Your job contains 1 sequence.
>psy12802
LYAVKYTDVSSNVLQDDVFNLDIVRLRSEGNVAGIWAWRGQNGRKSYVVKGLAFSPDSTK
LAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLADGPIIYGQSDGKIKAAHV
KANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVTEDASNFDQQQGRVVQHPV
PPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVV
GSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVL
KRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTP
DTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNEILTCVSIK
LFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKG
KFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTLLTEFMNP
HLISVRLNERKQVHSQQENKKLAYLLDLHTICVIDLITNLPTLHINHDSKIDWLELNETA
HKLLYRDKKMRLTLLDIRTSEKHNILNYCTFVQWLPGSDVVVAQSRHNACVWYNIDTPDR
ITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYELDESLIEFGTAVHDSDFGKAILYLES
LGINKKEAEGMWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKIGEVWSKENNI
GDPLQCPELWARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAETNNYEY
NELKKKYIKWLTDTRQEDKAGELYEKEGDHQTALNYYLKANFTSKACNLVQNEPYLLENH
DVVSQIVKGLIKNESYIKAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTAL
EEEWGDHLIENKQYNAAINHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQHV
KTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATFI
QKCKQLEEENKFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYHPDLLDTTLLHL
AQECEESKNYKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIALSNGGQEAVEPVVYLWA
KSLGGDSAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDN
GQFNEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFENEN
FSKFETLLLRAHKVDLIIEKYKMNHMWNDALRVCGEYVPSKLPLLQQEYEKEINTNISKD
IHSLITQARQWEQNGEFYNAVECYLKIKNVDVNLMVKILNEVTQLTLKYLNHDQSYKILP
SLVPKLMEFKQYDLAVRVYLNIDMVKEAVDIFIYTQNWNKARKLCAELKPEYLSYVENQY
KEWLKKNGDADMLSEIDINTALDMLMKQGQWNQCLDKAKNINTNLLHKYMALYAMHLIKN
KEYAQLTQLFNEYGTPNIPQFYNIYKQTAYCILNDSNENVNLIISLRNMLFNVIKNQNNN
EEIDKQYLQTNSLLHSK
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12802
(1637 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040827-1 - symbol:ift172 "intraflagellar tr... 2661 0. 2
UNIPROTKB|E1BVT1 - symbol:IFT172 "Uncharacterized protein... 2580 0. 2
UNIPROTKB|E1BJT7 - symbol:LOC100848219 "Uncharacterized p... 2578 0. 2
MGI|MGI:2682064 - symbol:Ift172 "intraflagellar transport... 2578 0. 2
UNIPROTKB|E2RF25 - symbol:IFT172 "Uncharacterized protein... 2577 0. 2
UNIPROTKB|I3LPC6 - symbol:IFT172 "Uncharacterized protein... 2575 0. 2
UNIPROTKB|Q9UG01 - symbol:IFT172 "Intraflagellar transpor... 2567 0. 2
RGD|620744 - symbol:Ift172 "intraflagellar transport 172 ... 2558 0. 2
FB|FBgn0035317 - symbol:osm-1 "osm-1" species:7227 "Droso... 2338 0. 2
UNIPROTKB|Q5DM57 - symbol:IFT172 "Intraflagellar transpor... 1982 1.6e-292 2
WB|WBGene00003883 - symbol:osm-1 species:6239 "Caenorhabd... 1936 2.5e-274 2
UNIPROTKB|Q22830 - symbol:osm-1 "Intraflagellar transport... 1936 2.5e-274 2
MGI|MGI:1915509 - symbol:Ift80 "intraflagellar transport ... 130 1.4e-10 2
UNIPROTKB|F1PNI0 - symbol:IFT80 "Uncharacterized protein"... 127 3.0e-10 2
UNIPROTKB|E1BT30 - symbol:IFT80 "Uncharacterized protein"... 133 3.6e-10 2
UNIPROTKB|Q9P2H3 - symbol:IFT80 "Intraflagellar transport... 126 9.6e-10 2
RGD|1312006 - symbol:Ift80 "intraflagellar transport 80 h... 122 9.8e-10 2
UNIPROTKB|F1P3M3 - symbol:IFT122 "Uncharacterized protein... 175 1.2e-09 2
UNIPROTKB|A8WGF4 - symbol:ift122 "Intraflagellar transpor... 162 1.4e-09 3
UNIPROTKB|H3BRJ5 - symbol:H3BRJ5 "Uncharacterized protein... 126 1.6e-09 2
RGD|1564116 - symbol:Wdr35 "WD repeat domain 35" species:... 133 6.3e-09 2
UNIPROTKB|F1MG59 - symbol:Bt.37431 "Uncharacterized prote... 153 6.6e-09 2
ZFIN|ZDB-GENE-041212-50 - symbol:ift80 "intraflagellar tr... 123 1.0e-08 3
MGI|MGI:1932386 - symbol:Ift122 "intraflagellar transport... 151 1.5e-08 2
FB|FBgn0265102 - symbol:Oseg1 "Outer segment 1" species:7... 159 3.4e-08 3
MGI|MGI:1921932 - symbol:Wdr35 "WD repeat domain 35" spec... 118 2.4e-07 2
RGD|2318759 - symbol:Ift140 "intraflagellar transport 140... 139 6.8e-07 3
ZFIN|ZDB-GENE-060810-148 - symbol:wdr35 "WD repeat domain... 129 2.5e-06 2
FB|FBgn0032891 - symbol:Oseg5 "Oseg5" species:7227 "Droso... 105 3.0e-06 3
ZFIN|ZDB-GENE-040426-2449 - symbol:ift122 "intraflagellar... 140 4.0e-06 3
WB|WBGene00000484 - symbol:che-2 species:6239 "Caenorhabd... 102 4.2e-06 3
UNIPROTKB|Q9HBG6 - symbol:IFT122 "Intraflagellar transpor... 137 7.4e-06 3
UNIPROTKB|Q9P2L0 - symbol:WDR35 "WD repeat-containing pro... 124 8.6e-06 3
UNIPROTKB|F1SCU2 - symbol:WDR35 "Uncharacterized protein"... 123 8.8e-06 3
UNIPROTKB|E7EQF4 - symbol:IFT122 "Intraflagellar transpor... 137 1.5e-05 5
UNIPROTKB|E1BWD7 - symbol:WDR35 "Uncharacterized protein"... 128 2.0e-05 2
WB|WBGene00000906 - symbol:daf-10 species:6239 "Caenorhab... 133 2.0e-05 2
UNIPROTKB|F1P2U6 - symbol:IFT140 "Uncharacterized protein... 142 2.3e-05 2
RGD|1311341 - symbol:Cirh1a "cirrhosis, autosomal recessi... 140 2.3e-05 1
UNIPROTKB|B4DEY9 - symbol:IFT122 "cDNA FLJ56621, highly s... 137 2.6e-05 3
UNIPROTKB|H0Y9Q2 - symbol:IFT122 "Intraflagellar transpor... 133 5.1e-05 1
UNIPROTKB|Q969X6 - symbol:CIRH1A "Cirhin" species:9606 "H... 135 7.9e-05 1
UNIPROTKB|F1N0G0 - symbol:F1N0G0 "Uncharacterized protein... 124 0.00018 3
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 126 0.00025 1
DICTYBASE|DDB_G0290503 - symbol:DDB_G0290503 species:4468... 134 0.00026 1
FB|FBgn0027518 - symbol:CG7609 species:7227 "Drosophila m... 129 0.00032 2
FB|FBgn0260933 - symbol:rempA "reduced mechanoreceptor po... 147 0.00043 2
UNIPROTKB|Q5R994 - symbol:DKFZp459B1739 "Putative unchara... 127 0.00057 1
UNIPROTKB|E9PDG2 - symbol:IFT122 "Intraflagellar transpor... 137 0.00059 3
UNIPROTKB|Q9UG52 - symbol:DKFZp564L232 "Intraflagellar tr... 126 0.00069 1
MGI|MGI:1096573 - symbol:Cirh1a "cirrhosis, autosomal rec... 126 0.00074 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 123 0.00092 1
GENEDB_PFALCIPARUM|PF14_0675 - symbol:PF14_0675 "reticulo... 113 0.00099 2
UNIPROTKB|Q8IKD0 - symbol:Rh2b "Reticulocyte binding prot... 113 0.00099 2
>ZFIN|ZDB-GENE-040827-1 [details] [associations]
symbol:ift172 "intraflagellar transport 172"
species:7955 "Danio rerio" [GO:0045494 "photoreceptor cell
maintenance" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0048793 "pronephros development" evidence=IGI]
[GO:0032006 "regulation of TOR signaling cascade" evidence=IMP]
[GO:0005929 "cilium" evidence=IEA;ISS] [GO:0042384 "cilium
assembly" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50005
PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040827-1 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005929 GO:GO:0045494 Gene3D:1.25.40.10
GO:GO:0042384 InterPro:IPR011044 SUPFAM:SSF50969 GO:GO:0048793
