Your job contains 1 sequence.
>psy12797
MRQVFLTGKQDEEEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQLWK
YFTDLN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12797
(66 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0036663 - symbol:CG9674 species:7227 "Drosophila m... 219 2.5e-16 1
POMBASE|SPAPB1E7.07 - symbol:glt1 "glutamate synthase Glt... 146 1.4e-08 1
WB|WBGene00012326 - symbol:W07E11.1 species:6239 "Caenorh... 144 2.4e-08 1
TIGR_CMR|CPS_0761 - symbol:CPS_0761 "putative glutamate s... 136 1.2e-07 1
ASPGD|ASPL0000027159 - symbol:gltA species:162425 "Emeric... 135 2.1e-07 1
CGD|CAL0000516 - symbol:GLT1 species:5476 "Candida albica... 128 1.2e-06 1
UNIPROTKB|Q0JKD0 - symbol:LOC_Os01g48960 "Glutamate synth... 126 2.0e-06 1
UNIPROTKB|P55037 - symbol:gltB "Ferredoxin-dependent glut... 124 2.2e-06 1
SGD|S000002330 - symbol:GLT1 "NAD(+)-dependent glutamate ... 125 2.5e-06 1
TAIR|locus:2178461 - symbol:GLT1 "NADH-dependent glutamat... 124 3.3e-06 1
UNIPROTKB|Q9KPJ4 - symbol:VC_2373 "Glutamate synthase, la... 116 1.5e-05 1
TIGR_CMR|VC_2373 - symbol:VC_2373 "glutamate synthase, la... 116 1.5e-05 1
TAIR|locus:2146718 - symbol:GLU1 "glutamate synthase 1" s... 111 5.7e-05 1
UNIPROTKB|Q0C616 - symbol:gltB "Glutamate synthase, large... 104 0.00029 1
TIGR_CMR|SPO_3768 - symbol:SPO_3768 "glutamate synthase, ... 101 0.00060 1
>FB|FBgn0036663 [details] [associations]
symbol:CG9674 species:7227 "Drosophila melanogaster"
[GO:0004355 "glutamate synthase (NADPH) activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005506
"iron ion binding" evidence=IEA] [GO:0016040 "glutamate synthase
(NADH) activity" evidence=IEA] [GO:0010181 "FMN binding"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0006537 "glutamate biosynthetic process"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 InterPro:IPR016040 EMBL:AE014296
Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660
GO:GO:0051536 GO:GO:0006537 Gene3D:1.10.1060.10 GO:GO:0004355
GO:GO:0010181 InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
GeneTree:ENSGT00500000044896 Gene3D:2.160.20.60 SUPFAM:SSF69336
KO:K00264 GO:GO:0016040 TIGRFAMs:TIGR01317 HSSP:P55038
UniGene:Dm.11253 GeneID:39878 KEGG:dme:Dmel_CG9674
FlyBase:FBgn0036663 ChiTaRS:CG9674 GenomeRNAi:39878 NextBio:815851
EMBL:AY094734 RefSeq:NP_648922.1 RefSeq:NP_788517.1 IntAct:Q9VVA4
MINT:MINT-312597 STRING:Q9VVA4 EnsemblMetazoa:FBtr0075341
EnsemblMetazoa:FBtr0075344 UCSC:CG9674-RA InParanoid:Q9VVA4
Uniprot:Q9VVA4
Length = 2114
Score = 219 (82.2 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 41/66 (62%), Positives = 54/66 (81%)
Query: 2 RQVFLT--GKQDEEEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQLW 59
RQVF+ DE+ F+RQ++VLRK ++H++ KPG+RFYICSLS+R VVYKG FT+DQLW
Sbjct: 214 RQVFVRRPAGSDEKAFERQVFVLRKRASHELIKPGRRFYICSLSDRTVVYKGLFTSDQLW 273
Query: 60 KYFTDL 65
Y+TDL
Sbjct: 274 DYYTDL 279
>POMBASE|SPAPB1E7.07 [details] [associations]
symbol:glt1 "glutamate synthase Glt1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=IEA] [GO:0005506 "iron ion
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006537 "glutamate
