Query psy12797
Match_columns 66
No_of_seqs 138 out of 756
Neff 5.7
Searched_HMMs 46136
Date Fri Aug 16 19:51:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12797.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12797hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd00713 GltS Glutamine amidotr 99.9 2.1E-23 4.5E-28 153.8 4.4 66 1-66 128-195 (413)
2 PF00310 GATase_2: Glutamine a 99.9 2.2E-22 4.8E-27 145.9 3.6 65 1-66 125-189 (361)
3 PRK11750 gltB glutamate syntha 99.8 1.3E-21 2.9E-26 159.1 5.2 65 1-66 140-206 (1485)
4 COG0067 GltB Glutamate synthas 99.8 6.4E-21 1.4E-25 139.2 3.4 61 1-66 136-196 (371)
5 KOG0399|consensus 99.8 5.4E-20 1.2E-24 148.6 3.7 65 1-66 207-278 (2142)
6 cd01907 GlxB Glutamine amidotr 91.9 0.08 1.7E-06 36.6 1.2 48 16-63 16-71 (249)
7 PF00159 Hormone_3: Pancreatic 34.4 5.6 0.00012 20.5 -1.4 12 54-65 13-24 (36)
8 cd00126 PAH Pancreatic Hormone 33.2 7.5 0.00016 20.0 -1.1 12 54-65 13-24 (36)
9 PF01701 PSI_PsaJ: Photosystem 32.8 17 0.00038 18.9 0.3 9 57-65 28-36 (37)
10 smart00309 PAH Pancreatic horm 31.7 8.2 0.00018 19.9 -1.1 13 53-65 12-24 (36)
11 COG4905 Predicted membrane pro 28.7 17 0.00037 25.6 -0.2 21 37-57 22-42 (243)
12 PRK02733 photosystem I reactio 26.1 23 0.00049 18.9 0.0 9 57-65 28-36 (42)
13 COG4741 Predicted secreted end 26.0 28 0.0006 23.7 0.4 18 48-66 86-103 (175)
14 CHL00105 psaJ photosystem I su 24.9 26 0.00057 18.6 0.1 9 57-65 28-36 (42)
15 smart00531 TFIIE Transcription 24.2 1.3E+02 0.0029 19.0 3.4 33 14-46 75-108 (147)
16 PRK06266 transcription initiat 20.8 1.7E+02 0.0037 19.4 3.4 29 14-42 93-122 (178)
No 1
>cd00713 GltS Glutamine amidotransferases class-II (Gn-AT), glutamate synthase (GltS)-type. GltS is a homodimer that synthesizes L-glutamate from 2-oxoglutarate and L-glutamine, an important step in ammonia assimilation in bacteria, cyanobacteria and plants. The N-terminal glutaminase domain catalyzes the hydrolysis of glutamine to glutamic acid and ammonia, and has a fold similar to that of other glutamine amidotransferases such as glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), and beta lactam synthetase (beta-LS), as well as the Ntn hydrolase folds of the proteasomal alpha and beta subunits.
