD + L A +
Sbjct: 195 -SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF 253
Query: 238 NSARL---SDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYFDDIGVKTLNYLDSIFQ 292
RL +++ + +++ P RP F I ++ L + +
Sbjct: 254 KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPS---------FATI----MDLLRPLIK 298
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 47.6 bits (114), Expect = 4e-06
Identities = 52/298 (17%), Positives = 89/298 (29%), Gaps = 91/298 (30%)
Query: 37 IGSAGQGLLWK-IYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRL 95
+ G LWK + G D + VL+ R K R+ +L
Sbjct: 18 LNENHSGELWKGRWQG------NDIVVKVLKVRDWS--TRKSRD-----FNEECPRLRIF 64
Query: 96 RHPQIL---------------IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDIEI 140
HP +L ++ H + SL NVL H E + ++
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL-H-EGTNFVVDQSQA------VKF 116
Query: 141 KYGLMQVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKIFGFDFSRE----------- 188
+ + G+ FLH I H L ++++ +I D
Sbjct: 117 ---ALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPA 173
Query: 189 ------LCLDPTRQLTPARDMFSLG------ATICAVYNNGKSIISSDQNITFSELGSA- 235
L P + DM+S T + +++ E+G
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF----------ADLSNMEIGMKV 223
Query: 236 NINSARL---SDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYFDDIGVKTLNYLDSI 290
+ R I + +L+K+ +N P RP FD I + L+ +
Sbjct: 224 ALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPK---------FDMI----VPILEKM 268
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 47.7 bits (114), Expect = 5e-06
Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 57/178 (32%)
Query: 144 LMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FGFDFSRELCLDPTRQLTPAR 201
+Q+ E + FLH +H +L P NI + K+ FG + D Q
Sbjct: 124 FLQIAEAVEFLH-SKGLMHRDLKPSNIFFTMDDVVKVGDFGL--VTAMDQDEEEQTVLTP 180
Query: 202 -------------------------------DMFSLGATICAVY---------NNGKSII 221
D+FSLG ++ +
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLG---LILFELLYPFSTQMERVRTL 237
Query: 222 SSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYFDDI 279
+ +N+ F L + +V+ ML+ SP RP+ + +++ F+D+
Sbjct: 238 TDVRNLKFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 46.9 bits (112), Expect = 8e-06
Identities = 48/296 (16%), Positives = 87/296 (29%), Gaps = 78/296 (26%)
Query: 29 REYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRG 88
+Y++ IG+ G + ++S + I V ++ + ++ +
Sbjct: 6 EDYEVLYTIGTGSYG---RCQKIRRKSDGK---ILVWKELDYGSMTEAEKQM----LVSE 55
Query: 89 VSQLTRLRHPQIL---------------IVQHPLEESSLANVLGHTENLPNPLPPHLRSY 133
V+ L L+HP I+ IV E LA+V+ L
Sbjct: 56 VNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE---- 111
Query: 134 KLYDIEIKYGLMQVGEGLNFLHNDAKK----IHHNLCPHNIIVSHHGAWKIFGFDFSR-- 187
+ + Q+ L H + +H +L P N+ + K+ F +R
Sbjct: 112 -----FVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
Query: 188 -------------------ELCLDPTRQLTPARDMFSLGATICAVYN--------NGKSI 220
E D++SLG C +Y S
Sbjct: 167 NHDTSFAKTFVGTPYYMSPEQMNR--MSYNEKSDIWSLG---CLLYELCALMPPFTAFSQ 221
Query: 221 ISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYF 276
I + + L E++ MLN RP + L++P
Sbjct: 222 KELAGKIREGKFRRIP------YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 47.7 bits (113), Expect = 1e-05
Identities = 93/496 (18%), Positives = 150/496 (30%), Gaps = 169/496 (34%)
Query: 77 LREEYFTFVKRGVSQLTRLRHPQILIVQHPLEESS----LANVLGHTENLPNPLPPHLRS 132
L+E+ F K L P E ++ + LG+ +L P
Sbjct: 33 LQEQ---FNKI-------LPEPTEGFAADD-EPTTPAELVGKFLGYVSSLVEPSKV---- 77
Query: 133 YKLYDIEIKYGLMQVGEGLNFLH-NDAKKIH---HNLCPHN--IIVSHHGAWKIFGFDFS 186
+D + L + +L ND IH L N +V K + +
Sbjct: 78 -GQFDQVLNLCLTEFEN--CYLEGND---IHALAAKLLQENDTTLVKTKELIKNY-IT-A 129
Query: 187 RELCLDPTRQLTP------ARDMFSLGATICAVYNNGKSIISSDQ-NIT--FSELGSANI 237
R + P + + + A + A++ G Q N F EL
Sbjct: 130 RIMAKRPFDKKSNSALFRAVGEG---NAQLVAIFG-G-------QGNTDDYFEEL----- 173
Query: 238 NSARLSDIDEGL-RELVKMMLNTSPELRPDNHDFLKSPYFDDIGVKTLNYLDSIFQWDNL 296
L L +L+K T EL D F L+ I +W L
Sbjct: 174 --RDLYQTYHVLVGDLIKFSAETLSELIRTTLDA--EKVFTQ-------GLN-ILEW--L 219
Query: 297 EK-----SKFYKG-----LPQI-MEKLPHRINTNRIL---PCLMKEFINSSMVPFVLPNV 342
E K Y P I + +L H + T ++L P ++ ++ + +
Sbjct: 220 ENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATG--HSQGL 277
Query: 343 L---YIAEQCSQQEFTRDVLPHLIPVMKLQEPIQVLLIFM----QKMEVLLKLTPPEQVK 395
+ IAE S + F V + +L F+ + P +
Sbjct: 278 VTAVAIAETDSWESFFVSVRKAI-----------TVLFFIGVRCYE------AYPNTSLP 320
Query: 396 SEVLPLLYRALESDSQQIQE------LCLSILPSLANLIEYPAMKNALLPRIKRLCISTS 449
+L DS + E L +S L + + +Y N+ LP K++
Sbjct: 321 PSIL--------EDSLENNEGVPSPMLSISNL-TQEQVQDYVNKTNSHLPAGKQV----- 366
Query: 450 HISVRVN---CLVCLGKLIEYLDKWLVLDEVLPFLPQIPSRDPAVLMGILGIYKLVLNHK 506
IS+ VN LV G P P L G L L +
Sbjct: 367 EISL-VNGAKNLVVSG----------------P---------PQSLYG------LNLTLR 394
Query: 507 KMAISKEIMATKILPF 522
K + ++I PF
Sbjct: 395 KAKAPSGLDQSRI-PF 409
Score = 39.3 bits (91), Expect = 0.004
Identities = 53/265 (20%), Positives = 80/265 (30%), Gaps = 67/265 (25%)
Query: 333 SMVPFVL-----------PNVLYI-AEQCSQQEFTRDVLPHLIPVMKL---QEPIQVLLI 377
S P L P + A Q Q++F + LP P EP +
Sbjct: 5 STRPLTLSHGSLEHVLLVPTASFFIASQ-LQEQFNKI-LPE--PTEGFAADDEPTTPAEL 60
Query: 378 FMQKMEVLLKLTPPEQVKS--EVLPLLYRALESD---SQQIQELCLSILPS-------LA 425
+ + + L P +V +VL L E+ I L +L
Sbjct: 61 VGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTK 120
Query: 426 NLIE--YPAMKNALLPRIKRLCISTSHISVRVNC----LVCL----GKLIEYLD------ 469
LI+ A A P K+ S S + V LV + G +Y +
Sbjct: 121 ELIKNYITARIMAKRPFDKK---SNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLY 177
Query: 470 ---KWLVLD------EVLPFLPQIPSRDPAVLMGILGIYKLVLNHKKMAISKEIMATKIL 520
LV D E L L + V L I + L + K+ + + +
Sbjct: 178 QTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEW-LENPSNTPDKDYLLS--I 234
Query: 521 PFLMPLVIENSLSLNQFNSLVAVIK 545
P PL + + Q V K
Sbjct: 235 PISCPL-----IGVIQLAHYVVTAK 254
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 46.8 bits (111), Expect = 1e-05
Identities = 34/180 (18%), Positives = 59/180 (32%), Gaps = 51/180 (28%)
Query: 139 EIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FGFDFSRELCLDPTRQ 196
+ +Q+ E + FLH +H +L P NI + K+ FG + D Q
Sbjct: 165 VCLHIFIQIAEAVEFLH-SKGLMHRDLKPSNIFFTMDDVVKVGDFGL--VTAMDQDEEEQ 221
Query: 197 LTPAR-------------------------------DMFSLG------ATICAVYNNGKS 219
D+FSLG +
Sbjct: 222 TVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR 281
Query: 220 IISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYFDDI 279
II+ +N+ F L + +V+ ML+ SP RP+ D +++ F+++
Sbjct: 282 IITDVRNLKFPLL---------FTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL 332
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 46.2 bits (110), Expect = 1e-05
Identities = 56/281 (19%), Positives = 101/281 (35%), Gaps = 59/281 (20%)
Query: 30 EYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGV 89
+Y IG G K + +V+++ + ++ K REE +R V
Sbjct: 25 KYVRLQKIGEGSFG---KAILVKSTEDGR---QYVIKEINISRMSSKEREE----SRREV 74
Query: 90 SQLTRLRHPQIL-IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDI---EIKYGLM 145
+ L ++HP I+ + E SL V+ + E L + + K +I +
Sbjct: 75 AVLANMKHPNIVQYRESFEENGSLYIVMDYCEG--GDLFKRINAQKGVLFQEDQILDWFV 132
Query: 146 QVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPTRQL------TP 199
Q+ L +H D K +H ++ NI ++ G ++ F +R L + T +L TP
Sbjct: 133 QICLALKHVH-DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL--NSTVELARACIGTP 189
Query: 200 ---------------ARDMFSLGATICAVYN--------NGKSIISSDQNITFSELGSAN 236
D+++LG C +Y S+ + I
Sbjct: 190 YYLSPEICENKPYNNKSDIWALG---CVLYELCTLKHAFEAGSMKNLVLKIISGSF---- 242
Query: 237 INSARLSD-IDEGLRELVKMMLNTSPELRPDNHDFLKSPYF 276
+S LR LV + +P RP + L+ +
Sbjct: 243 ---PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 45.8 bits (108), Expect = 3e-05
Identities = 41/274 (14%), Positives = 80/274 (29%), Gaps = 53/274 (19%)
Query: 47 KIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQILIVQHP 106
+ T+R + E +L L ++ R + ++ PQ +
Sbjct: 109 HVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRV 168
Query: 107 LEESSLANVL----------GHTENLPNPLPPHLRSYKLYDIEIKYGLM-QVGEGLNFLH 155
+ VL + + L H ++K + L QV L LH
Sbjct: 169 RLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH 228
Query: 156 NDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRE-----------LCLDP----------- 193
+H L P +I++ G + GF+ P
Sbjct: 229 -HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFG 287
Query: 194 ---TRQLTPARDMFSLGATI-CAVYN----NGKSIISSDQNITFSELGSANINSARLSDI 245
+T A D ++LG I + + + I +I
Sbjct: 288 QHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI-----------FRSCKNI 336
Query: 246 DEGLRELVKMMLNTSPELRPDNHDFLKSPYFDDI 279
+ +R L++ L E R +++P ++ +
Sbjct: 337 PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 45.4 bits (108), Expect = 3e-05
Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 35/167 (20%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G+G + T R T + + L + E L+E V + L HP +
Sbjct: 19 GKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKE---------VKVMRCLEHPNV 69
Query: 101 L----IVQHP---------LEESSLANVLGHTENLPNPLPPHLRSYKLYDIEIKYGLMQV 147
L ++ ++ +L ++ + + + P R DI
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGII-KSMD--SQYPWSQRVSFAKDI--------- 117
Query: 148 GEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPT 194
G+ +LH IH +L HN +V + + F +R + + T
Sbjct: 118 ASGMAYLH-SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT 163
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 44.9 bits (107), Expect = 4e-05
Identities = 54/279 (19%), Positives = 92/279 (32%), Gaps = 81/279 (29%)
Query: 87 RGVSQLTRLRHPQIL----IVQHPLEESSLANVL--------GHTENLPNPLPPHLRSYK 134
R VS L L+H I+ I+ E SL V + ++ N + H
Sbjct: 49 REVSLLKDLKHANIVTLHDIIHT---EKSLTLVFEYLDKDLKQYLDDCGNIINMH----- 100
Query: 135 LYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPT 194
+K L Q+ GL + H K +H +L P N++++ G K+ F +R PT
Sbjct: 101 ----NVKLFLFQLLRGLAYCH-RQKVLHRDLKPQNLLINERGELKLADFGLARAKS-IPT 154
Query: 195 RQLT---------------------PARDMFSLGATICAVYNN-----GKSIISSDQ-NI 227
+ DM+ +G + G ++ +Q +
Sbjct: 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE--EQLHF 212
Query: 228 TFSELGS------------------------ANINSARLSDIDEGLRELVKMMLNTSPEL 263
F LG+ A + +D +L+ +L
Sbjct: 213 IFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRN 272
Query: 264 RPDNHDFLKSPYFDDIGVKTLNYLD--SIFQWDNLEKSK 300
R D +K P+F +G + D SIF ++ K
Sbjct: 273 RISAEDAMKHPFFLSLGERIHKLPDTTSIFALKEIQLQK 311
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 43.9 bits (104), Expect = 8e-05
Identities = 45/309 (14%), Positives = 93/309 (30%), Gaps = 86/309 (27%)
Query: 28 TREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKR 87
+++ +G G ++ ++ +I + + EKL L E
Sbjct: 5 ASDFEEIAVLGQGAFG---QVVKARNALDSRYYAIKKIRHTE-EKLSTILSE-------- 52
Query: 88 GVSQLTRLRHPQILIVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLY----------- 136
V L L H ++ N P+ + L+
Sbjct: 53 -VMLLASLNHQYVV---------RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL 102
Query: 137 -DIEIKYGLM-----------QVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FG 182
D+ L Q+ E L+++H+ IH +L P NI + KI FG
Sbjct: 103 YDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ-GIIHRDLKPMNIFIDESRNVKIGDFG 161
Query: 183 ----FDFSRELCLDPTRQLTPAR----------------------------DMFSLGATI 210
S ++ ++ L + DM+SLG
Sbjct: 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIF 221
Query: 211 ---CAVYNNGKSIISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDN 267
++ G ++ + + S + + +++++++++ P RP
Sbjct: 222 FEMIYPFSTGMERVNILKKL---RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGA 278
Query: 268 HDFLKSPYF 276
L S +
Sbjct: 279 RTLLNSGWL 287
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 43.9 bits (104), Expect = 8e-05
Identities = 58/321 (18%), Positives = 99/321 (30%), Gaps = 83/321 (25%)
Query: 30 EYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGV 89
E ++ +G G + R +D +I +E K E +
Sbjct: 9 EIEVEEVVGRGAFG---VVCKAKWR--AKDVAIKQIESESERK---AFIVE--------L 52
Query: 90 SQLTRLRHPQIL----IVQHPL-------EESSLANVLGHTENLPNPLPPHLRSYKLYDI 138
QL+R+ HP I+ +P+ E SL NVL H +
Sbjct: 53 RQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVL-HGAEPLPYYTAAHA------M 105
Query: 139 EIKYGLMQVGEGLNFLHNDAKK--IHHNLCPHNIIVSHHG-AWKIFGFDFSRELCLDPTR 195
+Q +G+ +LH+ K IH +L P N+++ G KI F + ++ T
Sbjct: 106 SW---CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN 162
Query: 196 QLTPARDMFSLGATICA--VYNNGKSIISSD-------------QNITFSELGSANI--- 237
A M A V+ D + F E+G
Sbjct: 163 NKGSAAWM--------APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM 214
Query: 238 ----NSARL---SDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYFDDIGVKTLNYLDSI 290
N R ++ + + L+ + P RP ++I VK + +L
Sbjct: 215 WAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPS---------MEEI-VKIMTHLMRY 264
Query: 291 FQWDNLEKSKFYKGLPQIMEK 311
F + + E
Sbjct: 265 FPGADEPLQYPCQHSLPPGED 285
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 44.0 bits (104), Expect = 1e-04
Identities = 44/215 (20%), Positives = 69/215 (32%), Gaps = 53/215 (24%)
Query: 134 KLYDIEIKYGLMQVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAW-------------K 179
+ L Q+ G+ LH+ KI H +L P NI+VS +
Sbjct: 111 LQKEYNPISLLRQIASGVAHLHS--LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168
Query: 180 IFGFDFSREL------------------------------CLDPTRQLTPARDMFSLGAT 209
I F ++L L R+LT + D+FS+G
Sbjct: 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 210 ICAVYNNGK----SIISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRP 265
+ + GK S + NI + + +L+ M++ P RP
