BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12798
(170 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0JKD0|GLT1_ORYSJ Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp.
japonica GN=Os01g0681900 PE=2 SV=1
Length = 2167
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 97/162 (59%), Gaps = 36/162 (22%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERY--LSSGDENQRSAIKQVASGRFG 58
MS+GSIS+EAHT LA AMNK+G KSNTGEGGE P R L++G N +
Sbjct: 999 MSYGSISLEAHTALAMAMNKLGGKSNTGEGGEQPSRMEPLANGSMNPK------------ 1046
Query: 59 VTSSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGG 118
RSAIKQVASGRFGV+S YL +AD+LQIKMAQGAKPGEGG
Sbjct: 1047 ---------------------RSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGG 1085
Query: 119 ELPGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLI 159
ELPG+KV DIA TRHS G P D +++L LI
Sbjct: 1086 ELPGHKVIGDIAVTRHSTAGVGLISPPPHHDIYSIEDLAQLI 1127
>sp|Q03460|GLSN_MEDSA Glutamate synthase [NADH], amyloplastic OS=Medicago sativa PE=1 SV=1
Length = 2194
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 95/162 (58%), Gaps = 36/162 (22%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERY--LSSGDENQRSAIKQVASGRFG 58
MS+GSIS+EAHT LA AMN IG KSNTGEGGE P R L+ G N +
Sbjct: 1000 MSYGSISLEAHTALATAMNTIGGKSNTGEGGEQPSRMEPLADGSRNPK------------ 1047
Query: 59 VTSSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGG 118
RSAIKQVASGRFGV+S YL +AD+LQIKMAQGAKPGEGG
Sbjct: 1048 ---------------------RSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGG 1086
Query: 119 ELPGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLI 159
ELPG+KV DIA TR+S G P D +++L LI
Sbjct: 1087 ELPGHKVIGDIAITRNSTAGVGLISPPPHHDIYSIEDLAQLI 1128
>sp|Q9C102|GLT1_SCHPO Putative glutamate synthase [NADPH] OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=glt1 PE=2 SV=1
Length = 2111
Score = 140 bits (352), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 99/160 (61%), Gaps = 34/160 (21%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS+GSIS+E+H++LA AMN++G KSNTGEGGE+P R
Sbjct: 948 MSYGSISMESHSSLAIAMNRLGGKSNTGEGGEDPAR------------------------ 983
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
S LA+ D + RSAIKQ+ASGRFGVTS YL+ AD+LQIKMAQGAKPGEGGEL
Sbjct: 984 SQRLANGDTM---------RSAIKQIASGRFGVTSWYLSDADELQIKMAQGAKPGEGGEL 1034
Query: 121 PGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLI 159
PG KV++ IA TRHS G P D +++L LI
Sbjct: 1035 PGNKVSESIAKTRHSTAGVGLISPPPHHDIYSIEDLKQLI 1074
>sp|Q12680|GLT1_YEAST Glutamate synthase [NADH] OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GLT1 PE=1 SV=2
Length = 2145
Score = 139 bits (351), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 99/160 (61%), Gaps = 34/160 (21%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS+GSIS+EAH+TLA AMN++GAKSN GEGGE+ ER SA+++
Sbjct: 941 MSYGSISMEAHSTLAIAMNRLGAKSNCGEGGEDAER----------SAVQENG------- 983
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
+ RSAIKQVAS RFGVTS YL+ AD++QIK+AQGAKPGEGGEL
Sbjct: 984 ----------------DTMRSAIKQVASARFGVTSYYLSDADEIQIKIAQGAKPGEGGEL 1027
Query: 121 PGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLI 159
P +KV+KDIA TRHS P P D +++L LI
Sbjct: 1028 PAHKVSKDIAKTRHSTPNVGLISPPPHHDIYSIEDLKQLI 1067
