BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy128
(446 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5HZG4|TAF3_MOUSE Transcription initiation factor TFIID subunit 3 OS=Mus musculus
GN=Taf3 PE=1 SV=2
Length = 932
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 274 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 325
Q+WICP C DDGS PMIGCD CD WYHW CVG++A PE WFCPKC+
Sbjct: 865 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 916
Score = 32.7 bits (73), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 147 KEKEKGKKEEKEKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEK-KSKDKDKKLK 205
KEK+K ++ EKEK+ KE K MK++ P + KE +D + K + KD + +
Sbjct: 555 KEKDKMREREKEKEAGKELKYPWRELMKDEDSDPYKFKIKEFEDIDAAKVRLKDGIVRRE 614
Query: 206 KEKLKKKKKEKERSSHEKE 224
+EK K KKK++ERS EK+
Sbjct: 615 REKHKDKKKDRERSKREKD 633
>sp|Q5VWG9|TAF3_HUMAN Transcription initiation factor TFIID subunit 3 OS=Homo sapiens
GN=TAF3 PE=1 SV=1
Length = 929
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 274 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLV-AEPETSDWFCPKCSK 325
Q+WICP C DDGS PMIGCD CD WYHW CVG++ A PE WFCPKC+
Sbjct: 863 NQIWICPGCNKPDDGS-PMIGCDDCDDWYHWPCVGIMTAPPEEMQWFCPKCAN 914
>sp|Q5EAW9|TAF3_XENLA Transcription initiation factor TFIID subunit 3 OS=Xenopus laevis
GN=taf3 PE=2 SV=1
Length = 845
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 274 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGL-VAEPETSDWFCPKC 323
Q+WICP C DDGS PMIGCD CD WYHW CVG+ A PE WFC KC
Sbjct: 779 NQIWICPGCNKPDDGS-PMIGCDQCDDWYHWPCVGINAAPPEDEQWFCTKC 828
>sp|Q5F489|TAF3_CHICK Transcription initiation factor TFIID subunit 3 OS=Gallus gallus
GN=TAF3 PE=2 SV=1
Length = 930
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 274 KQVWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAE-PETSDWFCPKCSK 325
Q+W CP C DDGS PMIGCD CD WYHW CVG+ A PE WFC KC+
Sbjct: 864 NQIWFCPGCNKPDDGS-PMIGCDDCDDWYHWPCVGITAAPPEEMQWFCSKCAN 915
>sp|Q3ZCK8|COA5_BOVIN Cytochrome c oxidase assembly factor 5 OS=Bos taurus GN=COA5 PE=3
SV=1
Length = 74
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
Query: 365 SACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDTR 421
ACAG + DL LCLL++DCV + K+PRQCL+EG C+ALK +FFECKRS+LD R
Sbjct: 12 GACAGVKEDLGLCLLQSDCVLKEGKSPRQCLKEG---NCKALKYSFFECKRSMLDAR 65
>sp|Q28CA1|COA5_XENTR Cytochrome c oxidase assembly factor 5 OS=Xenopus tropicalis
GN=coa5 PE=3 SV=1
Length = 75
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 3/59 (5%)
Query: 363 DKSACAGSRADLKLCLLETDCVQVDRKTPRQCLREGLAPQCEALKNTFFECKRSLLDTR 421
DK CAG + DLK CLL+TDCV + K+P++CL+EG C+AL+ TFFECKRS+LDTR
Sbjct: 11 DKHPCAGVKEDLKSCLLQTDCVLQEGKSPKECLKEGY---CKALQVTFFECKRSILDTR 66
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 50.8 bits (120), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 91/148 (61%), Gaps = 9/148 (6%)
Query: 114 KKTHKKKEKEKIKKKKDK----KDKDKIKNKEKDKEKKEKEKGKKEEKEKKEEKEKKEEK 169
++ ++ +KE+ K++++ ++K + KE++ +++E+E+ +KEE K++E+E+ +++
Sbjct: 2741 RQEQERLQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKE 2800
Query: 170 EFKMKEDKEK----PVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEV 225
E ++++E+ E+++KEE+ +E++ K++ LK+++ ++ +KE+E E+E