Sbjct: 229 FYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP 288
Query: 266 DNHDFLKSPYFDDIGVKTLNYLDSIFQWDNLEKSK 300
L+ P F K L +L + D LE
Sbjct: 289 TAMKVLRHPLFWPKS-KKLEFLLKVS--DRLEIEN 320
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 43.7 bits (104), Expect = 1e-04
Identities = 51/257 (19%), Positives = 80/257 (31%), Gaps = 81/257 (31%)
Query: 87 RGVSQLTRLRHPQIL----IVQHPLEESSLANVL--------GHTENLPNPLPPHLRSYK 134
R +S L L HP I+ ++ E L V + L
Sbjct: 68 REISLLKELHHPNIVSLIDVIHS---ERCLTLVFEFMEKDLKKVLDENKTGLQDS----- 119
Query: 135 LYDIEIKYGLMQVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKIFGFDFSRELCLDP 193
+IK L Q+ G+ H +I H +L P N++++ GA K+ F +R P
Sbjct: 120 ----QIKIYLYQLLRGVAHCH--QHRILHRDLKPQNLLINSDGALKLADFGLARAFG-IP 172
Query: 194 TRQLT---------------------PARDMFSLGATICAVYNN-----GKSIISSDQ-N 226
R T + D++S+G + G + DQ
Sbjct: 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD--DQLP 230
Query: 227 ITFSELG------------------------SANINSARLSDIDEGLRELVKMMLNTSPE 262
FS LG S+ + + +L+ ML P
Sbjct: 231 KIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPN 290
Query: 263 LRPDNHDFLKSPYFDDI 279
R D + PYF D+
Sbjct: 291 KRISARDAMNHPYFKDL 307
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 43.3 bits (103), Expect = 1e-04
Identities = 45/255 (17%), Positives = 85/255 (33%), Gaps = 77/255 (30%)
Query: 87 RGVSQLTRLRHPQIL----IVQHP------LE--ESSLANVLGHTENLPNPLPPHLRSYK 134
R + L L+H I+ ++ E + L ++ L P
Sbjct: 50 REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF---DSCNGDLDPE----- 101
Query: 135 LYDIEIKYGLMQVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKIFGFDFSRELCLDP 193
+K L Q+ +GL F H ++ + H +L P N++++ +G K+ F +R P
Sbjct: 102 ----IVKSFLFQLLKGLGFCH--SRNVLHRDLKPQNLLINRNGELKLANFGLARAFG-IP 154
Query: 194 TRQLT---------------------PARDMFSLGATICAVYNNGKSIISSDQNI----- 227
R + + DM+S G + N G+ + +
Sbjct: 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR 214
Query: 228 TFSELGSANINS-----------------------ARLSDIDEGLRELVKMMLNTSPELR 264
F LG+ + ++ R+L++ +L +P R
Sbjct: 215 IFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQR 274
Query: 265 PDNHDFLKSPYFDDI 279
+ L+ PYF D
Sbjct: 275 ISAEEALQHPYFSDF 289
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 43.0 bits (101), Expect = 2e-04
Identities = 29/189 (15%), Positives = 63/189 (33%), Gaps = 37/189 (19%)
Query: 25 NPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFV--LEKRQLEKLDMKLREEYF 82
P Y++ IG G L + + T + ++ LE E + E
Sbjct: 21 LPEGGCYELLTVIGK-GFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGE--- 76
Query: 83 TFVKRGVSQLTRLRHPQIL-------------IVQHPLEESSLANVLGHTENLPNPLPPH 129
+ HP I+ +V + S +++ + + +
Sbjct: 77 ------LHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLI--CTHFMDGMN-- 126
Query: 130 LRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSREL 189
++ I Y L V + L+++H+ +H ++ +I++S G + G + +
Sbjct: 127 -------ELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178
Query: 190 CLDPTRQLT 198
RQ
Sbjct: 179 ISHGQRQRV 187
Score = 28.3 bits (63), Expect = 7.9
Identities = 9/39 (23%), Positives = 14/39 (35%)
Query: 249 LRELVKMMLNTSPELRPDNHDFLKSPYFDDIGVKTLNYL 287
V+ L +P+ RP L +F I + L
Sbjct: 310 FHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEAL 348
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 42.3 bits (100), Expect = 2e-04
Identities = 53/294 (18%), Positives = 100/294 (34%), Gaps = 65/294 (22%)
Query: 30 EYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGV 89
+Y++ IGS + + + +I + LEK + E + + +
Sbjct: 16 DYELQEVIGSGATA---VVQAAYCAPKKEKVAIKRIN---LEKCQTSMDE-----LLKEI 64
Query: 90 SQLTRLRHPQIL-------------IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLY 136
+++ HP I+ +V L S+ +++ H L
Sbjct: 65 QAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD----- 119
Query: 137 DIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPTRQ 196
+ I L +V EGL +LH + +IH ++ NI++ G+ +I F S L
Sbjct: 120 ESTIATILREVLEGLEYLHKN-GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 178
Query: 197 LTPAR-------------------------DMFSLGATIC---------AVYNNGKSIIS 222
R D++S G T Y K ++
Sbjct: 179 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML 238
Query: 223 SDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYF 276
+ QN L + + L + R+++ + L PE RP + L+ +F
Sbjct: 239 TLQNDP-PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFF 291
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 42.1 bits (100), Expect = 3e-04
Identities = 50/255 (19%), Positives = 81/255 (31%), Gaps = 78/255 (30%)
Query: 87 RGVSQLTRLRHPQIL----IVQHP------LE--ESSLANVLGHTENLPNPLPPHLRSYK 134
R +S L L+H I+ ++ E + L +L + L
Sbjct: 49 REISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLL---DVCEGGLESV----- 100
Query: 135 LYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPT 194
K L+Q+ G+ + H D + +H +L P N++++ G KI F +R P
Sbjct: 101 ----TAKSFLLQLLNGIAYCH-DRRVLHRDLKPQNLLINREGELKIADFGLARAFG-IPV 154
Query: 195 RQLT---------------------PARDMFSLGATICAVYNN-----GKSIISSDQ-NI 227
R+ T D++S+G + N G S DQ
Sbjct: 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA--DQLMR 212
Query: 228 TFSELG-----------------------SANINSARLSDIDEGLRELVKMMLNTSPELR 264
F LG + L +DE +L+ ML P R
Sbjct: 213 IFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQR 272
Query: 265 PDNHDFLKSPYFDDI 279
L+ YF +
Sbjct: 273 ITAKQALEHAYFKEN 287
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 42.3 bits (99), Expect = 3e-04
Identities = 42/302 (13%), Positives = 88/302 (29%), Gaps = 75/302 (24%)
Query: 37 IGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDM--KLREE-----YFTFVKRGV 89
+G T + T + + V + + +++EE +K
Sbjct: 81 LGQEDPY---AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQK 137
Query: 90 SQLTRLR------------HPQILIVQHPLEESSLANVL-------GHTENLPNPLPPHL 130
LR +++ V+ + + + + + L H
Sbjct: 138 QAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHS 197
Query: 131 RSYKLYDIEIKYGLM-QVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKIFGFDFSRE 188
++K + L QV L LH + H L P +I++ G + GF+
Sbjct: 198 STHKSLVHHARLQLTLQVIRLLASLH--HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVR 255
Query: 189 L--------------------------CLDPTRQLTPARDMFSLGATI----CAVY-NNG 217
D +T + D ++LG I CA
Sbjct: 256 DGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITK 315
Query: 218 KSIISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYFD 277
+ + + I +I + +R L++ L E R +++P ++
Sbjct: 316 DAALGGSEWIF-----------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYE 364
Query: 278 DI 279
+
Sbjct: 365 QL 366
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 41.9 bits (99), Expect = 3e-04
Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 34/169 (20%)
Query: 37 IGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLR 96
IG G G ++ G +I L E E F +R V ++ L
Sbjct: 27 IGKGGFG---LVHKGRLVKDKSVVAIKSLILGDSE--GETEMIEKFQEFQREVFIMSNLN 81
Query: 97 HPQIL----IVQHP-------LEESSLANVLGHTENLPNPLPPHLRSYKLYDIEIKYGLM 145
HP I+ ++ +P + L + L + +P+ ++ + + ++
Sbjct: 82 HPNIVKLYGLMHNPPRMVMEFVPCGDLYHRL---LDKAHPIKWSVK------LRL---ML 129
Query: 146 QVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAW-----KIFGFDFSRE 188
+ G+ ++ N I H +L NI + K+ F S++
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ 178
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 41.9 bits (99), Expect = 3e-04
Identities = 36/175 (20%), Positives = 68/175 (38%), Gaps = 41/175 (23%)
Query: 24 GNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFT 83
+P ++I G +G G K+Y + T A+ V+E + E+L+ + E
Sbjct: 15 LDP-NEVWEIVGELGDGAFG---KVYKAKNKETGALAAAKVIETKSEEELEDYIVE---- 66
Query: 84 FVKRGVSQLTRLRHPQIL-------------IVQHPLEESSLANVLGHTENLPNPLPPHL 130
+ L HP I+ I+ ++ ++ L L
Sbjct: 67 -----IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM---LELDRGLT--- 115
Query: 131 RSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FGF 183
+ +I+ Q+ E LNFLH+ + IH +L N++++ G ++ FG
Sbjct: 116 ------EPQIQVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGDIRLADFGV 163
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 41.4 bits (98), Expect = 4e-04
Identities = 58/261 (22%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G+G +Y ++ + ++ VL K QLEK ++ + ++R V + LRHP I
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ------LRREVEIQSHLRHPNI 71
Query: 101 LIVQHPLEESS-LANVLGHTENLPN-PLPPHLRSY-KLYDIEIKYGLMQVGEGLNFLHND 157
L + +++ + +L E P + L+ K + + ++ L++ H
Sbjct: 72 LRLYGYFHDATRVYLIL---EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH-- 126
Query: 158 AKKIHHN-LCPHNIIVSHHGAWKI--FGF------DFSRELC-----LDP----TRQLTP 199
+K++ H + P N+++ G KI FG+ +LC L P R
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDE 186
Query: 200 ARDMFSLGATICAVYNNGKS-IISSDQNITFSELGSANINSARL---SDIDEGLRELVKM 255
D++SLG +C + GK ++ T+ I+ + EG R+L+
Sbjct: 187 KVDLWSLG-VLCYEFLVGKPPFEANTYQETY-----KRISRVEFTFPDFVTEGARDLISR 240
Query: 256 MLNTSPELRPDNHDFLKSPYF 276
+L +P RP + L+ P+
Sbjct: 241 LLKHNPSQRPMLREVLEHPWI 261
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 41.7 bits (98), Expect = 4e-04
Identities = 48/357 (13%), Positives = 105/357 (29%), Gaps = 91/357 (25%)
Query: 5 NKLKSTVTSTVNQISSVLPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFV 64
+ + N + ++Y + G IG QG + + T +I +
Sbjct: 2 HHHHHHSSGRENLYFQGGSLLELQKKYHLKGAIG---QGSYGVVRVAIENQTRAIRAIKI 58
Query: 65 LEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQIL----------------------- 101
+ K ++ +++ K E +K V + +L HP I
Sbjct: 59 MNKNKIRQINPKDVER----IKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGH 114
Query: 102 ----IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDIEIKYGLM------------ 145
+ + + + + + + + L
Sbjct: 115 LLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174
Query: 146 -QVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKI----FGF--DFSR---------- 187
Q+ L++LHN + I H ++ P N + S + +++I FG +F +
Sbjct: 175 RQIFSALHYLHN--QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMT 232
Query: 188 -----------ELCLDPTRQLTPARDMFSLGATICAVYN--------NGKSIISSDQNIT 228
E+ P D +S G + + G + + +
Sbjct: 233 TKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL---HLLLMGAVPFPGVNDADTISQVL 289
Query: 229 FSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYFDDIGVKTLN 285
+ + + R+L+ +LN + + R D L+ P+ K
Sbjct: 290 ---NKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIYK 343
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 41.4 bits (98), Expect = 5e-04
Identities = 49/273 (17%), Positives = 90/273 (32%), Gaps = 64/273 (23%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G+G K + + T + + ++ K L K + + + +S L H +
Sbjct: 24 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK------MSMEISIHRSLAHQHV 77
Query: 101 LIVQHPLEES-------------SLANVLGHTENLPNPLPPHLRSYKLYDIEIKYGLMQV 147
+ E++ SL + R L + E +Y L Q+
Sbjct: 78 VGFHGFFEDNDFVFVVLELCRRRSLLELH-------------KRRKALTEPEARYYLRQI 124
Query: 148 GEGLNFLHNDAKKIHH-NLCPHNIIVSHHGAWKIFGFDFSRELCLDPTRQLT-------- 198
G +LH ++ H +L N+ ++ KI F + ++ D R+
Sbjct: 125 VLGCQYLHR--NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 182
Query: 199 -----------PARDMFSLGATICAVYNNGKS-IISSDQNITFSELGSANINSARL---S 243
D++S+G I GK +S T+ I
Sbjct: 183 APEVLSKKGHSFEVDVWSIGC-IMYTLLVGKPPFETSCLKETYL-----RIKKNEYSIPK 236
Query: 244 DIDEGLRELVKMMLNTSPELRPDNHDFLKSPYF 276
I+ L++ ML T P RP ++ L +F
Sbjct: 237 HINPVAASLIQKMLQTDPTARPTINELLNDEFF 269
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 41.6 bits (98), Expect = 6e-04
Identities = 59/347 (17%), Positives = 102/347 (29%), Gaps = 97/347 (27%)
Query: 1 MDVFNKLKSTVTSTVNQISSVLPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDA 60
M V + +TV P P Y T IG+ G+ +Y + +
Sbjct: 26 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGV---VYQAKLCDSGELV 82
Query: 61 SIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQIL----IVQHPLE-------- 108
+I K+ L+ K RE + + +L H I+ E
Sbjct: 83 AI----KKVLQDKRFKNRE---------LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129
Query: 109 ------ESSLANVLGHTENLPNPLPPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIH 162
++ V H LP I +K + Q+ L ++H+ H
Sbjct: 130 LVLDYVPETVYRVARHYSRAKQTLP---------VIYVKLYMYQLFRSLAYIHS-FGICH 179
Query: 163 HNLCPHNIIV-SHHGAWKI--FGF-------DF------SR-----ELCLDPTRQLTPAR 201
++ P N+++ K+ FG + SR EL T T +
Sbjct: 180 RDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT-DYTSSI 238
Query: 202 DMFSLGATICAVYNN-----GKSIISSDQ-NITFSELGS------ANINSAR-------- 241
D++S G + + G S + DQ LG+ +N
Sbjct: 239 DVWSAGCVLAELLLGQPIFPGDSGV--DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQI 296
Query: 242 ---------LSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYFDDI 279
L +L +P R + +FD++
Sbjct: 297 KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 41.2 bits (97), Expect = 6e-04
Identities = 51/273 (18%), Positives = 105/273 (38%), Gaps = 54/273 (19%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMK-LREEYFTFVKRGVSQLTRLRHPQ 99
G+G +Y G T + + L+ R+L K + + +EE L L+HP
Sbjct: 35 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEE--------AEMLKGLQHPN 86
Query: 100 ILIVQ------HPLEESSLANVLGHTENLPN-PLPPHLRSYKLYDIE-IKYGLMQVGEGL 151
I V+ ++ ++ TE + + L +L+ +K+ I+ ++ Q+ +GL
Sbjct: 87 I--VRFYDSWESTVKGKKCIVLV--TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGL 142
Query: 152 NFLH-NDAKKIHHNLCPHNIIVSHH-GAWKI--FGFDFSRELCLDPTRQLTP-------- 199
FLH IH +L NI ++ G+ KI G + TP
Sbjct: 143 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMY 202
Query: 200 ------ARDMFSLGATICAV--------YNNGKSIISSDQNITFSELGSANINSARLSDI 245
+ D+++ G +C + Y+ ++ + +T S ++
