Your job contains 1 sequence.
>psy12795
MGNDAPLACLSEFQPLLYDYFKQLFAQLLPVLLSVTTMYCSLSLQVTNPPIDPFREKVVM
SLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHRGWKVMKVSLMADLTNE
S
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12795
(121 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0036663 - symbol:CG9674 species:7227 "Drosophila m... 261 5.4e-31 2
POMBASE|SPAPB1E7.07 - symbol:glt1 "glutamate synthase Glt... 177 7.4e-20 2
CGD|CAL0000516 - symbol:GLT1 species:5476 "Candida albica... 167 3.5e-18 2
WB|WBGene00012326 - symbol:W07E11.1 species:6239 "Caenorh... 230 1.7e-17 1
UNIPROTKB|Q0JKD0 - symbol:LOC_Os01g48960 "Glutamate synth... 199 3.4e-14 1
TAIR|locus:2178461 - symbol:GLT1 "NADH-dependent glutamat... 197 5.7e-14 1
ASPGD|ASPL0000027159 - symbol:gltA species:162425 "Emeric... 195 8.9e-14 1
TIGR_CMR|CPS_0761 - symbol:CPS_0761 "putative glutamate s... 137 7.3e-13 2
UNIPROTKB|P55037 - symbol:gltB "Ferredoxin-dependent glut... 124 7.7e-13 2
UNIPROTKB|P09831 - symbol:gltB "glutamate synthase, large... 125 3.7e-12 2
TAIR|locus:2146718 - symbol:GLU1 "glutamate synthase 1" s... 115 7.6e-12 2
TIGR_CMR|CJE_0007 - symbol:CJE_0007 "glutamate synthase, ... 114 7.9e-12 2
UNIPROTKB|Q9KPJ1 - symbol:VC_2376 "Glutamate synthase, la... 121 1.6e-11 2
TIGR_CMR|VC_2376 - symbol:VC_2376 "glutamate synthase, la... 121 1.6e-11 2
TAIR|locus:2040317 - symbol:GLU2 "glutamate synthase 2" s... 111 1.9e-11 2
UNIPROTKB|Q4KJI6 - symbol:gltB "Glutamate synthase, large... 123 2.0e-11 2
TIGR_CMR|SO_1325 - symbol:SO_1325 "glutamate synthase, la... 115 2.5e-11 2
TIGR_CMR|CPS_4501 - symbol:CPS_4501 "glutamate synthase, ... 113 5.2e-11 2
SGD|S000002330 - symbol:GLT1 "NAD(+)-dependent glutamate ... 165 1.4e-10 1
UNIPROTKB|Q9KPJ4 - symbol:VC_2373 "Glutamate synthase, la... 139 5.5e-08 1
TIGR_CMR|VC_2373 - symbol:VC_2373 "glutamate synthase, la... 139 5.5e-08 1
UNIPROTKB|P96218 - symbol:gltB "Glutamate synthase [NADPH... 131 3.9e-07 1
UNIPROTKB|Q0C616 - symbol:gltB "Glutamate synthase, large... 94 3.2e-05 2
>FB|FBgn0036663 [details] [associations]
symbol:CG9674 species:7227 "Drosophila melanogaster"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005506
"iron ion binding" evidence=IEA] [GO:0016040 "glutamate synthase
(NADH) activity" evidence=IEA] [GO:0010181 "FMN binding"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0006537 "glutamate biosynthetic process"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 InterPro:IPR016040 EMBL:AE014296
Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660
GO:GO:0051536 GO:GO:0006537 Gene3D:1.10.1060.10 GO:GO:0004355
GO:GO:0010181 InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
GeneTree:ENSGT00500000044896 Gene3D:2.160.20.60 SUPFAM:SSF69336
KO:K00264 GO:GO:0016040 TIGRFAMs:TIGR01317 HSSP:P55038
UniGene:Dm.11253 GeneID:39878 KEGG:dme:Dmel_CG9674
FlyBase:FBgn0036663 ChiTaRS:CG9674 GenomeRNAi:39878 NextBio:815851
EMBL:AY094734 RefSeq:NP_648922.1 RefSeq:NP_788517.1 IntAct:Q9VVA4
MINT:MINT-312597 STRING:Q9VVA4 EnsemblMetazoa:FBtr0075341
EnsemblMetazoa:FBtr0075344 UCSC:CG9674-RA InParanoid:Q9VVA4
Uniprot:Q9VVA4
Length = 2114
Score = 261 (96.9 bits), Expect = 5.4e-31, Sum P(2) = 5.4e-31
Identities = 46/73 (63%), Positives = 62/73 (84%)
Query: 42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLN 101
L QVTNPPIDPFREKVVMS+ CP+GPEAN+L+PSA+Q HR++L NP+LS+ D ++++ N
Sbjct: 594 LFAQVTNPPIDPFREKVVMSMQCPLGPEANLLQPSAQQVHRIWLTNPILSIPDTQLLKRN 653
Query: 102 THRGW--KVMKVS 112
THRGW KV+ ++
Sbjct: 654 THRGWRTKVLDIT 666
Score = 128 (50.1 bits), Expect = 5.4e-31, Sum P(2) = 5.4e-31
Identities = 23/28 (82%), Positives = 26/28 (92%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MGNDAPLACLS FQP+ Y+YFKQLFAQ+
Sbjct: 571 MGNDAPLACLSNFQPIPYEYFKQLFAQV 598
Score = 32 (16.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 67 GPEANILEPSA 77
G EA+I EPS+
Sbjct: 883 GGEAHINEPSS 893
>POMBASE|SPAPB1E7.07 [details] [associations]
symbol:glt1 "glutamate synthase Glt1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=IEA] [GO:0005506 "iron ion
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006537 "glutamate
biosynthetic process" evidence=ISO] [GO:0006541 "glutamine
metabolic process" evidence=IEA] [GO:0010181 "FMN binding"
evidence=IEA] [GO:0016040 "glutamate synthase (NADH) activity"
evidence=ISO] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 UniPathway:UPA00045
UniPathway:UPA00634 PomBase:SPAPB1E7.07 GO:GO:0005829 GO:GO:0005739
EMBL:CU329670 Gene3D:3.20.20.70 GO:GO:0005506 GO:GO:0050660
GO:GO:0051538 GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10
GO:GO:0004355 GO:GO:0010181 GO:GO:0006541 InterPro:IPR017932
PROSITE:PS51278 SUPFAM:SSF46548 Gene3D:2.160.20.60 SUPFAM:SSF69336
KO:K00264 GO:GO:0016040 TIGRFAMs:TIGR01317 EMBL:D89165 PIR:T42527