GO:GO:0032006 OMA:MAFIFLN EMBL:AY618923 EMBL:BX511178
IPI:IPI00492368 RefSeq:NP_001002312.1 UniGene:Dr.19771
ProteinModelPortal:Q5RHH4 STRING:Q5RHH4 Ensembl:ENSDART00000061334
GeneID:432389 KEGG:dre:432389 CTD:26160 eggNOG:NOG289811
GeneTree:ENSGT00440000033648 HOGENOM:HOG000259226
HOVERGEN:HBG098449 InParanoid:Q5RHH4 OrthoDB:EOG4F4S95
NextBio:20831026 ArrayExpress:Q5RHH4 Bgee:Q5RHH4 Uniprot:Q5RHH4
Length = 1745
Score = 2661 (941.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 500/1116 (44%), Positives = 760/1116 (68%)
Query: 515 EITDVAIMGNDRYLVARTLLTEFMNPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
E+ V ND + ++ TEFMNPHLISVRLNER+Q ++NKKLAYL+D+ TI ++
Sbjct: 416 ELALVEYGSND---ILGSVRTEFMNPHLISVRLNERRQ-RGVEDNKKLAYLIDIKTIAIV 471
Query: 575 DLIT--NLPTLHINHDSKIDWLELNETAHKLLYRDKKMRLTLLDIRTSEKHNILNYCTFV 632
DL+ NL T I+HDSKIDWLELNET KLL+RDKK+RL L DI +S K +L++C +V
Sbjct: 472 DLVGGYNLGT--ISHDSKIDWLELNETGRKLLFRDKKLRLHLYDIESSVKSTMLSFCPYV 529
Query: 633 QWLPGSDVVVAQSRHNACVWYNIDTPDRITQFPVRGDIIDVIRENGQSEILTQDGNHQLG 692
QW+PGSDVVVAQ+R N CVWY ID+P+R+T FP++GDI+D+ R NG++E++ +G + +
Sbjct: 530 QWVPGSDVVVAQNRGNLCVWYTIDSPERVTMFPLKGDIVDLERSNGKTEVIVNEGVNSIS 589
Query: 693 YELDESLIEFGTAVHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEICY 752
Y LDE LIEFGTA+ D D+ +A +LE+L ++ E E MW+ L++++++ LH+AE C+
Sbjct: 590 YTLDEGLIEFGTAIDDGDYYRATAFLETLEMSA-ETEAMWKTLSKLSLEAQQLHIAERCF 648
Query: 753 AALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENNE 812
AALGD+S FL ET KI + +KE + GD ++ AR+A+L+K FK+AE Y+E N
Sbjct: 649 AALGDVSKARFLNETNKIADAVAKEYD-GDGTDHYQVKARLAMLDKNFKLAEMYYMEQNA 707
Query: 813 IHKAIDMYLKLYKWEDALSLAETNNY-EYNELKKKYIKWLTDTRQEDKAGELYEKEGDHQ 871
+ + ++MY +L+ W++ +++AE + E + L++ Y +L +T Q +KA E+ E EGD
Sbjct: 708 VDEVMEMYQELHMWDECIAVAEGKGHPELDNLRRSYYSYLMETNQNEKAAEVKENEGDFT 767
Query: 872 TALNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVKGLIKNESYIKAGQIYEFTNENEK 931
A+N YLKA +KA L ++ LL + D+VS+I LIK E Y +AG ++E T N++
Sbjct: 768 GAVNLYLKAGLPAKAAWLAMSKDELLSSQDIVSRITAALIKGEFYERAGDLFERTRNNQR 827
Query: 932 ALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAAINHYIEAGKNNKAL 991
ALECYRKG + K +DL R P V LEE WGD+L++ KQ +AAINHYIEAG++ KA+
Sbjct: 828 ALECYRKGNAFKKAVDLARVAFPAEVVKLEEVWGDYLVQQKQMDAAINHYIEAGRSIKAI 887
Query: 992 DTSIKAKQWKKAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVD 1051
+ +I A+QWKKA+ IL++ ++ ++K +AQ++ +V++++ AE+++ D + +D
Sbjct: 888 EAAIAARQWKKALHILELQEDRTAAKYYLK-IAQYYASVQEFEVAERLFVKGDHIKDAID 946
Query: 1052 MYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISM 1111
MY Q G+WE+A+ +A + + ++ ++ + ++LE+E K+KEAERL+ + EPDLAI+M
Sbjct: 947 MYTQAGRWEQAHKLAVKCMTQEDVSVLYVSRAQELEKEGKYKEAERLFTTVDEPDLAITM 1006
Query: 1112 FKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMYR 1171
+K + Y++MI+LV + A+E E +++AE +YL+ +WK A+ MYR
Sbjct: 1007 YKKNKMYDDMIRLVAVHHKDLLQETHIHLAKELEAESRFQEAEYHYLEGQDWKAAVNMYR 1066
Query: 1172 SLNLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQF 1231
++WE+AYRIA ++GG A + V YLWAKSLGG++AV+LLN+ LLE+ I A D Y F
Sbjct: 1067 VNDMWEEAYRIAKTHGGANAHKQVAYLWAKSLGGEAAVKLLNKFGLLETAIDFAADNYTF 1126
Query: 1232 DFAFELAKIGMKSKLEEVHYKYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWEN 1291
DFAFELA++ MK K+ ++H K A+ LED G+FNEAE +FIKA KPKEA+ M++HN+DW N
Sbjct: 1127 DFAFELARLSMKQKIPDIHLKNAMFLEDQGKFNEAEIEFIKAGKPKEAVLMHVHNKDWSN 1186
Query: 1292 AERIANEHDPTSIGDILLNQSKCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDAL 1351
A+R+A HDP S+ DIL++Q+K F+ + F K E LLRA + +L I+ YK MW DA+
Sbjct: 1187 AQRVAEAHDPESVADILVSQAKFCFDQKEFQKAEAFLLRAQRPELAIKYYKDAGMWTDAM 1246
Query: 1352 RVCGEYVPSKLPLLQQEYEKEINTNISKDIHSLITQARQWEQNGEFYNAVECYLKIKNV- 1410
R+C +Y+PSKL +LQ+EYE E N + +I QA++WEQ GE+ AV+CYLK+K+
Sbjct: 1247 RICKDYLPSKLSVLQKEYESEGNWGVE----GMIEQAQEWEQTGEYSRAVDCYLKVKDSS 1302
Query: 1411 DVNLMVKILNEVTQLTLKYLNHDQSYKILPSLVPKLMEFKQYDLAVRVYLNIDMVKEAVD 1470
+++L++K + +L +K+L+HD++ + + P+L++ ++Y+ A +YLN+D++K A+D
Sbjct: 1303 NLDLLLKCWMKAAELAIKFLSHDKAVDVSQIVGPRLIQLRKYNEAAELYLNLDLIKNAID 1362
Query: 1471 IFIYTQNWNKARKLCAELKPEYLSYVENQYKEWLKKNGDADMLSEIDINTALDMLMKQGQ 1530
FI + WNKA+++ EL P YV+ +YKE LK G D L +D+ ALDM ++GQ
Sbjct: 1363 AFIEGEEWNKAKRVAKELDPRLEEYVDKRYKEHLKNQGKVDSLVGVDVVAALDMYAERGQ 1422
Query: 1531 WNQCLDKAKNINTNLLHKYMALYAMHLIKNKEYAQLTQLFNEYGTPNIPQFYNIYKQTAY 1590
W +C+D A N +LHKY+ALYA HLIK E ++ L+ ++G P Q +NIYK+
Sbjct: 1423 WEKCIDTASKQNFKVLHKYIALYATHLIKEGEVEKVLSLYIQHGVPAYSQNFNIYKRMFQ 1482
Query: 1591 CILN----DSNENVNLIISLRNMLFNVIKNQNNNEE 1622
++N D E + LR++L + +N + E
Sbjct: 1483 ELVNLRDRDCAEAFRMWSDLRDVLLLLCENLTKSSE 1518
Score = 1167 (415.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 213/375 (56%), Positives = 289/375 (77%)
Query: 43 GRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
G+K+YVVK +AFSPDSTK+AVAQ+DNIIF+YK+G++WGDKKVICNKFIQ VT++VW +
Sbjct: 63 GKKTYVVKSMAFSPDSTKIAVAQTDNIIFVYKIGEEWGDKKVICNKFIQTSAVTSLVWPS 122
Query: 103 DGPIIYGQSDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVT 162
+ II+G ++GK++ A+ K +K+ T+Y ++S+VV+L NV G G+LSGHADG++VRY++
Sbjct: 123 EHAIIFGLAEGKVRQANTKTSKSSTIYGTDSYVVSLTSNVSGKGILSGHADGTVVRYFID 182
Query: 163 EDASNFDQQQGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYK 222
++ S + QG+++ H PPYAL+W I+ AG D+ + Y +G V + FDY+
Sbjct: 183 DEGSG--ESQGKLLTHACPPYALAWGTNSIIVAGCDKKIVAYGKEGNVIQTFDYSRDR-A 239
Query: 223 EREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGS 282
E+EFTVA SSPSGQ++VVGS+D +++F WSP K W+E K IPNLYTI+ALSWK+DGS
Sbjct: 240 EKEFTVAASSPSGQSIVVGSFDRLRVFNWSPRKGTWDESSPKEIPNLYTITALSWKKDGS 299
Query: 283 RIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYE 342
R++ G LCG VE+F+ L+R+I+K KFEM YV SQV+V+ LS G V+LKSQYGYE
Sbjct: 300 RLSVGTLCGGVEMFDCCLRRSIYKNKFEMTYVGLSQVIVRNLS---TGTRVVLKSQYGYE 356
Query: 343 ITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGE 402
I +V +MG D+YLVA T DTLLLGDL N LSEV W SG NEKF+F+N TVC++FNAGE
Sbjct: 357 IDEVKVMGKDQYLVAHTSDTLLLGDLVSNKLSEVAWQGSGGNEKFFFENETVCMIFNAGE 416
Query: 403 LSIIEYGNNEILTCV 417
L+++EYG+N+IL V
Sbjct: 417 LALVEYGSNDILGSV 431
Score = 370 (135.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 77/156 (49%), Positives = 104/156 (66%)
Query: 419 IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIW 478
+++F WSP K W+E K IPNLYTI+ALSWK+DGSR++ G LCG VE+F+ L+R+I+
Sbjct: 263 LRVFNWSPRKGTWDESSPKEIPNLYTITALSWKKDGSRLSVGTLCGGVEMFDCCLRRSIY 322
Query: 479 KGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTLLTEFM 538
K KFEM YV SQV+V+ LS G V+LKSQYGYEI +V +MG D+YLVA T T +
Sbjct: 323 KNKFEMTYVGLSQVIVRNLS---TGTRVVLKSQYGYEIDEVKVMGKDQYLVAHTSDTLLL 379
Query: 539 NPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
L+S +L+E V Q + + T+C+I
Sbjct: 380 GD-LVSNKLSE---VAWQGSGGNEKFFFENETVCMI 411
Score = 64 (27.6 bits), Expect = 0., Sum P(3) = 0.