Probab=99.88 E-value=2.1e-23 Score=153.78 Aligned_cols=66 Identities=41% Similarity=0.798 Sum_probs=56.9
Q ss_pred CEEEEEcCC--CChHHHHHHHHHHHHHHhhhCCCCCCceEEeccCcchhhhhcccChhchhhhccCCC
Q psy12797 1 MRQVFLTGK--QDEEEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQLWKYFTDLN 66 (66)
Q Consensus 1 i~Qvfv~~~--~~~~~fer~Ly~~Rk~~e~~~~~~~~~fYi~SLSs~tivYKGml~~~qL~~fy~DL~ 66 (66)
|+|+||.++ .+..+|||+||++||++|+.+.....+|||||||++|||||||++|+||..||+||+
T Consensus 128 i~Q~fv~~~~~~~~~~~er~l~~~r~~~e~~~~~~~~~~yv~Sls~~~iVyKGm~~~~~v~~~Y~DL~ 195 (413)
T cd00713 128 IEQVFVGAPSGDDGEAFERKLYLLRKRIEKAIRAADEDFYVCSLSSRTIVYKGMLLPEQLGQFYPDLQ 195 (413)
T ss_pred EEEEEEecCCccCcchHHHHHHHHHHHHHHHHHhcCCCEEEEecccceEEEeccccHHHHHHhccccC
Confidence 799999754 234679999999999999976432246999999999999999999999999999985
No 2
>PF00310 GATase_2: Glutamine amidotransferases class-II; InterPro: IPR000583 A large group of biosynthetic enzymes are able to catalyse the removal of the ammonia group from glutamine and then to transfer this group to a substrate to form a new carbon-nitrogen group. This catalytic activity is known as glutamine amidotransferase (GATase) (2.4.2 from EC) []. The GATase domain exists either as a separate polypeptidic subunit or as part of a larger polypeptide fused in different ways to a synthase domain. On the basis of sequence similarities two classes of GATase domains have been identified [, ], class-I (also known as trpG-type) and class-II (also known as purF-type). Enzymes containing Class-II GATase domains include amido phosphoribosyltransferase (glutamine phosphoribosylpyrophosphate amidotransferase) (2.4.2.14 from EC), which catalyses the first step in purine biosynthesis (gene purF in bacteria, ADE4 in yeast); glucosamine--fructose-6-phosphate aminotransferase (2.6.1.16 from EC), which catalyses the formation of glucosamine 6-phosphate from fructose 6-phosphate and glutamine (gene glmS in Escherichia coli, nodM in Rhizobium, GFA1 in yeast); and asparagine synthetase (glutamine-hydrolizing) (6.3.5.4 from EC), which is responsible for the synthesis of asparagine from aspartate and glutamine. A cysteine is present at the N-terminal extremity of the mature form of all these enzymes. This domain is found in a number of cysteine peptidases belonging to MEROPS peptidase family C44 and their non-peptidase homologs. ; GO: 0008152 metabolic process; PDB: 1OFE_A 1LLW_A 1OFD_A 1LLZ_A 1LM1_A 1GPH_1 1AO0_D 3OOJ_E 1JXA_C 2J6H_B ....
Probab=99.85 E-value=2.2e-22 Score=145.87 Aligned_cols=65 Identities=43% Similarity=0.791 Sum_probs=55.6
Q ss_pred CEEEEEcCCCChHHHHHHHHHHHHHHhhhCCCCCCceEEeccCcchhhhhcccChhchhhhccCCC
Q psy12797 1 MRQVFLTGKQDEEEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQLWKYFTDLN 66 (66)
Q Consensus 1 i~Qvfv~~~~~~~~fer~Ly~~Rk~~e~~~~~~~~~fYi~SLSs~tivYKGml~~~qL~~fy~DL~ 66 (66)
|+|+||..+..+.+||++||++||++|+.....+ .|||||||++|||||||++|+||.+||+||+
T Consensus 125 i~Q~fv~~~~~~~~~e~~l~~~rk~~e~~~~~~~-~~yv~SlS~~tivYKg~~~~~~l~~~y~Dl~ 189 (361)
T PF00310_consen 125 IWQVFVAPPEGEEEFERRLYLIRKRIEKAIEEDD-AFYVCSLSSRTIVYKGMGTPEQLAEFYPDLQ 189 (361)
T ss_dssp EEEEEEE-TT-HHHHHHHHHHHHHHHHHHHCCHT-TBEEEEEESSEEEEEECC-GGGHHHHCCGGG