RefSeq:NP_594133.1 ProteinModelPortal:Q9C102 STRING:Q9C102
PRIDE:Q9C102 EnsemblFungi:SPAPB1E7.07.1 GeneID:2543509
KEGG:spo:SPAPB1E7.07 HOGENOM:HOG000031559 OMA:PPAWQSN
OrthoDB:EOG444PTC NextBio:20804519 Uniprot:Q9C102
Length = 2111
Score = 177 (67.4 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 35/75 (46%), Positives = 47/75 (62%)
Query: 42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLN 101
L QVTNPPIDP RE +VMSL C IGP N+LE + QC RL +P P+L++ + ++ N
Sbjct: 581 LFAQVTNPPIDPIREAIVMSLQCYIGPSGNLLEINQSQCRRLRMPTPILTVEEFNALK-N 639
Query: 102 THR---GWKVMKVSL 113
R WKV + +
Sbjct: 640 VDRIYPDWKVASIDI 654
Score = 106 (42.4 bits), Expect = 7.4e-20, Sum P(2) = 7.4e-20
Identities = 20/28 (71%), Positives = 24/28 (85%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MGNDA +ACLS+ LLYDYF+QLFAQ+
Sbjct: 558 MGNDAAIACLSDQPRLLYDYFRQLFAQV 585
Score = 33 (16.7 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 21 FKQLFAQLLPVL 32
F + FA LLP++
Sbjct: 328 FGEEFASLLPII 339
>CGD|CAL0000516 [details] [associations]
symbol:GLT1 species:5476 "Candida albicans" [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006807 "nitrogen compound metabolic process" evidence=IEA]
InterPro:IPR000583 InterPro:IPR001327 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006005 InterPro:IPR006982
InterPro:IPR009051 InterPro:IPR012220 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR023753 Pfam:PF00070 Pfam:PF00310
Pfam:PF01493 Pfam:PF01645 Pfam:PF04898 Pfam:PF07992
PIRSF:PIRSF000187 InterPro:IPR016040 Gene3D:3.20.20.70
Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660 GO:GO:0051536
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 EMBL:AACQ01000038
SUPFAM:SSF46548 Gene3D:2.160.20.60 SUPFAM:SSF69336 KO:K00264
GO:GO:0016040 TIGRFAMs:TIGR01317 RefSeq:XP_718760.1
ProteinModelPortal:Q5AAQ5 STRING:Q5AAQ5 GeneID:3639651
KEGG:cal:CaO19.13636 CGD:CAL0069988 Uniprot:Q5AAQ5
Length = 2126
Score = 167 (63.8 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIR-L 100
L QVTNPPIDP REK+VMSL C +GP+ N+LE Q +RL L +P+L+ +L I+ +
Sbjct: 568 LFAQVTNPPIDPIREKIVMSLECYVGPQGNLLEMKPDQLNRLLLKSPILTSSELLAIKNI 627
Query: 101 NT-HRGWKVMKVSL 113
T + W V + +
Sbjct: 628 QTVYPSWSVANIDI 641
Score = 100 (40.3 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MGND LAC+SE LLY+YF+QLFAQ+
Sbjct: 545 MGNDNALACISEQPKLLYEYFRQLFAQV 572
Score = 39 (18.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 54 FREKVVMSLMCPIGPEANILE 74
F +VV+ M +GPEA+ LE
Sbjct: 2023 FPAEVVLLSMGFLGPEADNLE 2043
>WB|WBGene00012326 [details] [associations]
symbol:W07E11.1 species:6239 "Caenorhabditis elegans"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA] [GO:0015930 "glutamate synthase
activity" evidence=IEA] [GO:0016638 "oxidoreductase activity,
acting on the CH-NH2 group of donors" evidence=IEA] [GO:0016639
"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006807 "nitrogen compound
metabolic process" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898 Pfam:PF07992
PIRSF:PIRSF000187 InterPro:IPR016040 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:3.20.20.70 Gene3D:3.40.50.720
GO:GO:0005506 GO:GO:0050660 GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 GO:GO:0010181 InterPro:IPR017932
PROSITE:PS51278 SUPFAM:SSF46548 GeneTree:ENSGT00500000044896
Gene3D:2.160.20.60 SUPFAM:SSF69336 EMBL:Z49868 GO:GO:0016040
TIGRFAMs:TIGR01317 OMA:PPAWQSN EMBL:Z49889 RefSeq:NP_509693.2
ProteinModelPortal:G5EF05 SMR:G5EF05 EnsemblMetazoa:W07E11.1
GeneID:181223 KEGG:cel:CELE_W07E11.1 CTD:181223 WormBase:W07E11.1
Uniprot:G5EF05
Length = 2175
Score = 230 (86.0 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 43/84 (51%), Positives = 59/84 (70%)
Query: 30 PVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPL 89
P+L S + L QVTNPPIDPFRE++VMSL CPIGPE+N+LEP + RL L P+
Sbjct: 539 PLLFSY---FQQLFAQVTNPPIDPFREQIVMSLRCPIGPESNMLEPDTELASRLILEQPV 595
Query: 90 LSLYDLEVIRLNTHRGWKVMKVSL 113
LS+ D+EVI+ ++GWK ++ +
Sbjct: 596 LSMVDMEVIKRTMYKGWKAKEIDI 619
Score = 113 (44.8 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 20/28 (71%), Positives = 25/28 (89%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MGNDA LACLS++ PLL+ YF+QLFAQ+
Sbjct: 525 MGNDAALACLSDYSPLLFSYFQQLFAQV 552
Score = 40 (19.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 34 SVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAK 78
++ T+ C L + + P + V+ L P +NIL P K
Sbjct: 2071 TIRTIECDLCILAMGF-VGP-EKSVIEQLNLKTDPRSNILTPKDK 2113
>UNIPROTKB|Q0JKD0 [details] [associations]
symbol:LOC_Os01g48960 "Glutamate synthase 1 [NADH],
chloroplastic" species:39947 "Oryza sativa Japonica Group"
[GO:0006537 "glutamate biosynthetic process" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] [GO:0019676 "ammonia