Identities = 35/145 (24%), Positives = 61/145 (42%)
Query: 198 DRIVTIYESDGRVHRIFDYTA--PHYKEREFTVACS--SPSGQAVVVGSYDNIKLFAWSP 253
DR+V +Y+ G F P Y ++ + V SP + V DNI +F +
Sbjct: 37 DRVVILYDEQGEKRDRFTTKPADPKYGKKTYVVKSMAFSPDSTKIAVAQTDNI-IFVYKI 95
Query: 254 SKSVWEEQP---NKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWK-GKF 309
+ W ++ NK I +++L W + + I GL E +++ K K
Sbjct: 96 GEE-WGDKKVICNKFIQTS-AVTSLVWPSEHAIIF--GLA------EGKVRQANTKTSKS 145
Query: 310 EMIYVSPSQVLVKPLSGESKGRGVI 334
IY + S V+ L+ G+G++
Sbjct: 146 STIYGTDSYVV--SLTSNVSGKGIL 168
Score = 39 (18.8 bits), Expect = 7.4e-116, Sum P(2) = 7.4e-116
Identities = 10/50 (20%), Positives = 22/50 (44%)
Query: 398 FNAGELSIIEYGNNEILTCVSIKLFAWSPSKSVWEEQPNKTIPNLYTISA 447
FN E+ I+ G + + + WS ++ V E +++ ++ A
Sbjct: 1158 FNEAEIEFIKAGKPKEAVLMHVHNKDWSNAQRVAEAHDPESVADILVSQA 1207
>UNIPROTKB|E1BVT1 [details] [associations]
symbol:IFT172 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001841 "neural tube formation" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0007368 "determination of
left/right symmetry" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0016485 "protein processing"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011990
InterPro:IPR015943 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005929 Gene3D:1.25.40.10 GO:GO:0016485 GO:GO:0007224
OMA:MAFIFLN GeneTree:ENSGT00440000033648 EMBL:AADN02018468
EMBL:AADN02018469 IPI:IPI00580165 Ensembl:ENSGALT00000026634
Uniprot:E1BVT1
Length = 1753
Score = 2580 (913.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 486/1120 (43%), Positives = 748/1120 (66%)
Query: 515 EITDVAIMGNDRYLVARTLLTEFMNPHLIS--VRLNERKQVHSQQENKKLAYLLDLHTIC 572
E+T V ND + ++ TEF+NPHL+S VR+NER+Q +ENK+LAYL+D+ TI
Sbjct: 416 ELTLVEYGSND---ILGSVRTEFVNPHLVSNSVRINERQQ-RGVEENKRLAYLIDIKTIA 471
Query: 573 V-IDLITNLPTLHINHDSKIDWLELNETAHKLLYRDKKMRLTLLDIRTSEKHNILNYCTF 631
+DL+ N ++HDSKIDWLELNET HKLL+RDKKMRL L DI +S K ILNYC++
Sbjct: 472 TEVDLVGNYSVGTVSHDSKIDWLELNETGHKLLFRDKKMRLQLYDIGSSTKTTILNYCSY 531
Query: 632 VQWLPGSDVVVAQSRHNACVWYNIDTPDRITQFPVRGDIIDVIRENGQSEILTQDGNHQL 691
VQW+PGSDVVVAQSR+N C+WYNID P+R+T FP++GD++++ R +G++E++ +G + +
Sbjct: 532 VQWVPGSDVVVAQSRNNLCIWYNIDAPERVTMFPLKGDVVNLERNDGKTEVIVSEGVNTV 591
Query: 692 GYELDESLIEFGTAVHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEIC 751
Y LDE LIEFGTA+ D D+ +A +LE+L ++ E E MW+ L+++A++ LH+AE C
Sbjct: 592 SYTLDEGLIEFGTAIDDEDYHRATAFLETLEMSA-ETEAMWKTLSKLALEARQLHIAERC 650
Query: 752 YAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENN 811
+AALG+++ FL ET I + ++E+ GD + AR+A+L+K +K+AE I+LE N
Sbjct: 651 FAALGNVAKARFLHETNAIADQAAQEHG-GDGTDHYLVRARLAMLDKNYKLAEMIFLEQN 709
Query: 812 EIHKAIDMYLKLYKWEDALSLAETNNYEY-NELKKKYIKWLTDTRQEDKAGELYEKEGDH 870
+A+DMY +L+ W++ + +AE + ++L++ Y +WL DT+QE+KAGE+ E +GD+
Sbjct: 710 ATEEAMDMYQELHMWDECIVVAEAKGHPMLDKLRRGYYQWLLDTQQEEKAGEVQEGQGDY 769
Query: 871 QTALNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVKGLIKNESYIKAGQIYEFTNENE 930
A++ YL+A +KA L N L+ N DV+++I LI+ E + +AG ++E
Sbjct: 770 LAAVSLYLRAGLPAKAARLAMNRDELMTNGDVINRISTALIRGELFEQAGDLFEKVGNAR 829
Query: 931 KALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAAINHYIEAGKNNKA 990
KALECY KG + K ++L R P V LEE WGDHL++ KQ +AAINHYIEA + KA
Sbjct: 830 KALECYCKGNAFLKAVELARLAFPAEVVKLEEAWGDHLVQQKQLDAAINHYIEARCSIKA 889
Query: 991 LDTSIKAKQWKKAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIV 1050
++ ++ A+QWKKA+ IL + KQ A++ +AQH+ +++Y+ AE++Y D + +
Sbjct: 890 IEAALGARQWKKAIYILD-LQEKQTAAKYYPKIAQHYAALQEYQIAEELYIKGDQTKDAI 948
Query: 1051 DMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAIS 1110
DMY Q G WE+A+ +A + ++ ++ +I + +++E++ K+KEAERLY+ + EPDLAI+
Sbjct: 949 DMYTQAGLWEQAHKLAIKCMSQEDVSVLYITQAQEMEKQGKYKEAERLYITVDEPDLAIT 1008
Query: 1111 MFKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMY 1170
M+K + Y+ M++LV Y +E E ++AE +YL +WK + MY
Sbjct: 1009 MYKKCKMYDEMVRLVAKYHKDLLSDTHLHLGKELEVEGRLQEAEYHYLQAKDWKATVNMY 1068
Query: 1171 RSLNLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQ 1230
R ++WE+AYR+A ++GG + + V Y+WAKSLGG++AV+LL++ LLE I +A D+
Sbjct: 1069 RMNDMWEEAYRVAKAHGGANSYKHVAYMWAKSLGGEAAVKLLSKFGLLEMAIDHAADSGV 1128
Query: 1231 FDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWE 1290
F+FAFELA++ MK K+ E+H KYA+ LED G+F EAE +FIKA KPKEA+ M++HNQ+W+
Sbjct: 1129 FEFAFELARLSMKQKMPEIHLKYAMFLEDEGKFEEAEAEFIKAGKPKEAVLMFVHNQNWD 1188
Query: 1291 NAERIANEHDPTSIGDILLNQSKCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDA 1350
A+R+A HDP S+ D+L+ Q++ FE+ F K E LLRA + +L I+ YK MW++A
Sbjct: 1189 AAQRVAEAHDPDSVADVLVGQARFAFEHREFQKAEAFLLRAQRPELAIKYYKEADMWSEA 1248
Query: 1351 LRVCGEYVPSKLPLLQQEYEKEINTNIS-KDIHSLITQARQWEQNGEFYNAVECYLKIKN 1409
LR+C EYVP +L LQ+E +E S + L+ QAR+WEQ GE+ AV+CYLK+++
Sbjct: 1249 LRICKEYVPGRLEELQKECGREAAKKGSGRGTEGLLEQAREWEQAGEYARAVDCYLKVQD 1308
Query: 1410 VDVN-LMVKILNEVTQLTLKYLNHDQSYKILPSLVPKLMEFKQYDLAVRVYLNIDMVKEA 1468
+ LM K L + +L +K+L+ QS ++ ++ P+L+ K+Y A +YLN+D+++EA
Sbjct: 1309 SSNSVLMEKCLLKAAELAIKFLSQSQSMEVTRTVAPQLVAMKKYSSAAELYLNMDLIREA 1368
Query: 1469 VDIFIYTQNWNKARKLCAELKPEYLSYVENQYKEWLKKNGDADMLSEIDINTALDMLMKQ 1528
+D FI + W+KA+++ EL P YV+ +YKE+LK G D L +D+ ALDM +Q
Sbjct: 1369 IDAFIEGEEWSKAKRVAKELDPRSEEYVDQRYKEYLKNQGKVDSLVGVDVMAALDMYAEQ 1428
Query: 1529 GQWNQCLDKAKNINTNLLHKYMALYAMHLIKNKEYAQLTQLFNEYGTPNIPQFYNIYKQT 1588
QW +CL+ A N +LHKY+ALYA HLI+ + + L+ ++G P PQ +NIYK+
Sbjct: 1429 EQWEKCLEVAAKQNYKVLHKYVALYATHLIREGSWDKALSLYVQHGAPVNPQNFNIYKRL 1488
Query: 1589 AYCILNDSNENVNLIIS----LRNMLFNVIKNQNNNEEID 1624
++N N S LR++LF++ +N + E++
Sbjct: 1489 FVEMVNAPGMNCAEAYSSWADLRDVLFSLCENLVKSSEVN 1528
Score = 1169 (416.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 212/375 (56%), Positives = 284/375 (75%)
Query: 43 GRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
GRKSYVVKG+AFSPDSTK+A+ Q+DNI+++Y++G++WGDKKVICNKFIQ VT ++W A
Sbjct: 63 GRKSYVVKGMAFSPDSTKIAIGQTDNIVYVYRIGEEWGDKKVICNKFIQMSAVTCLLWPA 122
Query: 103 DGPIIYGQSDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVT 162
+ I++G ++GK++ A+ K NK+ T+Y ++S+VV+L NV G G+LSGHADG+IVR++
Sbjct: 123 ENTIVFGLAEGKVRLANTKNNKSSTIYGTDSYVVSLASNVSGKGILSGHADGTIVRFFFD 182
Query: 163 EDASNFDQQQGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYK 222
++ S + QG++V HP PPYAL+W I+AAG D+ + Y +G V + FDY+
Sbjct: 183 DEGSG--ESQGKLVMHPCPPYALAWALNSIVAAGCDKKIVAYGKEGNVIQTFDYSRDS-S 239
Query: 223 EREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGS 282
E+EFT A +SP GQAVV+GSYD +++ WSP + WEE K IP+LYTI++L+WKRDGS
Sbjct: 240 EKEFTTAAASPGGQAVVIGSYDRLRVLNWSPRRGAWEEAKPKEIPHLYTITSLAWKRDGS 299
Query: 283 RIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYE 342
RI G LCG VE F+ L+R+I+K KFEM YV PSQV+VK LS G V+LKS YGYE
Sbjct: 300 RICAGTLCGGVEQFDCCLRRSIYKNKFEMTYVGPSQVIVKNLS---TGTRVVLKSHYGYE 356
Query: 343 ITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGE 402
I +V I+G DRYLVA T DTLLLGD++ N LSEV W SG NEKF+FDN VC++FNAGE
Sbjct: 357 IDEVKILGKDRYLVAHTSDTLLLGDINSNKLSEVAWQGSGGNEKFFFDNENVCMIFNAGE 416
Query: 403 LSIIEYGNNEILTCV 417
L+++EYG+N+IL V
Sbjct: 417 LTLVEYGSNDILGSV 431
Score = 362 (132.5 bits), Expect = 4.6e-304, Sum P(2) = 4.6e-304
Identities = 87/226 (38%), Positives = 127/226 (56%)