>sp|Q9LV03|GLUT1_ARATH Glutamate synthase 1 [NADH], chloroplastic OS=Arabidopsis thaliana
GN=GLT1 PE=1 SV=2
Length = 2208
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 97/163 (59%), Gaps = 38/163 (23%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERY--LSSGDEN-QRSAIKQVASGRF 57
MS+GSIS+EAHTTLA AMNK+G KSNTGEGGE P R L+ G N +RS+IKQ+ASGRF
Sbjct: 1018 MSYGSISLEAHTTLAMAMNKLGGKSNTGEGGELPSRMEPLADGSRNPKRSSIKQIASGRF 1077
Query: 58 GVTSSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEG 117
GV+S YL +AD+LQ IKMAQGAKPGEG
Sbjct: 1078 GVSSYYLTNADELQ----------------------------------IKMAQGAKPGEG 1103
Query: 118 GELPGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLI 159
GELPG+KV DIA TR+S G P D +++L LI
Sbjct: 1104 GELPGHKVIGDIAITRNSTAGVGLISPPPHHDIYSIEDLAQLI 1146
>sp|P55037|GLTB_SYNY3 Ferredoxin-dependent glutamate synthase 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=gltB PE=1 SV=1
Length = 1550
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 94/162 (58%), Gaps = 37/162 (22%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGD--ENQRSAIKQVASGRFG 58
MS+GSIS EAH +LA AMN+IG KSNTGEGGE+PER+ + D +++ SAIKQVASGRFG
Sbjct: 905 MSYGSISKEAHESLAIAMNRIGGKSNTGEGGEDPERFTWTNDQGDSKNSAIKQVASGRFG 964
Query: 59 VTSSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGG 118
VTS YL+ A ++Q IKMAQGAKPGEGG
Sbjct: 965 VTSLYLSQAKEIQ----------------------------------IKMAQGAKPGEGG 990
Query: 119 ELPGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLI 159
+LPG KV IA RHS PG P D +++L LI
Sbjct: 991 QLPGKKVYPWIAKVRHSTPGVGLISPPPHHDIYSIEDLAELI 1032
>sp|P96218|GLTB_MYCTU Glutamate synthase [NADPH] large chain OS=Mycobacterium tuberculosis
GN=gltB PE=1 SV=3
Length = 1527
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 91/160 (56%), Gaps = 34/160 (21%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS+GSIS EAH TLA AMN++GA+SN GEGGE+ +R+ + + R
Sbjct: 892 MSYGSISAEAHETLAIAMNRLGARSNCGEGGEDVKRFDRDPNGDWR-------------- 937
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
RSAIKQVAS RFGVTS YL + DLQIKMAQGAKPGEGG+L
Sbjct: 938 -------------------RSAIKQVASARFGVTSHYLTNCTDLQIKMAQGAKPGEGGQL 978
Query: 121 PGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLI 159
PG+KV +A RHS PG P D +++L LI
Sbjct: 979 PGHKVYPWVAEVRHSTPGVGLISPPPHHDIYSIEDLAQLI 1018
>sp|Q05755|GLTB_AZOBR Glutamate synthase [NADPH] large chain OS=Azospirillum brasilense
GN=gltB PE=1 SV=1
Length = 1515
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 96/166 (57%), Gaps = 34/166 (20%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS G++S EAH TL AMN+IGAKS++GEGGE+P R+ D+N
Sbjct: 894 MSMGALSPEAHGTLNVAMNRIGAKSDSGEGGEDPARFRP--DKN---------------- 935
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
+N SAIKQVASGRFGVT+ YL +L+IK+AQGAKPGEGG+L
Sbjct: 936 ---------------GDNWNSAIKQVASGRFGVTAEYLNQCRELEIKVAQGAKPGEGGQL 980
Query: 121 PGYKVTKDIASTRHSVPGAFQCY-PKFQDYTVVKELFSLILAVSRI 165
PG+KVT+ IA RHS PG P D +++L LI + +I
Sbjct: 981 PGFKVTEMIARLRHSTPGVMLISPPPHHDIYSIEDLAQLIYDLKQI 1026
>sp|P55038|GLTS_SYNY3 Ferredoxin-dependent glutamate synthase 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=gltS PE=1 SV=2
Length = 1556