assimilation cycle" evidence=IMP] [GO:0048589 "developmental
growth" evidence=IMP] [GO:0060359 "response to ammonium ion"
evidence=IEP] InterPro:IPR000583 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006005 InterPro:IPR006982
InterPro:IPR009051 InterPro:IPR012220 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR023753 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187
UniPathway:UPA00045 UniPathway:UPA00634 GO:GO:0009507 GO:GO:0009536
Gene3D:3.20.20.70 GO:GO:0005506 GO:GO:0050660 GO:GO:0051538
GO:GO:0006537 GO:GO:0048589 eggNOG:COG0493 Gene3D:1.10.1060.10
EMBL:AP008207 GO:GO:0019676 GO:GO:0010181 InterPro:IPR017932
PROSITE:PS51278 GO:GO:0060359 SUPFAM:SSF46548 Gene3D:2.160.20.60
SUPFAM:SSF69336 EMBL:AB008845 RefSeq:NP_001043884.1
UniGene:Os.12738 ProteinModelPortal:Q0JKD0 STRING:Q0JKD0
PRIDE:Q0JKD0 GeneID:4324398 KEGG:osa:4324398 Gramene:Q0JKD0
KO:K00264 OMA:IEKHIAY ProtClustDB:CLSN2683760 GO:GO:0016040
GO:GO:0097054 TIGRFAMs:TIGR01317 Uniprot:Q0JKD0
Length = 2167
Score = 199 (75.1 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHR 104
QVTNPPIDP REK+V S+ C IGPE ++LE + KQC+RL L PL+S+ ++E I+ +R
Sbjct: 629 QVTNPPIDPIREKIVTSMECMIGPEGDLLETTEKQCNRLALEGPLVSIDEMEAIKKMNYR 688
Query: 105 GW--KVMKVS 112
GW KV+ ++
Sbjct: 689 GWRSKVLDIT 698
>TAIR|locus:2178461 [details] [associations]
symbol:GLT1 "NADH-dependent glutamate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA;IDA;IMP] [GO:0006807 "nitrogen
compound metabolic process" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA]
[GO:0015930 "glutamate synthase activity" evidence=IEA] [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA;IDA;IMP]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016638
"oxidoreductase activity, acting on the CH-NH2 group of donors"
evidence=IEA] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0042128 "nitrate assimilation" evidence=TAS] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0019676 "ammonia
assimilation cycle" evidence=IMP] [GO:0048589 "developmental
growth" evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009536 "plastid" evidence=TAS]
InterPro:IPR000583 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006005 InterPro:IPR006982 InterPro:IPR009051
InterPro:IPR012220 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR023753 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187 UniPathway:UPA00045
UniPathway:UPA00634 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046686 GO:GO:0009570
Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660
EMBL:AB020754 GO:GO:0051538 GO:GO:0006537 GO:GO:0048589
eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019676 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
Gene3D:2.160.20.60 SUPFAM:SSF69336 KO:K00264
ProtClustDB:CLSN2683760 GO:GO:0016040 GO:GO:0097054
TIGRFAMs:TIGR01317 HOGENOM:HOG000031559 OMA:WMAARQA HSSP:P55038
EMBL:AY099795 EMBL:AK222185 EMBL:AK230382 IPI:IPI00521970
RefSeq:NP_001190529.1 RefSeq:NP_001190530.1 RefSeq:NP_200158.2
UniGene:At.67093 UniGene:At.8951 ProteinModelPortal:Q9LV03
SMR:Q9LV03 STRING:Q9LV03 PaxDb:Q9LV03 PRIDE:Q9LV03
EnsemblPlants:AT5G53460.1 EnsemblPlants:AT5G53460.2
EnsemblPlants:AT5G53460.3 GeneID:835427 KEGG:ath:AT5G53460
TAIR:At5g53460 InParanoid:Q9LV03 PhylomeDB:Q9LV03 BRENDA:1.4.1.14
Genevestigator:Q9LV03 Uniprot:Q9LV03
Length = 2208
Score = 197 (74.4 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 36/70 (51%), Positives = 50/70 (71%)
Query: 45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHR 104
QVTNPPIDP REK+V S+ C IGPE ++ E + +QCHRL L PLL + ++E I+ +R
Sbjct: 648 QVTNPPIDPIREKIVTSMECMIGPEGDLTETTEEQCHRLSLKGPLLKIEEMEAIKKMNYR 707
Query: 105 GW--KVMKVS 112
GW KV+ ++
Sbjct: 708 GWRTKVLDIT 717
>ASPGD|ASPL0000027159 [details] [associations]
symbol:gltA species:162425 "Emericella nidulans"
[GO:0016040 "glutamate synthase (NADH) activity"
evidence=ISA;RCA;IMP] [GO:0009064 "glutamine family amino acid
metabolic process" evidence=IGI;RCA;IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 GO:GO:0005739 Gene3D:3.20.20.70
GO:GO:0005506 GO:GO:0050660 GO:GO:0051536 EMBL:BN001305
GO:GO:0006537 Gene3D:1.10.1060.10 GO:GO:0019676 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
Gene3D:2.160.20.60 SUPFAM:SSF69336 GO:GO:0016040 TIGRFAMs:TIGR01317
OMA:WMAARQA ProteinModelPortal:C8VEZ6 EnsemblFungi:CADANIAT00003118
Uniprot:C8VEZ6
Length = 2126
Score = 195 (73.7 bits), Expect = 8.9e-14, P = 8.9e-14
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIR-L 100
L QVTNPPIDP RE VVMSL C +GP+ N+LE QC RL LP+P+LS+ + ++ +
Sbjct: 573 LFAQVTNPPIDPIREAVVMSLECYVGPQGNLLEMDPSQCRRLLLPSPILSIPEFNALKNI 632
Query: 101 NT-HRGWKVMKVSL 113
NT H+ W V + +
Sbjct: 633 NTVHKDWTVRLIDI 646
Score = 109 (43.4 bits), Expect = 0.00012, P = 0.00012