Sbjct: 2801 EELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQER 2860
Query: 226 IPKLTFKFGTDMEE-KTKRESSPKIVIK 252
+ + + + K+K ES +IK
Sbjct: 2861 LERKKIELAEREQHIKSKLESDMVKIIK 2888
Score = 50.8 bits (120), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
Query: 105 KKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKEKEKGKKEEKEKKEEKE 164
++ + ++++K+ +KE+E ++++++ K++ K +++E+ +KE+ K +++++ E+E
Sbjct: 2756 QEQERLEREKQEQLQKEEELKRQEQERLQKEEAL-KRQEQERLQKEEELKRQEQERLERE 2814
Query: 165 KKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKK---EKLKKKKKE-KERSS 220
K+E+ + K +E K + E+++KEE +E++ K+++LK+ E+L++KK E ER
Sbjct: 2815 KQEQLQ-KEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLERKKIELAEREQ 2873
Query: 221 HEKEVIPKLTFKFGTDMEEKTKRE 244
H K + K D K K E
Sbjct: 2874 HIKSKLESDMVKIIKDELTKEKDE 2897
Score = 47.0 bits (110), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 74/111 (66%), Gaps = 9/111 (8%)
Query: 104 IKKDKSIKKDKKTHKKKEK-EKIKKKKDKKDKDKIK-NKEKDKEKKEKEKGKKEEKEKKE 161
++K++ +K+ ++ ++EK E+++K+++ K +++ + KE+ +++E+E+ +KEE+ K++
Sbjct: 2797 LQKEEELKRQEQERLEREKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQ 2856
Query: 162 EKEKKEEKEFKMKEDK-------EKPVEKIRKEEKDSEKEKKSKDKDKKLK 205
E+E+ E K+ ++ E + E + KI K+E EK++ K+KD KL+
Sbjct: 2857 EQERLERKKIELAEREQHIKSKLESDMVKIIKDELTKEKDEIIKNKDIKLR 2907
Score = 45.8 bits (107), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 86/141 (60%), Gaps = 16/141 (11%)
Query: 118 KKKEKEKIKKKKDKKDKDKIKNKEKDKEKKEKEKGKKEEKEKKEEKEKKEEKEFKMKED- 176
K++E+E+++K+++ K + E++ E+ K+E+ +K+EE +++E++ + +E
Sbjct: 2740 KRQEQERLQKEEELKRQ----------EQERLEREKQEQLQKEEELKRQEQERLQKEEAL 2789
Query: 177 KEKPVEKIRKEE--KDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEVIPKLTFKFG 234
K + E+++KEE K E+E+ ++K ++L+KE+ + K++E+ER E+ + K +
Sbjct: 2790 KRQEQERLQKEEELKRQEQERLEREKQEQLQKEE-ELKRQEQERLQKEEAL--KRQEQER 2846
Query: 235 TDMEEKTKRESSPKIVIKPVK 255
EE+ KR+ ++ K ++
Sbjct: 2847 LQKEEELKRQEQERLERKKIE 2867
Score = 32.0 bits (71), Expect = 9.4, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 85/134 (63%), Gaps = 15/134 (11%)
Query: 120 KEKEKIKKKKDKKDKDKIKNKEKDKEKKEKEKGKKEEKEKKEEKEKKEEKEFKMKEDKEK 179
+EKE+++++K ++ K + + ++K++E++E+++ ++ K +++E+ +KEE E K +
Sbjct: 2703 QEKERLEREKQEQLKKEEELRKKEQERQEQQQKEEALKRQEQERLQKEE------ELKRQ 2756
Query: 180 PVEKIRKEEKDSEKEKKSKDKD-KKLKKEKLKK----KKKEKERSSHEKEVIPKLTFKFG 234
E++ +E++ E+ K+++ K+ ++E+L+K K++E+ER E+E+ + +
Sbjct: 2757 EQERLEREKQ----EQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLE 2812
Query: 235 TDMEEKTKRESSPK 248
+ +E+ ++E K
Sbjct: 2813 REKQEQLQKEEELK 2826
>sp|F1QBY1|NIPLB_DANRE Nipped-B-like protein B OS=Danio rerio GN=nipblb PE=2 SV=1
Length = 2876
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 74/105 (70%), Gaps = 4/105 (3%)
Query: 118 KKKEKEKIKKKKDKKDKDKIKNKEKDKE-KKEKEKGKKEEKEKKEEKEKKEEKEFKMKED 176
+ KE+ K + KK KD +K + K++DKE +K++EK + +E EK EK++ +E E ++D
Sbjct: 746 RDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKD 805
Query: 177 KEKPVEKIRKEEKDSEKEK-KSKDKDKKLKK--EKLKKKKKEKER 218
++K +EK R++++D E EK + KD+DK+L+K EK + K +EK+R
Sbjct: 806 RDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDR 850
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 80/115 (69%), Gaps = 2/115 (1%)
