RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12793
(352 letters)
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel
{Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 96
Score = 90.8 bits (225), Expect = 2e-23
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPSP- 125
VR Y+ +D +P I+F+ D L + K +++WW R G IPSP
Sbjct: 23 AVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPV 82
Query: 126 ELQEWRTA 133
+L+ R
Sbjct: 83 KLENMRLQ 90
Score = 48.4 bits (115), Expect = 4e-08
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 232 QIISKDDHNWWQARKDNVAGSAGLIPSP-ELQEWRTA 267
+ K +++WW R G IPSP +L+ R
Sbjct: 54 HVKEKFNNDWWIGRLVKEGCEIGFIPSPVKLENMRLQ 90
>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 136
Score = 90.1 bits (223), Expect = 1e-22
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 65 QIFVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
VR +Y + D+ P +G+ F+ D L I K ++WW R G IPS
Sbjct: 23 AFAVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPS 82
Query: 125 P-ELQEWRTA 133
P L+ R
Sbjct: 83 PQRLESIRLK 92
Score = 47.7 bits (113), Expect = 2e-07
Identities = 17/76 (22%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPSP-ELQEWRTACSTIDKTKHEQGIYSSFSLPF 288
I K ++WW R G IPSP L+ R + + SL
Sbjct: 54 FLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQRLESIRLKQEQKARRSG-----NPSSLSD 108
Query: 289 SVYRRDTTRSPRSDEE 304
RR S ++
Sbjct: 109 IGNRRSPPPSLAKQKQ 124
>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 145
Score = 87.1 bits (215), Expect = 2e-21
Identities = 18/75 (24%), Positives = 30/75 (40%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPSPE 126
V+ +Y D+ +P + ++F D L I K +++WW R G IPSP
Sbjct: 25 AVKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPL 84
Query: 127 LQEWRTACSTIDKTK 141
E + +
Sbjct: 85 RLENIRIQQEQKRKR 99
Score = 47.8 bits (113), Expect = 2e-07
Identities = 15/72 (20%), Positives = 20/72 (27%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPSPELQEWRTACSTIDKTKHEQGIYSSFSLPFS 289
I K +++WW R G IPSP E + + G S S
Sbjct: 54 FLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLRLENIRIQQEQKRKRFHGGKSSGNSSSSL 113
Query: 290 VYRRDTTRSPRS 301
T
Sbjct: 114 GEMVSGTFRATP 125
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 96
Score = 67.8 bits (165), Expect = 6e-15
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARK---DNVAGSAGLIP 123
++RA F+Y+ D ++F+ GD+L +I D WWQAR+ D+ G IP
Sbjct: 3 YIRALFDYDKTKDCGFLSQ--ALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIP 60
Query: 124 SPELQEWR 131
S E R
Sbjct: 61 SKRRVERR 68
Score = 40.9 bits (95), Expect = 2e-05
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 230 MFQIISKDDHNWWQARK---DNVAGSAGLIPSPELQEWR 265
+ +I D WWQAR+ D+ G IPS E R
Sbjct: 30 VLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERR 68
>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 57
Score = 55.9 bits (135), Expect = 3e-11
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPSPE 126
+VRA F++N D++ +P F+ GDIL+I K + WW A G G+IP P
Sbjct: 3 YVRALFDFNGNDEEDLP-------FKKGDILRIRDKPEEQWWNAEDSE--GKRGMIPVPY 53
Query: 127 LQEW 130
++++
Sbjct: 54 VEKY 57
Score = 35.4 bits (82), Expect = 5e-04
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPSPELQEW 264
+ +I K + WW A G G+IP P ++++
Sbjct: 25 ILRIRDKPEEQWWNAEDSE--GKRGMIPVPYVEKY 57
>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Caenorhabditis
elegans, SEM-5 [TaxId: 6239]}
Length = 58
Score = 50.4 bits (121), Expect = 3e-09
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 10/58 (17%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
FV+A F++NP + +AF+ GD++ +I+KDD NWW+ + + G+ PS
Sbjct: 4 FVQALFDFNPQESG-------ELAFKRGDVITLINKDDPNWWEGQLN---NRRGIFPS 51
Score = 30.0 bits (68), Expect = 0.050
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPS 258
+ +I+KDD NWW+ + + G+ PS
Sbjct: 26 VITLINKDDPNWWEGQLN---NRRGIFPS 51
>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 67
Score = 50.6 bits (121), Expect = 4e-09
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPSPEL 127
V A ++Y P++ + + + GD I+ + + WW+AR N G G IPS +
Sbjct: 11 VVALYDYMPMNAN-------DLQLRKGDEYFILEESNLPWWRARDKN--GQEGYIPSNYV 61
Query: 128 QE 129
E
Sbjct: 62 TE 63
Score = 32.1 bits (73), Expect = 0.012
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPSPELQE 263
+ I+ + + WW+AR N G G IPS + E
Sbjct: 32 EYFILEESNLPWWRARDKN--GQEGYIPSNYVTE 63