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQLL-----PVLLSVT-TMYCSLSLQVTNPPIDPF 54
MGNDAPLAC+++ LLY+YF+QLFAQ+ P+ +V ++ C + Q +DP
Sbjct: 550 MGNDAPLACIAKQPRLLYEYFRQLFAQVTNPPIDPIREAVVMSLECYVGPQGNLLEMDPS 609
Query: 55 REKVVMSLMCPIG--PEANILE 74
+ + ++ L PI PE N L+
Sbjct: 610 QCRRLL-LPSPILSIPEFNALK 630
>TIGR_CMR|CPS_0761 [details] [associations]
symbol:CPS_0761 "putative glutamate synthase,
ferredoxin-dependent" species:167879 "Colwellia psychrerythraea
34H" [GO:0006537 "glutamate biosynthetic process" evidence=ISS]
[GO:0016041 "glutamate synthase (ferredoxin) activity"
evidence=ISS] [GO:0019676 "ammonia assimilation cycle"
evidence=ISS] InterPro:IPR000583 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006982 InterPro:IPR013785
Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Gene3D:3.20.20.70 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0006537 InterPro:IPR017932 PROSITE:PS51278 Gene3D:2.160.20.60
SUPFAM:SSF69336 OMA:WMAARQA eggNOG:COG0069 HOGENOM:HOG000031558
KO:K00265 GO:GO:0015930 RefSeq:YP_267510.1
ProteinModelPortal:Q488K4 STRING:Q488K4 GeneID:3522248
KEGG:cps:CPS_0761 PATRIC:21464833 ProtClustDB:CLSK874778
BioCyc:CPSY167879:GI48-847-MONOMER Uniprot:Q488K4
Length = 1535
Score = 137 (53.3 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRL- 100
L QVTNPPIDP RE++VMSL IG N+L+ + + CH++ + P+L++ L ++
Sbjct: 524 LFAQVTNPPIDPIREELVMSLRGYIGKSFNLLDETPEHCHKVEIEQPVLTIDQLRKLQYI 583
Query: 101 -NTHRGWKVMKVSLMA 115
N H K + ++ A
Sbjct: 584 DNNHLQSKTIAITFKA 599
Score = 76 (31.8 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 17/28 (60%), Positives = 18/28 (64%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MG D PLA LS L YFKQLFAQ+
Sbjct: 501 MGTDTPLAVLSSRPQQLSHYFKQLFAQV 528
>UNIPROTKB|P55037 [details] [associations]
symbol:gltB "Ferredoxin-dependent glutamate synthase 1"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006982
InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 UniPathway:UPA00045 UniPathway:UPA00634
Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051538 EMBL:BA000022
GenomeReviews:BA000022_GR GO:GO:0006541 InterPro:IPR017932
PROSITE:PS51278 Gene3D:2.160.20.60 SUPFAM:SSF69336 GO:GO:0097054
HOGENOM:HOG000031559 OMA:WMAARQA eggNOG:COG0069 KO:K00284
GO:GO:0016041 EMBL:X80485 PIR:S60228 RefSeq:NP_440338.1
RefSeq:YP_005650395.1 ProteinModelPortal:P55037 IntAct:P55037
STRING:P55037 GeneID:12256085 GeneID:953637 KEGG:syn:sll1502
KEGG:syy:SYNGTS_0442 PATRIC:23837822 ProtClustDB:CLSK892635
Uniprot:P55037
Length = 1550
Score = 124 (48.7 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLN 101
L QVTNPPID RE+++ S IG E N+L+P + C + L P+L+ DL ++
Sbjct: 543 LFAQVTNPPIDSIREEIITSAETTIGGEGNLLDPRPESCRLIELKTPILTNEDLAKLKAL 602
Query: 102 THRGWKVMKVSLMAD 116
+K + + ++ D
Sbjct: 603 DDDEFKSVTLDILFD 617
Score = 89 (36.4 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MG D PLA LS+ LLY+YF+QLFAQ+
Sbjct: 520 MGADTPLAVLSDKPKLLYNYFQQLFAQV 547
>UNIPROTKB|P09831 [details] [associations]
symbol:gltB "glutamate synthase, large subunit"
species:83333 "Escherichia coli K-12" [GO:0097054 "L-glutamate
biosynthetic process" evidence=IEA] [GO:0006807 "nitrogen compound
metabolic process" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0051538 "3 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006541 "glutamine metabolic process" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0004355 "glutamate synthase
(NADPH) activity" evidence=IEA;IDA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA;IDA] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006982
InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 UniPathway:UPA00045 UniPathway:UPA00634
Gene3D:3.20.20.70 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 GO:GO:0051538 GO:GO:0006537 GO:GO:0004355 GO:GO:0006541
InterPro:IPR017932 PROSITE:PS51278 Gene3D:2.160.20.60
SUPFAM:SSF69336 GO:GO:0097054 eggNOG:COG0069 HOGENOM:HOG000031558
EMBL:M18747 EMBL:M68876 PIR:F65112 RefSeq:NP_417679.2
RefSeq:YP_491397.1 ProteinModelPortal:P09831 DIP:DIP-9802N
IntAct:P09831 MINT:MINT-1248755 MEROPS:C44.003 PaxDb:P09831
PRIDE:P09831 EnsemblBacteria:EBESCT00000001750
EnsemblBacteria:EBESCT00000014984 GeneID:12934216 GeneID:947724
KEGG:ecj:Y75_p3132 KEGG:eco:b3212 PATRIC:32121846 EchoBASE:EB0398
EcoGene:EG10403 KO:K00265 ProtClustDB:PRK11750
BioCyc:EcoCyc:GLUSYNLARGE-MONOMER BioCyc:ECOL316407:JW3179-MONOMER
BioCyc:MetaCyc:GLUSYNLARGE-MONOMER BRENDA:1.4.1.13
Genevestigator:P09831 Uniprot:P09831
Length = 1486
Score = 125 (49.1 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 28/74 (37%), Positives = 39/74 (52%)
Query: 45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHR 104
QVTNPPIDP RE VMSL IG E N+ + Q HRL +P+L D + +
Sbjct: 512 QVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLTTMKEE 571