Query: 419 IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIW 478
+++ WSP + WEE K IP+LYTI++L+WKRDGSRI G LCG VE F+ L+R+I+
Sbjct: 263 LRVLNWSPRRGAWEEAKPKEIPHLYTITSLAWKRDGSRICAGTLCGGVEQFDCCLRRSIY 322
Query: 479 KGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTLLTEFM 538
K KFEM YV PSQV+VK LS G V+LKS YGYEI +V I+G DRYLVA T T +
Sbjct: 323 KNKFEMTYVGPSQVIVKNLS---TGTRVVLKSHYGYEIDEVKILGKDRYLVAHTSDTLLL 379
Query: 539 NPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI--------------DLITNLPTLH 584
+ N+ +V Q + D +C+I D++ ++ T
Sbjct: 380 G----DINSNKLSEVAWQGSGGNEKFFFDNENVCMIFNAGELTLVEYGSNDILGSVRTEF 435
Query: 585 INHDSKIDWLELNETAHKLLYRDKKMRLTLLDIRT--SEKHNILNY 628
+N + + +NE + + +K++ L+DI+T +E + NY
Sbjct: 436 VNPHLVSNSVRINERQQRGVEENKRLAY-LIDIKTIATEVDLVGNY 480
Score = 65 (27.9 bits), Expect = 3.7e-119, Sum P(3) = 3.7e-119
Identities = 64/317 (20%), Positives = 126/317 (39%)
Query: 1036 AEKIYSHCDMHEQIVDMYHQ--TGQWEKAYA-IAEQHLNVGEIKAT--FIQKCKQLEEEN 1090
A K Y DM + + + + G+ E+ + G + T +++ ++ E+
Sbjct: 1235 AIKYYKEADMWSEALRICKEYVPGRLEELQKECGREAAKKGSGRGTEGLLEQAREWEQAG 1294
Query: 1091 KFKEAERLYLIIGEPDLAISMFKNQ-RQYENMIKLVRNYXXXXXXXXXXXXAQECEESKN 1149
++ A YL + + ++ M K + E IK + A + K
Sbjct: 1295 EYARAVDCYLKVQDSSNSVLMEKCLLKAAELAIKFLSQ---SQSMEVTRTVAPQLVAMKK 1351
Query: 1150 YKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIA--LSNGGQEAVEPVVYLWAKSLGG-D 1206
Y A + YL+ + + AI + W A R+A L +E V+ + K+ G D
Sbjct: 1352 YSSAAELYLNMDLIREAIDAFIEGEEWSKAKRVAKELDPRSEEYVDQRYKEYLKNQGKVD 1411
Query: 1207 SAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFNEA 1266
S V + + ++ L+ + Q++ E+A L + YA L G +++A
Sbjct: 1412 SLVGV-DVMAALDMY----AEQEQWEKCLEVAAKQNYKVLHKYVALYATHLIREGSWDKA 1466
Query: 1267 ETQFIKANKPKEAISMYIHNQ---DWENAERI--ANEHDP-TSIGDILL----NQSKC-E 1315
+ +++ P + I+ + + NA + A + + D+L N K E
Sbjct: 1467 LSLYVQHGAPVNPQNFNIYKRLFVEMVNAPGMNCAEAYSSWADLRDVLFSLCENLVKSSE 1526
Query: 1316 FENENFSKFETLLLRAH 1332
++FET+LL +H
Sbjct: 1527 VNTPAHAEFETMLLISH 1543
Score = 39 (18.8 bits), Expect = 3.7e-119, Sum P(3) = 3.7e-119
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 400 AGELSIIEYGNNEILTCVSIKLFAWSPSKS 429
AGE ++ G + L VS+ L A P+K+
Sbjct: 759 AGE---VQEGQGDYLAAVSLYLRAGLPAKA 785
>UNIPROTKB|E1BJT7 [details] [associations]
symbol:LOC100848219 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0016485 "protein processing" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] [GO:0001841 "neural tube formation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005929
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0007368 GO:GO:0042384
GO:GO:0009953 GO:GO:0016485 GO:GO:0007224 GO:GO:0001841 OMA:MAFIFLN
GeneTree:ENSGT00440000033648 EMBL:DAAA02031593 IPI:IPI00685930
RefSeq:XP_003582850.1 RefSeq:XP_003586706.1
ProteinModelPortal:E1BJT7 PRIDE:E1BJT7 Ensembl:ENSBTAT00000024164
GeneID:100848219 KEGG:bta:100848219 Uniprot:E1BJT7
Length = 1749
Score = 2578 (912.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 484/1114 (43%), Positives = 747/1114 (67%)
Query: 515 EITDVAIMGNDRYLVARTLLTEFMNPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
E+T V ND RT EFMNPHLISVR+NER+Q ++NKKLAYL+D+ TI ++
Sbjct: 416 ELTLVEYGSNDTLGSVRT---EFMNPHLISVRINERRQ-RGMEDNKKLAYLVDIKTIAIV 471
Query: 575 DLITNLPTLHINHDSKIDWLELNETAHKLLYRDKKMRLTLLDIRTSEKHNILNYCTFVQW 634
DLI I+H+S++DWLELNET HKLL+RD+K+RL L DI + K ILN+C++VQW
Sbjct: 472 DLIGGYNIGTISHESRVDWLELNETGHKLLFRDRKLRLHLYDIESCSKTMILNFCSYVQW 531
Query: 635 LPGSDVVVAQSRHNACVWYNIDTPDRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYE 694
+PGSDV+VAQ+R+N CVWYNI+ P+R+T +RGD++ + R G++E++ +G + Y
Sbjct: 532 VPGSDVLVAQNRNNLCVWYNIEAPERVTTSSIRGDVVGLERGGGKTEVMVTEGVTTVAYT 591
Query: 695 LDESLIEFGTAVHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEICYAA 754
LDE LIEFGTA+ D ++ +A +LE+L + E E MW+ L++++++ LH+AE C++A
Sbjct: 592 LDEGLIEFGTAIDDGNYTRATAFLETLEMTP-ETEAMWKTLSKLSLEAKQLHIAERCFSA 650
Query: 755 LGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENNEIH 814
LG ++ FL ET +I + S+E G+ ++ AR+A+L K +K+AE I+LE N +
Sbjct: 651 LGHVAKARFLHETNEIADQVSREYG-GEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVE 709
Query: 815 KAIDMYLKLYKWEDALSLAETNNYEYNE-LKKKYIKWLTDTRQEDKAGELYEKEGDHQTA 873
+A+DMY +L++W++ +++AE + E L++ Y +WL DT+QE++AGEL E +GD A
Sbjct: 710 EAMDMYQELHRWDECIAVAEAKGHPALEKLRRGYYQWLMDTQQEERAGELQESQGDGLAA 769
Query: 874 LNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVKGLIKNESYIKAGQIYEFTNENEKAL 933
++ YLKA +KA LV N LL N ++V I LIK E Y +AG ++E ++AL
Sbjct: 770 ISLYLKAGLPAKAARLVLNREELLANTELVEHITAALIKGELYERAGDLFEKIRNPQRAL 829
Query: 934 ECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAAINHYIEAGKNNKALDT 993
ECY KG + K ++L R P V LEE WGDHL++ KQ +AAINHYIEA + KA++
Sbjct: 830 ECYCKGSAFMKAVELARLAFPVEVVRLEEAWGDHLVQQKQLDAAINHYIEARCSIKAIEA 889
Query: 994 SIKAKQWKKAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMY 1053
++ A+QWKKA+ IL + ++ +++ +AQH+ ++++Y+ AE++Y+ D + +DMY
Sbjct: 890 ALGARQWKKAIYILD-LQDRNTASKYYPRVAQHYASLQEYEIAEELYTKGDRTKDAIDMY 948
Query: 1054 HQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISMFK 1113
Q G+WE+A+ +A + + ++ +I + +++E++ K++EAERLY+ + EPDLAI+MFK
Sbjct: 949 TQAGRWEQAHKLAMKCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVEEPDLAITMFK 1008
Query: 1114 NQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMYRSL 1173
+ Y++MI+LV + +E E ++AE +YL+ EWK + MYRS
Sbjct: 1009 KHKLYDDMIRLVGKHHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAQEWKATVNMYRSN 1068
Query: 1174 NLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQFDF 1233
LWE+AYR+A ++GG A + V YLWAKSLGG++AVRLLN+L LLE+ I +A D F+F
Sbjct: 1069 GLWEEAYRVAKAHGGANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEAAIDHAADNCSFEF 1128
Query: 1234 AFELAKIGMKSKLEEVHYKYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAE 1293
AFEL+++ +K K E+H +YA+ LED G+F EAE +FIKA KPKEA+ M++HNQDWE A+
Sbjct: 1129 AFELSRLALKHKTPEIHLRYAMYLEDEGKFEEAEAEFIKAGKPKEAVLMFVHNQDWEAAQ 1188
Query: 1294 RIANEHDPTSIGDILLNQSKCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDALRV 1353
R+A HDP S+ ++L+ Q++ E ++F K E LLLRA + L + YK +W+DALR+
Sbjct: 1189 RVAEAHDPDSVAEVLVGQARGALEEKDFQKAEGLLLRAQRPGLALNYYKEAGLWSDALRI 1248
Query: 1354 CGEYVPSKLPLLQQEYEKEINTNISKDIHSLITQARQWEQNGEFYNAVECYLKIKNVDVN 1413
C +YVP +L LQ+EYE+E ++ + L+ QARQWEQ GE+ AV+CYLK+++ +
Sbjct: 1249 CKDYVPGQLEALQEEYEREATKKGARGMEGLVEQARQWEQAGEYSRAVDCYLKVRDAGSS 1308
Query: 1414 LMV-KILNEVTQLTLKYLNHDQSYKILPSLVPKLMEFKQYDLAVRVYLNIDMVKEAVDIF 1472
+V K + +L++K+L +S +++ ++ P+L+ ++ A +YLN+D+VKEA+D F
Sbjct: 1309 SLVEKCWLKAAELSIKFLPPPRSLEVVRAVGPQLIGIGKHSAAAELYLNLDLVKEAIDAF 1368
Query: 1473 IYTQNWNKARKLCAELKPEYLSYVENQYKEWLKKNGDADMLSEIDINTALDMLMKQGQWN 1532
I + WNKA+++ EL P Y YV+ YKE+LK G D L +D+ ALD+ ++QGQW+
Sbjct: 1369 IEGEEWNKAKRVAKELDPRYEDYVDQCYKEFLKSQGKVDSLVGVDVVAALDLYVEQGQWD 1428
Query: 1533 QCLDKAKNINTNLLHKYMALYAMHLIKNKEYAQLTQLFNEYGTPNIPQFYNIYKQTAYCI 1592
+C++ A N +LHKY+ALYA HLI+ AQ L+ ++G P PQ +NIYK+ +
Sbjct: 1429 KCIETATKQNYKILHKYVALYATHLIREGGCAQALALYVQHGAPANPQNFNIYKRIFTDM 1488
Query: 1593 LN----DSNENVNLIISLRNMLFNVIKNQNNNEE 1622
++ +S E + LR++LFN+ +N + E
Sbjct: 1489 VSSPGTNSAEAYHSWADLRDVLFNLCENLVKSSE 1522
Score = 1148 (409.2 bits), Expect = 0., Sum P(2) = 0.