T ss_pred EEEEEEECCcchhhHHHHHHHHHHHHHHhhhhcC-CEEEEecCcchhhhhhccCHHHHHHHHHhhc
Confidence 6899998664478999999999999999875432 4999999999999999999999999999985
No 3
>PRK11750 gltB glutamate synthase subunit alpha; Provisional
Probab=99.84 E-value=1.3e-21 Score=159.09 Aligned_cols=65 Identities=31% Similarity=0.731 Sum_probs=56.2
Q ss_pred CEEEEEcCC--CChHHHHHHHHHHHHHHhhhCCCCCCceEEeccCcchhhhhcccChhchhhhccCCC
Q psy12797 1 MRQVFLTGK--QDEEEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQLWKYFTDLN 66 (66)
Q Consensus 1 i~Qvfv~~~--~~~~~fer~Ly~~Rk~~e~~~~~~~~~fYi~SLSs~tivYKGml~~~qL~~fy~DL~ 66 (66)
|+|+||.++ .+..+|||+||++||++|+...+. .+|||||||++|||||||++|+||.+||+||+
T Consensus 140 i~Q~fv~~~~~~~~~~fer~Ly~~R~~~e~~~~~~-~~~Yi~SlS~rtiVYKGml~~~ql~~fY~DL~ 206 (1485)
T PRK11750 140 IEQVFVNAPAGWRERDFERRLFIARRRIEKRLADD-KDFYVCSLSNLVIIYKGLMMPADLPRFYLDLA 206 (1485)
T ss_pred EEEEEEccCCCCChhhHHHHHHHHHHHHHHhhccC-CCEEEEecCCCcceeEecccHHHHHHhhhhhC
Confidence 799999753 244579999999999999875332 36999999999999999999999999999995
No 4
>COG0067 GltB Glutamate synthase domain 1 [Amino acid transport and metabolism]
Probab=99.82 E-value=6.4e-21 Score=139.24 Aligned_cols=61 Identities=34% Similarity=0.737 Sum_probs=55.4
Q ss_pred CEEEEEcCCCChHHHHHHHHHHHHHHhhhCCCCCCceEEeccCcchhhhhcccChhchhhhccCCC
Q psy12797 1 MRQVFLTGKQDEEEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQLWKYFTDLN 66 (66)
Q Consensus 1 i~Qvfv~~~~~~~~fer~Ly~~Rk~~e~~~~~~~~~fYi~SLSs~tivYKGml~~~qL~~fy~DL~ 66 (66)
|+|+||. .+..+|||+||++||++|+++.. +|||||+|++|||||||++|+||.+||+||+
T Consensus 136 ~~qv~i~--~~~~~~e~~l~i~r~~~~~~~~~---~~yv~S~s~~t~VYKG~~~p~~V~~~y~dl~ 196 (371)
T COG0067 136 IEQVFIG--ASGDDFERVLFIARKRIEKRIGA---DFYVCSLSSRTIVYKGVGLPEDVAEFYLDLD 196 (371)
T ss_pred hheeEee--cCchhhhhhhhhhhhhhhhcccC---CEEEEecCCCeEEEecccCHHHHHHHHhhcc
Confidence 6899997 35678999999999999998754 6999999999999999999999999999985
No 5
>KOG0399|consensus
Probab=99.79 E-value=5.4e-20 Score=148.56 Aligned_cols=65 Identities=46% Similarity=0.901 Sum_probs=55.8
Q ss_pred CEEEEEc-------CCCChHHHHHHHHHHHHHHhhhCCCCCCceEEeccCcchhhhhcccChhchhhhccCCC
Q psy12797 1 MRQVFLT-------GKQDEEEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQLWKYFTDLN 66 (66)
Q Consensus 1 i~Qvfv~-------~~~~~~~fer~Ly~~Rk~~e~~~~~~~~~fYi~SLSs~tivYKGml~~~qL~~fy~DL~ 66 (66)
|.|+|+- +..+.++|||.||++||+++.++... .+|||||||++|||||||+.|+||..||+||+
T Consensus 207 i~Qv~l~p~~~~~~ae~~~~~fer~ly~lRk~~~~~i~~~-~e~YvcSLsn~TIVYKGql~~~ql~~yY~DL~ 278 (2142)
T KOG0399|consen 207 ILQVFLFPTYDAIYAEFDTDKFERSLYLLRKQASLQIGKE-KEFYVCSLSNQTIVYKGQLRPEQLYNYYPDLT 278 (2142)
T ss_pred hhhhccccchhcccccccHHHHHHHHHHHHHHHHHhhhhc-ceEEEEeccCceEEEecccCHHHHhhhccccc
Confidence 5788652 11356889999999999999987654 47999999999999999999999999999996
No 6
>cd01907 GlxB Glutamine amidotransferases class-II (Gn-AT)_GlxB-type. GlxB is a glutamine amidotransferase-like protein of unknown function found in bacteria and archaea. GlxB has a structural fold similar to that of other class II glutamine amidotransferases including glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The GlxB fold is also somewhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.