Sbjct: 203 EEKYDESVDVYAFG--MCMLEMATSEYPYSECQNAAQIYRRVT-----SGVKPASFDKVA 255
Query: 246 DEGLRELVKMMLNTSPELRPDNHDFLKSPYFDD 278
++E+++ + + + R D L +F +
Sbjct: 256 IPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 41.1 bits (97), Expect = 7e-04
Identities = 49/273 (17%), Positives = 90/273 (32%), Gaps = 64/273 (23%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G+G K + + T + + ++ K L K + + + +S L H +
Sbjct: 50 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK------MSMEISIHRSLAHQHV 103
Query: 101 LIVQHPLEES-------------SLANVLGHTENLPNPLPPHLRSYKLYDIEIKYGLMQV 147
+ E++ SL + R L + E +Y L Q+
Sbjct: 104 VGFHGFFEDNDFVFVVLELCRRRSLLELH-------------KRRKALTEPEARYYLRQI 150
Query: 148 GEGLNFLHNDAKKIHH-NLCPHNIIVSHHGAWKIFGFDFSRELCLDPTRQLT-------- 198
G +LH ++ H +L N+ ++ KI F + ++ D R+
Sbjct: 151 VLGCQYLHR--NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 208
Query: 199 -----------PARDMFSLGATICAVYNNGKS-IISSDQNITFSELGSANINSARL---S 243
D++S+G I GK +S T+ I
Sbjct: 209 APEVLSKKGHSFEVDVWSIGC-IMYTLLVGKPPFETSCLKETYL-----RIKKNEYSIPK 262
Query: 244 DIDEGLRELVKMMLNTSPELRPDNHDFLKSPYF 276
I+ L++ ML T P RP ++ L +F
Sbjct: 263 HINPVAASLIQKMLQTDPTARPTINELLNDEFF 295
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 40.8 bits (96), Expect = 7e-04
Identities = 27/178 (15%), Positives = 66/178 (37%), Gaps = 43/178 (24%)
Query: 21 VLPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREE 80
V G+P D IG G + ++ + + ++ +++ R+ ++ ++ E
Sbjct: 38 VDQGDP-RLLLDSYVKIGEGSTG---IVCLAREKHSGRQVAVKMMDLRKQQRRELLFNE- 92
Query: 81 YFTFVKRGVSQLTRLRHPQIL-------------IVQHPLEESSLANVLGHTENLPNPLP 127
V + +H ++ ++ L+ +L +++
Sbjct: 93 --------VVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-------- 136
Query: 128 PHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FGF 183
+L + +I V + L +LH IH ++ +I+++ G K+ FGF
Sbjct: 137 ------RLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKSDSILLTLDGRVKLSDFGF 187
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 40.0 bits (94), Expect = 0.001
Identities = 36/178 (20%), Positives = 71/178 (39%), Gaps = 43/178 (24%)
Query: 21 VLPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREE 80
V G+P ++Y IG G +Y+ +T Q+ +I + +Q K ++ + E
Sbjct: 13 VSVGDP-KKKYTRFEKIGQGASG---TVYTAMDVATGQEVAIRQMNLQQQPKKELIINE- 67
Query: 81 YFTFVKRGVSQLTRLRHPQIL-------------IVQHPLEESSLANVLGHTENLPNPLP 127
+ + ++P I+ +V L SL +V+ T
Sbjct: 68 --------ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-------- 111
Query: 128 PHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FGF 183
+ + +I + + L FLH++ + IH ++ NI++ G+ K+ FGF
Sbjct: 112 ------CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGF 162
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 40.0 bits (94), Expect = 0.001
Identities = 56/281 (19%), Positives = 101/281 (35%), Gaps = 55/281 (19%)
Query: 30 EYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKL-DMKLREEYFTFVKRG 88
+ I IG ++Y L+K Q+ L D K R + +
Sbjct: 33 NFRIEKKIGRGQFS---EVYRAACLLDGV---PVALKKVQIFDLMDAKARAD----CIKE 82
Query: 89 VSQLTRLRHPQILIVQ---HPLEESSLANVLGHTENLPNPLPPHLRSYKLYDI-----EI 140
+ L +L HP + ++ +E++ L VL + L ++ +K +
Sbjct: 83 IDLLKQLNHPNV--IKYYASFIEDNELNIVLELADA--GDLSRMIKHFKKQKRLIPERTV 138
Query: 141 KYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FGF--DFSRELCLDPTRQ 196
+Q+ L +H + +H ++ P N+ ++ G K+ G FS + +
Sbjct: 139 WKYFVQLCSALEHMH-SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV 197
Query: 197 LTP---------------ARDMFSLGATI---CAV----YNNGKSIISSDQNITFSELGS 234
TP D++SLG + A+ Y + ++ S + I +
Sbjct: 198 GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY-- 255
Query: 235 ANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPY 275
+ S S E LR+LV M +N PE RPD
Sbjct: 256 PPLPSDHYS---EELRQLVNMCINPDPEKRPDVTYVYDVAK 293
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 39.8 bits (93), Expect = 0.002
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 146 QVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSREL 189
V +GL +L K +H ++ P NI+V+ G K+ F S +L
Sbjct: 139 AVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 39.1 bits (92), Expect = 0.002
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 63/273 (23%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G+G +Y T + +I +++K+ + K M R V+ V +L+HP I
Sbjct: 20 GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQR------VQNEVKIHCQLKHPSI 73
Query: 101 LIVQHPLEES-------------SLANVLGHTENLPNPLPPHLRSYKLYDIEIKYGLMQV 147
L + + E+S + L R + E ++ + Q+
Sbjct: 74 LELYNYFEDSNYVYLVLEMCHNGEMNRYL------------KNRVKPFSENEARHFMHQI 121
Query: 148 GEGLNFLHNDAKKIHH-NLCPHNIIVSHHGAWKIFGFDFSRELCLDPTRQLT-------- 198
G+ +LH + I H +L N++++ + KI F + +L + + T
Sbjct: 122 ITGMLYLH--SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYI 179
Query: 199 -----------PARDMFSLGATICAVYNNGKS-IISSDQNITFSELGSANINSARL---S 243
D++SLG + G+ + T + + A S
Sbjct: 180 SPEIATRSAHGLESDVWSLG-CMFYTLLIGRPPFDTDTVKNTLN-----KVVLADYEMPS 233
Query: 244 DIDEGLRELVKMMLNTSPELRPDNHDFLKSPYF 276
+ ++L+ +L +P R L P+
Sbjct: 234 FLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 39.2 bits (92), Expect = 0.003
Identities = 52/301 (17%), Positives = 101/301 (33%), Gaps = 83/301 (27%)
Query: 29 REYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMK-LREEYFTFVKR 87
R Y I IGS G K++ A I + + + + R E
Sbjct: 28 RIYSILKQIGSGGSS---KVFQVLNEKKQIYA-IKYVNLEEADNQTLDSYRNE------- 76
Query: 88 GVSQLTRLRHPQILIVQ---HPLEESSLANVL--GHTENLPNPLPPHLRSYKLYDI-EIK 141
++ L +L+ I++ + + + + V+ G+ + L L+ K D E K
Sbjct: 77 -IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID-----LNSWLKKKKSIDPWERK 130
Query: 142 YGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPT------- 194
+ E ++ +H +H +L P N ++ G K+ F + ++ D T
Sbjct: 131 SYWKNMLEAVHTIH-QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 188
Query: 195 -------------------------RQLTPARDMFSLG-------------ATICAVYNN 216
+++P D++SLG I +
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 248
Query: 217 GKSIISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYF 276
+II + I F + ++ L++++K L P+ R + L PY
Sbjct: 249 LHAIIDPNHEIEFPD------------IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
Query: 277 D 277
Sbjct: 297 Q 297
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 39.1 bits (92), Expect = 0.003
Identities = 49/258 (18%), Positives = 82/258 (31%), Gaps = 87/258 (33%)
Query: 87 RGVSQLTRLRHPQIL----IVQHPLEESSLANVL--------GHTENLPNPLPPHLRSYK 134
R + L L HP I+ H +S+++ V ++ L P
Sbjct: 61 REIKLLQELSHPNIIGLLDAFGH---KSNISLVFDFMETDLEVIIKDNSLVLTPS----- 112
Query: 135 LYDIEIKYGLMQVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKI--FGF--DFSREL 189
IK ++ +GL +LH I H +L P+N+++ +G K+ FG F
Sbjct: 113 ----HIKAYMLMTLQGLEYLHQ--HWILHRDLKPNNLLLDENGVLKLADFGLAKSFG--- 163
Query: 190 CLDPTRQLT---------------------PARDMFSLGATICAVYNN-----GKSIISS 223
P R T DM+++G + + G S +
Sbjct: 164 --SPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-- 219
Query: 224 DQ-NITFSELGSANINS----------------------ARLSDIDEGLRELVKMMLNTS 260
DQ F LG+ S + L +L++ + +
Sbjct: 220 DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFN 279
Query: 261 PELRPDNHDFLKSPYFDD 278
P R LK YF +
Sbjct: 280 PCARITATQALKMKYFSN 297
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 39.0 bits (92), Expect = 0.003
Identities = 61/251 (24%), Positives = 90/251 (35%), Gaps = 69/251 (27%)
Query: 87 RGVSQLTRLRHPQIL----IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDI---E 139
R +S L L HP I+ ++ E+ L V E L L + + L I
Sbjct: 51 REISLLKELNHPNIVKLLDVIHT---ENKLYLVF---EFLHQDLKKFMDASALTGIPLPL 104
Query: 140 IKYGLMQVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPTRQLT 198
IK L Q+ +GL F H + ++ H +L P N++++ GA K+ F +R P R T
Sbjct: 105 IKSYLFQLLQGLAFCH--SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG-VPVRTYT 161
Query: 199 ---------------------PARDMFSLGATICAVYNN-----GKSIISSDQ-NITFSE 231
A D++SLG + G S I DQ F
Sbjct: 162 HEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRIFRT 219
Query: 232 LG-----------------------SANINSARLSDIDEGLRELVKMMLNTSPELRPDNH 268
LG + S + +DE R L+ ML+ P R
Sbjct: 220 LGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAK 279
Query: 269 DFLKSPYFDDI 279
L P+F D+
Sbjct: 280 AALAHPFFQDV 290
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 38.7 bits (91), Expect = 0.003
Identities = 37/164 (22%), Positives = 65/164 (39%), Gaps = 47/164 (28%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G+G +Y ++ ++ VL K QLEK ++ + ++R + + LRHP I
Sbjct: 23 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ------LRREIEIQSHLRHPNI 76
Query: 101 LIVQHPLEESSLANVLGHTENLPNPLPPHLRSY---------KLYDIEIKYGLM------ 145
L + N H R Y +LY K+G
Sbjct: 77 L---------RMYNYF-HDRK---------RIYLMLEFAPRGELYKELQKHGRFDEQRSA 117
Query: 146 ----QVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FGF 183
++ + L++ H K IH ++ P N+++ + G KI FG+
Sbjct: 118 TFMEELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGW 160
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 38.0 bits (89), Expect = 0.005
Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 9/79 (11%)
Query: 111 SLANVLGHTENLPNPLPPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNI 170
SL + +P + + + + L LH+ IH ++ P N+
Sbjct: 91 SLDKFYKQVIDKGQTIPED---------ILGKIAVSIVKALEHLHSKLSVIHRDVKPSNV 141
Query: 171 IVSHHGAWKIFGFDFSREL 189
+++ G K+ F S L
Sbjct: 142 LINALGQVKMCDFGISGYL 160
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 38.0 bits (89), Expect = 0.006
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G+G K+ +T Q ++ ++ K+ L K DM+ R ++R +S L LRHP I
Sbjct: 22 GEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR------IEREISYLRLLRHPHI 75
Query: 101 L 101
+
Sbjct: 76 I 76
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 38.1 bits (89), Expect = 0.006
Identities = 52/301 (17%), Positives = 101/301 (33%), Gaps = 83/301 (27%)
Query: 29 REYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMK-LREEYFTFVKR 87
R Y I IGS G K++ A I + + + + R E
Sbjct: 9 RIYSILKQIGSGGSS---KVFQVLNEKKQIYA-IKYVNLEEADNQTLDSYRNE------- 57
Query: 88 GVSQLTRLRHPQILIVQ---HPLEESSLANVL--GHTENLPNPLPPHLRSYKLYDI-EIK 141
++ L +L+ I++ + + + + V+ G+ + L L+ K D E K
Sbjct: 58 -IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID-----LNSWLKKKKSIDPWERK 111
Query: 142 YGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPT------- 194
+ E ++ +H +H +L P N ++ G K+ F + ++ D T
Sbjct: 112 SYWKNMLEAVHTIH-QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 169
Query: 195 -------------------------RQLTPARDMFSLG-------------ATICAVYNN 216
+++P D++SLG I +
Sbjct: 170 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 229
Query: 217 GKSIISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYF 276
+II + I F + ++ L++++K L P+ R + L PY
Sbjct: 230 LHAIIDPNHEIEFPD------------IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277
Query: 277 D 277
Sbjct: 278 Q 278
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 38.1 bits (89), Expect = 0.007
Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 38/205 (18%)
Query: 27 VTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMK--LREEYFTF 84
V Y +GS G + + T ++ L + + K RE
Sbjct: 27 VPERYQNLSPVGSGAYGSVC---AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE----- 78
Query: 85 VKRGVSQLTRLRHPQIL----IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDIEI 140
+ L ++H ++ + +V T + L ++ KL D +
Sbjct: 79 ----LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHV 134
Query: 141 KYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSR------------- 187
++ + Q+ GL ++H+ A IH +L P N+ V+ KI F +R
Sbjct: 135 QFLIYQILRGLKYIHS-ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR 193
Query: 188 -----ELCLDPTRQLTPARDMFSLG 207
E+ L+ D++S+G
Sbjct: 194 WYRAPEIMLNW-MHYNQTVDIWSVG 217
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 37.7 bits (88), Expect = 0.007
Identities = 32/116 (27%), Positives = 42/116 (36%), Gaps = 27/116 (23%)
Query: 86 KRGVSQLTRLRHPQIL------------IVQHPLEESSLANVLGHTENLPNPLPPHLRSY 133
K V L + RH IL IV E SSL + L H
Sbjct: 68 KNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHL-HASE--TKFEMKKL-- 122
Query: 134 KLYDIEIKYGLMQVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKIFGFDFSRE 188
I+I Q G+++LH AK I H +L +NI + KI F + E
Sbjct: 123 ----IDI---ARQTARGMDYLH--AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 37.6 bits (88), Expect = 0.008
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G G K+ G + T ++ +L ++++ LD+ + +KR + L RHP I
Sbjct: 20 GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK------IKREIQNLKLFRHPHI 73
Query: 101 L 101
+
Sbjct: 74 I 74
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 37.6 bits (88), Expect = 0.008
Identities = 43/262 (16%), Positives = 86/262 (32%), Gaps = 82/262 (31%)
Query: 87 RGVSQLTRLRHPQIL----IVQHP------LE--ESSLANVLGH--TENLPNPLPPHLRS 132
R +S + L+H I+ ++ E ++ L + N P L +
Sbjct: 52 REISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELN--- 108
Query: 133 YKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLD 192
+KY Q+ +GL F H + K +H +L P N++++ G K+ F +R
Sbjct: 109 ------LVKYFQWQLLQGLAFCH-ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG-I 160
Query: 193 PTRQLT---------------------PARDMFSLGATICAVYNN-----GKSIISSDQ- 225
P + + D++S G + + G + +Q
Sbjct: 161 PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE--EQL 218
Query: 226 NITFSELGSAN----------------------------INSARLSDIDEGLRELVKMML 257
+ F +G+ N + +D L + + +L
Sbjct: 219 KLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLL 278
Query: 258 NTSPELRPDNHDFLKSPYFDDI 279
+P++R L P+F +
Sbjct: 279 QLNPDMRLSAKQALHHPWFAEY 300