biosynthetic process" evidence=ISO] [GO:0006541 "glutamine
metabolic process" evidence=IEA] [GO:0010181 "FMN binding"
evidence=IEA] [GO:0016040 "glutamate synthase (NADH) activity"
evidence=ISO] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 UniPathway:UPA00045
UniPathway:UPA00634 PomBase:SPAPB1E7.07 GO:GO:0005829 GO:GO:0005739
EMBL:CU329670 Gene3D:3.20.20.70 GO:GO:0005506 GO:GO:0050660
GO:GO:0051538 GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10
GO:GO:0004355 GO:GO:0010181 GO:GO:0006541 InterPro:IPR017932
PROSITE:PS51278 SUPFAM:SSF46548 Gene3D:2.160.20.60 SUPFAM:SSF69336
KO:K00264 GO:GO:0016040 TIGRFAMs:TIGR01317 EMBL:D89165 PIR:T42527
RefSeq:NP_594133.1 ProteinModelPortal:Q9C102 STRING:Q9C102
PRIDE:Q9C102 EnsemblFungi:SPAPB1E7.07.1 GeneID:2543509
KEGG:spo:SPAPB1E7.07 HOGENOM:HOG000031559 OMA:PPAWQSN
OrthoDB:EOG444PTC NextBio:20804519 Uniprot:Q9C102
Length = 2111
Score = 146 (56.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 11 DEEEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQLWKYFTDLN 66
D + F+RQ+YVLRK S+H I K + FYICSL +VYKGQ Q++ YF DLN
Sbjct: 214 DTDLFERQLYVLRKQSSHLIGKE-KWFYICSLHRETIVYKGQLAPVQVYNYFLDLN 268
>WB|WBGene00012326 [details] [associations]
symbol:W07E11.1 species:6239 "Caenorhabditis elegans"
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA] [GO:0015930 "glutamate synthase
activity" evidence=IEA] [GO:0016638 "oxidoreductase activity,
acting on the CH-NH2 group of donors" evidence=IEA] [GO:0016639
"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006807 "nitrogen compound
metabolic process" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898 Pfam:PF07992
PIRSF:PIRSF000187 InterPro:IPR016040 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:3.20.20.70 Gene3D:3.40.50.720
GO:GO:0005506 GO:GO:0050660 GO:GO:0051536 GO:GO:0006537
Gene3D:1.10.1060.10 GO:GO:0010181 InterPro:IPR017932
PROSITE:PS51278 SUPFAM:SSF46548 GeneTree:ENSGT00500000044896
Gene3D:2.160.20.60 SUPFAM:SSF69336 EMBL:Z49868 GO:GO:0016040
TIGRFAMs:TIGR01317 OMA:PPAWQSN EMBL:Z49889 RefSeq:NP_509693.2
ProteinModelPortal:G5EF05 SMR:G5EF05 EnsemblMetazoa:W07E11.1
GeneID:181223 KEGG:cel:CELE_W07E11.1 CTD:181223 WormBase:W07E11.1
Uniprot:G5EF05
Length = 2175
Score = 144 (55.7 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 1 MRQVFLTG---KQDEEEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQ 57
+RQVF++ + D +F+R +Y+LRK + + + K Y+CSLS +VYKGQF Q
Sbjct: 153 IRQVFVSADYAESDPAKFERSVYLLRKQAVNSMTKQEIECYVCSLSTSTIVYKGQFNTHQ 212
Query: 58 LWKYFTDL 65
L+K++ DL
Sbjct: 213 LFKFYDDL 220
>TIGR_CMR|CPS_0761 [details] [associations]
symbol:CPS_0761 "putative glutamate synthase,
ferredoxin-dependent" species:167879 "Colwellia psychrerythraea
34H" [GO:0006537 "glutamate biosynthetic process" evidence=ISS]
[GO:0016041 "glutamate synthase (ferredoxin) activity"
evidence=ISS] [GO:0019676 "ammonia assimilation cycle"
evidence=ISS] InterPro:IPR000583 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006982 InterPro:IPR013785
Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Gene3D:3.20.20.70 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0006537 InterPro:IPR017932 PROSITE:PS51278 Gene3D:2.160.20.60