>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 50.1 bits (120), Expect = 4e-09
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 10/58 (17%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
+V+A F+++P +D + F+ GD + ++ D NWW+ G G+ P
Sbjct: 3 YVQALFDFDPQEDG-------ELGFRRGDFIHVMDNSDPNWWKGACH---GQTGMFPR 50
Score = 29.7 bits (67), Expect = 0.062
Identities = 7/29 (24%), Positives = 11/29 (37%), Gaps = 3/29 (10%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPS 258
++ D NWW+ G G+ P
Sbjct: 25 FIHVMDNSDPNWWKGACH---GQTGMFPR 50
>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 76
Score = 50.2 bits (120), Expect = 6e-09
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Query: 65 QIFVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
Q+ V+A+FN+ ++D ++ GDI+ + ++ WW+ + G G PS
Sbjct: 10 QLIVKARFNFKQTNED-------ELSVCKGDIIYVTRVEEGGWWEGTLN---GRTGWFPS 59
Query: 125 PELQE 129
++E
Sbjct: 60 NYVRE 64
Score = 27.9 bits (62), Expect = 0.45
Identities = 7/34 (20%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPSPELQE 263
+ + ++ WW+ + G G PS ++E
Sbjct: 34 IIYVTRVEEGGWWEGTLN---GRTGWFPSNYVRE 64
>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 55
Score = 48.9 bits (117), Expect = 8e-09
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 10/63 (15%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPSPE 126
V A ++Y + + GDIL +++ + +WW+ + G +P+
Sbjct: 2 LVLALYDYQEKSPR-------EVTMKKGDILTLLNSTNKDWWKVEVN---DRQGFVPAAY 51
Query: 127 LQE 129
+++
Sbjct: 52 VKK 54
Score = 29.7 bits (67), Expect = 0.059
Identities = 4/34 (11%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPSPELQE 263
+ +++ + +WW+ + G +P+ +++
Sbjct: 24 ILTLLNSTNKDWWKVEVN---DRQGFVPAAYVKK 54
>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 58
Score = 47.7 bits (114), Expect = 2e-08
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 10/57 (17%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
VRA +++ ++D+ + F+ G+++ ++ D NWWQ GL PS
Sbjct: 5 VRALYDFEAVEDN-------ELTFKHGELITVLDDSDANWWQGENH---RGTGLFPS 51
Score = 29.3 bits (66), Expect = 0.088
Identities = 9/29 (31%), Positives = 12/29 (41%), Gaps = 3/29 (10%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPS 258
+ ++ D NWWQ GL PS
Sbjct: 26 LITVLDDSDANWWQGENH---RGTGLFPS 51
>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 47.8 bits (114), Expect = 3e-08
Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 10/62 (16%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPSPEL 127
V A F+Y + + FQ GDI+ ++SK + W + G G+ P +
Sbjct: 8 VEALFSYEATQPE-------DLEFQEGDIILVLSKVNEEWLEGESK---GKVGIFPKVFV 57
Query: 128 QE 129
++
Sbjct: 58 ED 59
Score = 29.7 bits (67), Expect = 0.079
Identities = 6/34 (17%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPSPELQE 263
+ ++SK + W + G G+ P +++
Sbjct: 29 IILVLSKVNEEWLEGESK---GKVGIFPKVFVED 59
>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 47.9 bits (114), Expect = 3e-08
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 9/63 (14%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPSPE 126
V A +++ + + + G I+ K+D +WW+AR GS G IPS
Sbjct: 4 IVVAMYDFQATEAH-------DLRLERGQEYIILEKNDLHWWRARDKY--GSEGYIPSNY 54
Query: 127 LQE 129
+
Sbjct: 55 VTG 57
Score = 30.2 bits (68), Expect = 0.061
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPSPELQE 263
+ I+ K+D +WW+AR GS G IPS +
Sbjct: 26 EYIILEKNDLHWWRARDKY--GSEGYIPSNYVTG 57
>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 47.5 bits (113), Expect = 4e-08
Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 9/65 (13%)
Query: 65 QIFVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
+ V+A F+Y +D + F I+Q + K + WW+ PS
Sbjct: 6 KCAVKALFDYKAQRED-------ELTFIKSAIIQNVEKQEGGWWRGDYGGKKQ--LWFPS 56
Query: 125 PELQE 129
++E
Sbjct: 57 NYVEE 61
Score = 28.6 bits (64), Expect = 0.22
Identities = 7/34 (20%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPSPELQE 263
+ Q + K + WW+ PS ++E
Sbjct: 30 IIQNVEKQEGGWWRGDYGGKKQ--LWFPSNYVEE 61
>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 47.0 bits (112), Expect = 4e-08
Identities = 12/58 (20%), Positives = 29/58 (50%), Gaps = 10/58 (17%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
+ RA +++ L++D + F+ G++++++ + +WW R GL P+
Sbjct: 3 WARALYDFEALEED-------ELGFRSGEVVEVLDSSNPSWWTGRLH---NKLGLFPA 50
Score = 27.4 bits (61), Expect = 0.41
Identities = 6/29 (20%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPS 258