Query: 105 GWKVMKVSLMADLT 118
++ + + D+T
Sbjct: 572 HYRADTLDITFDVT 585
Score = 81 (33.6 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MG+D P A LS ++YDYF+Q FAQ+
Sbjct: 486 MGDDTPFAVLSSQPRIIYDYFRQQFAQV 513
>TAIR|locus:2146718 [details] [associations]
symbol:GLU1 "glutamate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006537 "glutamate biosynthetic process"
evidence=IEA] [GO:0006807 "nitrogen compound metabolic process"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0015930 "glutamate
synthase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016638 "oxidoreductase activity,
acting on the CH-NH2 group of donors" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=IEP] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009853
"photorespiration" evidence=IMP;TAS] [GO:0016041 "glutamate
synthase (ferredoxin) activity" evidence=ISS;IDA] [GO:0080114
"positive regulation of glycine hydroxymethyltransferase activity"
evidence=IDA] [GO:0006833 "water transport" evidence=RCA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009637 "response
to blue light" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0009658 "chloroplast organization" evidence=RCA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
[GO:0009814 "defense response, incompatible interaction"
evidence=RCA] [GO:0009902 "chloroplast relocation" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0010114 "response to red light" evidence=RCA] [GO:0010155
"regulation of proton transport" evidence=RCA] [GO:0010218
"response to far red light" evidence=RCA] [GO:0016117 "carotenoid
biosynthetic process" evidence=RCA] [GO:0019684 "photosynthesis,
light reaction" evidence=RCA] [GO:0042742 "defense response to
bacterium" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR000583 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006982 InterPro:IPR013785
Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
UniPathway:UPA00045 UniPathway:UPA00634 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0016020
Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0048046 GO:GO:0009941
GO:GO:0009416 GO:GO:0051538 GO:GO:0009853 GO:GO:0006541
InterPro:IPR017932 PROSITE:PS51278 EMBL:AL391716 Gene3D:2.160.20.60
SUPFAM:SSF69336 GO:GO:0097054 EMBL:Y09667 EMBL:U39287
IPI:IPI00539225 IPI:IPI00540577 RefSeq:NP_568134.1
RefSeq:NP_850763.1 UniGene:At.21961 UniGene:At.67926
ProteinModelPortal:Q9ZNZ7 IntAct:Q9ZNZ7 STRING:Q9ZNZ7 PaxDb:Q9ZNZ7
PRIDE:Q9ZNZ7 ProMEX:Q9ZNZ7 EnsemblPlants:AT5G04140.2 GeneID:830292
KEGG:ath:AT5G04140 TAIR:At5g04140 eggNOG:COG0069
HOGENOM:HOG000031558 InParanoid:Q9ZNZ7 KO:K00284 OMA:RMSASIV
PhylomeDB:Q9ZNZ7 ProtClustDB:CLSN2913236 ArrayExpress:Q9ZNZ7
Genevestigator:Q9ZNZ7 GermOnline:AT5G04140 GO:GO:0016041
GO:GO:0080114 Uniprot:Q9ZNZ7
Length = 1648
Score = 115 (45.5 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIRLNTHR 104
QVTNP IDP RE +VMSL IG NILE + ++ L NP+L+ LE + + +
Sbjct: 636 QVTNPAIDPLREGLVMSLEVNIGKRGNILELGPENASQVILSNPVLNEGALEELMKDQYL 695
Query: 105 GWKVM 109
KV+
Sbjct: 696 KPKVL 700
Score = 89 (36.4 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MG+D PLA LS+ +LYDYFKQ FAQ+
Sbjct: 610 MGDDIPLAGLSQRPHMLYDYFKQRFAQV 637
>TIGR_CMR|CJE_0007 [details] [associations]
symbol:CJE_0007 "glutamate synthase, large subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006982
InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 Gene3D:3.20.20.70 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0006537 GO:GO:0004355
InterPro:IPR017932 PROSITE:PS51278 Gene3D:2.160.20.60
SUPFAM:SSF69336 OMA:IEKHIAY eggNOG:COG0069 HOGENOM:HOG000031558
KO:K00265 RefSeq:YP_178036.1 ProteinModelPortal:Q5HXE9
STRING:Q5HXE9 GeneID:3230663 KEGG:cjr:CJE0007 PATRIC:20041703
ProtClustDB:CLSK878595 BioCyc:CJEJ195099:GJC0-7-MONOMER
Uniprot:Q5HXE9
Length = 1496
Score = 114 (45.2 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDL-EVIRL 100
L QVTNPP+D RE++V S +G E N+L+P R+ + P++S +L EV L
Sbjct: 519 LFAQVTNPPLDAIREEIVTSTRIYLGSEGNLLKPDENNAKRVKIALPVISNEELFEVKAL 578
Query: 101 NTHRGWKVMKVSLMADLTNES 121
N ++V + S++ D + ++
Sbjct: 579 NK---FQVKEFSILYDYSKKT 596
Score = 89 (36.4 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 20/29 (68%), Positives = 24/29 (82%)
Query: 1 MGNDAPLACLSE-FQPLLYDYFKQLFAQL 28
MG D PLA LS+ +QPL Y+YFKQLFAQ+
Sbjct: 496 MGVDTPLAILSKTYQPL-YNYFKQLFAQV 523
>UNIPROTKB|Q9KPJ1 [details] [associations]
symbol:VC_2376 "Glutamate synthase, large subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
InterPro:IPR000583 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006982 InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Gene3D:3.20.20.70 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006537 GO:GO:0004355
InterPro:IPR017932 PROSITE:PS51278 Gene3D:2.160.20.60