SUPFAM:SSF69336 OMA:WMAARQA eggNOG:COG0069 HOGENOM:HOG000031558
KO:K00265 GO:GO:0015930 RefSeq:YP_267510.1
ProteinModelPortal:Q488K4 STRING:Q488K4 GeneID:3522248
KEGG:cps:CPS_0761 PATRIC:21464833 ProtClustDB:CLSK874778
BioCyc:CPSY167879:GI48-847-MONOMER Uniprot:Q488K4
Length = 1535
Score = 136 (52.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 1 MRQVFLT--GKQDEEEFKRQIYVLRKVSTHKIPKPG--QR--FYICSLSNRIVVYKGQFT 54
+ QVF+ +EF+R+++VLRK ++HKI G +R FY+ S+S+ +VYKGQFT
Sbjct: 148 IEQVFIAKPAALTAQEFERKLFVLRKYTSHKINASGITERDEFYVTSMSSTKIVYKGQFT 207
Query: 55 ADQLWKYFTDL 65
Q+ +Y+ DL
Sbjct: 208 TQQVRQYYLDL 218
>ASPGD|ASPL0000027159 [details] [associations]
symbol:gltA species:162425 "Emericella nidulans"
[GO:0016040 "glutamate synthase (NADH) activity"
evidence=ISA;RCA;IMP] [GO:0009064 "glutamine family amino acid
metabolic process" evidence=IGI;RCA;IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] InterPro:IPR000583 InterPro:IPR001327
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006005
InterPro:IPR006982 InterPro:IPR009051 InterPro:IPR012220
InterPro:IPR012285 InterPro:IPR013785 InterPro:IPR023753
Pfam:PF00070 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
Pfam:PF07992 PIRSF:PIRSF000187 GO:GO:0005739 Gene3D:3.20.20.70
GO:GO:0005506 GO:GO:0050660 GO:GO:0051536 EMBL:BN001305
GO:GO:0006537 Gene3D:1.10.1060.10 GO:GO:0019676 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
Gene3D:2.160.20.60 SUPFAM:SSF69336 GO:GO:0016040 TIGRFAMs:TIGR01317
OMA:WMAARQA ProteinModelPortal:C8VEZ6 EnsemblFungi:CADANIAT00003118
Uniprot:C8VEZ6
Length = 2126
Score = 135 (52.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 11 DEEEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQLWKYFTDL 65
D + F+ Q+YVLRK +TH I FY+CSLSNR +VYKGQ Q+++Y+ DL
Sbjct: 207 DTKTFELQLYVLRKRATHIIGLANW-FYLCSLSNRNIVYKGQLAPIQVYQYYHDL 260
>CGD|CAL0000516 [details] [associations]
symbol:GLT1 species:5476 "Candida albicans" [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006807 "nitrogen compound metabolic process" evidence=IEA]
InterPro:IPR000583 InterPro:IPR001327 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006005 InterPro:IPR006982
InterPro:IPR009051 InterPro:IPR012220 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR023753 Pfam:PF00070 Pfam:PF00310
Pfam:PF01493 Pfam:PF01645 Pfam:PF04898 Pfam:PF07992
PIRSF:PIRSF000187 InterPro:IPR016040 Gene3D:3.20.20.70
Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660 GO:GO:0051536
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 EMBL:AACQ01000038
SUPFAM:SSF46548 Gene3D:2.160.20.60 SUPFAM:SSF69336 KO:K00264
GO:GO:0016040 TIGRFAMs:TIGR01317 RefSeq:XP_718760.1
ProteinModelPortal:Q5AAQ5 STRING:Q5AAQ5 GeneID:3639651
KEGG:cal:CaO19.13636 CGD:CAL0069988 Uniprot:Q5AAQ5
Length = 2126
Score = 128 (50.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 13 EEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQLWKYFTDL 65
++F++++++LRK ++H I FYICSLSN+ +VYKGQ Q++ Y+ DL
Sbjct: 203 KDFEKRLFILRKQASHTIGLHNW-FYICSLSNKTIVYKGQLAPKQVYSYYHDL 254
>UNIPROTKB|Q0JKD0 [details] [associations]
symbol:LOC_Os01g48960 "Glutamate synthase 1 [NADH],