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure,
structural genomics; 2.20A {Pyrococcus horikoshii}
Length = 253
Score = 37.4 bits (86), Expect = 0.009
Identities = 18/109 (16%), Positives = 36/109 (33%), Gaps = 3/109 (2%)
Query: 383 EVLLKLTPPEQVKSEVLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNALLPRIK 442
E L K+ + VL L L+ D + + +SI+ +A + +L ++
Sbjct: 18 EHLEKILIMAKYDESVLKKLIELLDDDLWTVVKNAISIIMVIAK--TREDLYEPMLKKLF 75
Query: 443 RLCISTSHISVRVNCLVCLGKLIEYLDKWLVLDEVLPFLPQIPSRDPAV 491
L + I + G++ + LV + D
Sbjct: 76 SLLKKSEAIPLTQEIAKAFGQMAK-EKPELVKSMIPVLFANYRIGDEKT 123
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 37.6 bits (87), Expect = 0.009
Identities = 18/96 (18%), Positives = 41/96 (42%)
Query: 140 IKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPTRQLTP 199
+K + QV +GL++LH + IH ++ P NI++S + + + E +
Sbjct: 148 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSG 207
Query: 200 ARDMFSLGATICAVYNNGKSIISSDQNITFSELGSA 235
+ + + N + + + ++LG+A
Sbjct: 208 SAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNA 243
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 37.4 bits (87), Expect = 0.009
Identities = 21/156 (13%), Positives = 58/156 (37%), Gaps = 25/156 (16%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G G +++ + N++ + ++K ++ + + + V ++ L+R+ H I
Sbjct: 33 GSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCW-IEDPKLGKVTLEIAILSRVEHANI 91
Query: 101 LIVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDIEIKYGLM----------QVGEG 150
+ + ++ + + H L+ ++ + Q+
Sbjct: 92 I---------KVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSA 142
Query: 151 LNFLHNDAKKI-HHNLCPHNIIVSHHGAWKI--FGF 183
+ +L K I H ++ NI+++ K+ FG
Sbjct: 143 VGYLR--LKDIIHRDIKDENIVIAEDFTIKLIDFGS 176
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 37.3 bits (87), Expect = 0.010
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 146 QVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSREL 189
+ + L +L IH ++ P NI++ G K+ F S L
Sbjct: 132 AIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRL 175
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 37.4 bits (87), Expect = 0.010
Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 9/79 (11%)
Query: 111 SLANVLGHTENLPNPLPPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNI 170
SL + +P + + + + + L LH+ IH ++ P N+
Sbjct: 135 SLDKFYKQVIDKGQTIP---------EDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNV 185
Query: 171 IVSHHGAWKIFGFDFSREL 189
+++ G K+ F S L
Sbjct: 186 LINALGQVKMCDFGISGYL 204
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 37.0 bits (86), Expect = 0.011
Identities = 24/193 (12%), Positives = 50/193 (25%), Gaps = 48/193 (24%)
Query: 94 RLRHPQI-------------LIVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDIEI 140
R+ P + L+V + SL V P + +
Sbjct: 87 RIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT------SPSPV-GAIRA----- 134
Query: 141 KYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPTRQLTPA 200
+ + + H A P + VS G + + P
Sbjct: 135 ---MQSLAAAADAAH-RAGVALSIDHPSRVRVSIDGDVVLAYPATMPDA--------NPQ 182
Query: 201 RDMFSLGATICA--------VYNNGKSIISSDQNITFSELGSANINSARLSDIDEGLREL 252
D+ +GA++ A +S ++ + T + + DI + +
Sbjct: 183 DDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEP---ADIDRDIPFQISAV 239
Query: 253 VKMMLNTSPELRP 265
+ +R
Sbjct: 240 AARSVQGDGGIRS 252
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 36.9 bits (86), Expect = 0.013
Identities = 34/208 (16%), Positives = 74/208 (35%), Gaps = 50/208 (24%)
Query: 27 VTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVK 86
+Y + +G +++ + N+ V++ + K RE
Sbjct: 34 NQDDYQLVRKLGRGKYS---EVFEAINITNNE---KVVVKILKPVKKKKIKRE------- 80
Query: 87 RGVSQLTRLR-HP---QILIVQHPLEESSLANVLGHTENLPNPLPPHLRSY--KLYDIEI 140
+ L LR P + + + A V H N + L D +I
Sbjct: 81 --IKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD------FKQLYQTLTDYDI 132
Query: 141 KYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSH-HGAWKIFGFDFSR------------ 187
++ + ++ + L++ H+ +H ++ PHN+++ H H ++ + +
Sbjct: 133 RFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 191
Query: 188 --------ELCLDPTRQLTPARDMFSLG 207
EL +D + + DM+SLG
Sbjct: 192 ASRYFKGPELLVD-YQMYDYSLDMWSLG 218
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 36.9 bits (86), Expect = 0.013
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G+G K+ T T Q ++ + ++ L+K DM +R V+R +S L LRHP I
Sbjct: 18 GEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR------VEREISYLKLLRHPHI 71
Query: 101 L 101
+
Sbjct: 72 I 72
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 36.9 bits (86), Expect = 0.013
Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 39/152 (25%)
Query: 37 IGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLR 96
IG G G K+Y + ++ E + + V++ L+
Sbjct: 15 IGIGGFG---KVYRAFWI--GDEVAVKAARHDPDEDISQTIEN-----VRQEAKLFAMLK 64
Query: 97 HPQIL-------------IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDIEIKYG 143
HP I+ +V L VL +PP + +
Sbjct: 65 HPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL-SG----KRIPPDIL------VNW--- 110
Query: 144 LMQVGEGLNFLHNDAKK--IHHNLCPHNIIVS 173
+Q+ G+N+LH++A IH +L NI++
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILIL 142
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 36.9 bits (86), Expect = 0.013
Identities = 34/177 (19%), Positives = 75/177 (42%), Gaps = 42/177 (23%)
Query: 22 LPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEY 81
L +P + IG G +++ G T + +I +++ LE+ + ++ +
Sbjct: 16 LKADP-EELFTKLEKIGKGSFG---EVFKGIDNRTQKVVAIKIID---LEEAEDEIED-- 66
Query: 82 FTFVKRGVSQLTRLRHPQIL-------------IVQHPLEESSLANVLGHTENLPNPLPP 128
+++ ++ L++ P + I+ L S ++L
Sbjct: 67 ---IQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL------------ 111
Query: 129 HLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FGF 183
L + +I L ++ +GL++LH++ KKIH ++ N+++S HG K+ FG
Sbjct: 112 --EPGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGV 165
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 36.8 bits (86), Expect = 0.014
Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 49/177 (27%)
Query: 30 EYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLD-----MKLREEYFTF 84
+Y+ IG QG +++ R T Q L+K +E LRE
Sbjct: 18 KYEKLAKIG---QGTFGEVFKARHRKTGQ---KVALKKVLMENEKEGFPITALRE----- 66
Query: 85 VKRGVSQLTRLRHPQI-----LIVQHPLEESSLANVL------------GHTENLPNPLP 127
+ L L+H + + + + G N+
Sbjct: 67 ----IKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT 122
Query: 128 PHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FG 182
EIK + + GL ++H K +H ++ N++++ G K+ FG
Sbjct: 123 LS---------EIKRVMQMLLNGLYYIH-RNKILHRDMKAANVLITRDGVLKLADFG 169
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 37.1 bits (86), Expect = 0.014
Identities = 51/301 (16%), Positives = 101/301 (33%), Gaps = 83/301 (27%)
Query: 29 REYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMK-LREEYFTFVKR 87
R Y I IGS G K++ Q +I + + + + R E
Sbjct: 56 RIYSILKQIGSGGSS---KVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNE------- 104
Query: 88 GVSQLTRLRHPQILIVQ---HPLEESSLANVL--GHTENLPNPLPPHLRSYKLYDI-EIK 141
++ L +L+ I++ + + + + V+ G+ + L L+ K D E K
Sbjct: 105 -IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID-----LNSWLKKKKSIDPWERK 158
Query: 142 YGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLD--------- 192
+ E ++ +H +H +L P N ++ G K+ F + ++ D
Sbjct: 159 SYWKNMLEAVHTIH-QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 193 -----------------------PTRQLTPARDMFSLGAT-------------ICAVYNN 216
+++P D++SLG I +
Sbjct: 217 VGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 276
Query: 217 GKSIISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYF 276
+II + I F + ++ L++++K L P+ R + L PY
Sbjct: 277 LHAIIDPNHEIEFPD------------IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
Query: 277 D 277
Sbjct: 325 Q 325
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 36.9 bits (86), Expect = 0.015
Identities = 44/224 (19%), Positives = 68/224 (30%), Gaps = 65/224 (29%)
Query: 27 VTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYF---T 83
+ Y + I S G + S +I KR +
Sbjct: 20 MQSPYTVQRFISSGSYGAVCAGV----DSEGIPVAI----KRVFNTVSDGRTVNILSDSF 71
Query: 84 FVKRG---VSQLTRLRHPQIL------------------IVQHPLEESSLANVLGHTENL 122
KR + L HP IL +V L + LA V+
Sbjct: 72 LCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTE-LMRTDLAQVI------ 124
Query: 123 PNPLPPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFG 182
H + + I+Y + + GL+ LH A +H +L P NI+++ + I
Sbjct: 125 ------HDQRIVISPQHIQYFMYHILLGLHVLHE-AGVVHRDLHPGNILLADNNDITICD 177
Query: 183 FDFSRELCLDP-------TR------------QLTPARDMFSLG 207
F+ +RE D R T DM+S G
Sbjct: 178 FNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAG 221
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 36.6 bits (85), Expect = 0.016
Identities = 36/179 (20%), Positives = 64/179 (35%), Gaps = 37/179 (20%)
Query: 19 SSVLPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLR 78
+P + + IG G +Y ++ +I + K
Sbjct: 45 ELFFKDDP-EKLFSDLREIGHGSFG---AVYFARDVRNSEVVAIKKM------SYSGKQS 94
Query: 79 EEYFTFVKRGVSQLTRLRHPQIL------IVQHPL----E--ESSLANVLGHTENLPNPL 126
E + + + V L +LRHP + + +H E S +++L E PL
Sbjct: 95 NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPL 151
Query: 127 PPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FGF 183
++EI +GL +LH+ IH ++ NI++S G K+ FG
Sbjct: 152 Q---------EVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGS 200
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 36.7 bits (85), Expect = 0.019
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G G K+ G T ++ +L ++++ LD+ + ++R + L RHP I
Sbjct: 25 GVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGK------IRREIQNLKLFRHPHI 78
Query: 101 L 101
+
Sbjct: 79 I 79
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 36.2 bits (84), Expect = 0.022
Identities = 28/129 (21%), Positives = 44/129 (34%), Gaps = 18/129 (13%)
Query: 75 MKLREEYFTFVKRGVSQLTRLRHPQIL-----IVQHPLEESSLANVLGHTENLPN-PLPP 128
REE F + + Q LRH IL + + L V ++ + L
Sbjct: 34 FSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV---SDYHEHGSLFD 90
Query: 129 HLRSYKLYDIEIKYGL-MQVGEGLNFLHNDAKK-------IHHNLCPHNIIVSHHGAWKI 180
+L Y + +E L + GL LH + H +L NI+V +G I
Sbjct: 91 YLNRYTV-TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 149
Query: 181 FGFDFSREL 189
+
Sbjct: 150 ADLGLAVRH 158
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 36.2 bits (84), Expect = 0.026
Identities = 32/180 (17%), Positives = 62/180 (34%), Gaps = 43/180 (23%)
Query: 19 SSVLPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLR 78
L P +D+ +G G +Y + T Q +I + +
Sbjct: 20 EDSLTKQP-EEVFDVLEKLGEGSYG---SVYKAIHKETGQIVAIKQ----------VPVE 65
Query: 79 EEYFTFVKRGVSQLTRLRHPQIL-------------IVQHPLEESSLANVLGHTENLPNP 125
+ +K +S + + P ++ IV S+++++
Sbjct: 66 SDLQEIIKE-ISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK---- 120
Query: 126 LPPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FGF 183
L + EI L +GL +LH +KIH ++ NI+++ G K+ FG
Sbjct: 121 --------TLTEDEIATILQSTLKGLEYLHFM-RKIHRDIKAGNILLNTEGHAKLADFGV 171
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 36.0 bits (84), Expect = 0.026
Identities = 44/205 (21%), Positives = 72/205 (35%), Gaps = 54/205 (26%)
Query: 139 EIKYGLMQVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKI--FG----FDFSR---- 187
IK + Q+ GL+FLH + ++ H +L P NI+V+ G K+ FG + F
Sbjct: 121 TIKDMMFQLLRGLDFLH--SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS 178
Query: 188 ----------ELCLDPTRQLTPARDMFSLGATICAVYNN-----GKSIISSDQ-NITFSE 231
E+ L D++S+G ++ G S + DQ
Sbjct: 179 VVVTLWYRAPEVLLQ--SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--DQLGKILDV 234
Query: 232 LGSANIN---------------------SARLSDIDEGLRELVKMMLNTSPELRPDNHDF 270
+G ++DIDE ++L+ L +P R +
Sbjct: 235 IGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 294
Query: 271 LKSPYFDDIGVKTLNYLDSIFQWDN 295
L PYF D+ N + N
Sbjct: 295 LSHPYFQDLERCKENLDSHLPPSQN 319
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 35.9 bits (83), Expect = 0.028
Identities = 28/129 (21%), Positives = 44/129 (34%), Gaps = 18/129 (13%)
Query: 75 MKLREEYFTFVKRGVSQLTRLRHPQIL-----IVQHPLEESSLANVLGHTENLPN-PLPP 128
REE F + + Q LRH IL + + L V ++ + L
Sbjct: 73 FSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV---SDYHEHGSLFD 129
Query: 129 HLRSYKLYDIEIKYGL-MQVGEGLNFLHNDAKK-------IHHNLCPHNIIVSHHGAWKI 180
+L Y + +E L + GL LH + H +L NI+V +G I
Sbjct: 130 YLNRYTV-TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 188
Query: 181 FGFDFSREL 189
+
Sbjct: 189 ADLGLAVRH 197
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 35.8 bits (83), Expect = 0.032
Identities = 31/202 (15%), Positives = 56/202 (27%), Gaps = 63/202 (31%)
Query: 27 VTREYDITGHIGSAGQGLLWK-IYSGT----KRSTNQDASIFVLEKRQLEKLDMKLREEY 81
V R+ + +G G +W+ + G K +++D + E
Sbjct: 6 VARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETE------------- 52
Query: 82 FTFVKRGVSQLTRLRHPQIL-----------------IVQHPLEESSLANVLGHTENLPN 124
+ LRH IL ++ H E SL + L
Sbjct: 53 -------LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL-----T 100
Query: 125 PLPPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKK-------IHHNLCPHNIIVSHHGA 177
L ++ ++ + GL LH + H +L NI+V +G
Sbjct: 101 TLDTVSC-LRI--------VLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ 151
Query: 178 WKIFGFDFSRELCLDPTRQLTP 199
I + +
Sbjct: 152 CCIADLGLAVMHSQSTNQLDVG 173
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear
transport receptor, cell cycle, translation; HET: GNP;