SUPFAM:SSF69336 OMA:RMSASIV KO:K00265 ProtClustDB:PRK11750
HSSP:P55038 PIR:F82083 RefSeq:NP_232006.1 ProteinModelPortal:Q9KPJ1
DNASU:2613045 GeneID:2613045 KEGG:vch:VC2376 PATRIC:20083775
Uniprot:Q9KPJ1
Length = 1487
Score = 121 (47.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLE 96
QVTNPPIDP REK VMSL IG E N+ + HR+ +P+L D++
Sbjct: 513 QVTNPPIDPLREKHVMSLATSIGQEMNVFCETDGHAHRVTFDSPILLYSDMQ 564
Score = 79 (32.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MG+D P+A LS + L+ DYF+Q FAQ+
Sbjct: 487 MGDDTPMAVLSSKERLISDYFRQKFAQV 514
>TIGR_CMR|VC_2376 [details] [associations]
symbol:VC_2376 "glutamate synthase, large subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006982
InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 Gene3D:3.20.20.70 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006537 GO:GO:0004355
InterPro:IPR017932 PROSITE:PS51278 Gene3D:2.160.20.60
SUPFAM:SSF69336 OMA:RMSASIV KO:K00265 ProtClustDB:PRK11750
HSSP:P55038 PIR:F82083 RefSeq:NP_232006.1 ProteinModelPortal:Q9KPJ1
DNASU:2613045 GeneID:2613045 KEGG:vch:VC2376 PATRIC:20083775
Uniprot:Q9KPJ1
Length = 1487
Score = 121 (47.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLE 96
QVTNPPIDP REK VMSL IG E N+ + HR+ +P+L D++
Sbjct: 513 QVTNPPIDPLREKHVMSLATSIGQEMNVFCETDGHAHRVTFDSPILLYSDMQ 564
Score = 79 (32.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MG+D P+A LS + L+ DYF+Q FAQ+
Sbjct: 487 MGDDTPMAVLSSKERLISDYFRQKFAQV 514
>TAIR|locus:2040317 [details] [associations]
symbol:GLU2 "glutamate synthase 2" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006537 "glutamate biosynthetic process"
evidence=IEA] [GO:0006807 "nitrogen compound metabolic process"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0015930 "glutamate
synthase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016638 "oxidoreductase activity,
acting on the CH-NH2 group of donors" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0000041 "transition metal
ion transport" evidence=RCA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009536 "plastid" evidence=IDA] [GO:0016041
"glutamate synthase (ferredoxin) activity" evidence=ISS]
InterPro:IPR000583 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006982 InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 UniPathway:UPA00045 UniPathway:UPA00634
GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0009941 GO:GO:0051538
EMBL:AC005662 GO:GO:0006541 InterPro:IPR017932 PROSITE:PS51278
Gene3D:2.160.20.60 SUPFAM:SSF69336 GO:GO:0097054 eggNOG:COG0069
HOGENOM:HOG000031558 KO:K00284 ProtClustDB:CLSN2913236
GO:GO:0016041 EMBL:U39288 IPI:IPI00533390 PIR:C84839
RefSeq:NP_181655.1 UniGene:At.21033 ProteinModelPortal:Q9T0P4
STRING:Q9T0P4 PaxDb:Q9T0P4 PRIDE:Q9T0P4 ProMEX:Q9T0P4
EnsemblPlants:AT2G41220.1 GeneID:818721 KEGG:ath:AT2G41220
TAIR:At2g41220 InParanoid:Q9T0P4 OMA:VNFFLYI PhylomeDB:Q9T0P4
Genevestigator:Q9T0P4 GermOnline:AT2G41220 Uniprot:Q9T0P4
Length = 1629
Score = 111 (44.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLE 96
QVTNP IDP RE +VMSL IG NILE + ++ L P+L+ +LE
Sbjct: 612 QVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPQNVSQVVLSGPVLNERELE 663
Score = 89 (36.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MG+D P+A LS+ +LYDYFKQ FAQ+
Sbjct: 586 MGDDTPVAVLSQKPHMLYDYFKQRFAQV 613
>UNIPROTKB|Q4KJI6 [details] [associations]
symbol:gltB "Glutamate synthase, large subunit"
species:220664 "Pseudomonas protegens Pf-5" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006982
InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 Gene3D:3.20.20.70 EMBL:CP000076 GO:GO:0006537
GO:GO:0004355 InterPro:IPR017932 PROSITE:PS51278 Gene3D:2.160.20.60
SUPFAM:SSF69336 eggNOG:COG0069 HOGENOM:HOG000031558 KO:K00265
ProtClustDB:PRK11750 RefSeq:YP_257597.2 GeneID:3481044
KEGG:pfl:PFL_0453 PATRIC:19870051
BioCyc:PFLU220664:GIX8-454-MONOMER Uniprot:Q4KJI6
Length = 1482
Score = 123 (48.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLS 91
QVTNPPIDP RE +VMSL +G E NI + S + R+ L +P++S
Sbjct: 513 QVTNPPIDPLREAIVMSLEICLGAERNIFQESPEHASRVILSSPVIS 559
Score = 76 (31.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MG+D P+A LS+ YDYF+Q FAQ+
Sbjct: 487 MGDDTPMAVLSQRVRTPYDYFRQQFAQV 514
>TIGR_CMR|SO_1325 [details] [associations]
symbol:SO_1325 "glutamate synthase, large subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] [GO:0015930 "glutamate synthase
activity" evidence=ISS] InterPro:IPR000583 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006982 InterPro:IPR013785
Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Gene3D:3.20.20.70 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0006537 GO:GO:0004355 InterPro:IPR017932 PROSITE:PS51278
Gene3D:2.160.20.60 SUPFAM:SSF69336 OMA:PPAWQSN HOGENOM:HOG000031558