Probab=91.94 E-value=0.08 Score=36.61 Aligned_cols=48 Identities=13% Similarity=0.233 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhhhCC-CC-C------CceEEeccCcchhhhhcccChhchhhhcc
Q psy12797 16 KRQIYVLRKVSTHKIP-KP-G------QRFYICSLSNRIVVYKGQFTADQLWKYFT 63 (66)
Q Consensus 16 er~Ly~~Rk~~e~~~~-~~-~------~~fYi~SLSs~tivYKGml~~~qL~~fy~ 63 (66)
...++..-..++++-. +. + .++|+.|+|+++.+|||+..+.++.++|.
T Consensus 16 ~~~~~~~l~~lqhRG~~dsaGia~~~~~~~~~~s~~~~~~~~K~~G~~~~v~~~~~ 71 (249)
T cd01907 16 GALLVEMLDAMQERGPGDGAGFALYGDPDAFVYSSGKDMEVFKGVGYPEDIARRYD 71 (249)
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEEcCCCeEEEecCCCeEEEeeccCHHHHHhhcC
Confidence 3456666677787765 32 2 24688899999999999999999999885
No 7
>PF00159 Hormone_3: Pancreatic hormone peptide; InterPro: IPR001955 Pancreatic hormone (PP) [] is a peptide synthesized in pancreatic islets of Langherhans, which acts as a regulator of pancreatic and gastrointestinal functions. The hormone is produced as a larger propeptide, which is enzymatically cleaved to yield the mature active peptide: this is 36 amino acids in length [] and has an amidated C terminus []. The hormone has a globular structure, residues 2-8 forming a left-handed poly-proline-II-like helix, residues 9-13 a beta turn, and 14-32 an alpha-helix,held close to the first helix by hydrophobic interactions []. Unlike glucagon, another peptide hormone, the structure of pancreatic peptide is preserved in aqueous solution []. Both N and C termini are required for activity: receptor binding and activation functions may reside in the N and C termini respectively []. Pancreatic hormone is part of a wider family of active peptides that includes: Neuropeptide Y (NPY) [], one of the most abundant peptides in the mammalian nervous system. NPY is implicated in the control of feeding and the secretion of the gonadotrophin-releasing hormone. Peptide YY (PYY) []. PPY is a gut peptide that inhibits exocrine pancreatic secretion, has a vasoconstrictory action and inhibits jejunal and colonic mobility. Various NPY and PYY-like polypeptides from fish and amphibians [, ]. Neuropeptide F (NPF) from invertebrates such as worms and snail. Skin peptide Tyr-Tyr (SPYY) from the frog Phyllomedusa bicolor. SPYY shows a large spectra of antibacterial and antifungal activity. All these peptides are 36 to 39 amino acids long. Like most active peptides, their C-terminal is amidated and they are synthesized as larger protein precursors.; GO: 0005179 hormone activity, 0005576 extracellular region; PDB: 1LJV_A 1BBA_A 1V1D_A 1PPT_A 2H3T_A 2H4B_A 2BF9_A 2H3S_B 1K8V_A 2DF0_A ....