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 97/166 (58%), Gaps = 16/166 (9%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS G++S EAH TLA AMN++GAKSN+GEGGE+ RYL+ D +
Sbjct: 911 MSLGALSREAHETLAIAMNRLGAKSNSGEGGEDVVRYLTLDDVDSEG------------N 958
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
S L H LQ + SAIKQ+ASGRFGVT YL L+IKMAQGAKPGEGG+L
Sbjct: 959 SPTLPHLHGLQ---NGDTANSAIKQIASGRFGVTPEYLMSGKQLEIKMAQGAKPGEGGQL 1015
Query: 121 PGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLILAVSRI 165
PG KV++ IA R S PG P D +++L LI + +I
Sbjct: 1016 PGKKVSEYIAMLRRSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQI 1061
>sp|Q1XDB2|GLTB_PORYE Ferredoxin-dependent glutamate synthase OS=Porphyra yezoensis GN=gltB
PE=3 SV=1
Length = 1538
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 99/166 (59%), Gaps = 16/166 (9%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS G++S E H TLA AMN+IG KSN+GEGGE+P R+ D N +SG T
Sbjct: 900 MSLGALSRETHETLAIAMNRIGGKSNSGEGGEDPVRFKILNDVN--------SSG----T 947
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
S L H L+ + SAIKQ+ASGRFGVT YL +A L+IK+AQGAKPGEGG+L
Sbjct: 948 SPLLPHLKGLK---NGDTASSAIKQIASGRFGVTPEYLMNAKQLEIKIAQGAKPGEGGQL 1004
Query: 121 PGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLILAVSRI 165
PG K++ IA+ R PG P D +++L LI + +I
Sbjct: 1005 PGKKISPYIATLRKCKPGVPLISPPPHHDIYSIEDLSQLIFDLHQI 1050
>sp|Q9T0P4|GLTB2_ARATH Ferredoxin-dependent glutamate synthase 2, chloroplastic
OS=Arabidopsis thaliana GN=GLU2 PE=1 SV=2
Length = 1629
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 100/166 (60%), Gaps = 17/166 (10%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS G+IS E H T+A AMN++G KSN+GEGGE+P R+ + V G
Sbjct: 978 MSLGAISRETHETIAIAMNRLGGKSNSGEGGEDPIRW---------KPLTDVVDG----Y 1024
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
SS L H L+ + SAIKQVASGRFGVT ++L +AD L+IK+AQGAKPGEGG+L
Sbjct: 1025 SSTLPHLKGLR---NGDTATSAIKQVASGRFGVTPTFLVNADQLEIKVAQGAKPGEGGQL 1081
Query: 121 PGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLILAVSRI 165
PG KV+ IA R+S PG P D +++L LI + ++
Sbjct: 1082 PGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQV 1127
>sp|P51375|GLTB_PORPU Ferredoxin-dependent glutamate synthase OS=Porphyra purpurea GN=gltB
PE=3 SV=1
Length = 1538
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 98/166 (59%), Gaps = 16/166 (9%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS G++S E H TLA AMN+IG KSN+GEGGE+P R+ D N+ SG
Sbjct: 900 MSLGALSRETHETLAIAMNRIGGKSNSGEGGEDPVRFKVLNDVNE--------SG----N 947
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
S L H L+ + SAIKQ+ASGRFGVT YL +A L+IK+AQGAKPGEGG+L
Sbjct: 948 SDLLPHLKGLR---NGDTASSAIKQIASGRFGVTPEYLMNAKQLEIKIAQGAKPGEGGQL 1004
Query: 121 PGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLILAVSRI 165
PG K++ IA+ R PG P D +++L LI + +I
Sbjct: 1005 PGKKISPYIATLRKCKPGVPLISPPPHHDIYSIEDLSQLIFDLHQI 1050
>sp|P23225|GLTB_MAIZE Ferredoxin-dependent glutamate synthase, chloroplastic OS=Zea mays
GN=GLSF PE=1 SV=1
Length = 1616
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 99/166 (59%), Gaps = 17/166 (10%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS G+IS E H +A AMN+IG KSN+GEGGE+P R+ + + V G