Query: 106 KDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKE-KKEKEKGKKEEKEKKEEKE 164
+DK ++KD++ ++ KE EK ++K K+ +K + K++DKE +K +EK + +E EK EK+
Sbjct: 770 QDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAREKDQDKELEKGREKD 829
Query: 165 KKEEKEFKMKEDKEKPVEKIRKEEKDSEKEK-KSKDKDKKLKKEKLKKKKKEKER 218
+ +E E ++D++K EK R + +D +++K + KD+DK +K++ K ++K++E+
Sbjct: 830 QDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREKDREK 884
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 83/131 (63%), Gaps = 8/131 (6%)
Query: 96 TSSEDLGEIKKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEK---KEKEKG 152
TS E +DK +++K K EK + K+ + +DK+++K++EKD+EK KE EKG
Sbjct: 670 TSKSSRVEHNRDKEQEQEKVGDKGLEKGREKELEKGRDKERVKDQEKDQEKGRDKEVEKG 729
Query: 153 KKEE--KEKKEEKEKKEEKEFKMKEDK--EKPVEKIRKEEKDSEKEK-KSKDKDKKLKKE 207
+ +E K++ +E+EK +KE DK K +EK R++++D E EK + K++DK+L+K
Sbjct: 730 RYKERVKDRVKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKG 789
Query: 208 KLKKKKKEKER 218
+ K + KE E+
Sbjct: 790 REKDQDKELEK 800
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 77/127 (60%), Gaps = 22/127 (17%)
Query: 114 KKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEK---KEKEKGKKEEKEKKEEKEKKEEKE 170
K+ K ++KE++K + K+ KD K +EKD++K K++EK + +E EK EK++ +E E
Sbjct: 740 KEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELE 799
Query: 171 FKMKEDKEKPVEKIRKEEKDSEKEK-KSKDKDKKLKK------------------EKLKK 211
++D++K +EK R++++D E EK + KD+DK+L+K +K +
Sbjct: 800 KGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRD 859
Query: 212 KKKEKER 218
K +EK+R
Sbjct: 860 KVREKDR 866
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 70/105 (66%), Gaps = 10/105 (9%)
Query: 103 EIKKDKSIKKDKKTHKKKEKEKIK---KKKDK-KDKDKIKNKEKDKEK-KEKEKGKKEEK 157
E++K + +DK+ K +EK++ K K +DK +DKD+ K +EKD++K +EK++ K EK
Sbjct: 821 ELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDRDKLREK 880
Query: 158 EKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDK 202
++++ +E+ +K +K++ E+++ EKD EKE+ KD+DK
Sbjct: 881 DREKIRERDRDK----GREKDRDKEQVKTREKDQEKERL-KDRDK 920
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 78/131 (59%), Gaps = 18/131 (13%)
Query: 106 KDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKE-------------KKEKEKG 152
+DK ++K ++ + KE EK ++K K+ +K + K++DKE +K+++K
Sbjct: 794 QDKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKV 853
Query: 153 KKEEKEKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEK-----KSKDKDKKLKKE 207
+ ++++K EK++ + +E + +EK EKIR+ ++D +EK + K ++K +KE
Sbjct: 854 RDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQEKE 913
Query: 208 KLKKKKKEKER 218
+LK + KE+E+
Sbjct: 914 RLKDRDKEREK 924
Score = 35.4 bits (80), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 61/93 (65%), Gaps = 15/93 (16%)
Query: 106 KDKSIKKDKKTHKKKEKEKIKKK-KDK-----KDKDKIKNKEKDKEK-------KEKEKG 152
+DK +KD+ ++K++EKI+++ +DK +DK+++K +EKD+EK KE+EK
Sbjct: 866 RDKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQEKERLKDRDKEREKV 925
Query: 153 KKEEKEKKEEKEKKEEKEFKMKEDKEKPVEKIR 185
+ + +++ ++EKK KE + EDK+ P ++ R
Sbjct: 926 RDKGRDRDRDQEKKRNKE--LTEDKQAPEQRSR 956
>sp|Q8SX83|SPEN_DROME Protein split ends OS=Drosophila melanogaster GN=spen PE=1 SV=2
Length = 5560