chloroplastic" species:39947 "Oryza sativa Japonica Group"
[GO:0006537 "glutamate biosynthetic process" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] [GO:0019676 "ammonia
assimilation cycle" evidence=IMP] [GO:0048589 "developmental
growth" evidence=IMP] [GO:0060359 "response to ammonium ion"
evidence=IEP] InterPro:IPR000583 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006005 InterPro:IPR006982
InterPro:IPR009051 InterPro:IPR012220 InterPro:IPR012285
InterPro:IPR013785 InterPro:IPR023753 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187
UniPathway:UPA00045 UniPathway:UPA00634 GO:GO:0009507 GO:GO:0009536
Gene3D:3.20.20.70 GO:GO:0005506 GO:GO:0050660 GO:GO:0051538
GO:GO:0006537 GO:GO:0048589 eggNOG:COG0493 Gene3D:1.10.1060.10
EMBL:AP008207 GO:GO:0019676 GO:GO:0010181 InterPro:IPR017932
PROSITE:PS51278 GO:GO:0060359 SUPFAM:SSF46548 Gene3D:2.160.20.60
SUPFAM:SSF69336 EMBL:AB008845 RefSeq:NP_001043884.1
UniGene:Os.12738 ProteinModelPortal:Q0JKD0 STRING:Q0JKD0
PRIDE:Q0JKD0 GeneID:4324398 KEGG:osa:4324398 Gramene:Q0JKD0
KO:K00264 OMA:IEKHIAY ProtClustDB:CLSN2683760 GO:GO:0016040
GO:GO:0097054 TIGRFAMs:TIGR01317 Uniprot:Q0JKD0
Length = 2167
Score = 126 (49.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 1 MRQVFLT-GKQDEEEFKRQIYVLRKVSTHKIP------KPGQR-FYICSLSNRIVVYKGQ 52
+ QVFLT E +F++Q+Y+LR++S I + G+R FY+CSLS+R +VYKGQ
Sbjct: 227 IEQVFLTKSSSSEADFEQQLYILRRLSILSIRAALNLRRGGKRDFYMCSLSSRTIVYKGQ 286
Query: 53 FTADQL-WKYFTDL 65
QL Y+ DL
Sbjct: 287 LKPCQLKGYYYADL 300
>UNIPROTKB|P55037 [details] [associations]
symbol:gltB "Ferredoxin-dependent glutamate synthase 1"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006982
InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 UniPathway:UPA00045 UniPathway:UPA00634
Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051538 EMBL:BA000022
GenomeReviews:BA000022_GR GO:GO:0006541 InterPro:IPR017932
PROSITE:PS51278 Gene3D:2.160.20.60 SUPFAM:SSF69336 GO:GO:0097054
HOGENOM:HOG000031559 OMA:WMAARQA eggNOG:COG0069 KO:K00284
GO:GO:0016041 EMBL:X80485 PIR:S60228 RefSeq:NP_440338.1
RefSeq:YP_005650395.1 ProteinModelPortal:P55037 IntAct:P55037
STRING:P55037 GeneID:12256085 GeneID:953637 KEGG:syn:sll1502
KEGG:syy:SYNGTS_0442 PATRIC:23837822 ProtClustDB:CLSK892635
Uniprot:P55037
Length = 1550
Score = 124 (48.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 28/72 (38%), Positives = 47/72 (65%)
Query: 1 MRQVFLT---GKQDEEEFKRQIYVLRKVSTH---KIPKPGQRFYICSLSNRIVVYKGQFT 54
M+QV++ G D+ +F+R++YV+RK+ TH + PK +Y+ SLS R +VYKG T
Sbjct: 170 MQQVYIARPEGLTDDLDFERKLYVIRKL-THGAIRSPKIDTYWYVASLSARTLVYKGMLT 228
Query: 55 ADQLWKYFTDLN 66
Q+ +Y+ +L+
Sbjct: 229 TAQVGQYYPELH 240
>SGD|S000002330 [details] [associations]
symbol:GLT1 "NAD(+)-dependent glutamate synthase (GOGAT)"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0006541 "glutamine metabolic process"
evidence=IEA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0015930
"glutamate synthase activity" evidence=IEA] [GO:0016639
"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0045181 "glutamate synthase
activity, NAD(P)H as acceptor" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0006537 "glutamate biosynthetic process"