+ +++ + +WW R GL P+
Sbjct: 25 VVEVLDSSNPSWWTGRLH---NKLGLFPA 50
>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 45.9 bits (109), Expect = 1e-07
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
+ A+++Y+ +D+ + F D + I D +WW + GS GL PS
Sbjct: 2 WATAEYDYDAAEDN-------ELTFVENDKIINIEFVDDDWWLGELEK-DGSKGLFPS 51
Score = 27.4 bits (61), Expect = 0.40
Identities = 10/29 (34%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPS 258
I D +WW + GS GL PS
Sbjct: 24 KIINIEFVDDDWWLGELEK-DGSKGLFPS 51
>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 98
Score = 46.5 bits (110), Expect = 2e-07
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 10/57 (17%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
V A ++Y ++D ++F G ++ +++KDD +WWQ + G GL PS
Sbjct: 37 VIAMYDYAANNED-------ELSFSKGQLINVMNKDDPDWWQGEIN---GVTGLFPS 83
Score = 28.7 bits (64), Expect = 0.35
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPS 258
+ +++KDD +WWQ + G GL PS
Sbjct: 58 LINVMNKDDPDWWQGEIN---GVTGLFPS 83
>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 60
Score = 44.7 bits (106), Expect = 3e-07
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
RA ++Y D D ++F+ GD + + D W G G++P+
Sbjct: 6 FRAMYDYMAADAD-------EVSFKDGDAIINVQAIDEGWMYGTVQR-TGRTGMLPA 54
Score = 27.4 bits (61), Expect = 0.50
Identities = 5/29 (17%), Positives = 9/29 (31%), Gaps = 1/29 (3%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPS 258
+ D W G G++P+
Sbjct: 27 AIINVQAIDEGWMYGTVQR-TGRTGMLPA 54
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus
[TaxId: 10090]}
Length = 53
Score = 44.1 bits (104), Expect = 4e-07
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 9/62 (14%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPSPEL 127
V A ++Y D +A + + ++ + +WW+ + N G G PS L
Sbjct: 1 VIALYDYQTNDPQ-------ELALRCDEEYYLLDSSEIHWWRVQDKN--GHEGYAPSSYL 51
Query: 128 QE 129
E
Sbjct: 52 VE 53
Score = 29.1 bits (65), Expect = 0.091
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPSPELQE 263
+ ++ + +WW+ + N G G PS L E
Sbjct: 22 EYYLLDSSEIHWWRVQDKN--GHEGYAPSSYLVE 53
>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 67
Score = 43.7 bits (103), Expect = 8e-07
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 13/63 (20%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDD-----HNWWQARKDNVAGSAGL 121
F RA +++ P + + +A + GD++ I+SK D +WW+ R N G+ G
Sbjct: 7 FARALYDFVPENPE------MEVALKKGDLMAILSKKDPLGRDSDWWKVRTKN--GNIGY 58
Query: 122 IPS 124
IP
Sbjct: 59 IPY 61
>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo
sapiens) [TaxId: 9606]}
Length = 65
Score = 43.3 bits (102), Expect = 1e-06
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 9/60 (15%)
Query: 65 QIFVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
+I V A ++Y + + ++FQ GD + ++ + W G IPS
Sbjct: 4 RIIVVALYDYEAIHHE-------DLSFQKGDQMVVLEESGEWWKARSLAT--RKEGYIPS 54
>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 64
Score = 43.2 bits (102), Expect = 1e-06
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Query: 63 ILQIFVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLI 122
++ FV A ++Y + ++F+ G+ LQI++ + +WW A G G I
Sbjct: 1 MVTTFV-ALYDYESRTET-------DLSFKKGERLQIVNNTEGDWWLAHS-LSTGQTGYI 51
Query: 123 PS 124
PS
Sbjct: 52 PS 53
Score = 27.4 bits (61), Expect = 0.52
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPS 258
QI++ + +WW A G G IPS
Sbjct: 26 RLQIVNNTEGDWWLAHS-LSTGQTGYIPS 53
>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 57
Score = 43.2 bits (102), Expect = 1e-06
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
A ++Y + +D ++F G+ QI++ + +WW+AR G G IPS
Sbjct: 3 FVALYDYEAITED-------DLSFHKGEKFQILNSSEGDWWEARS-LTTGETGYIPS 51
Score = 26.6 bits (59), Expect = 0.68
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPS 258
FQI++ + +WW+AR G G IPS
Sbjct: 24 KFQILNSSEGDWWEARS-LTTGETGYIPS 51
>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 71
Score = 42.9 bits (101), Expect = 2e-06
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISK-DDHNWWQARKDNVAGSAGLIPSPE 126
A++N++ + + F GD+L I++ D NW++A+ G G+IP+
Sbjct: 9 CIAKYNFHGTAEQ-------DLPFCKGDVLTIVAVTKDPNWYKAKNKV--GREGIIPANY 59
Query: 127 LQE 129
+Q+
Sbjct: 60 VQK 62
Score = 29.4 bits (66), Expect = 0.097
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 229 VMFQIISKDDHNWWQARKDNVAGSAGLIPSPELQE 263
V+ + D NW++A+ G G+IP+ +Q+
Sbjct: 30 VLTIVAVTKDPNWYKAKNKV--GREGIIPANYVQK 62