2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A
1f59_A 1o6o_A 1o6p_A
Length = 462
Score = 36.0 bits (82), Expect = 0.035
Identities = 17/103 (16%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Query: 385 LLKLTPPEQVKSEVLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNALLPRIKRL 444
LL + + VLP + +++ + ++ + + E +K ++ + L
Sbjct: 354 LLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTL 413
Query: 445 C--ISTSHISVRVNCLVCLGKLIEYLDKWLVLDEVL-PFLPQI 484
+ + VR +G++ E L + + D L P L +
Sbjct: 414 IELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCL 456
Score = 29.0 bits (64), Expect = 4.8
Identities = 21/180 (11%), Positives = 57/180 (31%), Gaps = 20/180 (11%)
Query: 368 LQEPIQVLLIFMQKMEVLLKLTPPEQVKSEVLPLLYRALES--DSQQIQELCLSILPSLA 425
L Q + + P E++P L + + ++ ++E L + +
Sbjct: 99 LGTETYRPSSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYIC 158
Query: 426 NLIEYPAMK---NALLPRIKRLCISTSH-ISVRVNCLVCLGKLIEYLDKWLVLDEVLPFL 481
I+ ++ N +L I + +V++ L +E+ + F+
Sbjct: 159 QDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFI 218
Query: 482 PQI-----PSRDPAVLMGILGIYKLVLNHKKMAISKEIMATKILPFLMPLVIENSLSLNQ 536
Q+ D V + L ++ + + ++ P + ++ +
Sbjct: 219 MQVVCEATQCPDTRVRVAALQNLVKIM---------SLYYQYMETYMGPALFAITIEAMK 269
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 35.5 bits (82), Expect = 0.039
Identities = 48/305 (15%), Positives = 88/305 (28%), Gaps = 61/305 (20%)
Query: 9 STVTSTVNQISSVLPGNPVT---REYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVL 65
++ + S G V + + G +Y + ++ ++ L
Sbjct: 5 GSLGGASGRDQSDFVGQTVELGELRLRVRRVLAEGGFA---FVYEAQDVGSGREYALKRL 61
Query: 66 EKRQLEKLDMKLREEYFTFVKRGVSQLTRLR-HPQIL------IVQHPLEESSLANVLGH 118
+ EK ++E V + +L HP I+ + ++ A L
Sbjct: 62 LSNEEEKNRAIIQE---------VCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112
Query: 119 TE----NLPNPLPPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHN-LCPHNIIVS 173
TE L L L + Q + +H I H L N+++S
Sbjct: 113 TELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS 172
Query: 174 HHGAWKIFGFDFSRELCLDPTRQLTPA-RDMFSLGAT-----------ICAVYNNGKSII 221
+ G K+ F + + P + R + T I +Y I
Sbjct: 173 NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY--SNFPI 230
Query: 222 SSDQNIT---------------FSELGSANINSARLSDID-----EGLRELVKMMLNTSP 261
Q+I F + I + + S L++ ML +P
Sbjct: 231 GEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNP 290
Query: 262 ELRPD 266
E R
Sbjct: 291 EERLS 295
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 35.4 bits (82), Expect = 0.040
Identities = 29/114 (25%), Positives = 42/114 (36%), Gaps = 27/114 (23%)
Query: 89 VSQLTRLRHPQIL------------IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLY 136
V+ L + RH IL IV E SSL L H +
Sbjct: 83 VAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHL-HVQE--TKFQMFQL----- 134
Query: 137 DIEIKYGLMQVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKIFGFDFSREL 189
I+I Q +G+++LH AK I H ++ +NI + KI F +
Sbjct: 135 -IDI---ARQTAQGMDYLH--AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 35.2 bits (82), Expect = 0.042
Identities = 41/189 (21%), Positives = 64/189 (33%), Gaps = 54/189 (28%)
Query: 139 EIKYGLMQVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKI--FG----FDFSR---- 187
IK + Q GL+FLH A I H +L P NI+V+ G K+ FG + +
Sbjct: 121 TIKDLMRQFLRGLDFLH--ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTP 178
Query: 188 ----------ELCLDPTRQLTPARDMFSLGATICAVYNN-----GKSIISSDQ-NITFSE 231
E+ L T DM+S+G ++ G S DQ F
Sbjct: 179 VVVTLWYRAPEVLLQST--YATPVDMWSVGCIFAEMFRRKPLFCGNSEA--DQLGKIFDL 234
Query: 232 LGS---------------------ANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDF 270
+G + + +++E +L+ ML +P R
Sbjct: 235 IGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRA 294
Query: 271 LKSPYFDDI 279
L+ Y
Sbjct: 295 LQHSYLHKD 303
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 35.4 bits (82), Expect = 0.048
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 20/96 (20%)
Query: 130 LRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSR-- 187
++ KL + I++ + Q+ +GL ++H A IH +L P N+ V+ KI F +R
Sbjct: 120 MKHEKLGEDRIQFLVYQMLKGLRYIHA-AGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178
Query: 188 ----------------ELCLDPTRQLTPARDMFSLG 207
E+ L+ + T D++S+G
Sbjct: 179 DSEMTGYVVTRWYRAPEVILN-WMRYTQTVDIWSVG 213
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 35.0 bits (81), Expect = 0.055
Identities = 36/205 (17%), Positives = 75/205 (36%), Gaps = 39/205 (19%)
Query: 27 VTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMK--LREEYFTF 84
+ + Y H+GS G + S + + + +I L + ++ K RE
Sbjct: 22 LPKTYVSPTHVGSGAYGSVC---SAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRE----- 73
Query: 85 VKRGVSQLTRLRHPQIL----IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDIEI 140
+ L ++H ++ + + + + L + K + +I
Sbjct: 74 ----LLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGL-KFSEEKI 128
Query: 141 KYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSR------------- 187
+Y + Q+ +GL ++H+ A +H +L P N+ V+ KI F +R
Sbjct: 129 QYLVYQMLKGLKYIHS-AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 187
Query: 188 -----ELCLDPTRQLTPARDMFSLG 207
E+ L D++S+G
Sbjct: 188 WYRAPEVILSW-MHYNQTVDIWSVG 211
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear
transport, exportin, RAN GTPase, protein transport; HET:
GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1
PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Length = 530
Score = 35.4 bits (81), Expect = 0.056
Identities = 40/195 (20%), Positives = 78/195 (40%), Gaps = 26/195 (13%)
Query: 357 DVLPHLIPVMKLQEPIQVLLIFMQKMEVLLKLT-----PPEQ----VKSEVLPLLYRALE 407
V+P L+ M+ +P + ++E LT Q V ++ +PL + L
Sbjct: 130 GVVPRLVEFMRENQPEML------QLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLY 183
Query: 408 SDSQQIQELCLSILPSLA----NLIEYPAMKNALLPRIKRLCISTSHISVRVNCLVCLGK 463
+ S +++E + L ++A + +Y NA+ P + +++ S+ L
Sbjct: 184 TGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILG--LFNSNKPSLIRTATWTLSN 241
Query: 464 LI---EYLDKWLVLDEVLPFLPQ-IPSRDPAVLMGILGIYKLVLNHKKMAISKEIMATKI 519
L + W V+ + LP L + I S D L+ + + + AI I +I
Sbjct: 242 LCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDV-RI 300
Query: 520 LPFLMPLVIENSLSL 534
L+ L+ S +
Sbjct: 301 PKRLVELLSHESTLV 315
Score = 34.2 bits (78), Expect = 0.12
Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 19/131 (14%)
Query: 390 PPEQVKSEVLPLLYRALESDSQQIQE---LCLSILPSLANLIEYPAMKNALLPRIKRLCI 446
P V S+ LP L + + S + +S L + + R+ L +
Sbjct: 250 PDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVEL-L 308
Query: 447 STSHISVRVNCLVCLGKLIEYLDKWLVLDEVLPFLPQIPSRDPAVLMGILGIYKLVLNHK 506
S V+ L +G ++ D + G+L +L+L+
Sbjct: 309 SHESTLVQTPALRAVGNIVTGNDLQ---------------TQVVINAGVLPALRLLLSSP 353
Query: 507 KMAISKEIMAT 517
K I KE T
Sbjct: 354 KENIKKEACWT 364
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 34.7 bits (80), Expect = 0.066
Identities = 28/129 (21%), Positives = 45/129 (34%), Gaps = 18/129 (13%)
Query: 75 MKLREEYFTFVKRGVSQLTRLRHPQIL-----IVQHPLEESSLANVLGHTENLPN-PLPP 128
EE F + + Q +RH IL ++ + L + T+ N L
Sbjct: 68 FFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI---TDYHENGSLYD 124
Query: 129 HLRSYKLYDIEIKYGL-MQVGEGLNFLHNDAKK-------IHHNLCPHNIIVSHHGAWKI 180
+L+S L D + L GL LH + H +L NI+V +G I
Sbjct: 125 YLKSTTL-DAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI 183
Query: 181 FGFDFSREL 189
+ +
Sbjct: 184 ADLGLAVKF 192
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 34.6 bits (80), Expect = 0.072
Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 24/175 (13%)
Query: 9 STVTSTVNQISSVLPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKR 68
++ S ++ + + G G + G ++ST +I K+
Sbjct: 3 GSMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGT---VQLGKEKSTGMSVAI----KK 55
Query: 69 QLEKLDMKLREEYFTFVKRGVSQLTRLRHP---QILIVQHPLEESSLANVLGH--TENLP 123
++ + RE + + L L HP Q+ + L E ++ + E +P
Sbjct: 56 VIQDPRFRNRE------LQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP 109
Query: 124 NPLPPHLRSY-----KLYDIEIKYGLMQVGEGLNFLHNDAKKI-HHNLCPHNIIV 172
+ L R+Y I IK L Q+ + LH + + H ++ PHN++V
Sbjct: 110 DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV 164
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 34.8 bits (80), Expect = 0.072
Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 22/129 (17%)
Query: 72 KLDMKLREEYFTFVKRGVSQLTRLRHPQIL------IVQHPLEESSLANVLGHTENLPN- 124
R+ + + ++ + H I V E PN
Sbjct: 43 VFSFANRQNFINEKN--IYRVPLMEHDNIARFIVGDERVTADGRMEYLLV---MEYYPNG 97
Query: 125 PLPPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKK--------IHHNLCPHNIIVSHHG 176
L +L + + V GL +LH + + H +L N++V + G
Sbjct: 98 SLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDG 157
Query: 177 AWKI--FGF 183
I FG
Sbjct: 158 TCVISDFGL 166
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone;
2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Length = 296
Score = 34.6 bits (79), Expect = 0.073
Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 398 VLPLLYRALESDSQQIQELCLSILPSLANLIEY---PAMKNALLPRIKRLCISTSHISVR 454
+ L+ R LE+ + ++ ++ + + + + L ++ RL + +VR
Sbjct: 83 MHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVR 142
Query: 455 VNCLVCLGKLI 465
V L + L+
Sbjct: 143 VKALFAISCLV 153
Score = 33.1 bits (75), Expect = 0.23
Identities = 17/135 (12%), Positives = 46/135 (34%), Gaps = 5/135 (3%)
Query: 337 FVLPNVLYIAEQCSQQEFTRDVLPHLIPVMKLQEPIQVLLIFMQKMEVLLKLTPPEQ--- 393
++ +Q L L+ ++ V + + + L++
Sbjct: 104 QLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQF 163
Query: 394 VKSEVLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNALLPRIKRL--CISTSHI 451
++ + +L RA++ Q+++ +L +L + +++L + T H
Sbjct: 164 LRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHS 223
Query: 452 SVRVNCLVCLGKLIE 466
+ L L L+
Sbjct: 224 PFHEHVLGALCSLVT 238
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein,
protein transport, armadillo repeats; 2.2A {Homo
sapiens} PDB: 3tj3_A
Length = 450
Score = 34.9 bits (80), Expect = 0.079
Identities = 26/158 (16%), Positives = 62/158 (39%), Gaps = 11/158 (6%)
Query: 394 VKSEVLPLLYRALESDSQQIQELCLSILPSLA----NLIEYPAMKNALLPRIKRLCISTS 449
+++ +P+ L S+ + +QE + L ++A +Y + +LP + +L +
Sbjct: 104 IQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDY-VLDCNILPPLLQLFSKQN 162
Query: 450 HISVRVNCLVCLGKLI---EYLDKWLVLDEVLPFLPQ-IPSRDPAVLMGILGIYKLVLNH 505
+++ N + L L ++ + L L + D VL + +
Sbjct: 163 RLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFVSDTDVLADACWALSYLSDG 222
Query: 506 KKMAISKEIMATKILPFLMPLVIENSLSLNQFNSLVAV 543
I + ++ + L+ L++ N + +L AV
Sbjct: 223 PNDKI-QAVIDAGVCRRLVELLMHNDYKV-VSPALRAV 258
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 34.1 bits (77), Expect = 0.096
Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 1/68 (1%)
Query: 139 EIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPTRQLT 198
K L Q+ L + H +L N+++ K+ + + P+ L
Sbjct: 162 TAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTI-PSCGLQ 220
Query: 199 PARDMFSL 206
+ ++L
Sbjct: 221 VSIIDYTL 228
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 34.3 bits (79), Expect = 0.10
Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 46/163 (28%)
Query: 37 IGSAGQGLLWK-IYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRL 95
IG G ++ + G V + + D + + + F KR V +
Sbjct: 41 IGKGRFGQVYHGRWHGE-----------VAIRLIDIERDNEDQLKAF---KREVMAYRQT 86
Query: 96 RHPQIL-------------IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDIEIKY 142
RH ++ I+ + +L +V+ + L + +I
Sbjct: 87 RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV-R--DAKIVLDVNKT------RQI-- 135
Query: 143 GLMQVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKI--FG 182
++ +G+ +LH AK I H +L N+ + I FG
Sbjct: 136 -AQEIVKGMGYLH--AKGILHKDLKSKNVFYDNGKV-VITDFG 174
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 34.3 bits (79), Expect = 0.10
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 130 LRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSREL 189
+ L + I Y ++ GL+ LH K IH ++ N++++ + K+ F S +L
Sbjct: 121 TKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 34.1 bits (78), Expect = 0.12
Identities = 41/207 (19%), Positives = 71/207 (34%), Gaps = 42/207 (20%)
Query: 27 VTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMK--LREEYFTF 84
V + Y IGS QG++ + +++ +I L + + K RE
Sbjct: 60 VLKRYQNLKPIGSGAQGIVC---AAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRE----- 111
Query: 85 VKRGVSQLTRLRHPQIL----IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDIEI 140
+ + + H I+ + +V E + L ++ +L +
Sbjct: 112 ----LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM-ELDHERM 166
Query: 141 KYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSR------------- 187
Y L Q+ G+ LH A IH +L P NI+V KI F +R
Sbjct: 167 SYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 225
Query: 188 -------ELCLDPTRQLTPARDMFSLG 207
E+ L D++S+G
Sbjct: 226 TRYYRAPEVIL--GMGYKENVDIWSVG 250
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein
transport importin, transportin, transport protein;
2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A
2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Length = 852
Score = 34.4 bits (78), Expect = 0.12
Identities = 27/147 (18%), Positives = 57/147 (38%), Gaps = 12/147 (8%)
Query: 385 LLKLTPPEQVKSEVLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMK--NALLPRIK 442
+L +++ +LPLL L ++E + +L ++A + L+P +
Sbjct: 347 VLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLI 406
Query: 443 RLCISTSHISVRVNCLVCLGKLIEYLDKWLVLDEVLPFLPQIPSRDPAVLMGILGIYKLV 502
+ C+S VR L + ++ + P + ++ L IL K V