Score = 43.5 bits (101), Expect = 0.003, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 113 DKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKEKEKGKKEEKEKKEEKEK-KEEKEF 171
DK+ +K+ +EK ++K+++++D + + +DK+ +EKE +KE++EK+ +EK + E+E
Sbjct: 1997 DKEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREKELHREKDQREREH 2056
Query: 172 KMKEDKEKPVEKIRKEEKDSEKEKKSKDKDK 202
+ KE + ++ ++ +E S K K
Sbjct: 2057 REKEQSRRAMDVEQEGRGGRMRELSSYQKSK 2087
Score = 36.2 bits (82), Expect = 0.56, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 55/91 (60%), Gaps = 11/91 (12%)
Query: 141 EKDKEKKEKEKGKKEEKEKKEEKEKKE-------EKEFKMKEDKEKPVEKIRKEEKDSEK 193
++ KEK+ +EK +E+++++ + +KE EKE + KE +EK ++ +E+ E+
Sbjct: 1998 KEQKEKEIREKDLREKEQRERDNREKELRDKDLREKEMREKEQREK---ELHREKDQRER 2054
Query: 194 EKKSKDKDKK-LKKEKLKKKKKEKERSSHEK 223
E + K++ ++ + E+ + + +E SS++K
Sbjct: 2055 EHREKEQSRRAMDVEQEGRGGRMRELSSYQK 2085
Score = 35.0 bits (79), Expect = 1.1, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 57/93 (61%), Gaps = 11/93 (11%)
Query: 119 KKEKEKIKKKKDKKDKDKIKNKEKDKEKKEKEKGKKEEKEKKEEKEKKEEKEFKMKEDKE 178
K++KEK ++KD ++K++ +E+D +KE EKE +E KE++E++ + K+ +E
Sbjct: 1998 KEQKEKEIREKDLREKEQ---RERDNREKELRDKDLREKEMRE-KEQREKELHREKDQRE 2053
Query: 179 KPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKK 211
+E ++ E+ +++ D +++ + ++++
Sbjct: 2054 -------REHREKEQSRRAMDVEQEGRGGRMRE 2079
Score = 34.3 bits (77), Expect = 1.8, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 105 KKDKSIKKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKEKE-----KGKKEEKEK 159
+K+K I+ +K +K+++E+ ++K+ +DKD + + ++KE++EKE ++ E +
Sbjct: 2000 QKEKEIR-EKDLREKEQRERDNREKELRDKDLREKEMREKEQREKELHREKDQREREHRE 2058
Query: 160 KEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKS 197
KE+ + + E + + + + + +K + D E S
Sbjct: 2059 KEQSRRAMDVEQEGRGGRMRELSSYQKSKMDIAGEASS 2096
>sp|Q3UXZ9|KDM5A_MOUSE Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2
Length = 1690
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 276 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPET--SDWFCPKCSKVDEGSRKE 333
+++C CG + + ++ CDGCD YH C+ L P+ DW CPKC V E K
Sbjct: 293 LYVCMFCG-RGNNEDKLLLCDGCDDSYHTFCL-LPPLPDVPKGDWRCPKC--VAEECNKP 348
Query: 334 KKKRGRKKKTHQDIIMS 350
++ G ++ + + S
Sbjct: 349 REAFGFEQAVREYTLQS 365
>sp|C0H5F4|RBP2B_PLAF7 Reticulocyte binding protein 2 homolog b OS=Plasmodium falciparum
(isolate 3D7) GN=Rh2b PE=3 SV=1
Length = 3179
Score = 37.7 bits (86), Expect = 0.16, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 49/64 (76%), Gaps = 7/64 (10%)
Query: 118 KKKEKEKIKKKKDKKDKDKIKNKEKDKEKKEK-EKGKKEEKEKKEEKEKKEEKEFKMKED 176
K++E+E+++K+++ +K +E+++ ++EK E+ +KEE+ +K+E+EK++++ + E+
Sbjct: 2664 KRQEQERLQKEEE------LKRQEQERLEREKQEQLQKEEELRKKEQEKQQQRNIQELEE 2717
Query: 177 KEKP 180
++KP
Sbjct: 2718 QKKP 2721
Score = 35.4 bits (80), Expect = 1.0, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 64/88 (72%), Gaps = 4/88 (4%)
Query: 142 KDKEKKEKEKGKKEEKEKKEEKEKKEEKEFKMKED-KEKPVEKIRKEE--KDSEKEKKSK 198
++KE+ E+EK ++ +KE +++E++ +++ + +E K + E+++KEE K E+E+ +
Sbjct: 2628 QEKERLEREKQEQLKKEALKKQEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLER 2687
Query: 199 DKDKKLKK-EKLKKKKKEKERSSHEKEV 225