>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 71
Score = 42.9 bits (101), Expect = 2e-06
Identities = 11/60 (18%), Positives = 29/60 (48%), Gaps = 11/60 (18%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDH--NWWQARKDNVAGSAGLIPS 124
V+ + ++ + ++ + F+ G+ +++I K ++ WW+ + G GL+P
Sbjct: 8 VVQTLYPFSSVTEE-------ELNFEKGETMEVIEKPENDPEWWKCKNAR--GQVGLVPK 58
>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA
1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 72
Score = 42.5 bits (100), Expect = 2e-06
Identities = 10/57 (17%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
V+ F + ++ ++F GD+L ++ ++ + W + + + G PS
Sbjct: 10 VKTIFPHTAGNNK------TLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPS 60
Score = 26.0 bits (57), Expect = 2.0
Identities = 4/29 (13%), Positives = 13/29 (44%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPS 258
+ ++ ++ + W + + + G PS
Sbjct: 32 VLTLLIPEEKDGWLYGEHDTTKARGWFPS 60
>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 43.1 bits (101), Expect = 5e-06
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 10/62 (16%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPSPEL 127
A Y ++ D ++ G+ +++I K WW RKD G PS L
Sbjct: 17 YVAIKAYTAVEGD-------EVSLLEGEAVEVIHKLLDGWWVIRKD---DVTGYFPSMYL 66
Query: 128 QE 129
Q+
Sbjct: 67 QK 68
Score = 30.8 bits (69), Expect = 0.084
Identities = 18/78 (23%), Positives = 26/78 (33%), Gaps = 13/78 (16%)
Query: 230 MFQIISKDDHNWWQARKDNVAGSAGLIPSPELQEWRTACSTIDKTKHEQGIYSSFSLPFS 289
++I K WW RKD G PS LQ+ + + P
Sbjct: 38 AVEVIHKLLDGWWVIRKD---DVTGYFPSMYLQK-------SGQDVSQAQRQIKRGAPP- 86
Query: 290 VYRRDTTRSPRSDEENGR 307
RR + R+ S + R
Sbjct: 87 --RRSSIRNAHSIHQRSR 102
>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 63
Score = 41.3 bits (97), Expect = 5e-06
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 13/60 (21%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHN---WWQARKDNVAGSAGLIPS 124
+ A ++Y P +DD + + GD + II ++D + WW AR + G +P
Sbjct: 7 IYALWDYEPQNDD-------ELPMKEGDCMTIIHREDEDEIEWWWARLN---DKEGYVPR 56
>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 72
Score = 41.4 bits (97), Expect = 5e-06
Identities = 11/57 (19%), Positives = 17/57 (29%), Gaps = 9/57 (15%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
+A + D ++F G + + W N G GLIP
Sbjct: 13 AKALYACKAEHDS-------ELSFTAGTVFDNVHPSQEPGWLEGTLN--GKTGLIPE 60
>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 41.0 bits (96), Expect = 7e-06
Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 9/63 (14%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPSPE 126
V A +Y P D + F+ G+ L+I+ + W G G IP
Sbjct: 8 LVIALHSYEPSHDG-------DLGFEKGEQLRILEQSGEWWKAQSLTT--GQEGFIPFNF 58
Query: 127 LQE 129
+ +
Sbjct: 59 VAK 61
>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 96
Score = 42.0 bits (98), Expect = 7e-06
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPSPE 126
A+++YNP D +A + G L + D + + + + G GL+PS
Sbjct: 19 LCVARYSYNPFDG-PNENPEAELPLTAGKYLYVYGDMDEDGFYEGE-LLDGQRGLVPSNF 76
Query: 127 LQE 129
+
Sbjct: 77 VDF 79
>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 74
Score = 40.6 bits (95), Expect = 1e-05
Identities = 8/62 (12%), Positives = 22/62 (35%), Gaps = 11/62 (17%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPSPEL 127
+A ++ D+ + F DI+ ++ + ++ W+ G P +
Sbjct: 13 AQALCSWTAKKDN-------HLNFSKHDIITVLEQQENWWFGEVHGGR----GWFPKSYV 61
Query: 128 QE 129
+
Sbjct: 62 KI 63
>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 69
Score = 40.5 bits (95), Expect = 1e-05
Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 11/57 (19%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
A + Y+ ++ + F G+ + + KD WW +G+ PS
Sbjct: 11 YIALYPYSSVEPG-------DLTFTEGEEILVTQKDG-EWWTGSIG---DRSGIFPS 56
>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 39.7 bits (93), Expect = 2e-05
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 11/58 (18%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIIS-KDDHNWWQARKDNVAGSAGLIPS 124
A++++ DD + F+ GDIL++++ + D NW++A + G G IP
Sbjct: 3 AIAKYDFKATADDELS-------FKRGDILKVLNEECDQNWYKAELN---GKDGFIPK 50
Score = 27.0 bits (60), Expect = 0.55
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 229 VMFQIISKDDHNWWQARKDNVAGSAGLIPS 258
++ + + D NW++A + G G IP
Sbjct: 24 ILKVLNEECDQNWYKAELN---GKDGFIPK 50
>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 80