Sbjct: 407 Q-CLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTEL-------LKRILDSNKRV 458
Query: 503 LNHKKMAISK--EIMATKILPFLMPLV 527
A + E T+++P+L ++
Sbjct: 459 QEAACSAFATLEEEACTELVPYLAYIL 485
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic
transport, nuclear trafficking, importin- beta, complex;
1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB:
2bku_B 3ea5_B* 3nd2_A
Length = 861
Score = 34.4 bits (78), Expect = 0.13
Identities = 21/167 (12%), Positives = 56/167 (33%), Gaps = 9/167 (5%)
Query: 385 LLKLTPPEQVKSEVLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMK---NALLPRI 441
L + VL + + + +D+ + +E + S+ + + + LP I
Sbjct: 357 LFAQNCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSI 416
Query: 442 KRLCISTSHISVRVNCLVCLGKLIEYLDKWLV----LDEVLPFLPQIPSRDPAVLMGILG 497
L ++ + V+ C+G++ + + + + L V+ P V
Sbjct: 417 LNL-MNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSW 475
Query: 498 IYKLVLNHKKMAISKEIMATKILPFLMPLVIENSLSLNQFNSLVAVI 544
++ + + + L+ + N+FN+ +
Sbjct: 476 TIINLVEQLA-EATPSPIYNFYPALVDGLIGAANRIDNEFNARASAF 521
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 33.6 bits (77), Expect = 0.15
Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 28/130 (21%)
Query: 89 VSQLTRLRHPQIL-------------IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKL 135
+ L P+I+ I LE SL ++ LP
Sbjct: 101 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDR--------- 151
Query: 136 YDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAW-KIFGFDFSRELCLDPT 194
Y L Q EGL +LH + +H ++ N+++S G+ + F + L D
Sbjct: 152 ----ALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206
Query: 195 RQLTPARDMF 204
+ D
Sbjct: 207 GKSLLTGDYI 216
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 33.4 bits (77), Expect = 0.15
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 146 QVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FG 182
+ LN L + K IH ++ P NI++ G K+ FG
Sbjct: 133 ATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFG 171
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 33.4 bits (77), Expect = 0.16
Identities = 37/172 (21%), Positives = 62/172 (36%), Gaps = 31/172 (18%)
Query: 27 VTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASI-----F---VLEKRQLEKLDMKLR 78
V Y +IG G++ S +I F +R LR
Sbjct: 25 VGPRYTNLSYIGEGAYGMVC---SAYDNLNKVRVAIKKISPFEHQTYCQR-------TLR 74
Query: 79 EEYFTFVKRGVSQLTRLRHP---QILIVQHPLEESSLANVLGHTENLPNPLPPHLRSYKL 135
E + L R RH I + + +V + + L L++ L
Sbjct: 75 E---------IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL 125
Query: 136 YDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSR 187
+ I Y L Q+ GL ++H+ A +H +L P N++++ KI F +R
Sbjct: 126 SNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 33.4 bits (77), Expect = 0.18
Identities = 38/183 (20%), Positives = 72/183 (39%), Gaps = 35/183 (19%)
Query: 16 NQISSVLPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDM 75
N I+S P Y + IG +G K+ T ++ +I +++K QL +
Sbjct: 2 NSIASCADEQPHIGNYRLLKTIG---KGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL 58
Query: 76 KLREEYFTFVKRGVSQLTRLRHPQILIVQHPLE-ESSLANVLGHTENLPNPLPPHLRSYK 134
+ + R V + L HP I+ + +E E +L ++ + +
Sbjct: 59 QK-------LFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG-----------GE 100
Query: 135 LYDIEIKYGLM----------QVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHGAWKIFGF 183
++D + +G M Q+ + + H K+I H +L N+++ KI F
Sbjct: 101 VFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ--KRIVHRDLKAENLLLDADMNIKIADF 158
Query: 184 DFS 186
FS
Sbjct: 159 GFS 161
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 33.5 bits (77), Expect = 0.18
Identities = 45/315 (14%), Positives = 79/315 (25%), Gaps = 94/315 (29%)
Query: 22 LPGNPVT---REYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLR 78
G+ V + Y +G G + ++ + + + + R
Sbjct: 19 FQGHMVIIDNKHYLFIQKLGEGGFS---YVDLVEGLHDGHFYALKRILCHEQQDREEAQR 75
Query: 79 EEYFTFVKRGVSQLTRLRHPQILIVQHPLEESSLANVLGHTE-----------NLPNPLP 127
E HP IL L L E L N +
Sbjct: 76 E---------ADMHRLFNHPNIL----RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIE 122
Query: 128 PHLRSYKLYD-IEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFS 186
+I + L+ + GL +H H +L P NI++ G +
Sbjct: 123 RLKDKGNFLTEDQILWLLLGICRGLEAIH-AKGYAHRDLKPTNILLGDEGQPVLMDLGSM 181
Query: 187 RELCLDPTRQ-------------------------------LTPARDMFSLGATICAVY- 214
+ C+ + D++SLG C +Y
Sbjct: 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLG---CVLYA 238
Query: 215 ---------------NNGKSIISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNT 259
++ + + +I S R S L +L+ M+
Sbjct: 239 MMFGEGPYDMVFQKGDSVALAVQNQLSIPQ---------SPRHSS---ALWQLLNSMMTV 286
Query: 260 SPELRPDNHDFLKSP 274
P RP L
Sbjct: 287 DPHQRPHIPLLLSQL 301
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 33.4 bits (77), Expect = 0.19
Identities = 30/149 (20%), Positives = 64/149 (42%), Gaps = 13/149 (8%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G+G K+ T ++ +L+K++L ++ VK+ + L RLRH +
Sbjct: 14 GEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEAN-----VKKEIQLLRRLRHKNV 68
Query: 101 LI---VQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDIEIKYGLMQVGEGLNFLHND 157
+ V + E+ + V+ + + + + + Q+ +GL +LH
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH-- 126
Query: 158 AKKIHH-NLCPHNIIVSHHGAWKI--FGF 183
++ I H ++ P N++++ G KI G
Sbjct: 127 SQGIVHKDIKPGNLLLTTGGTLKISALGV 155
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 33.1 bits (76), Expect = 0.20
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 19/92 (20%)
Query: 134 KLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDP 193
+L + Y L Q+ G+ LH A IH +L P NI+V KI F +R
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLH-SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 181
Query: 194 -------TR-----------QLTPARDMFSLG 207
TR D++S+G
Sbjct: 182 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger,
ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Length = 1230
Score = 33.5 bits (75), Expect = 0.20
Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 11/112 (9%)
Query: 391 PEQVKSEVLPLLYRALESDSQQIQE--------LCLSILPSLANLIEYPAMKNALLPRIK 442
E ++ L + SD +Q+++ + + P+ + + + R+
Sbjct: 80 KEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLT 139
Query: 443 RLCISTSHISVRVNCLVCLGKLIEYLDKWLV--LDEVLP-FLPQIPSRDPAV 491
+SV++ L + ++ LV +L LPQ+ S AV
Sbjct: 140 SAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAV 191
Score = 29.3 bits (64), Expect = 4.1
Identities = 21/156 (13%), Positives = 49/156 (31%), Gaps = 10/156 (6%)
Query: 340 PNVLYIAEQCSQQEFTRDVLPHLIPVMKLQEPIQVLLIFMQKMEVLLKLTPPEQVKSEVL 399
V I + + I + L+ I L + + ++
Sbjct: 82 YQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCK------KIT 135
Query: 400 PLLYRALESD-SQQIQELCLSILPSLANLIEYPAMKNALLPRIKRL--CISTSHISVRVN 456
L A+ +Q L I+ + + + N + L +++ ++VR
Sbjct: 136 GRLTSAIAKQEDVSVQLEALDIMADMLSRQG-GLLVNFHPSILTCLLPQLTSPRLAVRKR 194
Query: 457 CLVCLGKLIEYLDKWLVLDEVLPFLPQIPSRDPAVL 492
++ LG L+ + +D + L ++ D
Sbjct: 195 TIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMST 230
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear
import, heat motif, NLS-binding; 2.30A {Homo sapiens}
SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A
2qna_A
Length = 876
Score = 33.3 bits (75), Expect = 0.26
Identities = 15/97 (15%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Query: 385 LLKLTPPEQVKSEVLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNALLPRIKRL 444
LL + + VLP + +++ + ++ + + E +K ++ + L
Sbjct: 354 LLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTL 413
Query: 445 --CISTSHISVRVNCLVCLGKLIEYLDKWLVLDEVLP 479
+ + VR +G++ E L + + D L
Sbjct: 414 IELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLA 450
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 32.6 bits (75), Expect = 0.29
Identities = 7/61 (11%), Positives = 23/61 (37%), Gaps = 8/61 (13%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G+G ++ R T + ++ +++ ++ +K+ + L H +
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHENV 67
Query: 101 L 101
+
Sbjct: 68 V 68
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 31.8 bits (71), Expect = 0.32
Identities = 7/36 (19%), Positives = 17/36 (47%), Gaps = 10/36 (27%)
Query: 379 MQKMEVLLKLTPPEQVKSEVLPLLYRALESDSQQIQ 414
++K++ LKL + P L A+++ ++
Sbjct: 22 LKKLQASLKLYADDSA-----PAL--AIKA---TME 47
Score = 31.1 bits (69), Expect = 0.57
Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 5/18 (27%)
Query: 66 EKRQLEKLD--MKLREEY 81
EK+ L+KL +KL Y
Sbjct: 18 EKQALKKLQASLKL---Y 32
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane,
protein transport-prote binding complex; HET: GNP; 2.90A
{Bos taurus}
Length = 355
Score = 32.7 bits (74), Expect = 0.33
Identities = 26/174 (14%), Positives = 61/174 (35%), Gaps = 19/174 (10%)
Query: 343 LYIAEQCSQQEFTRDVLPHLIPVMKLQEPIQVLLIFMQKMEVLLKLTPPEQVKSEVLPLL 402
+ E E T + + + + +P + ++ + +++ + V L
Sbjct: 55 INQGEHLGTTEAT-EAFFAMTKLFQSNDPTLRRMCYL----TIKEMSCIAEDVIIVTSSL 109
Query: 403 YRALESDSQQIQELCLSILPSLANLIEYPAMKNALLPRIKRLCISTSHISVRVNCLVCLG 462
+ + + + L + + M A+ +K+ I SV + LV
Sbjct: 110 TKDMTGKEDSYRGPAVRALCQITD----STMLQAIERYMKQ-AIVDKVPSVSSSALVSSL 164
Query: 463 KLIEYLDKWLVLDEVLPFLPQI----PSRDPAVLMGILGIYKLVLNHKKMAISK 512
L++ D V ++ + S + V LG+ V + ++A+SK
Sbjct: 165 HLLK-----CSFDVVKRWVNEAQEAASSDNIMVQYHALGLLYHVRKNDRLAVSK 213
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 32.4 bits (74), Expect = 0.34
Identities = 25/184 (13%), Positives = 56/184 (30%), Gaps = 57/184 (30%)
Query: 28 TREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKR 87
+ + G +WK N+ ++ + + ++ + +
Sbjct: 23 SMPLQLLEVKARGRFGCVWK---AQLL--NEYVAVKIFPIQD---------KQSWQN-EY 67
Query: 88 GVSQLTRLRHPQIL-----------------IVQHPLEESSLANVLGHTENLPNPLPPHL 130
V L ++H IL ++ E+ SL++ L N + +
Sbjct: 68 EVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-----NVVSWNE 122
Query: 131 RSYKLYDIEIKYGLMQVGEGLNFLHNDAKK---------IHHNLCPHNIIVSHHGAWKI- 180
I + + GL +LH D H ++ N+++ ++ I
Sbjct: 123 L------CHIAETMAR---GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173
Query: 181 -FGF 183
FG
Sbjct: 174 DFGL 177
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 32.3 bits (74), Expect = 0.35
Identities = 7/61 (11%), Positives = 23/61 (37%), Gaps = 8/61 (13%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G+G ++ R T + ++ +++ ++ +K+ + L H +
Sbjct: 16 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN--------IKKEICINKMLNHENV 67
Query: 101 L 101
+
Sbjct: 68 V 68
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 32.2 bits (74), Expect = 0.41
Identities = 40/196 (20%), Positives = 62/196 (31%), Gaps = 58/196 (29%)
Query: 139 EIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVS-----HHGAWKIFGFDFSRELCLDP 193
IK L Q+ G+NF H + +H +L P N+++S KI F +R P
Sbjct: 133 VIKSFLYQLINGVNFCH-SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG-IP 190
Query: 194 TRQLT---------------------PARDMFSLGATICAVYNNGKSIISSDQNI----- 227
RQ T + D++S+ I A + D I
Sbjct: 191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIA-CIWAEMLMKTPLFPGDSEIDQLFK 249
Query: 228 TFSELGS------------------------ANINSARLSDIDEGLRELVKMMLNTSPEL 263
F LG + + +D+ +L+ ML P
Sbjct: 250 IFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVK 309
Query: 264 RPDNHDFLKSPYFDDI 279
R + L+ PYF
Sbjct: 310 RISAKNALEHPYFSHN 325
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 31.8 bits (73), Expect = 0.53
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 144 LMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FG 182
Q+ +G+ H D + +H ++ P NI++ + KI FG
Sbjct: 117 TNQILDGIKHAH-DMRIVHRDIKPQNILIDSNKTLKIFDFG 156
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 31.5 bits (72), Expect = 0.62
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 144 LMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FG 182
+ + LNF H IH ++ P NI++S A K+ FG
Sbjct: 122 IADACQALNFSH-QNGIIHRDVKPANIMISATNAVKVMDFG 161
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding,
nucleus, zinc; 2.04A {Saccharomyces cerevisiae}
Length = 216
Score = 31.2 bits (71), Expect = 0.64
Identities = 6/34 (17%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 405 ALESDSQQIQELC-LSILPSLANLIEYPAMKNAL 437
L++ ++ L ++ +IE P ++ A+
Sbjct: 152 HLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAV 185
>1yvu_A Hypothetical protein AQ_1447; RNAse H fold, RNA binding protein,
gene regulation; 2.90A {Aquifex aeolicus} SCOP:
b.34.14.1 c.55.3.10 PDB: 2f8s_A 2f8t_A 2nub_A
Length = 706
Score = 32.0 bits (72), Expect = 0.67
Identities = 31/190 (16%), Positives = 59/190 (31%), Gaps = 18/190 (9%)
Query: 79 EEYFTFVKRGVSQLTRLRHPQILIVQHPLEESSLANVLGHTENLPNP-LPPHLRSYKLYD 137
EE+F + + + + L+ L E + VL P L P L L D
Sbjct: 207 EEFFRLCMERSTHKSSKKAWEELLKNRELREKAFLVVLEKGYTYPATILKPVLTYENLED 266
Query: 138 IE----IKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDP 193
E M+ G+ LN + ++ L + +G+ S E
Sbjct: 267 EERNEVADIVRMEPGKRLNLIRYILRRYVKAL-------------RDYGWYISPEEERAK 313
Query: 194 TRQLTPARDMFSLGATICAVYNNGKSIISSDQNITFSELGSANINSARLSDIDEGLRELV 253
+ + + G + N K + + L I+ + ++ E +
Sbjct: 314 GKLNFKDTVLDAKGKNTKVITNLRKFLELCRPFVKKDVLSVEIISVSVYKKLEWRKEEFL 373
Query: 254 KMMLNTSPEL 263
K ++N
Sbjct: 374 KELINFLKNK 383
>3oqs_A Importin subunit alpha-2; importin alpha, karyopherin alpha,
nuclear localisation SIGN recognition, chloride
intracellular channel 4, CLIC4 NLS; 2.00A {Mus musculus}
PDB: 3rz9_A 3rzx_A 1q1s_C 1q1t_C 3tpo_A 3knd_A 1ejy_I
1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C 1ial_A
1y2a_C 3btr_C 3l3q_A* 3ve6_A 2c1m_A ...