evidence=IEA;IEP] [GO:0006807 "nitrogen compound metabolic process"
evidence=IEA] [GO:0016040 "glutamate synthase (NADH) activity"
evidence=IEA;IMP;IDA] [GO:0019676 "ammonia assimilation cycle"
evidence=IEP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0097054 "L-glutamate biosynthetic process" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051538 "3 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0016638 "oxidoreductase activity, acting
on the CH-NH2 group of donors" evidence=IEA] InterPro:IPR000583
InterPro:IPR001327 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006005 InterPro:IPR006982 InterPro:IPR009051
InterPro:IPR012220 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR023753 Pfam:PF00070 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187
UniPathway:UPA00045 UniPathway:UPA00634 InterPro:IPR016040
SGD:S000002330 GO:GO:0005739 Gene3D:3.20.20.70 Gene3D:3.40.50.720
GO:GO:0005506 GO:GO:0050660 EMBL:BK006938 GO:GO:0051538
GO:GO:0006537 eggNOG:COG0493 Gene3D:1.10.1060.10 EMBL:Z67750
GO:GO:0019676 GO:GO:0010181 InterPro:IPR017932 PROSITE:PS51278
SUPFAM:SSF46548 GeneTree:ENSGT00500000044896 Gene3D:2.160.20.60
SUPFAM:SSF69336 KO:K00264 GO:GO:0016040 GO:GO:0097054
TIGRFAMs:TIGR01317 HOGENOM:HOG000031559 OrthoDB:EOG444PTC
EMBL:X89221 EMBL:Z74219 PIR:S61041 RefSeq:NP_010110.1
ProteinModelPortal:Q12680 SMR:Q12680 DIP:DIP-6490N IntAct:Q12680
MINT:MINT-647261 STRING:Q12680 PaxDb:Q12680 PeptideAtlas:Q12680
PRIDE:Q12680 EnsemblFungi:YDL171C GeneID:851383 KEGG:sce:YDL171C
CYGD:YDL171c OMA:WMAARQA BioCyc:MetaCyc:MONOMER-13146
SABIO-RK:Q12680 NextBio:968525 Genevestigator:Q12680
GermOnline:YDL171C Uniprot:Q12680
Length = 2145
Score = 125 (49.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 11 DEEEFKRQIYVLRKVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQLWKYFTDL 65
+E +F+ Q+Y+LRK ++ +I FY+CSL+N +VYKGQ T Q++ Y+ DL
Sbjct: 202 NETKFRTQLYLLRKEASLQIGLENW-FYVCSLNNTTIVYKGQLTPAQVYNYYPDL 255
>TAIR|locus:2178461 [details] [associations]
symbol:GLT1 "NADH-dependent glutamate synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006537 "glutamate
biosynthetic process" evidence=IEA;IDA;IMP] [GO:0006807 "nitrogen
compound metabolic process" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA]
[GO:0015930 "glutamate synthase activity" evidence=IEA] [GO:0016040
"glutamate synthase (NADH) activity" evidence=IEA;IDA;IMP]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016638
"oxidoreductase activity, acting on the CH-NH2 group of donors"
evidence=IEA] [GO:0016639 "oxidoreductase activity, acting on the
CH-NH2 group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0042128 "nitrate assimilation" evidence=TAS] [GO:0045181
"glutamate synthase activity, NAD(P)H as acceptor" evidence=IEA]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0019676 "ammonia
assimilation cycle" evidence=IMP] [GO:0048589 "developmental
growth" evidence=IMP] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] [GO:0009536 "plastid" evidence=TAS]
InterPro:IPR000583 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006005 InterPro:IPR006982 InterPro:IPR009051