Score = 39.9 bits (93), Expect = 2e-05
Identities = 9/65 (13%), Positives = 20/65 (30%), Gaps = 9/65 (13%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKD--NVAGSAGLIPS 124
+ Y + ++ G ++ I+ K+ WWQ G P+
Sbjct: 9 IAQVTSAYVASGSE-------QLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPA 61
Query: 125 PELQE 129
++
Sbjct: 62 SHVKL 66
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 41.8 bits (97), Expect = 3e-05
Identities = 29/34 (85%), Positives = 32/34 (94%)
Query: 188 RKTLVLLGAHGVGRRHIKNTLINKFPDKYAYPVP 221
RKTLVLLGAHGVGRRHIKNTLI K PD++AYP+P
Sbjct: 3 RKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIP 36
Score = 33.3 bits (75), Expect = 0.023
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 273 KTKHEQGIYSSFSLPFSVYRRDTTRSPRSDEENGRAYYFISHDEMMSDIAANQYLEYGK 331
+ + + + F+ TTR P+ DEENG+ YYF+SHD+MM DI+ N+YLEYG
Sbjct: 16 RRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNEYLEYGS 74
>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 74
Score = 39.0 bits (90), Expect = 5e-05
Identities = 9/65 (13%), Positives = 23/65 (35%), Gaps = 10/65 (15%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVA---GSAGLIPS 124
+ +Y L ++ I G+++Q+++ + N + + G +P
Sbjct: 10 MTVIKDYYALKEN-------EICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPG 62
Query: 125 PELQE 129
L
Sbjct: 63 SILAP 67
Score = 27.8 bits (61), Expect = 0.46
Identities = 5/37 (13%), Positives = 13/37 (35%), Gaps = 3/37 (8%)
Query: 230 MFQIISKDDHNWWQARKDNVA---GSAGLIPSPELQE 263
+ Q+++ + N + + G +P L
Sbjct: 31 VVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILAP 67
>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 38.2 bits (89), Expect = 6e-05
Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 12/59 (20%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHN--WWQARKDNVAGSAGLIPS 124
A +++ + + F+ GD++ I+ K D WW R + G G+ P+
Sbjct: 4 AVALYSFAGEESG-------DLPFRKGDVITILKKSDSQNDWWTGRVN---GREGIFPA 52
>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 37.6 bits (87), Expect = 1e-04
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 11/67 (16%)
Query: 63 ILQIFVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLI 122
ILQ + RA +Y +A GD+++++ K + WW + G I
Sbjct: 1 ILQTY-RAIADYEKTSGS-------EMALSTGDVVEVVEKSESGWWFCQMK---AKRGWI 49
Query: 123 PSPELQE 129
P+ L+
Sbjct: 50 PASFLEP 56
>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 57
Score = 37.0 bits (86), Expect = 1e-04
Identities = 8/57 (14%), Positives = 22/57 (38%), Gaps = 9/57 (15%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
A +++ D+ ++ G+ L+++ + + W + G +PS
Sbjct: 3 FVALYDFVASGDN-------TLSITKGEKLRVLGYNHNGEWCEAQTK--NGQGWVPS 50
>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 83
Score = 37.3 bits (86), Expect = 2e-04
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 19/69 (27%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDH-----NWWQARKD-------NV 115
V+AQ +Y D D + + GD++ +I + W K+ +
Sbjct: 15 VQAQHDYTATDTD-------ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKEL 67
Query: 116 AGSAGLIPS 124
G+ P
Sbjct: 68 EKCRGVFPE 76
>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 56
Score = 35.3 bits (81), Expect = 6e-04
Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
+ + Y DDD I GD + ++++D + W ++ G GL+P+
Sbjct: 2 NKVLYAYVQKDDD-------EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPT 51
>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 59
Score = 34.9 bits (80), Expect = 0.001
Identities = 9/58 (15%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
+ ++++++ + ++ D+L+I+ WW+ R + G +G +P+
Sbjct: 3 YAKSKYDFVARNSS-------ELSVMKDDVLEILDDRR-QWWKVRNAS--GDSGFVPN 50
>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 53
Score = 33.3 bits (76), Expect = 0.003
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 10/57 (17%)
Query: 68 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
A Y ++ D ++ G+ +++I K WW RKD G PS
Sbjct: 3 YVAIKAYTAVEGD-------EVSLLEGEAVEVIHKLLDGWWVIRKD---DVTGYFPS 49
>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 69
Score = 33.7 bits (77), Expect = 0.003
Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
Query: 68 VRAQFNYNPLDDDLIPCAQAG-IAFQIGDILQIISKDDHNWWQARKDNVAGSAGLIPS 124
+ Y + P A + GDI+++ + + W ++ G P
Sbjct: 7 MEVFQEYYGIPPP--PGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPC 62
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 33.8 bits (76), Expect = 0.017