Probab=34.42 E-value=5.6 Score=20.49 Aligned_cols=12 Identities=25% Similarity=0.703 Sum_probs=9.7
Q ss_pred ChhchhhhccCC
Q psy12797 54 TADQLWKYFTDL 65 (66)
Q Consensus 54 ~~~qL~~fy~DL 65 (66)
++++|.+|+.+|
T Consensus 13 speel~~Y~~~L 24 (36)
T PF00159_consen 13 SPEELAQYYAAL 24 (36)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 578888888776
No 8
>cd00126 PAH Pancreatic Hormone domain, a regulator of pancreatic and gastrointestinal functions; neuropeptide Y (NPY)b, peptide YY (PYY), and pancreatic polypetide (PP) are closely related; propeptide is enzymatically cleaved to yield the mature active peptide with amidated C-terminal ends; receptor binding and activation functions may reside in the N- and C-termini respectively; occurs in neurons, intestinal endocrine cells, and pancreas; exist as monomers and dimers
Probab=33.17 E-value=7.5 Score=20.04 Aligned_cols=12 Identities=25% Similarity=0.673 Sum_probs=9.6
Q ss_pred ChhchhhhccCC
Q psy12797 54 TADQLWKYFTDL 65 (66)
Q Consensus 54 ~~~qL~~fy~DL 65 (66)
+++||.+||.+|
T Consensus 13 ~~eel~~Y~~~L 24 (36)
T cd00126 13 SPEELRQYLAAL 24 (36)
T ss_pred CHHHHHHHHHHH
Confidence 478899988776
No 9
>PF01701 PSI_PsaJ: Photosystem I reaction centre subunit IX / PsaJ; InterPro: IPR002615 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. This family consists of the photosystem I reaction centre subunit IX or PsaJ from various organisms including Synechocystis sp. (strain PCC 6803), Pinus thunbergii (Green pine) and Zea mays (Maize). PsaJ (P19443 from SWISSPROT) is a small 4.4kDa, chloroplast encoded, hydrophobic subunit of the photosystem I reaction complex whose function is not yet fully understood []. PsaJ can be cross-linked to PsaF (P12356 from SWISSPROT) and has a single predicted transmembrane domain. It has a proposed role in maintaing PsaF in the correct orientation to allow for fast electron transfer from soluble donor proteins to P700+ [].; GO: 0015979 photosynthesis, 0009522 photosystem I; PDB: 2WSF_J 2WSC_J 2O01_J 2WSE_J 1JB0_J 3PCQ_J 3LW5_J.
Probab=32.78 E-value=17 Score=18.85 Aligned_cols=9 Identities=33% Similarity=0.907 Sum_probs=6.3
Q ss_pred chhhhccCC
Q psy12797 57 QLWKYFTDL 65 (66)
Q Consensus 57 qL~~fy~DL 65 (66)
++-+||||+
T Consensus 28 EiNRffPD~ 36 (37)
T PF01701_consen 28 EINRFFPDL 36 (37)
T ss_dssp SSTTTSTS-
T ss_pred HHHHhCCCc
Confidence 567899986
No 10
>smart00309 PAH Pancreatic hormones / neuropeptide F / peptide YY family. Pancreatic hormone is a regulator of pancreatic and gastrointestinal functions.