KO:K00265 ProtClustDB:PRK11750 HSSP:P55038 RefSeq:NP_716945.1
ProteinModelPortal:Q8EHA4 GeneID:1169146 KEGG:son:SO_1325
PATRIC:23522306 Uniprot:Q8EHA4
Length = 1482
Score = 115 (45.5 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 24/50 (48%), Positives = 30/50 (60%)
Query: 45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYD 94
QVTNPPIDP REK VMSL IG E N+ + +R+ +P+L D
Sbjct: 513 QVTNPPIDPLREKHVMSLATCIGREQNLFNETTGHAYRVMFNSPILLFSD 562
Score = 83 (34.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MG+D P+A LS+ LYDYF+Q FAQ+
Sbjct: 487 MGDDTPMAVLSKKSRSLYDYFRQKFAQV 514
>TIGR_CMR|CPS_4501 [details] [associations]
symbol:CPS_4501 "glutamate synthase, large subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006982
InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 Gene3D:3.20.20.70 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006537 GO:GO:0004355
InterPro:IPR017932 PROSITE:PS51278 Gene3D:2.160.20.60
SUPFAM:SSF69336 eggNOG:COG0069 HOGENOM:HOG000031558 OMA:RMSASIV
KO:K00265 ProtClustDB:PRK11750 RefSeq:YP_271149.1
ProteinModelPortal:Q47VM3 STRING:Q47VM3 GeneID:3519028
KEGG:cps:CPS_4501 PATRIC:21471825
BioCyc:CPSY167879:GI48-4510-MONOMER Uniprot:Q47VM3
Length = 1486
Score = 113 (44.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDLEVIR 99
QVTNPPIDP RE+ VMSL IG E N+ ++ R+ P+L L+ +R
Sbjct: 512 QVTNPPIDPLRERYVMSLGTCIGREHNVFNETSGHADRMLFSTPVLMYTGLKQLR 566
Score = 82 (33.9 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MG+D P+A LS LYDYF+Q FAQ+
Sbjct: 486 MGDDTPMAVLSSQTRTLYDYFRQQFAQV 513
>SGD|S000002330 [details] [associations]
symbol:GLT1 "NAD(+)-dependent glutamate synthase (GOGAT)"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0006541 "glutamine metabolic process"
evidence=IEA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0015930
"glutamate synthase activity" evidence=IEA] [GO:0016639
"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0045181 "glutamate synthase
activity, NAD(P)H as acceptor" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0006537 "glutamate biosynthetic process"
evidence=IEA;IEP] [GO:0006807 "nitrogen compound metabolic process"
evidence=IEA] [GO:0016040 "glutamate synthase (NADH) activity"
evidence=IEA;IMP;IDA] [GO:0019676 "ammonia assimilation cycle"
evidence=IEP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0097054 "L-glutamate biosynthetic process" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051538 "3 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0016638 "oxidoreductase activity, acting
on the CH-NH2 group of donors" evidence=IEA] InterPro:IPR000583
InterPro:IPR001327 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006005 InterPro:IPR006982 InterPro:IPR009051
InterPro:IPR012220 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR023753 Pfam:PF00070 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187
UniPathway:UPA00045 UniPathway:UPA00634 InterPro:IPR016040
SGD:S000002330 GO:GO:0005739 Gene3D:3.20.20.70 Gene3D:3.40.50.720
GO:GO:0005506 GO:GO:0050660 EMBL:BK006938 GO:GO:0051538
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 EMBL:Z67750
GO:GO:0019676 GO:GO:0010181 InterPro:IPR017932 PROSITE:PS51278
SUPFAM:SSF46548 GeneTree:ENSGT00500000044896 Gene3D:2.160.20.60
SUPFAM:SSF69336 KO:K00264 GO:GO:0016040 GO:GO:0097054
TIGRFAMs:TIGR01317 HOGENOM:HOG000031559 OrthoDB:EOG444PTC
EMBL:X89221 EMBL:Z74219 PIR:S61041 RefSeq:NP_010110.1
ProteinModelPortal:Q12680 SMR:Q12680 DIP:DIP-6490N IntAct:Q12680
MINT:MINT-647261 STRING:Q12680 PaxDb:Q12680 PeptideAtlas:Q12680
PRIDE:Q12680 EnsemblFungi:YDL171C GeneID:851383 KEGG:sce:YDL171C
CYGD:YDL171c OMA:WMAARQA BioCyc:MetaCyc:MONOMER-13146
SABIO-RK:Q12680 NextBio:968525 Genevestigator:Q12680
GermOnline:YDL171C Uniprot:Q12680
Length = 2145
Score = 165 (63.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 36/89 (40%), Positives = 51/89 (57%)
Query: 30 PVLLSVTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPL 89
PVLL + L QVTNPPIDP RE VMSL C +GP+ N+LE + QC RL L +P+
Sbjct: 557 PVLLY--DYFRQLFAQVTNPPIDPIREANVMSLECYVGPQGNLLEMHSSQCDRLLLKSPI 614
Query: 90 LSLYDLEVIRL--NTHRGWKVMKVSLMAD 116
L + + ++ + W V ++ + D
Sbjct: 615 LHWNEFQALKNIEAAYPSWSVAEIDITFD 643
Score = 116 (45.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 22/28 (78%), Positives = 25/28 (89%)
Query: 1 MGNDAPLACLSEFQPLLYDYFKQLFAQL 28
MGNDAPLACL+E LLYDYF+QLFAQ+
Sbjct: 544 MGNDAPLACLNENPVLLYDYFRQLFAQV 571
>UNIPROTKB|Q9KPJ4 [details] [associations]
symbol:VC_2373 "Glutamate synthase, large subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
[GO:0015930 "glutamate synthase activity" evidence=ISS]
InterPro:IPR000583 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006982 InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Gene3D:3.20.20.70 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006537 InterPro:IPR017932