Identities = 16/141 (11%), Positives = 31/141 (21%), Gaps = 14/141 (9%)
Query: 191 LVLLGAHGVGRRHIKNTLINKFPDKYAYPVP--------------QFITVCSVMFQIISK 236
+VL G G G+ + L + + + V + V M Q
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIA 62
Query: 237 DDHNWWQARKDNVAGSAGLIPSPELQEWRTACSTIDKTKHEQGIYSSFSLPFSVYRRDTT 296
A +Q C + + I + P ++ + +
Sbjct: 63 AGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQPPS 122
Query: 297 RSPRSDEENGRAYYFISHDEM 317
R
Sbjct: 123 LDVLEQRLRLRNTETEESLAK 143
Score = 25.7 bits (55), Expect = 6.9
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 278 QGIYSSFSLPFSVYRRDTTRSPRSDEENGRAYYFISHDEMMSDIAANQYLEYGK 331
+ ++ S F TTR+PR EE+G+ YYF++ + M DIAA ++E+ +
Sbjct: 18 KKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAGDFIEHAE 71
>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 32.0 bits (72), Expect = 0.030
Identities = 11/71 (15%), Positives = 19/71 (26%), Gaps = 15/71 (21%)
Query: 67 FVRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIISKDDHN---WWQARKDNVA-----GS 118
A +Y D + G ++ + SK +W
Sbjct: 23 MAVALQDYMAPDCR-------FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAAR 75
Query: 119 AGLIPSPELQE 129
G PS ++E
Sbjct: 76 LGYFPSSIVRE 86
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 32.6 bits (73), Expect = 0.042
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 189 KTLVLLGAHGVGRRHIKNTLINKFPDKYAYPVPQ 222
+ +V+ G G G+ + L ++PD + + V
Sbjct: 2 RPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSS 35
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 199
Score = 32.5 bits (73), Expect = 0.049
Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 180 VVKLPSFKRKTLVLLGAHGVGRRHIKNTLINKFPDKYAYPVP 221
V ++ + +++LG + + L+++FPDK+ VP
Sbjct: 1 VTQMEVHYARPIIILGP---TKDRANDDLLSEFPDKFGSCVP 39
Score = 28.7 bits (63), Expect = 0.74
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 282 SSFSLPFSVYRRDTTRSPRSDEENGRAYYFISHDEMM 318
S F F TTR R E +GR Y+F+S E M
Sbjct: 28 SEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSREKM 64
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 31.2 bits (69), Expect = 0.11
Identities = 23/158 (14%), Positives = 47/158 (29%), Gaps = 26/158 (16%)
Query: 183 LPSFKRKTLVLLGAHGVGRRHIKNTLI-----NKFPDKYAYPVPQFITVC-------SVM 230
LP++K LV++G GVG K+ L F Y + +++
Sbjct: 2 LPTYK---LVVVGDGGVG----KSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAIL 54
Query: 231 FQIISKDDHNWWQARKDNVAGSAGLIPSPELQEWRTACSTIDKTKHEQGIYSSFSLPFSV 290
+ + + R+ + G + + + + + + S P +
Sbjct: 55 DVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMIL 114
Query: 291 YRRDTTRSPRSDEENGRAYYFISHDEMMSDIAANQYLE 328
D + R EM + Y+E
Sbjct: 115 VANKV------DLMHLRKVTRDQGKEMATKYNI-PYIE 145
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 28.6 bits (62), Expect = 0.70
Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 7/63 (11%)
Query: 186 FKRKTLVLLGAHGVGRRHIKNTLINKFPDKYAYPVPQFITVCSVMFQIISKDDHNWWQAR 245
++ +VL+G GVG K+TL N F + + ++ D
Sbjct: 4 YR---VVLIGEQGVG----KSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATII 56
Query: 246 KDN 248
+
Sbjct: 57 LLD 59
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 27.9 bits (61), Expect = 1.1
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Query: 191 LVLLGAHGVGRRHIKNTLINKFPDKYAYPVPQFITVCSVMFQIISKDDHNW 241
+VL+G GVG K+ L+++F + + I D
Sbjct: 7 VVLIGDSGVG----KSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI 53
>d1vk6a3 d.113.1.4 (A:0-96) NADH pyrophosphatase {Escherichia coli
[TaxId: 562]}
Length = 97
Score = 26.7 bits (59), Expect = 1.4
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 230 MFQIISKDDHNWW-QARKDNVAGSAGLIPSPELQEW 264
M +II K DH WW + + + G +P E +
Sbjct: 2 MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANF 37
Score = 25.5 bits (56), Expect = 4.7
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 98 QIISKDDHNWW-QARKDNVAGSAGLIPSPELQEW 130
+II K DH WW + + + G +P E +
Sbjct: 4 RIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANF 37
>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha
subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 83
Score = 26.7 bits (58), Expect = 1.5
Identities = 14/90 (15%), Positives = 24/90 (26%), Gaps = 26/90 (28%)
Query: 35 VRAQFNYNPLDDDLIPCAQAGIAFQIGDILQIFVRAQFNYNPLDDDLIPCAQAGIAFQIG 94
RA ++Y ++ I +GDIL + + D
Sbjct: 6 YRALYDYKKEREE-------DIDLHLGDILTVNKGSLVALGFSD---------------- 42