InterPro:IPR012220 InterPro:IPR012285 InterPro:IPR013785
InterPro:IPR023753 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 Pfam:PF07992 PIRSF:PIRSF000187 UniPathway:UPA00045
UniPathway:UPA00634 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046686 GO:GO:0009570
Gene3D:3.20.20.70 Gene3D:3.40.50.720 GO:GO:0005506 GO:GO:0050660
EMBL:AB020754 GO:GO:0051538 GO:GO:0006537 GO:GO:0048589
eggNOG:COG0493 Gene3D:1.10.1060.10 GO:GO:0019676 GO:GO:0010181
InterPro:IPR017932 PROSITE:PS51278 SUPFAM:SSF46548
Gene3D:2.160.20.60 SUPFAM:SSF69336 KO:K00264
ProtClustDB:CLSN2683760 GO:GO:0016040 GO:GO:0097054
TIGRFAMs:TIGR01317 HOGENOM:HOG000031559 OMA:WMAARQA HSSP:P55038
EMBL:AY099795 EMBL:AK222185 EMBL:AK230382 IPI:IPI00521970
RefSeq:NP_001190529.1 RefSeq:NP_001190530.1 RefSeq:NP_200158.2
UniGene:At.67093 UniGene:At.8951 ProteinModelPortal:Q9LV03
SMR:Q9LV03 STRING:Q9LV03 PaxDb:Q9LV03 PRIDE:Q9LV03
EnsemblPlants:AT5G53460.1 EnsemblPlants:AT5G53460.2
EnsemblPlants:AT5G53460.3 GeneID:835427 KEGG:ath:AT5G53460
TAIR:At5g53460 InParanoid:Q9LV03 PhylomeDB:Q9LV03 BRENDA:1.4.1.14
Genevestigator:Q9LV03 Uniprot:Q9LV03
Length = 2208
Score = 124 (48.7 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 3 QVFLTGK-QDEEEFKRQIYVLRKVSTHKIP-----KPG--QRFYICSLSNRIVVYKGQFT 54
QVFLT + + +F++Q+Y+LR+VS I + G + FYICSLS+R +VYKGQ
Sbjct: 246 QVFLTPTTKSKADFEQQMYILRRVSMVAIRAALNLQHGAMKDFYICSLSSRTIVYKGQLK 305
Query: 55 ADQLWKYF-TDL 65
DQL Y+ DL
Sbjct: 306 PDQLKDYYYADL 317
>UNIPROTKB|Q9KPJ4 [details] [associations]
symbol:VC_2373 "Glutamate synthase, large subunit"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006537 "glutamate biosynthetic process" evidence=ISS]
[GO:0015930 "glutamate synthase activity" evidence=ISS]
InterPro:IPR000583 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006982 InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Gene3D:3.20.20.70 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006537 InterPro:IPR017932
PROSITE:PS51278 Gene3D:2.160.20.60 SUPFAM:SSF69336 OMA:WMAARQA
KO:K00265 HSSP:P55038 GO:GO:0015930 ProtClustDB:CLSK874778
PIR:E82085 RefSeq:NP_232003.1 ProteinModelPortal:Q9KPJ4
DNASU:2613042 GeneID:2613042 KEGG:vch:VC2373 PATRIC:20083771
Uniprot:Q9KPJ4
Length = 1530
Score = 116 (45.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 4 VFLTGK--QDEEEFKRQIYVLR----KVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQ 57
VF++G +E +R++YVLR +V + G FYI S+S + +VYKGQ T +Q
Sbjct: 167 VFISGGPGMQPDELERKLYVLRNYTVRVCLESVSNIGDDFYINSMSYKTLVYKGQLTTEQ 226
Query: 58 LWKYFTDL 65
+ +YF DL
Sbjct: 227 VPQYFLDL 234
>TIGR_CMR|VC_2373 [details] [associations]
symbol:VC_2373 "glutamate synthase, large subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006537
"glutamate biosynthetic process" evidence=ISS] [GO:0015930
"glutamate synthase activity" evidence=ISS] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006982
InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 Gene3D:3.20.20.70 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006537 InterPro:IPR017932
PROSITE:PS51278 Gene3D:2.160.20.60 SUPFAM:SSF69336 OMA:WMAARQA