Sbjct: 968 MSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRW---------NPLTDVVDG----Y 1014
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
S L H LQ + SAIKQVASGRFGVT ++L +AD ++IK+AQGAKPGEGG+L
Sbjct: 1015 SPTLPHLKGLQ---NGDTATSAIKQVASGRFGVTPTFLVNADQIEIKIAQGAKPGEGGQL 1071
Query: 121 PGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLILAVSRI 165
PG KV+ IA R+S PG P D +++L LI + +I
Sbjct: 1072 PGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQI 1117
>sp|Q43155|GLTB_SPIOL Ferredoxin-dependent glutamate synthase, chloroplastic OS=Spinacia
oleracea PE=1 SV=3
Length = 1517
Score = 126 bits (317), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 99/166 (59%), Gaps = 17/166 (10%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS G+IS E H +A AMN++G KSN+GEGGE+P R+ + V G
Sbjct: 871 MSLGAISRETHEAIAIAMNRLGGKSNSGEGGEDPIRW---------RPLTDVVDG----Y 917
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
SS L H LQ + SAIKQVASGRFGVT ++L +AD ++IK+AQGAKPGEGG+L
Sbjct: 918 SSTLPHLKGLQ---NGDTATSAIKQVASGRFGVTPTFLVNADQIEIKIAQGAKPGEGGQL 974
Query: 121 PGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLILAVSRI 165
PG KV+ IA R+S PG P D +++L LI + +I
Sbjct: 975 PGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQI 1020
>sp|Q0DG35|GLT2_ORYSJ Glutamate synthase 2 [NADH], chloroplastic OS=Oryza sativa subsp.
japonica GN=Os05g0555600 PE=2 SV=2
Length = 2188
Score = 126 bits (316), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 94/163 (57%), Gaps = 38/163 (23%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERY--LSSGDENQR-SAIKQVASGRF 57
MS+GSIS+EAHT+LA+AMN +G KSNTGEGGE P R L G +N R SAIKQVASGRF
Sbjct: 1005 MSYGSISLEAHTSLAEAMNTLGGKSNTGEGGEQPCRMVPLPDGSKNPRISAIKQVASGRF 1064
Query: 58 GVTSSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEG 117
GV+ YL +A ++Q IKMAQGAKPGEG
Sbjct: 1065 GVSIYYLTNAVEVQ----------------------------------IKMAQGAKPGEG 1090
Query: 118 GELPGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLI 159
GELPG+KV DIA TR+S G P D +++L LI
Sbjct: 1091 GELPGHKVIGDIAVTRNSTAGVGLISPPPHHDIYSIEDLAQLI 1133
>sp|Q9ZNZ7|GLTB1_ARATH Ferredoxin-dependent glutamate synthase 1, chloroplastic
OS=Arabidopsis thaliana GN=GLU1 PE=1 SV=2
Length = 1648
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 97/166 (58%), Gaps = 17/166 (10%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS G+IS E H +A AMN+IG KSN+GEGGE+P R+ + V G
Sbjct: 1002 MSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRW---------KPLTDVVDGY---- 1048
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
S L H LQ + SAIKQVASGRFGVT ++L +AD L+IK+AQGAKPGEGG+L
Sbjct: 1049 SPTLPHLKGLQ---NGDIATSAIKQVASGRFGVTPTFLVNADQLEIKVAQGAKPGEGGQL 1105
Query: 121 PGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLILAVSRI 165
PG KV+ IA R S PG P D +++L LI + +I
Sbjct: 1106 PGKKVSAYIARLRSSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQI 1151
>sp|P39812|GLTA_BACSU Glutamate synthase [NADPH] large chain OS=Bacillus subtilis (strain
168) GN=gltA PE=2 SV=3
Length = 1520
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 93/163 (57%), Gaps = 40/163 (24%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDEN---QRSAIKQVASGRF 57
MSFGS+S EAH LA AMN++G KSN+GEGGE+P+R++ DEN +RSAIKQ+ASGRF