Query: 95 DILQIISKDDHNWWQARKDNVAGSAGLIPS 124
Q ++ W + G G P
Sbjct: 43 --GQEARPEEIGWLNGYNET-TGERGDFPG 69
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 27.6 bits (60), Expect = 1.8
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 183 LPSFKRKTLVLLGAHGVGRRHIKNTLI-NKFPDKYAYPVPQFITVCSVMFQIISKDDHNW 241
+ +K LV++GA GVG+ + LI N F D+Y + V+ D
Sbjct: 1 MTEYK---LVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILD 57
Query: 242 W 242
Sbjct: 58 T 58
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 27.6 bits (60), Expect = 1.8
Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 9/69 (13%)
Query: 183 LPSFKRKTLVLLGAHGVGRRHIKNTLINKFPDKYAYPVPQFITVCSVMFQIISKDDHNWW 242
L K ++++G+ GVG K+ L +F V + + ++ D
Sbjct: 2 LALHK---VIMVGSGGVG----KSALTLQFMYD--EFVEDYEPTKADSYRKKVVLDGEEV 52
Query: 243 QARKDNVAG 251
Q + AG
Sbjct: 53 QIDILDTAG 61
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 27.3 bits (59), Expect = 2.5
Identities = 8/69 (11%), Positives = 21/69 (30%), Gaps = 9/69 (13%)
Query: 182 KLPSFKRKTLVLLGAHGVGRRHIKNTLINKF-----PDKYAYPVPQFITVCSVMFQIISK 236
+L + + ++++G G K T++ +F + + +
Sbjct: 9 RLFNHQEHKVIIVGLDNAG----KTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMW 64
Query: 237 DDHNWWQAR 245
D R
Sbjct: 65 DIGGQESLR 73
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 26.9 bits (58), Expect = 2.7
Identities = 8/62 (12%), Positives = 17/62 (27%), Gaps = 4/62 (6%)
Query: 183 LPSFKRKTLVLLGAHGVGRRHIKNTLI-NKFPDKYAYPVPQFITVCSVMFQIISKDDHNW 241
+P + L +LG G+ + + + + Q+ V Q
Sbjct: 3 IPELR---LGVLGDARSGKSSLIHRFLTGSYQVLEKTESEQYKKEMLVDGQTHLVLIREE 59
Query: 242 WQ 243
Sbjct: 60 AG 61
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.9 bits (58), Expect = 2.8
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 191 LVLLGAHGVGRRHIKNTLI-NKFPDKYAYPVPQFITVCSVMFQIISKDDHNWWQ 243
LV++G GVG+ + I + F Y + T V+ ++ D
Sbjct: 8 LVVVGGGGVGKSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTA 61
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 26.9 bits (58), Expect = 3.0
Identities = 18/68 (26%), Positives = 26/68 (38%), Gaps = 7/68 (10%)
Query: 184 PSFKRKTLVLLGAHGVGRRHIKNTLINKFPDKYAYPVPQFITVCSVMFQIISKDDHNWWQ 243
PS K LV++G GVG K+ L +F Y V + + I D +
Sbjct: 3 PSETHK-LVVVGGGGVG----KSALTIQFIQS--YFVSDYDPTIEDSYTKICSVDGIPAR 55
Query: 244 ARKDNVAG 251
+ AG
Sbjct: 56 LDILDTAG 63
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 26.8 bits (58), Expect = 3.1
Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 4/71 (5%)
Query: 174 LVTYEEVVKLPSFKRKTLVLLGAHGVGRRHIKNTLINKFPDKYAYPVPQFITVCSVMFQI 233
L++ +K + ++LLG G K TL+ + + + Q
Sbjct: 2 LLSILRKLKSAPDQEVRILLLGLDNAG----KTTLLKQLASEDISHITPTQGFNIKSVQS 57
Query: 234 ISKDDHNWWQA 244
+ W
Sbjct: 58 QGFKLNVWDIG 68
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.9 bits (58), Expect = 3.2
Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 4/61 (6%)
Query: 182 KLPSFKRKTLVLLGAHGVGRRHIKNTLI-NKFPDKYAYPVPQFITVCSVMFQIISKDDHN 240
K+ FK LVLLG VG+ + + +F + + +V +
Sbjct: 3 KICQFK---LVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 59
Query: 241 W 241
W
Sbjct: 60 W 60
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 26.5 bits (57), Expect = 3.7
Identities = 6/63 (9%), Positives = 14/63 (22%), Gaps = 9/63 (14%)
Query: 189 KTLVLLGAHGVGRRHIKNTLIN-----KFPDKYAYPVPQFITVCSVMFQIISKDDHNWWQ 243
+ ++ +G G K L ++ D + S +
Sbjct: 1 RAVLFVGLCDSG----KTLLFVRLLTGQYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPG 56
Query: 244 ARK 246
Sbjct: 57 HES 59
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 26.5 bits (57), Expect = 3.8
Identities = 8/57 (14%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 188 RKTLVLLGAHGVGRRHIKNTLI-NKFPDKYAYPVPQFITVCSVMFQIISKDDHNWWQ 243
+ +V++G G+ + + + FP+ Y V + T + +
Sbjct: 2 KCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 58
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 26.5 bits (57), Expect = 3.8
Identities = 9/60 (15%), Positives = 19/60 (31%), Gaps = 4/60 (6%)
Query: 182 KLPSFKRKTLVLLGAHGVGRRHIKNTLINKFPDKYAYPVPQFITVCSVMFQIISKDDHNW 241
K+ K +++LG G K T++ K + + + + W
Sbjct: 6 KIFGNKEMRILMLGLDAAG----KTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVW 61
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 26.2 bits (56), Expect = 4.1
Identities = 9/58 (15%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 187 KRKTLVLLGAHGVGRRHIKNTLI-NKFPDKYAYPVPQFITVCSVMFQIISKDDHNWWQ 243