PROSITE:PS51278 Gene3D:2.160.20.60 SUPFAM:SSF69336 OMA:WMAARQA
KO:K00265 HSSP:P55038 GO:GO:0015930 ProtClustDB:CLSK874778
PIR:E82085 RefSeq:NP_232003.1 ProteinModelPortal:Q9KPJ4
DNASU:2613042 GeneID:2613042 KEGG:vch:VC2373 PATRIC:20083771
Uniprot:Q9KPJ4
Length = 1530
Score = 139 (54.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 35 VTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYD 94
++ + L QVTNPPIDP RE++VMSL IG + N+L + C ++ L +P++S +
Sbjct: 533 LSNYFKQLFAQVTNPPIDPIRERMVMSLNTYIGRDQNLLAETPAHCRKVELESPVISNAE 592
Query: 95 LEVIRL--NTHRGWKVMKVSLMA 115
LE IR N H K + + A
Sbjct: 593 LEKIRAIDNEHLQAKTLDIVFRA 615
>TIGR_CMR|VC_2373 [details] [associations]
symbol:VC_2373 "glutamate synthase, large subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006537
"glutamate biosynthetic process" evidence=ISS] [GO:0015930
"glutamate synthase activity" evidence=ISS] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006982
InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 Gene3D:3.20.20.70 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006537 InterPro:IPR017932
PROSITE:PS51278 Gene3D:2.160.20.60 SUPFAM:SSF69336 OMA:WMAARQA
KO:K00265 HSSP:P55038 GO:GO:0015930 ProtClustDB:CLSK874778
PIR:E82085 RefSeq:NP_232003.1 ProteinModelPortal:Q9KPJ4
DNASU:2613042 GeneID:2613042 KEGG:vch:VC2373 PATRIC:20083771
Uniprot:Q9KPJ4
Length = 1530
Score = 139 (54.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 35 VTTMYCSLSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYD 94
++ + L QVTNPPIDP RE++VMSL IG + N+L + C ++ L +P++S +
Sbjct: 533 LSNYFKQLFAQVTNPPIDPIRERMVMSLNTYIGRDQNLLAETPAHCRKVELESPVISNAE 592
Query: 95 LEVIRL--NTHRGWKVMKVSLMA 115
LE IR N H K + + A
Sbjct: 593 LEKIRAIDNEHLQAKTLDIVFRA 615
>UNIPROTKB|P96218 [details] [associations]
symbol:gltB "Glutamate synthase [NADPH] large chain"
species:1773 "Mycobacterium tuberculosis" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR000583 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006982 InterPro:IPR013785
Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
UniPathway:UPA00634 GO:GO:0005829 GO:GO:0005886 GO:GO:0040007
Gene3D:3.20.20.70 GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842584 GO:GO:0051538 GO:GO:0004355 GO:GO:0006541
InterPro:IPR017932 PROSITE:PS51278 Gene3D:2.160.20.60
SUPFAM:SSF69336 GO:GO:0097054 HOGENOM:HOG000031559 OMA:WMAARQA
KO:K00265 PIR:H70655 RefSeq:NP_218376.1 RefSeq:YP_006517359.1
HSSP:P55038 ProteinModelPortal:P96218 PhosSite:P12071643
PRIDE:P96218 EnsemblBacteria:EBMYCT00000001529 GeneID:13317486
GeneID:886195 KEGG:mtu:Rv3859c KEGG:mtv:RVBD_3859c PATRIC:18157202
TubercuList:Rv3859c ProtClustDB:CLSK792766 Uniprot:P96218
Length = 1527
Score = 131 (51.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 42 LSLQVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLSLYDL 95
L QVTNPP+D RE+VV SL G E ++L P CH++ LP P+L ++L
Sbjct: 518 LFAQVTNPPLDAIREEVVTSLQGTTGGERDLLNPDQNSCHQIVLPQPILRNHEL 571
>UNIPROTKB|Q0C616 [details] [associations]
symbol:gltB "Glutamate synthase, large subunit"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] [GO:0009342
"glutamate synthase complex (NADPH)" evidence=ISS]
InterPro:IPR000583 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006982 InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Gene3D:3.20.20.70 GO:GO:0006537
GO:GO:0004355 InterPro:IPR017932 PROSITE:PS51278 EMBL:CP000158
GenomeReviews:CP000158_GR Gene3D:2.160.20.60 SUPFAM:SSF69336
OMA:PPAWQSN eggNOG:COG0069 HOGENOM:HOG000031558 KO:K00265
RefSeq:YP_758827.1 ProteinModelPortal:Q0C616 STRING:Q0C616
GeneID:4287229 KEGG:hne:HNE_0093 PATRIC:32212970
ProtClustDB:CLSK891594 BioCyc:HNEP228405:GI69-140-MONOMER
GO:GO:0009342 Uniprot:Q0C616
Length = 1513
Score = 94 (38.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 45 QVTNPPIDPFREKVVMSLMCPIGPEANILEPSAKQCHRLFLPNPLLS--LYDLEVIRLNT 102
QVTNPPIDP RE VMSL N+L+ Q L +P+L+ +Y + R+
Sbjct: 532 QVTNPPIDPLREGRVMSLRTRFKNLGNVLDTDKSQQEVFVLESPVLTTGMYQRLIERIGL 591
Query: 103 HRGWKVMKVSL-MADLTNE 120
G +++ + AD+T E
Sbjct: 592 --GTEIIDCTFDAADVTFE 608
Score = 45 (20.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 1 MGND-APLACLSEFQPLLYDYFKQLFAQL 28
MG+D AP ++P+ + +F+Q F+Q+
Sbjct: 506 MGDDTAPAVLTMAYRPMSH-FFRQNFSQV 533
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.138 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 121 121 0.00091 102 3 11 22 0.46 30
29 0.49 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 570 (61 KB)
Total size of DFA: 126 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.01u 0.17s 13.18t Elapsed: 00:00:00
Total cpu time: 13.02u 0.17s 13.19t Elapsed: 00:00:00
Start: Thu Aug 15 11:01:15 2013 End: Thu Aug 15 11:01:15 2013