Sbjct: 869 MSFGSLSKEAHEALAIAMNRLGGKSNSGEGGEDPKRFVP--DENGDDRRSAIKQIASGRF 926
Query: 58 GVTSSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEG 117
GV S YL +AD+LQ IKMAQGAKPGEG
Sbjct: 927 GVKSHYLVNADELQ----------------------------------IKMAQGAKPGEG 952
Query: 118 GELPGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLI 159
G+LPG KV +A R S PG P D +++L LI
Sbjct: 953 GQLPGNKVYPWVADVRGSTPGVGLISPPPHHDIYSIEDLAQLI 995
>sp|Q69RJ0|GLTB_ORYSJ Ferredoxin-dependent glutamate synthase, chloroplastic OS=Oryza
sativa subsp. japonica GN=GLU PE=2 SV=2
Length = 1615
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 99/166 (59%), Gaps = 17/166 (10%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS G+IS E H +A AMN+IG KSN+GEGGE+P R+ S + V G
Sbjct: 967 MSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRW---------SPLADVEDG----Y 1013
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
S L H LQ + SAIKQVASGRFGVT ++L +A+ ++IK+AQGAKPGEGG+L
Sbjct: 1014 SPTLPHLKGLQ---NGDTATSAIKQVASGRFGVTPTFLVNAEQIEIKIAQGAKPGEGGQL 1070
Query: 121 PGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLILAVSRI 165
PG KV+ IA R+S PG P D +++L LI + +I
Sbjct: 1071 PGKKVSAYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIYDLHQI 1116
>sp|Q06434|GLTB_ANTSP Ferredoxin-dependent glutamate synthase OS=Antithamnion sp. GN=gltB
PE=3 SV=1
Length = 1536
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 100/166 (60%), Gaps = 16/166 (9%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS G++S E H TLA MN+IG KSN+GEGGE+ R+ S D + GV+
Sbjct: 896 MSLGALSRETHETLAIRMNRIGGKSNSGEGGEDSTRFKSIQDLDTS-----------GVS 944
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
++ +H L+I ++ SAIKQ+ASGRFGVT YL +A L+IK+AQGAKPGEGG+L
Sbjct: 945 RTF-SHLKGLKI---NDLASSAIKQIASGRFGVTPEYLVNAKQLEIKIAQGAKPGEGGQL 1000
Query: 121 PGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLILAVSRI 165
PG KV+ IA R+ PG P D +++L LI + +I
Sbjct: 1001 PGKKVSPYIAELRNCKPGVTLISPPPHHDIYSIEDLAQLIFDLHQI 1046
>sp|O19906|GLTB_CYACA Ferredoxin-dependent glutamate synthase OS=Cyanidium caldarium
GN=gltB PE=3 SV=1
Length = 1549
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 97/168 (57%), Gaps = 20/168 (11%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERY--LSSGDENQRSAIKQVASGRFG 58
MS G++S EAH TL+ AMN+IG KSN+GEGGE+ R+ L+ DE S G
Sbjct: 907 MSLGALSREAHETLSIAMNRIGGKSNSGEGGEDSLRFTVLTDVDETGNSPSFPHLKG--- 963
Query: 59 VTSSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGG 118
L + D L SAIKQ+ASGRFGVT YL +A L+IK++QGAKPGEGG
Sbjct: 964 -----LKNGDSLS---------SAIKQIASGRFGVTPEYLVNAKQLEIKISQGAKPGEGG 1009
Query: 119 ELPGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLILAVSRI 165
+LPG KV+ IA+ R PG P D +++L LI + ++
Sbjct: 1010 QLPGKKVSPYIATLRACKPGVTLISPPPHHDIYSIEDLAQLIFDLHQV 1057
>sp|P09831|GLTB_ECOLI Glutamate synthase [NADPH] large chain OS=Escherichia coli (strain
K12) GN=gltB PE=1 SV=3
Length = 1486
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/166 (43%), Positives = 92/166 (55%), Gaps = 39/166 (23%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS G++S EAH LA+AMN IG SN+GEGGE+P RY +
Sbjct: 863 MSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGT--------------------- 901