+K ++L+K E+L+KK++EK++ + +E+
Sbjct: 2688 EKQEQLQKEEELRKKEQEKQQQRNIQEL 2715
Score = 35.0 bits (79), Expect = 1.1, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 71/99 (71%), Gaps = 7/99 (7%)
Query: 112 KDKKTHKKKEKEKIKKK---KDKKDKDKIKNKEKDKEKKEKEKGKKEEKEKKEEKEKKEE 168
++K+ +++++E++KK+ K ++++ + + KE+ +++E+E+ +KEE+ K++E+E+ E
Sbjct: 2628 QEKERLEREKQEQLKKEALKKQEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLER 2687
Query: 169 KEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKE 207
+ K+++ + E++RK+E++ ++++ ++ +++ K E
Sbjct: 2688 E----KQEQLQKEEELRKKEQEKQQQRNIQELEEQKKPE 2722
>sp|A2R7P5|NST1_ASPNC Stress response protein nst1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=nst1 PE=3 SV=1
Length = 1201
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
Query: 118 KKKEKEKIKKKKDKKDKDKIKNKEKDKEKKEKEKGKKEEKEKKEEKEKK--EEKEFKMKE 175
+K+E++K K++ ++K ++ E+ +++ EK+K +EE+E++ E E+K E+KE + K
Sbjct: 596 RKREEQKKKREAERKAQEA----ERLRKEAEKQKRLREERERQAEIERKQREQKELEKKR 651
Query: 176 DKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKEKLKKKKKEKERSSHEKEV 225
+E ++R+++ E+E+K ++ K E +K+ + +R SH V
Sbjct: 652 REEARQNELREKKTKDERERKLREAAPKTDYEGQEKRDPQAKRVSHTGPV 701
Score = 32.3 bits (72), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 63/101 (62%), Gaps = 13/101 (12%)
Query: 148 EKEKGKKEEKEKKEEKEKKEEKEFKMKEDKEKPVEKIRKEEKDSEKEKKSKDKDKKLKKE 207
E+++ K+EE++KK E E+K ++ +++++ EK +K +EE++ + E + K +++K
Sbjct: 592 EEQRRKREEQKKKREAERKAQEAERLRKEAEK--QKRLREERERQAEIERKQREQK---- 645
Query: 208 KLKKKKKEKERSSHEKEVIPKLTFKFGTDMEEKTKRESSPK 248
+L+KK++E+ R + +E K D E+ RE++PK
Sbjct: 646 ELEKKRREEARQNELRE-------KKTKDERERKLREAAPK 679
>sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3
Length = 1690
Score = 37.4 bits (85), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 276 VWICPACGVQDDGSLPMIGCDGCDAWYHWVCVGLVAEPET--SDWFCPKCSKVDEGSRKE 333
+++C CG + + ++ CDGCD YH C+ + P+ DW CPKC V E K
Sbjct: 293 LYVCMFCG-RGNNEDKLLLCDGCDDSYHTFCL-IPPLPDVPKGDWRCPKC--VAEECSKP 348
Query: 334 KKKRGRKKKTHQDIIMS 350
++ G ++ + + S
Sbjct: 349 REAFGFEQAVREYTLQS 365
>sp|Q2GZN9|NST1_CHAGB Stress response protein NST1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=NST1 PE=3 SV=1
Length = 1255
Score = 36.6 bits (83), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 42/57 (73%)
Query: 111 KKDKKTHKKKEKEKIKKKKDKKDKDKIKNKEKDKEKKEKEKGKKEEKEKKEEKEKKE 167
K +++ ++KE E+++K +D+++ ++ + +++EKK +E+ + EKE +E+KE+K+
Sbjct: 639 KAEEEERQRKEAERLRKIQDREEAERKAREAREREKKTREEARLREKEAREQKERKD 695
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.129 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,192,738
Number of Sequences: 539616
Number of extensions: 10302490
Number of successful extensions: 446987
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 5958
Number of HSP's successfully gapped in prelim test: 5862
Number of HSP's that attempted gapping in prelim test: 110481
Number of HSP's gapped (non-prelim): 110657
length of query: 446
length of database: 191,569,459
effective HSP length: 121
effective length of query: 325
effective length of database: 126,275,923
effective search space: 41039674975
effective search space used: 41039674975
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)