Identities = 210/375 (56%), Positives = 281/375 (74%)
Query: 43 GRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
GRKSY+VKG+AFSPDSTK+A+ Q+DNII++YK+G+DWGDKKVICNKFIQ VT + W A
Sbjct: 63 GRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQWPA 122
Query: 103 DGPIIYGQSDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVT 162
+ I++G ++GK++ A+ K NK+ T+Y ++S+VV+L N G G+LSGHADG+IVRY+
Sbjct: 123 EYIIVFGLAEGKVRLANTKTNKSSTIYGTDSYVVSLTTNCSGKGILSGHADGTIVRYFFD 182
Query: 163 EDASNFDQQQGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYK 222
++ S + QG++V HP PPYAL+W I+AAG DR + Y +G V + FDY+
Sbjct: 183 DEGSG--ESQGKLVNHPCPPYALAWATNSIVAAGCDRRIVAYGKEGHVLQTFDYSRDPL- 239
Query: 223 EREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGS 282
EREFT A +SP GQ+VV+GSYD +++ WSP +++WEE K I NLYTI+AL+WKRDGS
Sbjct: 240 EREFTTAAASPGGQSVVLGSYDRLRVLNWSPRRNIWEEAKPKEIANLYTITALAWKRDGS 299
Query: 283 RIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYE 342
R+ G LCG VE F+ L+R+I+K KFE+ YV PSQV+VK LS G V+LKS YGYE
Sbjct: 300 RLCAGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYE 356
Query: 343 ITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGE 402
+ +V I+G +RYLVA T DTLLLGDL N LSEV W SG NEK++F+N VC++FNAGE
Sbjct: 357 VEEVKILGKERYLVAHTSDTLLLGDLTTNRLSEVAWQGSGGNEKYFFENENVCMIFNAGE 416
Query: 403 LSIIEYGNNEILTCV 417
L+++EYG+N+ L V
Sbjct: 417 LTLVEYGSNDTLGSV 431
Score = 365 (133.5 bits), Expect = 3.6e-304, Sum P(2) = 3.6e-304
Identities = 120/393 (30%), Positives = 187/393 (47%)
Query: 198 DRIVTIYESDGRVHRIFDYTAP---HYKEREFTVA--CSSPSGQAVVVGSYDNIKLFAWS 252
DR+V +Y+ G F T P Y + + V SP + +G DNI ++ +
Sbjct: 37 DRVVLLYDEHGERRDKFS-TKPADMKYGRKSYMVKGMAFSPDSTKIAIGQTDNI-IYVYK 94
Query: 253 PSKSVWEEQP---NKTIPNLYTISALSWKRDGSRIACGGLC-GSVELFESVLKR--TIWK 306
+ W ++ NK I ++ L W + I GL G V L + + TI+
Sbjct: 95 IGED-WGDKKVICNKFIQTS-AVTCLQWPAE--YIIVFGLAEGKVRLANTKTNKSSTIYG 150
Query: 307 GKFEMIYVSPSQVLVKPLSGESKGRGV-ILKSQYGYEITDVAIMGND--RYLVARTPDTL 363
++ ++ + LSG + G V G + ++ + Y +A +++
Sbjct: 151 TDSYVVSLTTNCSGKGILSGHADGTIVRYFFDDEGSGESQGKLVNHPCPPYALAWATNSI 210
Query: 364 LLGDLHRNLLSEVLWPDSGRN-EKFYFDNVTVCLVFNAGELSIIEYGNNEILTCVS-IKL 421
+ R + V + G + F + + F S G + +L +++
Sbjct: 211 VAAGCDRRI---VAYGKEGHVLQTFDYSRDPLEREFTTAAAS--PGGQSVVLGSYDRLRV 265
Query: 422 FAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGK 481
WSP +++WEE K I NLYTI+AL+WKRDGSR+ G LCG VE F+ L+R+I+K K
Sbjct: 266 LNWSPRRNIWEEAKPKEIANLYTITALAWKRDGSRLCAGTLCGGVEQFDCCLRRSIYKNK 325
Query: 482 FEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTLLTEFMNPH 541
FE+ YV PSQV+VK LS G V+LKS YGYE+ +V I+G +RYLVA T T +
Sbjct: 326 FELTYVGPSQVIVKNLSS---GTRVVLKSHYGYEVEEVKILGKERYLVAHTSDTLLLGD- 381
Query: 542 LISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
L + RL+E V Q Y + +C+I
Sbjct: 382 LTTNRLSE---VAWQGSGGNEKYFFENENVCMI 411
Score = 47 (21.6 bits), Expect = 3.7e-114, Sum P(2) = 3.7e-114
Identities = 44/197 (22%), Positives = 78/197 (39%)
Query: 1150 YKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIA--LSNGGQEAVEPVVYLWAKSLGG-D 1206
+ A + YL+ + K AI + W A R+A L ++ V+ + KS G D
Sbjct: 1348 HSAAAELYLNLDLVKEAIDAFIEGEEWNKAKRVAKELDPRYEDYVDQCYKEFLKSQGKVD 1407
Query: 1207 SAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFNEA 1266
S V + + ++ L+ + Q+D E A L + YA L G +A
Sbjct: 1408 SLVGV-DVVAALDLYVEQG----QWDKCIETATKQNYKILHKYVALYATHLIREGGCAQA 1462
Query: 1267 ETQFIKANKPKEAISMYIHNQDWEN--AERIANE----HDPTSIGDILLNQSK-----CE 1315
+++ P + I+ + + + + N H + D+L N + E
Sbjct: 1463 LALYVQHGAPANPQNFNIYKRIFTDMVSSPGTNSAEAYHSWADLRDVLFNLCENLVKSSE 1522
Query: 1316 FENENFSKFETLLLRAH 1332
+ +FET+LL AH
Sbjct: 1523 ANSPAHEEFETMLLIAH 1539
>MGI|MGI:2682064 [details] [associations]
symbol:Ift172 "intraflagellar transport 172" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0001841 "neural
tube formation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005929
"cilium" evidence=IDA] [GO:0005932 "microtubule basal body"
evidence=ISO] [GO:0007224 "smoothened signaling pathway"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IGI;IMP] [GO:0016485 "protein processing" evidence=IMP]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IMP] [GO:0031514 "motile cilium" evidence=ISO] [GO:0042384
"cilium assembly" evidence=IMP] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50005 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2682064 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005929 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0009434 GO:GO:0007368 GO:GO:0005932
GO:GO:0042384 GO:GO:0009953 GO:GO:0016485 GO:GO:0007224
GO:GO:0001841 OMA:MAFIFLN CTD:26160 eggNOG:NOG289811
GeneTree:ENSGT00440000033648 HOGENOM:HOG000259226
HOVERGEN:HBG098449 OrthoDB:EOG4F4S95 ChiTaRS:IFT172 EMBL:AY339616
EMBL:AK006007 EMBL:BC051928 EMBL:BC060948 EMBL:BC066096
EMBL:AK122461 IPI:IPI00762129 IPI:IPI00890239 RefSeq:NP_080574.5
UniGene:Mm.293023 ProteinModelPortal:Q6VH22 SMR:Q6VH22
STRING:Q6VH22 PhosphoSite:Q6VH22 PaxDb:Q6VH22 PRIDE:Q6VH22
Ensembl:ENSMUST00000041565 GeneID:67661 KEGG:mmu:67661
UCSC:uc008wya.1 UCSC:uc008wyb.1 InParanoid:Q6VH22 NextBio:325173
Bgee:Q6VH22 Genevestigator:Q6VH22 Uniprot:Q6VH22
Length = 1749
Score = 2578 (912.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 486/1114 (43%), Positives = 739/1114 (66%)
Query: 515 EITDVAIMGNDRYLVARTLLTEFMNPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
E+T V ND RT EFMNPHLISVR+NER Q ++NKKLAYL+D+ TI ++
Sbjct: 416 ELTLVEYGSNDSLGSVRT---EFMNPHLISVRINERCQ-RGMEDNKKLAYLVDIKTIAIV 471
Query: 575 DLITNLPTLHINHDSKIDWLELNETAHKLLYRDKKMRLTLLDIRTSEKHNILNYCTFVQW 634
DLI I+H+S++DWLELNET HKLL+RD+K+RL L DI + K ILN+C++VQW
Sbjct: 472 DLIGGYNIGTISHESRVDWLELNETGHKLLFRDRKLRLHLYDIESCSKTMILNFCSYVQW 531
Query: 635 LPGSDVVVAQSRHNACVWYNIDTPDRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYE 694
+PGSDV+VAQ+R++ CVWYNI+ P+R+T +RGD++ + R G++E++ +G + Y
Sbjct: 532 VPGSDVLVAQNRNSLCVWYNIEAPERVTMSSIRGDVVGLERGGGKTEVMVTEGVTTVAYT 591
Query: 695 LDESLIEFGTAVHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEICYAA 754
LDE LIEFGTA+ D ++ +A +LE+L + E E MW+ L+++A++ LH AE C++A
Sbjct: 592 LDEGLIEFGTAIDDGNYTRATAFLETLEMTP-ETEAMWKTLSKLALEARQLHTAERCFSA 650
Query: 755 LGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENNEIH 814
LG ++ FL ET +I + S+E G+ ++ AR+A+L K +K+AE I+LE N +
Sbjct: 651 LGHVAKARFLHETNEIADQVSREYG-GEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVE 709
Query: 815 KAIDMYLKLYKWEDALSLAETNNYEYNE-LKKKYIKWLTDTRQEDKAGELYEKEGDHQTA 873
+A+DMY +L++WE+ +++AE + E L++ Y +WL DT+QE++AGEL E +GD A
Sbjct: 710 EAMDMYQELHRWEECIAVAEAKGHPALEKLRRDYYQWLMDTQQEERAGELQESQGDGLAA 769
Query: 874 LNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVKGLIKNESYIKAGQIYEFTNENEKAL 933
++ YLKA +KA LV LL N ++V I LIK E Y +AG ++E ++AL
Sbjct: 770 ISLYLKAGLPAKAARLVLTREELLANTELVEHITTALIKGELYERAGDLFEKIRNPQRAL 829
Query: 934 ECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAAINHYIEAGKNNKALDT 993
ECY KG + K ++L R P V LEE WGDHL++ KQ +AAINHYIEA + KA++
Sbjct: 830 ECYCKGNAFMKAVELARLAFPVEVVRLEEAWGDHLVQQKQLDAAINHYIEARCSIKAIEA 889
Query: 994 SIKAKQWKKAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMY 1053
++ A+QWKKA+ IL + ++ +++ +AQH+ ++++Y+ AE++Y+ D + +DMY
Sbjct: 890 ALGARQWKKAIYILD-LQDRNTASKYYPRVAQHYASLQEYEIAEELYTKGDRTKDAIDMY 948
Query: 1054 HQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISMFK 1113
Q G+WE+A+ +A + + ++ +I + +++E++ K++EAERLY+ + EPDLAI+MFK
Sbjct: 949 TQAGRWEQAHKLAMKCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVEEPDLAITMFK 1008
Query: 1114 NQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMYRSL 1173
+ Y++MI+LV + +E E ++AE +YL+ EWK + MYRS
Sbjct: 1009 KHKLYDDMIRLVGKHHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAQEWKATVNMYRSS 1068
Query: 1174 NLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQFDF 1233
LWE+AYR+A ++GG A + V YLWAKSLGG++AVRLLN+L LLE+ I +A D F+F