KO:K00265 HSSP:P55038 GO:GO:0015930 ProtClustDB:CLSK874778
PIR:E82085 RefSeq:NP_232003.1 ProteinModelPortal:Q9KPJ4
DNASU:2613042 GeneID:2613042 KEGG:vch:VC2373 PATRIC:20083771
Uniprot:Q9KPJ4
Length = 1530
Score = 116 (45.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 4 VFLTGK--QDEEEFKRQIYVLR----KVSTHKIPKPGQRFYICSLSNRIVVYKGQFTADQ 57
VF++G +E +R++YVLR +V + G FYI S+S + +VYKGQ T +Q
Sbjct: 167 VFISGGPGMQPDELERKLYVLRNYTVRVCLESVSNIGDDFYINSMSYKTLVYKGQLTTEQ 226
Query: 58 LWKYFTDL 65
+ +YF DL
Sbjct: 227 VPQYFLDL 234
>TAIR|locus:2146718 [details] [associations]
symbol:GLU1 "glutamate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006537 "glutamate biosynthetic process"
evidence=IEA] [GO:0006807 "nitrogen compound metabolic process"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0015930 "glutamate
synthase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016638 "oxidoreductase activity,
acting on the CH-NH2 group of donors" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=IEP] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009853
"photorespiration" evidence=IMP;TAS] [GO:0016041 "glutamate
synthase (ferredoxin) activity" evidence=ISS;IDA] [GO:0080114
"positive regulation of glycine hydroxymethyltransferase activity"
evidence=IDA] [GO:0006833 "water transport" evidence=RCA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009637 "response
to blue light" evidence=RCA] [GO:0009644 "response to high light
intensity" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0009658 "chloroplast organization" evidence=RCA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
[GO:0009814 "defense response, incompatible interaction"
evidence=RCA] [GO:0009902 "chloroplast relocation" evidence=RCA]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0010114 "response to red light" evidence=RCA] [GO:0010155
"regulation of proton transport" evidence=RCA] [GO:0010218
"response to far red light" evidence=RCA] [GO:0016117 "carotenoid
biosynthetic process" evidence=RCA] [GO:0019684 "photosynthesis,
light reaction" evidence=RCA] [GO:0042742 "defense response to
bacterium" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR000583 InterPro:IPR002489
InterPro:IPR002932 InterPro:IPR006982 InterPro:IPR013785
Pfam:PF00310 Pfam:PF01493 Pfam:PF01645 Pfam:PF04898
UniPathway:UPA00045 UniPathway:UPA00634 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0016020
Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0048046 GO:GO:0009941
GO:GO:0009416 GO:GO:0051538 GO:GO:0009853 GO:GO:0006541
InterPro:IPR017932 PROSITE:PS51278 EMBL:AL391716 Gene3D:2.160.20.60
SUPFAM:SSF69336 GO:GO:0097054 EMBL:Y09667 EMBL:U39287
IPI:IPI00539225 IPI:IPI00540577 RefSeq:NP_568134.1
RefSeq:NP_850763.1 UniGene:At.21961 UniGene:At.67926
ProteinModelPortal:Q9ZNZ7 IntAct:Q9ZNZ7 STRING:Q9ZNZ7 PaxDb:Q9ZNZ7
PRIDE:Q9ZNZ7 ProMEX:Q9ZNZ7 EnsemblPlants:AT5G04140.2 GeneID:830292
KEGG:ath:AT5G04140 TAIR:At5g04140 eggNOG:COG0069
HOGENOM:HOG000031558 InParanoid:Q9ZNZ7 KO:K00284 OMA:RMSASIV
PhylomeDB:Q9ZNZ7 ProtClustDB:CLSN2913236 ArrayExpress:Q9ZNZ7
Genevestigator:Q9ZNZ7 GermOnline:AT5G04140 GO:GO:0016041