Probab=31.75 E-value=8.2 Score=19.92 Aligned_cols=13 Identities=23% Similarity=0.542 Sum_probs=9.9
Q ss_pred cChhchhhhccCC
Q psy12797 53 FTADQLWKYFTDL 65 (66)
Q Consensus 53 l~~~qL~~fy~DL 65 (66)
-+|+||.+||.+|
T Consensus 12 a~~e~l~~Y~~~L 24 (36)
T smart00309 12 ASPEDLRQYLAAL 24 (36)
T ss_pred CCHHHHHHHHHHH
Confidence 3678888888776
No 11
>COG4905 Predicted membrane protein [Function unknown]
Probab=28.66 E-value=17 Score=25.61 Aligned_cols=21 Identities=24% Similarity=0.504 Sum_probs=18.1
Q ss_pred eEEeccCcchhhhhcccChhc
Q psy12797 37 FYICSLSNRIVVYKGQFTADQ 57 (66)
Q Consensus 37 fYi~SLSs~tivYKGml~~~q 57 (66)
...||.|.|.+||.|-+++.-
T Consensus 22 t~fcS~~dkk~V~RGFL~Gpy 42 (243)
T COG4905 22 TIFCSVNDKKIVNRGFLTGPY 42 (243)
T ss_pred HhheeeccceeEeecccccCC
Confidence 467999999999999988753
No 12
>PRK02733 photosystem I reaction center subunit IX; Provisional
Probab=26.14 E-value=23 Score=18.90 Aligned_cols=9 Identities=33% Similarity=0.877 Sum_probs=6.3
Q ss_pred chhhhccCC
Q psy12797 57 QLWKYFTDL 65 (66)
Q Consensus 57 qL~~fy~DL 65 (66)
++-+||||+
T Consensus 28 EiNRffPD~ 36 (42)
T PRK02733 28 EFNRFFPDL 36 (42)
T ss_pred HHHHhCchH
Confidence 456788885
No 13
>COG4741 Predicted secreted endonuclease distantly related to archaeal Holliday junction resolvase [Nucleotide transport and metabolism]
Probab=26.05 E-value=28 Score=23.65 Aligned_cols=18 Identities=28% Similarity=0.599 Sum_probs=13.0
Q ss_pred hhhcccChhchhhhccCCC
Q psy12797 48 VYKGQFTADQLWKYFTDLN 66 (66)
Q Consensus 48 vYKGml~~~qL~~fy~DL~ 66 (66)
|--|.+ ++||.+|||++.
T Consensus 86 Vi~GrV-tEqlaPffp~f~ 103 (175)
T COG4741 86 VILGRV-TEQLAPFFPEFK 103 (175)
T ss_pred HHhhhh-HhhhcccccCCC
Confidence 334554 689999999863
No 14
>CHL00105 psaJ photosystem I subunit IX
Probab=24.93 E-value=26 Score=18.65 Aligned_cols=9 Identities=22% Similarity=0.715 Sum_probs=6.3
Q ss_pred chhhhccCC
Q psy12797 57 QLWKYFTDL 65 (66)
Q Consensus 57 qL~~fy~DL 65 (66)
++-+||||+
T Consensus 28 EiNRffPD~ 36 (42)
T CHL00105 28 EINRFFPDA 36 (42)
T ss_pred HHHHhCChh
Confidence 456788885
No 15
>smart00531 TFIIE Transcription initiation factor IIE.
Probab=24.20 E-value=1.3e+02 Score=18.99 Aligned_cols=33 Identities=18% Similarity=0.309 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhhhCCCC-CCceEEeccCcch
Q psy12797 14 EFKRQIYVLRKVSTHKIPKP-GQRFYICSLSNRI 46 (66)
Q Consensus 14 ~fer~Ly~~Rk~~e~~~~~~-~~~fYi~SLSs~t 46 (66)
....++..+++.++..+... +..+|+|---.++
T Consensus 75 vik~r~~~~~~~L~~~l~~e~~~~~Y~Cp~C~~~ 108 (147)
T smart00531 75 VVKYKLDKMRKRLEDKLEDETNNAYYKCPNCQSK 108 (147)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCcEEECcCCCCE
Confidence 46678888888888766432 3469999644433
No 16
>PRK06266 transcription initiation factor E subunit alpha; Validated
Probab=20.79 E-value=1.7e+02 Score=19.42 Aligned_cols=29 Identities=14% Similarity=0.258 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHhhhCCCC-CCceEEecc
Q psy12797 14 EFKRQIYVLRKVSTHKIPKP-GQRFYICSL 42 (66)
Q Consensus 14 ~fer~Ly~~Rk~~e~~~~~~-~~~fYi~SL 42 (66)
....++..+.+.++..+... +..||+|--
T Consensus 93 ~ik~~~~~~~~klk~~l~~e~~~~~Y~Cp~ 122 (178)
T PRK06266 93 IIKKKKMEELKKLKEQLEEEENNMFFFCPN 122 (178)
T ss_pred HHHHHHHHHHHHHHHHhhhccCCCEEECCC
Confidence 46667777777777766432 346999954
Done!