Sbjct: 1069 GLWEEAYRVAKAHGGANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEATIDHAADNCSFEF 1128
Query: 1234 AFELAKIGMKSKLEEVHYKYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAE 1293
AFEL+++ K K E+H KYA+ LED G+F EAE +FI+A KPKEA+ M++HNQDWE A+
Sbjct: 1129 AFELSRLAFKHKAPEIHLKYAMYLEDEGKFEEAEAEFIRAGKPKEAVLMFVHNQDWEAAQ 1188
Query: 1294 RIANEHDPTSIGDILLNQSKCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDALRV 1353
R+A HDP S+ ++L+ Q++ E ++F K E LLLRA + L + YK +W+DALR+
Sbjct: 1189 RVAEAHDPDSVAEVLVGQARGALEEKDFQKAEGLLLRAQRPGLALNYYKEAGLWSDALRI 1248
Query: 1354 CGEYVPSKLPLLQQEYEKEINTNISKDIHSLITQARQWEQNGEFYNAVECYLKIKNVDVN 1413
C +YVP +L LQ+EYE+E + + L+ QARQWEQ GE+ AV+CYLK+++ +
Sbjct: 1249 CKDYVPGQLEALQEEYEREATKKGGRGVEGLVEQARQWEQAGEYSRAVDCYLKVRDSGSS 1308
Query: 1414 -LMVKILNEVTQLTLKYLNHDQSYKILPSLVPKLMEFKQYDLAVRVYLNIDMVKEAVDIF 1472
LM K + +L++K+L +S +++ + P+L+ ++ A +YLN+D+VKEA+D F
Sbjct: 1309 GLMEKCWMKAAELSIKFLPPQRSLEVVRVVGPQLIGIGKHSAAAELYLNLDLVKEAIDAF 1368
Query: 1473 IYTQNWNKARKLCAELKPEYLSYVENQYKEWLKKNGDADMLSEIDINTALDMLMKQGQWN 1532
I + WNKA+++ EL P Y YV+ YKE+LK G D L +D+ ALD+ ++QGQW+
Sbjct: 1369 IEGEEWNKAKRVAKELDPRYEDYVDQHYKEFLKNQGKVDSLVGVDVVAALDLYVEQGQWD 1428
Query: 1533 QCLDKAKNINTNLLHKYMALYAMHLIKNKEYAQLTQLFNEYGTPNIPQFYNIYKQT-AYC 1591
+C++ A N +LHKY+ALYA HLI+ YAQ L+ ++G P PQ +NIYK+
Sbjct: 1429 KCIETATKQNYKILHKYVALYATHLIREGGYAQALALYVQHGAPANPQNFNIYKRIFTDM 1488
Query: 1592 ILNDSNENVNLIIS---LRNMLFNVIKNQNNNEE 1622
+ + N S LR++LFN+ +N + E
Sbjct: 1489 VSSPGTNNAEAYHSWADLRDVLFNLCENLVKSSE 1522
Score = 1162 (414.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 211/375 (56%), Positives = 283/375 (75%)
Query: 43 GRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
GRKSY+VKG+AFSPDSTK+A+ Q+DNII++YK+G+DWGDKKVICNKFIQ VT + W A
Sbjct: 63 GRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQWPA 122
Query: 103 DGPIIYGQSDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVT 162
+ I++G ++GK++ A+ K NK+ T+Y + S+VVAL N G G+LSGHADG+IVRY+
Sbjct: 123 EYVIVFGLAEGKVRLANTKTNKSSTIYGTESYVVALTTNCSGKGILSGHADGTIVRYFFD 182
Query: 163 EDASNFDQQQGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYK 222
++ S + QG++V HP PPYAL+W I+AAG DR + Y +G V + FDY+ +
Sbjct: 183 DEGSG--ESQGKLVNHPCPPYALAWATNSIVAAGCDRRIVAYGKEGHVLQTFDYSRDP-Q 239
Query: 223 EREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGS 282
EREFT A +SP GQ+VV+GSYD +++F WSP +S+WEE K I NLYT++AL+WKRDGS
Sbjct: 240 EREFTTAAASPGGQSVVLGSYDRLRVFNWSPRRSIWEEAKPKEIANLYTVTALAWKRDGS 299
Query: 283 RIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYE 342
R+ G LCG VE F+ L+R+I+K KFE+ YV PSQV+VK LS G V+LKS YGYE
Sbjct: 300 RLCAGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYE 356
Query: 343 ITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGE 402
+ +V I+G +RYLVA T DTLLLGDL+ N LSE+ W SG NEK++F+N VC++FNAGE
Sbjct: 357 VEEVKILGKERYLVAHTSDTLLLGDLNTNRLSEIAWQGSGGNEKYFFENENVCMIFNAGE 416
Query: 403 LSIIEYGNNEILTCV 417
L+++EYG+N+ L V
Sbjct: 417 LTLVEYGSNDSLGSV 431
Score = 358 (131.1 bits), Expect = 2.0e-303, Sum P(2) = 2.0e-303
Identities = 75/156 (48%), Positives = 101/156 (64%)
Query: 419 IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIW 478
+++F WSP +S+WEE K I NLYT++AL+WKRDGSR+ G LCG VE F+ L+R+I+
Sbjct: 263 LRVFNWSPRRSIWEEAKPKEIANLYTVTALAWKRDGSRLCAGTLCGGVEQFDCCLRRSIY 322
Query: 479 KGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTLLTEFM 538
K KFE+ YV PSQV+VK LS G V+LKS YGYE+ +V I+G +RYLVA T T +
Sbjct: 323 KNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYEVEEVKILGKERYLVAHTSDTLLL 379
Query: 539 NPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
L + RL+E S K Y + +C+I
Sbjct: 380 GD-LNTNRLSEIAWQGSGGNEK---YFFENENVCMI 411
>UNIPROTKB|E2RF25 [details] [associations]
symbol:IFT172 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0016485 "protein processing" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0007368
"determination of left/right symmetry" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] [GO:0001841 "neural tube formation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005929
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0007368 GO:GO:0042384
GO:GO:0009953 GO:GO:0016485 GO:GO:0007224 GO:GO:0001841 OMA:MAFIFLN
CTD:26160 GeneTree:ENSGT00440000033648 EMBL:AAEX03010804
RefSeq:XP_540128.2 ProteinModelPortal:E2RF25
Ensembl:ENSCAFT00000008224 GeneID:483013 KEGG:cfa:483013
NextBio:20857476 Uniprot:E2RF25
Length = 1749
Score = 2577 (912.2 bits), Expect = 0., Sum P(2) = 0.
Identities = 485/1116 (43%), Positives = 744/1116 (66%)
Query: 515 EITDVAIMGNDRYLVARTLLTEFMNPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
E+T V ND RT EFMNPHLISVR+NER+Q ++NKKLAYL+D+ TI ++
Sbjct: 416 ELTLVEYGSNDTLGSVRT---EFMNPHLISVRINERRQ-RGMEDNKKLAYLVDIKTIAIV 471
Query: 575 DLITNLPTLHINHDSKIDWLELNETAHKLLYRDKKMRLTLLDIRTSEKHNILNYCTFVQW 634
DLI I+HDS++DWLELNET HKLL+RD+K+RL L DI + K ILN+C++VQW
Sbjct: 472 DLIGGYNIGTISHDSRVDWLELNETGHKLLFRDRKLRLHLYDIESCTKTMILNFCSYVQW 531
Query: 635 LPGSDVVVAQSRHNACVWYNIDTPDRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYE 694
+PGSDV+VAQ+R++ CVWYNI+ P+R+T +RGD+I + R G++E++ +G + Y
Sbjct: 532 VPGSDVLVAQNRNSLCVWYNIEAPERVTMSSIRGDVIGLERGGGKTEVMVTEGVTTVAYT 591
Query: 695 LDESLIEFGTAVHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEICYAA 754
LDE LIEFGTA+ D ++ +A +LE+L + E E MW+ L+++A++ LH+AE C++A
Sbjct: 592 LDEGLIEFGTAIDDGNYTRATAFLETLEMTP-ETEAMWKTLSKLALEARQLHIAERCFSA 650
Query: 755 LGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENNEIH 814
LG ++ FL ET +I + S+E G+ ++ AR+A+L K +K+AE I+LE N +
Sbjct: 651 LGHVAKARFLHETNEIADQVSREYG-GEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVE 709
Query: 815 KAIDMYLKLYKWEDALSLAETNNYEYNE-LKKKYIKWLTDTRQEDKAGELYEKEGDHQTA 873
+A+DMY +L++W++ +++A+ + E L++ Y +WL DT+QE++AGEL E +GD A
Sbjct: 710 EAMDMYQELHRWDECIAVAQAKGHPALEKLRRGYYQWLMDTQQEERAGELQESQGDGLAA 769
Query: 874 LNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVKGLIKNESYIKAGQIYEFTNENEKAL 933
++ YLKA +KA LV LL N ++V I L+K E Y +AG ++E ++AL
Sbjct: 770 ISLYLKAGLPAKAARLVLAREELLANTELVEHITAALVKGELYERAGDLFEKIQNPQRAL 829
Query: 934 ECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAAINHYIEAGKNNKALDT 993
ECY KG + K ++L R P V LEE WGDHL++ KQ +AAINHYIEA + KA++
Sbjct: 830 ECYCKGNAFMKAVELARLAFPVEVVRLEEAWGDHLVQQKQLDAAINHYIEARCSIKAIEA 889
Query: 994 SIKAKQWKKAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMY 1053
++ A+QWKKA+ IL + ++ +++ +AQH+ ++++Y+ AE++Y D + +DMY
Sbjct: 890 ALGARQWKKAIYILD-LQDQNTASKYYPRVAQHYASLQEYEIAEELYIKGDQTKDAIDMY 948
Query: 1054 HQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISMFK 1113
Q G+WE+A+ +A + + ++ +I + +++E++ K++EAERLY+ + EPDLAI+MFK
Sbjct: 949 TQAGRWEQAHKLAVKCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVEEPDLAITMFK 1008
Query: 1114 NQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMYRSL 1173
+ YE+MI+LV + +E E ++AE +YL+ EWK + MYRS
Sbjct: 1009 KHKLYEDMIRLVGKHHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAQEWKATVNMYRSS 1068
Query: 1174 NLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQFDF 1233
LWE+AYR+A ++G A + V YLWAKSLGG+SAVRLLN+L LLE+ I +A D F+F
Sbjct: 1069 GLWEEAYRVAKAHGEANAHKHVAYLWAKSLGGESAVRLLNKLGLLEAAIDHAADNCSFEF 1128
Query: 1234 AFELAKIGMKSKLEEVHYKYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAE 1293
AFEL+++ +K K E+H +YA+ LED G+F EAE +FI+A KPKEA+ M+ HNQDWE A+
Sbjct: 1129 AFELSRLALKHKTPEIHLRYAMYLEDEGKFEEAEAEFIRAGKPKEAVLMFFHNQDWEAAQ 1188
Query: 1294 RIANEHDPTSIGDILLNQSKCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDALRV 1353
R+A HDP S+ ++LL Q++ E ++F K E LLLRA + L + YK +W+DALR+
Sbjct: 1189 RVAEAHDPDSVAEVLLRQAREALEEKDFQKAEGLLLRAQRPGLALNYYKEAGLWSDALRI 1248
Query: 1354 CGEYVPSKLPLLQQEYEKEINTNISKDIHSLITQARQWEQNGEFYNAVECYLKIKNVDV- 1412
C +YVP +L LQ+EYE+E ++ + L+ QARQWEQ GE+ AV+CYLK+++
Sbjct: 1249 CKDYVPGQLEALQEEYEREATKKGARGLEGLVEQARQWEQAGEYGRAVDCYLKVRDSSSG 1308
Query: 1413 NLMVKILNEVTQLTLKYLNHDQSYKILPSLVPKLMEFKQYDLAVRVYLNIDMVKEAVDIF 1472