K + + +LG VG+ + + +F D Y + T +
Sbjct: 3 KSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTA 60
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.5 bits (57), Expect = 4.2
Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 183 LPSFKRKTLVLLGAHGVGRRHIKNTLI-NKFPDKYAYPVPQFITVCSVMFQIISKDDHNW 241
+ +K LV+LG+ GVG+ + + F +KY + + +
Sbjct: 1 MREYK---LVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILD 57
Query: 242 WQ 243
Sbjct: 58 TA 59
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 26.3 bits (57), Expect = 4.4
Identities = 5/32 (15%), Positives = 10/32 (31%), Gaps = 1/32 (3%)
Query: 191 LVLLGAHGVGRRHIKNTLINKFP-DKYAYPVP 221
++ G G+ + L+ P V
Sbjct: 5 YIVSAPSGAGKSSLIQALLKTQPLYDTQVSVS 36
Score = 26.3 bits (57), Expect = 4.4
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 288 FSVYRRDTTRSPRSDEENGRAYYFISHDEMMSDIAANQYLEYGK 331
V TTR PR E +G Y+F++HDE I+ + +LE+ +
Sbjct: 31 TQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAE 74
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 26.4 bits (57), Expect = 4.4
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 7/63 (11%)
Query: 185 SFKRKTLVLLGAHGVGRRHIKNTLINKFPDKYAYPVPQFITVCSVMFQIISKDDHNWWQA 244
SFK +VLLG VG K +L+ ++ + S + + ++ A
Sbjct: 3 SFK---VVLLGEGCVG----KTSLVLRYCENKFNDKHITTLGASFLTKKLNIGGKRVNLA 55
Query: 245 RKD 247
D
Sbjct: 56 IWD 58
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 26.2 bits (56), Expect = 5.2
Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 4/60 (6%)
Query: 183 LPSFKRKTLVLLGAHGVGRRHIKNTLI-NKFPDKYAYPVPQFITVCSVMFQIISKDDHNW 241
+ S K LVLLG VG+ I + N F + + V + W
Sbjct: 1 VTSIK---LVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIW 57
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 26.1 bits (56), Expect = 5.5
Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 9/58 (15%)
Query: 188 RKTLVLLGAHGVGRRHIKNTLI-----NKFPDKYAYPVPQFITVCSVMFQIISKDDHN 240
RK LV++G G K L+ ++FP+ Y V + + +
Sbjct: 2 RKKLVIVGDGACG----KTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALW 55
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 25.8 bits (55), Expect = 6.1
Identities = 9/52 (17%), Positives = 16/52 (30%), Gaps = 4/52 (7%)
Query: 191 LVLLGAHGVGRRHIKNTLINKFPDKYAYPVPQFITVCSVMFQIISKDDHNWW 242
L+ LG G K TL++ + + S I + +
Sbjct: 3 LLFLGLDNAG----KTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFD 50
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 25.7 bits (55), Expect = 7.9
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 191 LVLLGAHGVGRRHIKNTLI-NKFPDKYAYPVPQFITVCSVMFQIISKDDHNWWQ 243
+V+LG+ GVG+ + + F +KY + F + S +
Sbjct: 6 VVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTA 59
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 25.4 bits (54), Expect = 8.5
Identities = 12/61 (19%), Positives = 16/61 (26%), Gaps = 4/61 (6%)
Query: 187 KRKTLVLLGAHGVGRRHIKNTLINKFPDKYAYPVPQFITVCSVMFQIISKDDHNWWQARK 246
K LV LG G K TL++ D + S I +
Sbjct: 12 KTGKLVFLGLDNAG----KTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGH 67
Query: 247 D 247
Sbjct: 68 I 68
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 25.5 bits (54), Expect = 8.7
Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 7/57 (12%)
Query: 186 FKRKTLVLLGAHGVGRRHIKNTLINKFPDKYAYPVPQFITVCSVMFQIISKDDHNWW 242
+K ++LLGA GVG K+ L F P + ++ ++ +
Sbjct: 2 YK---VLLLGAPGVG----KSALARIFGGVEDGPEAEAAGHTYDRSIVVDGEEASLM 51
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 25.3 bits (54), Expect = 9.7
Identities = 11/66 (16%), Positives = 20/66 (30%), Gaps = 9/66 (13%)
Query: 185 SFKRKTLVLLGAHGVGRRHIKNTLINK-----FPDKYAYPVPQFITVCSVMFQIISKDDH 239
S K +++LG G G K T++ + T+ ++ D
Sbjct: 14 SNKELRILILGLDGAG----KTTILYRLQIGEVVTTKPTIGFNVETLSYKNLKLNVWDLG 69
Query: 240 NWWQAR 245
R
Sbjct: 70 GQTSIR 75
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.137 0.421
Gapped
Lambda K H
0.267 0.0400 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,368,845
Number of extensions: 64745
Number of successful extensions: 310
Number of sequences better than 10.0: 1
Number of HSP's gapped: 277
Number of HSP's successfully gapped: 134
Length of query: 352
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 266
Effective length of database: 1,226,816
Effective search space: 326333056
Effective search space used: 326333056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.1 bits)