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
N+ S IKQVASGRFGVT +YL +AD +QIK+AQGAKPGEGG+L
Sbjct: 902 -----------------NKVSRIKQVASGRFGVTPAYLVNADVIQIKVAQGAKPGEGGQL 944
Query: 121 PGYKVTKDIASTRHSVPGA-FQCYPKFQDYTVVKELFSLILAVSRI 165
PG KVT IA R+SVPG P D +++L LI + ++
Sbjct: 945 PGDKVTPYIAKLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDLKQV 990
>sp|Q3Z7F6|AGLUS_DEHE1 Archaeal-type glutamate synthase [NADPH] OS=Dehalococcoides
ethenogenes (strain 195) GN=gltB PE=3 SV=1
Length = 500
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 77/163 (47%), Gaps = 40/163 (24%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS+G+IS+ H +LA+A +G NTGEGG +
Sbjct: 173 MSYGAISLNVHRSLAQAAKNMGTMWNTGEGG---------------------------LH 205
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
SS + D+ I QVASGR+GV + YL ++IK+ QGAKPG GG L
Sbjct: 206 SSLMEFKDN------------TIVQVASGRYGVQNDYLNSGRIVEIKIGQGAKPGIGGHL 253
Query: 121 PGYKVTKDIASTRHSVPGAFQCYPKFQ-DYTVVKELFSLILAV 162
PG KV+ D++ TR G P Q D +++L LI A+
Sbjct: 254 PGEKVSADVSLTRMIPMGTDAISPAPQHDIYSIEDLSQLIYAL 296
>sp|B9KBQ2|AGLUS_THENN Archaeal-type glutamate synthase [NADPH] OS=Thermotoga neapolitana
(strain ATCC 49049 / DSM 4359 / NS-E) GN=gltB PE=3 SV=1
Length = 507
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 75/163 (46%), Gaps = 40/163 (24%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS+GSIS+ A +LA+A IG NTGEGG E
Sbjct: 178 MSYGSISLNALLSLARAARTIGTFFNTGEGGLPKE------------------------- 212
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
E + + I QVASGRFGV++ YL ++IK+ QGAKPG GG L
Sbjct: 213 --------------LREFKDNMIVQVASGRFGVSADYLNAGSAVEIKIGQGAKPGIGGHL 258
Query: 121 PGYKVTKDIASTRHSVPGAFQCYP-KFQDYTVVKELFSLILAV 162
PG KVT+ I+ TR G P D +++L LI A+
Sbjct: 259 PGEKVTEPISETRMIPVGTDALSPAPHHDIYSIEDLRQLIYAI 301
>sp|Q58746|AGLUS_METJA Archaeal glutamate synthase [NADPH] OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1351 PE=3 SV=1
Length = 510
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 39/133 (29%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS+G++S+ AH + AKA+ + G TGEGG +
Sbjct: 183 MSYGALSLNAHLSFAKAVKECGTFMGTGEGG---------------------------LP 215
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
+ +AD + I QVASGRFGV YL ++IK+ QGAKPG GG L
Sbjct: 216 KALYPYADHI------------ITQVASGRFGVNEEYLMKGSAIEIKIGQGAKPGIGGHL 263
Query: 121 PGYKVTKDIASTR 133
PG KVT +I++TR
Sbjct: 264 PGEKVTAEISATR 276
>sp|B1L993|AGLUS_THESQ Archaeal-type glutamate synthase [NADPH] OS=Thermotoga sp. (strain
RQ2) GN=gltB PE=3 SV=1
Length = 507
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 75/163 (46%), Gaps = 40/163 (24%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS+GSIS+ A +LA+A +G NTGEGG E
Sbjct: 178 MSYGSISLNAILSLARAARTVGTFFNTGEGGLPKE------------------------- 212
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
E + + I QVASGRFGV++ YL ++IK+ QGAKPG GG L
Sbjct: 213 --------------LREFKDNMIVQVASGRFGVSADYLNAGSAVEIKIGQGAKPGIGGHL 258
Query: 121 PGYKVTKDIASTRHSVPGAFQCYP-KFQDYTVVKELFSLILAV 162
PG KVT+ I+ TR G P D +++L LI A+
Sbjct: 259 PGEKVTEPISETRMIPVGTDALSPAPHHDIYSIEDLRQLIYAI 301