+LM K + +L +K+L +S +++ ++ P+L+ ++ A +YLN+D+VKEA+D F
Sbjct: 1309 SLMEKCWMKAAELAIKFLPPQRSLEVVQAVGPQLIGIGKHSAAAELYLNLDLVKEAIDAF 1368
Query: 1473 IYTQNWNKARKLCAELKPEYLSYVENQYKEWLKKNGDADMLSEIDINTALDMLMKQGQWN 1532
I + WNKA+++ EL P Y YV+ YKE+LK G D L +D+ ALD+ ++QGQW+
Sbjct: 1369 IEGEEWNKAKRVAKELDPRYEDYVDQHYKEFLKNQGKVDSLVGVDVVAALDLYVEQGQWD 1428
Query: 1533 QCLDKAKNINTNLLHKYMALYAMHLIKNKEYAQLTQLFNEYGTPNIPQFYNIYKQTAYCI 1592
+C++ A N +LHKY+ALYA HLI+ Y Q L+ ++G P PQ +NIYK+ +
Sbjct: 1429 KCIETATKQNYKILHKYVALYATHLIREGGYGQALALYVQHGAPANPQNFNIYKRIFTDM 1488
Query: 1593 LN----DSNENVNLIISLRNMLFNVIKNQNNNEEID 1624
++ +S E + LR++LFN+ +N + E++
Sbjct: 1489 VSSPGTNSAEAYHNWADLRDVLFNLCENLVKSSEVN 1524
Score = 1156 (412.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 211/375 (56%), Positives = 282/375 (75%)
Query: 43 GRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
GRKSY+VKG+AFSPDSTK+A+ Q+DNII++YK+G+DWGDKKVICNKFIQ VT + W A
Sbjct: 63 GRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQWPA 122
Query: 103 DGPIIYGQSDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVT 162
+ I++G ++GK++ A+ K NK+ T+Y ++S+VV+L N G G+LSGHADG+IVRY+
Sbjct: 123 EHIIVFGLAEGKVRLANTKTNKSSTIYGTDSYVVSLTTNCSGKGILSGHADGTIVRYFFD 182
Query: 163 EDASNFDQQQGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYK 222
++ S + QG++V HP PPYAL+W I+AAG DR + Y +G V + FDY+
Sbjct: 183 DEGSG--ESQGKLVNHPCPPYALAWATNSIVAAGCDRRIVAYGKEGHVLQTFDYSRDP-N 239
Query: 223 EREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGS 282
EREFT A +SP GQ+VV+GSYD +++ WSP +SVWEE K I NLYT++AL+WKRDGS
Sbjct: 240 EREFTTAAASPGGQSVVLGSYDRLRVLNWSPRRSVWEEAKPKEIANLYTVTALAWKRDGS 299
Query: 283 RIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYE 342
R+ G LCG VE F+ L+R+I+K KFE+ YV PSQV+VK LS G V+LKS YGYE
Sbjct: 300 RLCAGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYE 356
Query: 343 ITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGE 402
+ +V I+G +RYLVA T DTLLLGDL+ N LSEV W SG NEK++F+N VC++FNAGE
Sbjct: 357 VEEVKILGKERYLVAHTSDTLLLGDLNTNRLSEVAWQGSGGNEKYFFENENVCMIFNAGE 416
Query: 403 LSIIEYGNNEILTCV 417
L+++EYG+N+ L V
Sbjct: 417 LTLVEYGSNDTLGSV 431
Score = 354 (129.7 bits), Expect = 6.8e-303, Sum P(2) = 6.8e-303
Identities = 75/156 (48%), Positives = 100/156 (64%)
Query: 419 IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIW 478
+++ WSP +SVWEE K I NLYT++AL+WKRDGSR+ G LCG VE F+ L+R+I+
Sbjct: 263 LRVLNWSPRRSVWEEAKPKEIANLYTVTALAWKRDGSRLCAGTLCGGVEQFDCCLRRSIY 322
Query: 479 KGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTLLTEFM 538
K KFE+ YV PSQV+VK LS G V+LKS YGYE+ +V I+G +RYLVA T T +
Sbjct: 323 KNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYEVEEVKILGKERYLVAHTSDTLLL 379
Query: 539 NPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
L + RL+E V Q Y + +C+I
Sbjct: 380 GD-LNTNRLSE---VAWQGSGGNEKYFFENENVCMI 411
Score = 50 (22.7 bits), Expect = 1.6e-115, Sum P(2) = 1.6e-115
Identities = 43/197 (21%), Positives = 79/197 (40%)
Query: 1150 YKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIA--LSNGGQEAVEPVVYLWAKSLGG-D 1206
+ A + YL+ + K AI + W A R+A L ++ V+ + K+ G D
Sbjct: 1348 HSAAAELYLNLDLVKEAIDAFIEGEEWNKAKRVAKELDPRYEDYVDQHYKEFLKNQGKVD 1407
Query: 1207 SAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFNEA 1266
S V + + ++ L+ + Q+D E A L + YA L G + +A
Sbjct: 1408 SLVGV-DVVAALDLYVEQG----QWDKCIETATKQNYKILHKYVALYATHLIREGGYGQA 1462
Query: 1267 ETQFIKANKPKEAISMYIHNQDWEN--AERIANE----HDPTSIGDILLNQSK-----CE 1315
+++ P + I+ + + + + N H+ + D+L N + E
Sbjct: 1463 LALYVQHGAPANPQNFNIYKRIFTDMVSSPGTNSAEAYHNWADLRDVLFNLCENLVKSSE 1522
Query: 1316 FENENFSKFETLLLRAH 1332
+FET+LL AH
Sbjct: 1523 VNTPAHEEFETMLLIAH 1539
>UNIPROTKB|I3LPC6 [details] [associations]
symbol:IFT172 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0016485
"protein processing" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0007368 "determination of
left/right symmetry" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0005929 "cilium" evidence=IEA]
[GO:0001841 "neural tube formation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005929
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0007368 GO:GO:0042384
GO:GO:0009953 GO:GO:0016485 GO:GO:0007224 GO:GO:0001841 OMA:MAFIFLN
GeneTree:ENSGT00440000033648 EMBL:FP476009 RefSeq:XP_003354937.1
Ensembl:ENSSSCT00000028161 GeneID:100625100 KEGG:ssc:100625100
Uniprot:I3LPC6
Length = 1749
Score = 2575 (911.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 484/1114 (43%), Positives = 748/1114 (67%)
Query: 515 EITDVAIMGNDRYLVARTLLTEFMNPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
E+T V ND RT EFMNPHLISVR+NER+Q ++NKKLAYL+D+ TI ++
Sbjct: 416 ELTLVEYGSNDPLGSVRT---EFMNPHLISVRINERRQ-RGMEDNKKLAYLVDIKTIAIV 471
Query: 575 DLITNLPTLHINHDSKIDWLELNETAHKLLYRDKKMRLTLLDIRTSEKHNILNYCTFVQW 634
DLI I+H+S++DWLELNET HKLL+RD+K+RL L DI + K ILN+C++VQW
Sbjct: 472 DLIGGYNIGTISHESRVDWLELNETGHKLLFRDRKLRLHLYDIESCSKTMILNFCSYVQW 531
Query: 635 LPGSDVVVAQSRHNACVWYNIDTPDRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYE 694
+PGSDV+VAQ+R++ CVWYNI+ P+R+T +RGD++ + R G++E++ +G + Y
Sbjct: 532 VPGSDVLVAQNRNSLCVWYNIEAPERVTMSSIRGDVVGLERGGGKTEVMVTEGVTTVAYT 591
Query: 695 LDESLIEFGTAVHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEICYAA 754
LDE L+EFGTAV D D+ +A +LE+L + E E MW+ L++++++ LH+AE C++A
Sbjct: 592 LDEGLVEFGTAVDDGDYMRATTFLETLEMTP-ETEAMWKTLSKLSLEAKQLHIAERCFSA 650
Query: 755 LGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENNEIH 814
LG ++ FLRET +I + S+E G+ ++ AR+A+L K +K+AE I+LE N +
Sbjct: 651 LGHVAKARFLRETNEIADQVSQEYG-GEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVE 709
Query: 815 KAIDMYLKLYKWEDALSLAETNNYEYNE-LKKKYIKWLTDTRQEDKAGELYEKEGDHQTA 873
+A+ MY +L++W++ +++AE + E L++ Y +WL DT+QE++AGEL E +GD A
Sbjct: 710 EAMAMYQELHRWDECIAVAEAKGHPALENLRRGYYQWLMDTQQEERAGELQESQGDGLAA 769
Query: 874 LNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVKGLIKNESYIKAGQIYEFTNENEKAL 933
++ YLKA +KA LV LL N D+V +I LIK E Y +AG ++E ++AL
Sbjct: 770 ISLYLKAGLPAKAARLVLTREELLANTDLVERITAALIKGELYERAGDLFEKIRNPQQAL 829
Query: 934 ECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAAINHYIEAGKNNKALDT 993
ECY KG + K ++L R P V LEE WGDHL++ KQ +AAINHYIEA + KA++
Sbjct: 830 ECYCKGNAFMKAVELARSAFPVEVVRLEEAWGDHLVQQKQLDAAINHYIEARCSIKAIEA 889
Query: 994 SIKAKQWKKAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMY 1053
++ A+QWKKA+ IL + ++ A++ +AQH+ ++++Y+ AE++Y+ D + +DMY
Sbjct: 890 ALGARQWKKAIYILD-LQDRTIAAKYYPRVAQHYASLQEYEIAEELYTKGDRTKDAIDMY 948
Query: 1054 HQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISMFK 1113
Q G+WE+A+ +A + + ++ A +I + +++E++ K++EAERLY+ + EPDLAI+MFK
Sbjct: 949 TQAGRWEQAHKLAMKCMRPEDVSALYITQAQEMEKQGKYREAERLYVTVEEPDLAITMFK 1008
Query: 1114 NQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMYRSL 1173
+ Y++MI+LV + +E E ++AE +YL+ EWK + MYRS
Sbjct: 1009 KHKLYDDMIRLVGKHHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAEEWKATVNMYRSS 1068
Query: 1174 NLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQFDF 1233
LWE+AYR+A ++GG A + V YLWAKSLGG++AVRLLN+L LLE+ I +A D F+F
Sbjct: 1069 GLWEEAYRVAKAHGGANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEAAIDHAADNCSFEF 1128
Query: 1234 AFELAKIGMKSKLEEVHYKYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAE 1293
AFEL+++ +K K E+H +YA+ LED G+F EAE +FI+A KPKEA+ M++HNQDWE A+
Sbjct: 1129 AFELSRLALKHKTPEIHLRYAMYLEDEGKFEEAEAEFIRAGKPKEAVLMFVHNQDWEAAQ 1188
Query: 1294 RIANEHDPTSIGDILLNQSKCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDALRV 1353
R+A HDP S+ ++L+ Q++ E ++F K E LLLRA + L + YK +W+DALR+
Sbjct: 1189 RVAEAHDPESVAEVLVGQARGALEEKDFQKAEGLLLRAQRPGLALTFYKEAGLWSDALRI 1248
Query: 1354 CGEYVPSKLPLLQQEYEKEINTNISKDIHSLITQARQWEQNGEFYNAVECYLKIKNVDVN 1413
C +YVP +L LQ+EYE+E ++ + L+ QARQWEQ GEF AV CYLK+++ +
Sbjct: 1249 CKDYVPGQLEALQEEYEREATKKGARGMEGLVEQARQWEQAGEFSRAVYCYLKVRDAGSS 1308
Query: 1414 -LMVKILNEVTQLTLKYLNHDQSYKILPSLVPKLMEFKQYDLAVRVYLNIDMVKEAVDIF 1472