Length = 510
Score = 31.5 bits (71), Expect = 0.70
Identities = 29/161 (18%), Positives = 55/161 (34%), Gaps = 13/161 (8%)
Query: 394 VKSEVLPLLYRALESDSQQIQELCLSIL-------PSLANLIEYPAMKNALLPRIKRLCI 446
V +P L S I E + L + +L+ + LL + +
Sbjct: 140 VDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDL 199
Query: 447 STSHISVRVNCLVCLGKLI---EYLDKWLVLDEVLPFLPQ-IPSRDPAVLMGILGIYKLV 502
ST N L L ++++LP L + + DP VL +
Sbjct: 200 STLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYL 259
Query: 503 LNHKKMAISKEIMATKILPFLMPLVIENSLSLNQFNSLVAV 543
+ I + ++ ++P L+ L+ L + +L A+
Sbjct: 260 TDGPNERI-EMVVKKGVVPQLVKLLGATELPI-VTPALRAI 298
Score = 29.2 bits (65), Expect = 4.7
Identities = 14/135 (10%), Positives = 43/135 (31%), Gaps = 11/135 (8%)
Query: 394 VKSEVLPLLYRALESDSQQIQELCLSILPSLA----NLIEYPAMKNALLPRIKRLCISTS 449
+ + L + L + IQ+ + ++ + I+ + + +S +
Sbjct: 313 IDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVG--VLSKA 370
Query: 450 HISVRVNCLVCLGKLIEYLD----KWLVLDEVL-PFLPQIPSRDPAVLMGILGIYKLVLN 504
+ + +LV ++ P + + ++D ++ IL +
Sbjct: 371 DFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQ 430
Query: 505 HKKMAISKEIMATKI 519
+ E ++ I
Sbjct: 431 AAEKLGETEKLSIMI 445
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 31.5 bits (72), Expect = 0.78
Identities = 54/324 (16%), Positives = 99/324 (30%), Gaps = 98/324 (30%)
Query: 24 GNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFT 83
G Y IG+ G ++ +++ A I K+ L+ K RE
Sbjct: 35 GEQREIAYTNCKVIGNGSFG---VVFQAKLVESDEVA-I----KKVLQDKRFKNRE---- 82
Query: 84 FVKRGVSQLTRLRHPQIL----IVQHPLE--------------ESSLANVLGHTENLPNP 125
+ + ++HP ++ + ++ H L
Sbjct: 83 -----LQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQT 137
Query: 126 LPPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIV-SHHGAWKI--FG 182
+P + IK + Q+ L ++H+ H ++ P N+++ G K+ FG
Sbjct: 138 MPM---------LLIKLYMYQLLRSLAYIHS-IGICHRDIKPQNLLLDPPSGVLKLIDFG 187
Query: 183 ----FD---------FSR-----ELCLDPTRQLTPARDMFSLGATICAVYNN-----GKS 219
SR EL T T D++S G + + G+S
Sbjct: 188 SAKILIAGEPNVSYICSRYYRAPELIFGAT-NYTTNIDIWSTGCVMAELMQGQPLFPGES 246
Query: 220 IISSDQ-NITFSELGS------ANINSAR-----------------LSDIDEGLRELVKM 255
I DQ LG+ +N +L+
Sbjct: 247 GI--DQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISR 304
Query: 256 MLNTSPELRPDNHDFLKSPYFDDI 279
+L +P R + L P+FD++
Sbjct: 305 LLEYTPSARLTAIEALCHPFFDEL 328
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding;
1.80A {Synthetic}
Length = 201
Score = 30.7 bits (70), Expect = 0.86
Identities = 10/68 (14%), Positives = 23/68 (33%), Gaps = 9/68 (13%)
Query: 397 EVLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNALLPRIKRLCISTSHISVRVN 456
+ L +AL+ + +++ L + + + AL VR+
Sbjct: 76 RAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKAL---------KDEDWFVRIA 126
Query: 457 CLVCLGKL 464
LG++
Sbjct: 127 AAFALGEI 134
>1ddz_A Carbonic anhydrase; alpha-beta-alpha, lyase; 2.20A {Porphyridium
purpureum} SCOP: c.53.2.1 c.53.2.1
Length = 496
Score = 31.1 bits (70), Expect = 1.0
Identities = 7/51 (13%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Query: 388 LTPPEQVKSEVLPLLYRALESDSQQIQELC-LSILPSLANLIEYPAMKNAL 437
L V+ L + + L +++L + N+ +++A
Sbjct: 406 LRHIRDVRRHNQAEL-SRITDPKDSLNRLIEINVLEQMHNVCATSIVQDAW 455
Score = 29.1 bits (65), Expect = 4.2
Identities = 5/34 (14%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 405 ALESDSQQIQELC-LSILPSLANLIEYPAMKNAL 437
+ +++ L L++L + N+ +++A
Sbjct: 168 KCKDGDEELNRLIELNVLEQVHNVCATSIVQDAW 201
>2iw3_A Elongation factor 3A; acetylation, ATP-binding, protein
biosynthesis, nucleotide-binding, phosphorylation, RNA-
binding, rRNA-binding; HET: ADP; 2.4A {Saccharomyces
cerevisiae} PDB: 2iwh_A* 2ix3_A 2ix8_A
Length = 986
Score = 31.2 bits (70), Expect = 1.1
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 398 VLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMK----NALLPRIKRLCISTSHISV 453
++PLL R L I+ I+ ++ L+E P + LLP +K + +
Sbjct: 252 MVPLLSRGLNERETGIKRKSAVIIDNMCKLVEDPQVIAPFLGKLLPGLKSNFATIADPEA 311
Query: 454 RVNCLVCLGKLIE 466
R L L L
Sbjct: 312 REVTLRALKTLRR 324
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site
mutant, lyase, META; 2.00A {Haemophilus influenzae} PDB:
3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A
3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A
Length = 229
Score = 30.5 bits (69), Expect = 1.1
Identities = 9/51 (17%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 388 LTPPEQVKSEVLPLLYRALESDSQQIQELC-LSILPSLANLIEYPAMKNAL 437
L + + LL + S ++ L +++ + NL +K+A
Sbjct: 120 LLHIRDIWFKHGHLLGKL--SPEKRADMLTKINVAEQVYNLGRTSIVKSAW 168
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 30.9 bits (70), Expect = 1.1
Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 28/153 (18%)
Query: 54 RSTNQDASIFVLEKRQLEKLDMKLREEYFTF--------VKRGVSQLTRLRHPQILIVQH 105
N+ ++ EK LEK + K + +T +++ L +
Sbjct: 51 EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEG 110
Query: 106 PLEESS-------------LANVLGHTENLPNPLPPHLRSYKLYDIEIKYGLMQVGEGLN 152
+ + + L + + IK + V +
Sbjct: 111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-----YTCFIPIQVIKCIIKSVLNSFS 165
Query: 153 FLHNDAKKIHHNLCPHNIIVSHHGAWKI--FGF 183
++HN+ H ++ P NI++ +G K+ FG
Sbjct: 166 YIHNEKNICHRDVKPSNILMDKNGRVKLSDFGE 198
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription;
1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A
1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A
3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A
3bct_A* 3ifq_A* 3sla_A 3sl9_A
Length = 529
Score = 30.9 bits (70), Expect = 1.2
Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 9/76 (11%)
Query: 394 VKSEVLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNAL-----LPRIKRLCIST 448
+PL + L S + IQ + + L L + A+ + L S
Sbjct: 457 RGLNTIPLFVQLLYSPIENIQRVAAGV---LCELAQDKEAAEAIEAEGATAPLTELLHSR 513
Query: 449 SHISVRVNCLVCLGKL 464
+ V L ++
Sbjct: 514 NE-GVATYAAAVLFRM 528
>3qy1_A Carbonic anhydrase; structural genomics, center for structural
genomics of infec diseases, csgid, lyase; 1.54A
{Salmonella enterica subsp} PDB: 1i6p_A 1i6o_A 1t75_A
2esf_A
Length = 223
Score = 30.5 bits (69), Expect = 1.3
Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Query: 388 LTPPEQVKSEVLPLLYRALESDSQQIQELC-LSILPSLANLIEYPAMKNAL 437
L + + LL + Q++ L L+++ + NL M++A
Sbjct: 123 LLHIRDIWLKHSSLL--GKMPEEQRLDALYELNVMEQVYNLGHSTIMQSAW 171
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 30.7 bits (69), Expect = 1.3
Identities = 40/330 (12%), Positives = 88/330 (26%), Gaps = 82/330 (24%)
Query: 28 TREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIF-----VLEKRQLEKLDMKLREEYF 82
++ + +G ++Y T+ N + V + + + +
Sbjct: 64 SKLVYVHHLLGEGAFA---QVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLM-- 118
Query: 83 TFVKRGVSQLTRLRHPQIL-------------IVQHPLEESSLANVLGHTENLPNPLPPH 129
+L + +V +L N + +N P + P
Sbjct: 119 -------ERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQ 171
Query: 130 LRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAW----------- 178
+ M++ + +H D + IH ++ P N I+ +
Sbjct: 172 --------GLVISFAMRMLYMIEQVH-DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGL 222
Query: 179 KIFGFDFSRELCLDPTRQL------TPAR---------------DMFSLGATI-CAVYNN 216
+ S ++ L P + T D F + AT+ C ++
Sbjct: 223 ALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGT 282
Query: 217 GKSIISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLK---S 273
+ + L + ++ +MLN + D L+
Sbjct: 283 YMKVKNEGGECKPEGLFRRLPHLDMWNEF-------FHVMLNIPDCHHLPSLDLLRQKLK 335
Query: 274 PYFDDIGVKTLNYLDSIFQWDNLEKSKFYK 303
F + L + LE + K
Sbjct: 336 KVFQQHYTNKIRALRNRLIVLLLECKRSRK 365
>2d4y_A HAP1, flagellar HOOK-associated protein 1; multi-domain protein,
alpha-helical bundle, complex all- beta folds,
structural protein; 2.10A {Salmonella typhimurium}
Length = 463
Score = 30.7 bits (68), Expect = 1.4
Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 526 LVIENSLSL-NQFNSLVAVIKDMVNRVEAEHRTKLEQLNSIAQE 568
+I + L NQF + ++D +V + + Q+N+ A++
Sbjct: 68 ALIGKAEGLVNQFKTTDQYLRDQDKQVNIAIGSSVAQINNYAKQ 111
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 30.4 bits (69), Expect = 1.4
Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 16 NQISSVLPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDM 75
+++ P+ +Y + +GS G G +YSG + S N +I +EK +++
Sbjct: 30 TKLAPGKEKEPLESQYQVGPLLGSGGFG---SVYSGIRVSDNLPVAIKHVEK---DRISD 83
Query: 76 KLREEYFTFVKRGVSQLTRLRHPQILIVQ 104
T V V L ++ +++
Sbjct: 84 WGELPNGTRVPMEVVLLKKVSSGFSGVIR 112
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.30A {Geobacter metallireducens}
Length = 358
Score = 30.4 bits (69), Expect = 1.5
Identities = 20/85 (23%), Positives = 27/85 (31%), Gaps = 24/85 (28%)
Query: 140 IKYGLMQV-GEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPTRQLT 198
I+YGLM EGLN LH+ + + + D
Sbjct: 216 IEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRYDLDL------------- 262
Query: 199 PARDMFSLGATICAVYNNGKSIISS 223
A I V+ G S+ISS
Sbjct: 263 ---------ADITEVWRRG-SVISS 277
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 30.4 bits (69), Expect = 1.5
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 10/76 (13%)
Query: 26 PVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFV 85
Y+I +G G ++ R T Q+ ++ V+ K + D +
Sbjct: 19 TFAERYNIVCMLGKGSFG---EVLKCKDRITQQEYAVKVINKASAKNKDTST-------I 68
Query: 86 KRGVSQLTRLRHPQIL 101
R V L +L HP I+
Sbjct: 69 LREVELLKKLDHPNIM 84
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 30.6 bits (69), Expect = 1.5
Identities = 50/291 (17%), Positives = 98/291 (33%), Gaps = 74/291 (25%)
Query: 26 PVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFV 85
V YDI +G+ G ++ T+R+T + + + + +E
Sbjct: 154 HVLDHYDIHEELGTGAFG---VVHRVTERATGNNFAAKFVMTPHESDKETVRKE------ 204
Query: 86 KRGVSQLTRLRHPQILIVQHPLEESSLANVLGHTENLPNPLPPHL--------------- 130
+ ++ LRHP ++ +L + + +
Sbjct: 205 ---IQTMSVLRHPTLV---------NLHDAFEDDNEM------VMIYEFMSGGELFEKVA 246
Query: 131 -RSYKLYDIEIKYGLMQVGEGLNFLHNDAKKI-HHNLCPHNIIVSHHG--AWKIFGFDFS 186
K+ + E + QV +GL +H H +L P NI+ + K+ F +
Sbjct: 247 DEHNKMSEDEAVEYMRQVCKGLCHMHE--NNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
Query: 187 RELCLDPTRQLT--------------------PARDMFSLGATICAVYNNGKS-IISSDQ 225
L DP + + DM+S+G + + +G S +
Sbjct: 305 AHL--DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG-VLSYILLSGLSPFGGEND 361
Query: 226 NITFSELGSANIN--SARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSP 274
+ T + S + N + S I E ++ ++ +L P R H L+ P
Sbjct: 362 DETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP 412
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 30.5 bits (69), Expect = 1.6
Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 14/84 (16%)
Query: 102 IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKI 161
++ + ++ L VL +P I + Q+ + F+H+
Sbjct: 115 VIMEYVPDT-LHKVLKSFIRSGRSIP---------MNLISIYIYQLFRAVGFIHS-LGIC 163
Query: 162 HHNLCPHNIIV-SHHGAWKI--FG 182
H ++ P N++V S K+ FG
Sbjct: 164 HRDIKPQNLLVNSKDNTLKLCDFG 187
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 30.3 bits (69), Expect = 1.6
Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 29/105 (27%)
Query: 93 TRLRHPQIL-------------IVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDIE 139
RL+ P ++ + + LA +L PL P +
Sbjct: 89 GRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQG----PLAPPRA------VA 138
Query: 140 IKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FG 182
I + Q+G L+ H A H ++ P NI+VS + FG
Sbjct: 139 I---VRQIGSALDAAH-AAGATHRDVKPENILVSADDFAYLVDFG 179
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell
cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A
3au3_A 3qhe_A
Length = 354
Score = 30.2 bits (68), Expect = 2.1
Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 399 LPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNAL-----LPRIKRLCISTSHISV 453
+ L L+S+S+ +Q++ S+L +L+ + K L + + + S
Sbjct: 129 MRALVAQLKSESEDLQQVIASVLRNLSWRAD-VNSKKTLREVGSVKALMECALEVKKEST 187
Query: 454 RVNCLVCLGKL 464
+ L L L
Sbjct: 188 LKSVLSALWNL 198
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 30.1 bits (68), Expect = 2.3
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Query: 23 PGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEK----LDMKLR 78
+ Y +GS G ++ +++ + + +I V++K Q +K D K
Sbjct: 30 KEGKIGESYFKVRKLGSGAYG---EVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNI 86
Query: 79 EEYFTFVKRGVSQLTRLRHPQI 100
E++ + +S L L HP I
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNI 108
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis,
clathrin adaptor, transport, coated PITS; 4.0A {Mus
musculus} SCOP: i.23.1.1
Length = 618
Score = 29.9 bits (67), Expect = 2.4
Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 18/110 (16%)
Query: 395 KSEVLPL----LYRALESDSQQIQELCLSILPSLANLIEYPAMKNALLPRIKRLCISTSH 450
+ +V L + L +Q +Q L L L + + M L +++ + TS+
Sbjct: 101 RQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGS----SEMCRDLAGEVEK-LLKTSN 155
Query: 451 ISVRVNCLVCLGKLIEYLDKWLVLDEVLPFLPQIPS----RDPAVLMGIL 496
+R +C +I V + + FLP + ++ VL +
Sbjct: 156 SYLRKKAALCAVHVIR-----KVPELMEMFLPATKNLLNEKNHGVLHTSV 200
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats,
cell adhesion-CE complex; 3.01A {Homo sapiens}
Length = 458
Score = 29.9 bits (67), Expect = 2.4
Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Query: 399 LPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNAL-----LPRIKRLCISTSHISV 453
+ L L+S+S+ +Q++ S+L +L+ + K L + + + S
Sbjct: 245 MRALVAQLKSESEDLQQVIASVLRNLSWRAD-VNSKKTLREVGSVKALMECALEVKKEST 303
Query: 454 RVNCLVCLGKL 464
+ L L L
Sbjct: 304 LKSVLSALWNL 314
Score = 28.8 bits (64), Expect = 6.0
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 8/76 (10%)
Query: 394 VKSEVLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNAL-----LPRIKRLCIST 448
++ L L + L+S S I L +L+ P + AL + +K L I +
Sbjct: 376 RENNCLQTLLQHLKSHSLTIVSNACGTLWNLSA--RNPKDQEALWDMGAVSMLKNL-IHS 432
Query: 449 SHISVRVNCLVCLGKL 464
H + + L L
Sbjct: 433 KHKMIAMGSAAALRNL 448
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein
structure initiative, northeast structural genomics
consortium, NESG; 2.10A {Escherichia coli} SCOP:
a.118.1.16
Length = 280
Score = 29.8 bits (67), Expect = 2.5
Identities = 4/85 (4%), Positives = 25/85 (29%), Gaps = 5/85 (5%)
Query: 397 EVLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNALLPRIKRLCISTSHISVRVN 456