>sp|Q9WYM8|AGLUS_THEMA Archaeal-type glutamate synthase [NADPH] OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=gltB PE=3 SV=1
Length = 507
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 75/163 (46%), Gaps = 40/163 (24%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS+GSIS+ A +LA+A +G NTGEGG E
Sbjct: 178 MSYGSISLNAILSLARAARTVGTFFNTGEGGLPKE------------------------- 212
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
E + + I QVASGRFGV++ YL ++IK+ QGAKPG GG L
Sbjct: 213 --------------LREFKDNMIVQVASGRFGVSADYLNAGSAVEIKIGQGAKPGIGGHL 258
Query: 121 PGYKVTKDIASTRHSVPGAFQCYP-KFQDYTVVKELFSLILAV 162
PG KVT+ I+ TR G P D +++L LI A+
Sbjct: 259 PGEKVTEPISETRMIPVGTDALSPAPHHDIYSIEDLRQLIYAI 301
>sp|O29309|AGLUS_ARCFU Archaeal glutamate synthase [NADPH] OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=gltB PE=3 SV=1
Length = 511
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 58/163 (35%), Positives = 76/163 (46%), Gaps = 40/163 (24%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKSNTGEGGENPERYLSSGDENQRSAIKQVASGRFGVT 60
MS+G+IS +A +LA A ++ G NTGEGG E ++G
Sbjct: 184 MSYGAISYQAFKSLAMAASEFGTLFNTGEGGLPKELR------------------KYG-- 223
Query: 61 SSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGEL 120
++AI Q ASGRFGV YL A ++IK+ QGAKPG GG L
Sbjct: 224 -------------------KNAIVQCASGRFGVDPEYLNVAAVVEIKIGQGAKPGIGGHL 264
Query: 121 PGYKVTKDIASTRHSVPGAFQCYPKFQ-DYTVVKELFSLILAV 162
PG KVT I+ TR G P Q D +++L LI A+
Sbjct: 265 PGEKVTLPISVTRMIPEGTDALSPAPQHDIYSIEDLSMLIYAL 307
>sp|O34849|YERD_BACSU Glutamate synthase large subunit-like protein YerD OS=Bacillus
subtilis (strain 168) GN=yerD PE=3 SV=1
Length = 525
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 29/161 (18%)
Query: 1 MSFGSISIEAHTTLAKAMNKIGAKS-NTGEGGENPERYLSSGDENQRSAIKQVASGRFGV 59
MS+GS+ A T L+K ++ G NTGEGG + E +L G + I Q+ G FGV
Sbjct: 184 MSYGSLGERAVTALSKGLHLAGGTWMNTGEGGLS-EYHLKGGAD----IICQIGPGLFGV 238
Query: 60 TSSYLAHADDLQIKMADENQRSAIKQVASGRFGVTSSYLAHADDLQIKMAQGAKPGEGGE 119
+ + + ++S I Q+ + ++K+AQGAK GG
Sbjct: 239 RKR------NGEFSWEEFKRKSRIDQIKA---------------FELKLAQGAKT-RGGH 276
Query: 120 LPGYKVTKDIASTRHSVPGAFQCYP-KFQDYTVVKELFSLI 159
+ G KV++++A R+ PG P +F +++ E+ I
Sbjct: 277 VDGAKVSEEVADIRNVEPGKSIDSPNRFYEFSNPPEMLDFI 317
>sp|Q65946|DPOL_ADECC DNA polymerase OS=Canine adenovirus serotype 1 (strain CLL) GN=POL
PE=3 SV=1
Length = 1149
Score = 30.0 bits (66), Expect = 7.8, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 35 ERYLSSGDENQRSAIKQVASGRFGVTSSYLAHADDLQIKMADENQRSAIKQVASGRFGVT 94
E+ S ++ RS K +++ +G S+ D+ + +D+ + + K++ASG + V
Sbjct: 769 EKADKSKNQTMRSIAKLLSNALYG---SFATKLDNKKTVFSDQIESNIAKEIASGAYVVK 825
Query: 95 SSYLAHADDL 104
SS D+L
Sbjct: 826 SSSYIETDNL 835
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,377,183
Number of Sequences: 539616
Number of extensions: 2376745
Number of successful extensions: 4547
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 4456
Number of HSP's gapped (non-prelim): 64
length of query: 170
length of database: 191,569,459
effective HSP length: 109
effective length of query: 61
effective length of database: 132,751,315
effective search space: 8097830215
effective search space used: 8097830215
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)