GO:GO:0080114 Uniprot:Q9ZNZ7
Length = 1648
Score = 111 (44.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 1 MRQVFLT-GKQDE-EEFKRQIYVLRKVSTHKIPKP--GQRFYICSLSNRIVVYKGQFTAD 56
++QVF+ K+D ++ +R++Y+ RK+ + G Y CSLSN+ +VYKG ++
Sbjct: 259 IQQVFVKIAKEDSTDDIERELYICRKLIERAVATESWGTELYFCSLSNQTIVYKGMLRSE 318
Query: 57 QLWKYFTDL 65
L ++ DL
Sbjct: 319 ALGLFYLDL 327
>UNIPROTKB|Q0C616 [details] [associations]
symbol:gltB "Glutamate synthase, large subunit"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0004355
"glutamate synthase (NADPH) activity" evidence=ISS] [GO:0006537
"glutamate biosynthetic process" evidence=ISS] [GO:0009342
"glutamate synthase complex (NADPH)" evidence=ISS]
InterPro:IPR000583 InterPro:IPR002489 InterPro:IPR002932
InterPro:IPR006982 InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493
Pfam:PF01645 Pfam:PF04898 Gene3D:3.20.20.70 GO:GO:0006537
GO:GO:0004355 InterPro:IPR017932 PROSITE:PS51278 EMBL:CP000158
GenomeReviews:CP000158_GR Gene3D:2.160.20.60 SUPFAM:SSF69336
OMA:PPAWQSN eggNOG:COG0069 HOGENOM:HOG000031558 KO:K00265
RefSeq:YP_758827.1 ProteinModelPortal:Q0C616 STRING:Q0C616
GeneID:4287229 KEGG:hne:HNE_0093 PATRIC:32212970
ProtClustDB:CLSK891594 BioCyc:HNEP228405:GI69-140-MONOMER
GO:GO:0009342 Uniprot:Q0C616
Length = 1513
Score = 104 (41.7 bits), Expect = 0.00029, P = 0.00029
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 13 EEFKRQIYVLRKVSTHKIPKPG-QRFYICSLSNRIVVYKGQFTADQLWKYFTDL 65
EE +R +Y+ R+ + + Q FYICSLS++ ++YKG F A + ++ DL
Sbjct: 171 EELERALYICRRRIERRAREAAIQSFYICSLSHKSLIYKGMFLAQDIDNFYLDL 224
>TIGR_CMR|SPO_3768 [details] [associations]
symbol:SPO_3768 "glutamate synthase, large subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004355 "glutamate
synthase (NADPH) activity" evidence=ISS] [GO:0006537 "glutamate
biosynthetic process" evidence=ISS] InterPro:IPR000583
InterPro:IPR002489 InterPro:IPR002932 InterPro:IPR006982
InterPro:IPR013785 Pfam:PF00310 Pfam:PF01493 Pfam:PF01645
Pfam:PF04898 Gene3D:3.20.20.70 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006537 GO:GO:0004355
InterPro:IPR017932 PROSITE:PS51278 Gene3D:2.160.20.60
SUPFAM:SSF69336 OMA:PPAWQSN HOGENOM:HOG000031558 MEROPS:C44.003
KO:K00265 ProtClustDB:CLSK891594 RefSeq:YP_168963.1
ProteinModelPortal:Q5LLZ6 GeneID:3196499 KEGG:sil:SPO3768
PATRIC:23381033 Uniprot:Q5LLZ6
Length = 1510
Score = 101 (40.6 bits), Expect = 0.00060, P = 0.00060
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 1 MRQVFLTGKQ--DEEEFKRQIYVLRKVSTHKIPKPG-QRFYICSLSNRIVVYKGQFTADQ 57
+ Q+ ++ + DEE F+R++YV+R+ G Y+ SLS R ++YKG A+Q
Sbjct: 162 IEQILISNSKGVDEETFERELYVIRRRIEKAAQAAGIAGLYLASLSCRSIIYKGMMLAEQ 221
Query: 58 LWKYFTDL 65
+ ++ DL
Sbjct: 222 VAVFYPDL 229
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.139 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 66 66 0.00091 102 3 11 22 0.38 28
29 0.48 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 519 (55 KB)
Total size of DFA: 96 KB (2069 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.25u 0.09s 8.34t Elapsed: 00:00:02
Total cpu time: 8.26u 0.09s 8.35t Elapsed: 00:00:02
Start: Thu Aug 15 11:07:29 2013 End: Thu Aug 15 11:07:31 2013