+ + L + +++ L + ++ + + + ++ VR
Sbjct: 54 DAVRLAIEFCSDKNYIRRDIGAF---ILGQIKICKKCEDNVFNILNNMALNDKSACVRAT 110
Query: 457 CLVCLGKLIEYLDKWLVLDEVLPFL 481
+ + + + +++
Sbjct: 111 AIESTAQRCK--KNPIYSPKIVEQS 133
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase
inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB:
3uck_A 3ucm_A 3ucn_A 3uco_A
Length = 227
Score = 29.3 bits (66), Expect = 2.7
Identities = 7/51 (13%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Query: 388 LTPPEQVKSEVLPLLYRALESDSQQIQELC-LSILPSLANLIEYPAMKNAL 437
++ +V+ + L S ++ L++ + N+ P ++ A
Sbjct: 127 ISDVREVRDKNAAKL--HGLSADDAWDKMVELNVEAQVFNVCASPIVQAAW 175
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 29.6 bits (67), Expect = 3.0
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 20 SVLPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLRE 79
SV P + EY ++ +GS G ++ +R T + +I ++ KR+ + +
Sbjct: 2 SVYPKA-LRDEYIMSKTLGSGACG---EVKLAFERKTCKKVAIKIISKRKFAIGSAREAD 57
Query: 80 EYFTFVKRGVSQLTRLRHPQIL 101
V+ + L +L HP I+
Sbjct: 58 PALN-VETEIEILKKLNHPCII 78
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio
rerio}
Length = 780
Score = 29.6 bits (66), Expect = 3.0
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 9/78 (11%)
Query: 394 VKSEVLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNAL-----LPRIKRLCIST 448
+PL + L S + IQ + + L L + A+ + L S
Sbjct: 590 RGLNTIPLFVQLLYSPIENIQRVAAGV---LCELAQDKEAAEAIEAEGATAPLTELLHSR 646
Query: 449 SHISVRVNCLVCLGKLIE 466
+ V L ++ E
Sbjct: 647 NE-GVATYAAAVLFRMSE 663
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 29.5 bits (67), Expect = 3.1
Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 130 LRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSREL 189
+ + L D I+Y + Q + LH + IH +L P N++++ + K+ F +R +
Sbjct: 104 ISTQMLSDDHIQYFIYQTLRAVKVLHG-SNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
Query: 190 CLDPTRQLTPARDMFSL 206
P +
Sbjct: 163 DESAADNSEPTGQQSGM 179
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 29.7 bits (67), Expect = 3.4
Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 10/79 (12%)
Query: 23 PGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYF 82
++ Y +GS G ++ + T+ + +I ++ K +
Sbjct: 31 KKGHLSEMYQRVKKLGSGAYG---EVLLCRDKVTHVERAIKIIRKTSVSTSSNSK----- 82
Query: 83 TFVKRGVSQLTRLRHPQIL 101
+ V+ L L HP I+
Sbjct: 83 --LLEEVAVLKLLDHPNIM 99
Score = 29.3 bits (66), Expect = 4.4
Identities = 11/60 (18%), Positives = 28/60 (46%)
Query: 243 SDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYFDDIGVKTLNYLDSIFQWDNLEKSKFY 302
++ EG ++L+K ML + R L+ P+ ++ K + ++ + +E + +
Sbjct: 262 KNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKF 321
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 29.1 bits (66), Expect = 3.4
Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 9/60 (15%)
Query: 41 GQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVKRGVSQLTRLRHPQI 100
G+G ++ ++ T + + K +E +D +E + + L HP I
Sbjct: 18 GRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQE---------IEIMKSLDHPNI 68
>2loe_A 6-cysteine protein, putative; malaria, membrane protein; NMR
{Plasmodium falciparum 3D7}
Length = 127
Score = 28.2 bits (62), Expect = 3.6
Identities = 18/114 (15%), Positives = 36/114 (31%), Gaps = 8/114 (7%)
Query: 211 CAVYNNGKSIISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDF 270
C + +I S +I S+N + + +L+ ++ + P + F
Sbjct: 6 CDFTTSESTIFSKGYSINEISNKSSNNQQDIVCTVKAHANDLIGFKCPSNYSVEPHDC-F 64
Query: 271 LKSPYFDDIGVKTLNYLDSIFQWDNLEKSKFYKGLPQIMEKLPHRINTNRILPC 324
+ + N L + + FY +LP I+ N C
Sbjct: 65 VSAFNLSGKNENLENKLKLTNIIMDHYNNTFYS-------RLPSLISDNWKFFC 111
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 29.1 bits (66), Expect = 3.7
Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 20 SVLPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLRE 79
+V V YD +GS + ++ST + ++KR+ + +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFA---VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSR 58
Query: 80 EYFTFVKRGVSQLTRLRHPQIL 101
E ++R VS L ++HP ++
Sbjct: 59 E---DIEREVSILKEIQHPNVI 77
>3bon_A Neurotoxin A; metalloprotease; 1.20A {Clostridium botulinum} SCOP:
d.92.1.7 PDB: 3bok_A 3boo_A 2ilp_A* 2ima_A* 2imb_A*
2imc_A 2w2d_A 3c8b_A 3bwi_A 3c88_A 3c89_A 3c8a_A 3qiz_A*
3qix_A* 3qiy_A* 3qj0_A* 3dda_A 3ddb_A 3qw5_A* 3qw6_A ...
Length = 425
Score = 29.4 bits (65), Expect = 4.0
Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 9/74 (12%)
Query: 264 RPDNHDFLKSPYFDDIGVKTLNYLDSIFQWDNLEKSKFYKGLPQIMEKLPHRINTNRILP 323
P+ D P + V Y DS + + EK + KG + KL RI + +
Sbjct: 53 NPEEGDLNPPPEAKQVPVS---YYDSTYLSTDNEKDNYLKG----VTKLFERIYSTDLGR 105
Query: 324 CLMKEFINSSMVPF 337
L+ + +PF
Sbjct: 106 MLLTSIVRG--IPF 117
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside
phosphotransferase, antibiotic resistance; HET: MES PG4;
1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A*
3q2m_A*
Length = 339
Score = 29.3 bits (65), Expect = 4.1
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Query: 161 IHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPTRQLTPARDMFSLGATICAVYN 215
H ++ N++V + + I +D E L P RD+ +G + V+N
Sbjct: 209 CHSDIHAGNVLVGNEESIYIIDWD---EPMLAP-----KERDLMFIGGGVGNVWN 255
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 29.2 bits (66), Expect = 4.1
Identities = 31/162 (19%), Positives = 57/162 (35%), Gaps = 33/162 (20%)
Query: 27 VTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASI--FVLEKRQLEKLDMK--LREEYF 82
+ Y +G G GL++ S ++ +I VL +K LRE
Sbjct: 9 LGSRYMDLKPLGCGGNGLVF---SAVDNDCDKRVAIKKIVLTD----PQSVKHALRE--- 58
Query: 83 TFVKRGVSQLTRLRHP---QILIVQHPLEESSLANVLGH---------TENLPNPLPPHL 130
+ + RL H ++ + P +V E + L L
Sbjct: 59 ------IKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL 112
Query: 131 RSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIV 172
L + + + Q+ GL ++H+ A +H +L P N+ +
Sbjct: 113 EQGPLLEEHARLFMYQLLRGLKYIHS-ANVLHRDLKPANLFI 153
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A
{Cryptococcus neoformans} PDB: 2w3n_A
Length = 243
Score = 28.7 bits (64), Expect = 4.8
Identities = 4/32 (12%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 407 ESDSQQIQELC-LSILPSLANLIEYPAMKNAL 437
+ + +L ++ ++ N++ P ++ A
Sbjct: 167 LPEGSDVNDLIKENVKMAVKNVVNSPTIQGAW 198
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator,
alternative splicing, cell adhesion, cytoplasm,
cytoskeleton, disease mutation, nucleus; 2.20A {Homo
sapiens}
Length = 644
Score = 29.1 bits (65), Expect = 4.9
Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Query: 394 VKSEVLPLLYRALESDSQQIQELCLSILPSLANLIEYPAMKNAL-----LPRIKRLCIST 448
+PL + L S + IQ + + L L + A+ + L + +
Sbjct: 454 RGLNTIPLFVQLLYSPIENIQRVAAGV---LCELAQDKEAAEAIEAEGATAPLTEL-LHS 509
Query: 449 SHISVRVNCLVCLGKL 464
+ V L ++
Sbjct: 510 RNEGVATYAAAVLFRM 525
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 28.8 bits (65), Expect = 5.2
Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 12/76 (15%)
Query: 27 VTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLD-MKLREEYFTFV 85
T EY + +G +G + K Q+ + ++ ++L D KL E
Sbjct: 9 FTEEYQLFEELG---KGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLERE----- 60
Query: 86 KRGVSQLTRLRHPQIL 101
L+HP I+
Sbjct: 61 ---ARICRLLKHPNIV 73
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 29.0 bits (65), Expect = 5.2
Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 15/86 (17%)
Query: 117 GHTENLPNPLPPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVS--- 173
P LP +K L Q+ +G+++LH +H +L P NI+V
Sbjct: 116 SKANKKPVQLPRG---------MVKSLLYQILDGIHYLH-ANWVLHRDLKPANILVMGEG 165
Query: 174 -HHGAWKIFGFDFSRELCLDPTRQLT 198
G KI F+R P + L
Sbjct: 166 PERGRVKIADMGFARLFN-SPLKPLA 190
Score = 28.6 bits (64), Expect = 6.5
Identities = 9/61 (14%), Positives = 22/61 (36%)
Query: 218 KSIISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDFLKSPYFD 277
+++ + T++ D L++ +L P R + ++ PYF
Sbjct: 279 STLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFL 338
Query: 278 D 278
+
Sbjct: 339 E 339
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange,
lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1
Length = 221
Score = 28.6 bits (64), Expect = 5.3
Identities = 7/31 (22%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Query: 408 SDSQQIQELC-LSILPSLANLIEYPAMKNAL 437
++ ++ SL NL+ YP ++ L
Sbjct: 157 PFAELCTHCEKEAVNASLGNLLTYPFVREGL 187
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 28.9 bits (65), Expect = 5.4
Identities = 62/313 (19%), Positives = 106/313 (33%), Gaps = 78/313 (24%)
Query: 20 SVLPGNPVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLRE 79
SV P + EY ++ +GS G ++ +R T + +I ++ KR+ + +
Sbjct: 127 SVYPKA-LRDEYIMSKTLGSGACG---EVKLAFERKTCKKVAIRIISKRKFAIGSAREAD 182
Query: 80 EYFTFVKRGVSQLTRLRHPQILIVQHPLEESSLANVL---------------GH-TENLP 123
V+ + L +L HP I+ +++ + VL E
Sbjct: 183 PALN-VETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEA-- 239
Query: 124 NPLPPHLRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHG---AWKI 180
K Q+ + +LH + IH +L P N+++S KI
Sbjct: 240 ---------------TCKLYFYQMLLAVQYLH-ENGIIHRDLKPENVLLSSQEEDCLIKI 283
Query: 181 --FGF-------DFSRELCLDPT------------RQLTPARDMFSLG----ATICAV-- 213
FG R LC PT A D +SLG +
Sbjct: 284 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
Query: 214 ---YNNGKSIISSDQNITFSELGSANINSARLSDIDEGLRELVKMMLNTSPELRPDNHDF 270
+ S+ IT G N +++ E +LVK +L P+ R +
Sbjct: 344 FSEHRTQVSLK---DQIT---SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 397
Query: 271 LKSPYFDDIGVKT 283
L+ P+ D +K
Sbjct: 398 LRHPWLQDEDMKR 410
>3end_A Light-independent protochlorophyllide reductase iron-sulfur
ATP-binding protein; BCHL, electron donor, DPOR, Fe
protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter
sphaeroides 2} PDB: 3fwy_A*
Length = 307
Score = 28.6 bits (64), Expect = 5.7
Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 14/78 (17%)
Query: 161 IHHNLCPHNIIVSHHGAWKIFGFDFSRELCLDPTRQLTPARDMFSLGATICAVYNN---G 217
+HH+ H HHG + + Q+ GA + AVY G
Sbjct: 1 MHHH---H----HHHGMGSPKDLTIPTGADGEGSVQVHLDEADKITGAKVFAVYGKGGIG 53
Query: 218 KSIISSDQNIT--FSELG 233
KS S N++ FS LG
Sbjct: 54 KSTTS--SNLSAAFSILG 69
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 28.7 bits (65), Expect = 5.7
Identities = 9/75 (12%), Positives = 29/75 (38%), Gaps = 12/75 (16%)
Query: 27 VTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVK 86
+ + + +G G +++ +R T + ++ ++K + E
Sbjct: 7 IRKTFIFMEVLG---SGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENE------- 56
Query: 87 RGVSQLTRLRHPQIL 101
++ L +++H I+
Sbjct: 57 --IAVLKKIKHENIV 69
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 28.5 bits (64), Expect = 6.4
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 26 PVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFV 85
V YDI +GS + ++ST + + ++KRQ + E +
Sbjct: 9 KVEDFYDIGEELGSGQFA---IVKKCREKSTGLEYAAKFIKKRQSRASRRGVCRE---EI 62
Query: 86 KRGVSQLTRLRHPQIL 101
+R VS L ++ HP I+
Sbjct: 63 EREVSILRQVLHPNII 78
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 28.4 bits (64), Expect = 6.5
Identities = 12/75 (16%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query: 27 VTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVK 86
+ YD+ +G +G + ++T + + ++ ++L D + ++
Sbjct: 27 FSDNYDVKEELG---KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-------LE 76
Query: 87 RGVSQLTRLRHPQIL 101
R +L+HP I+
Sbjct: 77 REARICRKLQHPNIV 91
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 28.5 bits (64), Expect = 6.6
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 140 IKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHH 175
+K Q+ GL+++H IH ++ P N+++
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV 168
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 28.6 bits (64), Expect = 6.9
Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 25/111 (22%)
Query: 92 LTRLRHPQI-------------LIVQHPLEESSLANVLGHTENLPNPLPPHLRSYKLYDI 138
+ ++HP + I+ + +L + L + + L +
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN------RQEVSAVVLLYM 323
Query: 139 EIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKIFGFDFSREL 189
Q+ + +L IH NL N +V + K+ F SR +
Sbjct: 324 -----ATQISSAMEYLE-KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM 368
>2q83_A YTAA protein; 2635576, structural genomics, joint center for
structu genomics, JCSG, protein structure initiative,
PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus
subtilis}
Length = 346
Score = 28.4 bits (63), Expect = 7.1
Identities = 3/27 (11%), Positives = 8/27 (29%)
Query: 161 IHHNLCPHNIIVSHHGAWKIFGFDFSR 187
H + N ++ + + D
Sbjct: 225 CHQDYGTGNTLLGENEQIWVIDLDTVS 251
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 28.3 bits (64), Expect = 7.4
Identities = 12/75 (16%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query: 27 VTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFVK 86
+ YD+ +G +G + ++T + + ++ ++L D + ++
Sbjct: 4 FSDNYDVKEELG---KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-------LE 53
Query: 87 RGVSQLTRLRHPQIL 101
R +L+HP I+
Sbjct: 54 REARICRKLQHPNIV 68
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 28.0 bits (63), Expect = 7.8
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 10/76 (13%)
Query: 26 PVTREYDITGHIGSAGQGLLWKIYSGTKRSTNQDASIFVLEKRQLEKLDMKLREEYFTFV 85
Y+I +G +G ++ R T Q+ ++ V+ K + D +
Sbjct: 19 TFAERYNIVCMLG---KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST-------I 68
Query: 86 KRGVSQLTRLRHPQIL 101
R V L +L HP I+
Sbjct: 69 LREVELLKKLDHPNIM 84
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 28.1 bits (63), Expect = 8.5
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 130 LRSYKLYDIEIKYGLMQVGEGLNFLHNDAKKIHHNLCPHNIIVSHHGAWKI--FG 182
+R+ L + +Y + Q+ + + +LH +H ++ P NI+++ K+ FG
Sbjct: 101 IRANILEPVHKQYVVYQLIKVIKYLH-SGGLLHRDMKPSNILLNAECHVKVADFG 154
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.321 0.137 0.401
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 8,534,067
Number of extensions: 521270
Number of successful extensions: 1297
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1197
Number of HSP's successfully gapped: 255
Length of query: 570
Length of database: 6,701,793
Length adjustment: 99
Effective length of query: 471
Effective length of database: 3,937,614
Effective search space: 1854616194
Effective search space used: 1854616194
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.0 bits)