L+ K + +L++K+L ++ +++ ++ P+L+ ++ A +YLN+D+VKEA+D F
Sbjct: 1309 GLVEKCWMKAAELSIKFLPPQRALEVVRAVGPQLVGIGKHSAAAELYLNLDLVKEAIDAF 1368
Query: 1473 IYTQNWNKARKLCAELKPEYLSYVENQYKEWLKKNGDADMLSEIDINTALDMLMKQGQWN 1532
+ + WNKA+ + EL P Y YV+ +YK++LK G D L +D+ ALD+ ++QGQW+
Sbjct: 1369 MEGEEWNKAKHVAKELDPRYEDYVDQRYKDFLKNQGKVDSLVGVDVVAALDLYVEQGQWD 1428
Query: 1533 QCLDKAKNINTNLLHKYMALYAMHLIKNKEYAQLTQLFNEYGTPNIPQFYNIYKQTAYCI 1592
+C++ A N +LHKY+ALYA HLI+ YAQ L+ ++G P PQ +NIYK+ +
Sbjct: 1429 KCIETATKQNYKILHKYVALYATHLIREGGYAQALALYVQHGAPANPQNFNIYKRIFTDM 1488
Query: 1593 LN----DSNENVNLIISLRNMLFNVIKNQNNNEE 1622
++ +S E + LR++LFN+ +N + E
Sbjct: 1489 VSSPGTNSAEAYHSWADLRDVLFNLCENLAKSSE 1522
Score = 1149 (409.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 210/375 (56%), Positives = 282/375 (75%)
Query: 43 GRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
GRKSY+VKG+AFSPDSTK+A+ Q+DNII++YK+G+DWGDKKVICNKFIQ VT + W A
Sbjct: 63 GRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQWPA 122
Query: 103 DGPIIYGQSDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVT 162
+ I++G ++GK++ A+ K NK+ T+Y ++S+VV+L N G G+LSGHADG+IVRY+
Sbjct: 123 EFIIVFGLAEGKVRLANTKTNKSSTIYGTDSYVVSLTTNCSGKGILSGHADGTIVRYFFD 182
Query: 163 EDASNFDQQQGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYK 222
++ S + QG++V HP PPYAL+W I+AAG DR + Y +G V + FDY+ +
Sbjct: 183 DEGSG--ESQGKLVNHPCPPYALAWATNSIVAAGCDRRIVAYGREGHVLQTFDYSRDP-Q 239
Query: 223 EREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGS 282
EREFT A +SP GQ+VV+GSYD +++ WSP +S+WEE K I NLYT++AL+WKRDGS
Sbjct: 240 EREFTTAAASPGGQSVVLGSYDRLRVLNWSPRRSIWEEAKPKEIANLYTVTALAWKRDGS 299
Query: 283 RIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYE 342
R+ G LCG VE F+ L+R+I+K KFE+ YV PSQV+VK LS G V+LKS YGYE
Sbjct: 300 RLCAGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYE 356
Query: 343 ITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGE 402
+ +V I+G +RYLVA T DTLLLGDL N LSEV W SG NEK++F+N VC++FNAGE
Sbjct: 357 VEEVKILGKERYLVAHTSDTLLLGDLATNRLSEVAWQGSGGNEKYFFENENVCMIFNAGE 416
Query: 403 LSIIEYGNNEILTCV 417
L+++EYG+N+ L V
Sbjct: 417 LTLVEYGSNDPLGSV 431
Score = 355 (130.0 bits), Expect = 8.6e-303, Sum P(2) = 8.6e-303
Identities = 74/156 (47%), Positives = 100/156 (64%)
Query: 419 IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIW 478
+++ WSP +S+WEE K I NLYT++AL+WKRDGSR+ G LCG VE F+ L+R+I+
Sbjct: 263 LRVLNWSPRRSIWEEAKPKEIANLYTVTALAWKRDGSRLCAGTLCGGVEQFDCCLRRSIY 322
Query: 479 KGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTLLTEFM 538
K KFE+ YV PSQV+VK LS G V+LKS YGYE+ +V I+G +RYLVA T T +
Sbjct: 323 KNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYEVEEVKILGKERYLVAHTSDTLLL 379
Query: 539 NPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
L + RL+E V Q Y + +C+I
Sbjct: 380 GD-LATNRLSE---VAWQGSGGNEKYFFENENVCMI 411
Score = 44 (20.5 bits), Expect = 5.8e-114, Sum P(2) = 5.8e-114
Identities = 42/197 (21%), Positives = 77/197 (39%)
Query: 1150 YKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIA--LSNGGQEAVEPVVYLWAKSLGG-D 1206
+ A + YL+ + K AI + W A +A L ++ V+ + K+ G D
Sbjct: 1348 HSAAAELYLNLDLVKEAIDAFMEGEEWNKAKHVAKELDPRYEDYVDQRYKDFLKNQGKVD 1407
Query: 1207 SAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFNEA 1266
S V + + ++ L+ + Q+D E A L + YA L G + +A
Sbjct: 1408 SLVGV-DVVAALDLYVEQG----QWDKCIETATKQNYKILHKYVALYATHLIREGGYAQA 1462
Query: 1267 ETQFIKANKPKEAISMYIHNQDWEN--AERIANE----HDPTSIGDILLN-----QSKCE 1315
+++ P + I+ + + + + N H + D+L N E
Sbjct: 1463 LALYVQHGAPANPQNFNIYKRIFTDMVSSPGTNSAEAYHSWADLRDVLFNLCENLAKSSE 1522
Query: 1316 FENENFSKFETLLLRAH 1332
+ +FET+LL AH
Sbjct: 1523 ANSPAHEEFETMLLIAH 1539
>UNIPROTKB|Q9UG01 [details] [associations]
symbol:IFT172 "Intraflagellar transport protein 172
homolog" species:9606 "Homo sapiens" [GO:0001841 "neural tube
formation" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0016485 "protein processing" evidence=IEA]
[GO:0005929 "cilium" evidence=ISS] [GO:0042384 "cilium assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50005 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 EMBL:CH471053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005929 GO:GO:0007368
GO:GO:0042384 GO:GO:0009953
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0016485
GO:GO:0007224 GO:GO:0001841 EMBL:AC074117 OMA:MAFIFLN CTD:26160
eggNOG:NOG289811 HOGENOM:HOG000259226 HOVERGEN:HBG098449
OrthoDB:EOG4F4S95 EMBL:BC008024 EMBL:BC047294 EMBL:BC137126
EMBL:AL110218 EMBL:AL117421 EMBL:AB033005 IPI:IPI00410096
IPI:IPI00889747 PIR:T14758 PIR:T17224 RefSeq:NP_056477.1
UniGene:Hs.127401 ProteinModelPortal:Q9UG01 SMR:Q9UG01
IntAct:Q9UG01 STRING:Q9UG01 PhosphoSite:Q9UG01 DMDM:182662418
PaxDb:Q9UG01 PRIDE:Q9UG01 Ensembl:ENST00000260570 GeneID:26160
KEGG:hsa:26160 UCSC:uc002rku.3 GeneCards:GC02M027667
H-InvDB:HIX0001924 H-InvDB:HIX0119024 HGNC:HGNC:30391 HPA:HPA044893
MIM:607386 neXtProt:NX_Q9UG01 PharmGKB:PA142671666
InParanoid:Q9UG01 PhylomeDB:Q9UG01 ChiTaRS:IFT172 GenomeRNAi:26160
NextBio:48259 ArrayExpress:Q9UG01 Bgee:Q9UG01 CleanEx:HS_IFT172
Genevestigator:Q9UG01 Uniprot:Q9UG01
Length = 1749
Score = 2567 (908.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 479/1114 (42%), Positives = 742/1114 (66%)
Query: 515 EITDVAIMGNDRYLVARTLLTEFMNPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
E+T V ND RT EFMNPHLISVR+NER Q ++NKKLAYL+D+ TI ++
Sbjct: 416 ELTLVEYGNNDTLGSVRT---EFMNPHLISVRINERCQ-RGTEDNKKLAYLIDIKTIAIV 471
Query: 575 DLITNLPTLHINHDSKIDWLELNETAHKLLYRDKKMRLTLLDIRTSEKHNILNYCTFVQW 634
DLI ++H+S++DWLELNET HKLL+RD+K+RL L DI + K ILN+C+++QW
Sbjct: 472 DLIGGYNIGTVSHESRVDWLELNETGHKLLFRDRKLRLHLYDIESCSKTMILNFCSYMQW 531
Query: 635 LPGSDVVVAQSRHNACVWYNIDTPDRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYE 694
+PGSDV+VAQ+R++ CVWYNI+ P+R+T F +RGD+I + R G++E++ +G + Y
Sbjct: 532 VPGSDVLVAQNRNSLCVWYNIEAPERVTMFTIRGDVIGLERGGGKTEVMVMEGVTTVAYT 591
Query: 695 LDESLIEFGTAVHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEICYAA 754
LDE LIEFGTA+ D ++ +A +LE+L + E E MW+ L+++A++ LH+AE C++A
Sbjct: 592 LDEGLIEFGTAIDDGNYIRATAFLETLEMTP-ETEAMWKTLSKLALEARQLHIAERCFSA 650
Query: 755 LGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENNEIH 814
LG ++ FL ET +I + S+E G+ ++ AR+A+L K +K+AE I+LE N +
Sbjct: 651 LGQVAKARFLHETNEIADQVSREYG-GEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVE 709
Query: 815 KAIDMYLKLYKWEDALSLAETNNYEYNE-LKKKYIKWLTDTRQEDKAGELYEKEGDHQTA 873
+A+ MY +L++W++ +++AE + E L++ Y +WL DT+QE++AGEL E +GD A
Sbjct: 710 EAMGMYQELHRWDECIAVAEAKGHPALEKLRRSYYQWLMDTQQEERAGELQESQGDGLAA 769
Query: 874 LNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVKGLIKNESYIKAGQIYEFTNENEKAL 933
++ YLKA +KA LV LL N ++V I LIK E Y +AG ++E + +KAL
Sbjct: 770 ISLYLKAGLPAKAARLVLTREELLANTELVEHITAALIKGELYERAGDLFEKIHNPQKAL 829
Query: 934 ECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAAINHYIEAGKNNKALDT 993
ECYRKG + K ++L R P V LEE WGDHL++ KQ +AAINHYIEA + KA++
Sbjct: 830 ECYRKGNAFMKAVELARLAFPVEVVKLEEAWGDHLVQQKQLDAAINHYIEARCSIKAIEA 889
Query: 994 SIKAKQWKKAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMY 1053
++ A+QWKKA+ IL + ++ +++ +AQH+ ++++Y+ AE++Y+ D + +DMY
Sbjct: 890 ALGARQWKKAIYILD-LQDRNTASKYYPLVAQHYASLQEYEIAEELYTKGDRTKDAIDMY 948
Query: 1054 HQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISMFK 1113
Q G+WE+A+ +A + + ++ +I + +++E++ K++EAERLY+ + EPDLAI+M+K
Sbjct: 949 TQAGRWEQAHKLAMKCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVQEPDLAITMYK 1008
Query: 1114 NQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMYRSL 1173
+ Y++MI+LV + +E E ++AE +YL+ EWK + MYR+
Sbjct: 1009 KHKLYDDMIRLVGKHHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAQEWKATVNMYRAS 1068
Query: 1174 NLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQFDF 1233
LWE+AYR+A + GG A + V YLWAKSLGG++AVRLLN+L LLE+ + +A D F+F
Sbjct: 1069 GLWEEAYRVARTQGGANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEAAVDHAADNCSFEF 1128
Query: 1234 AFELAKIGMKSKLEEVHYKYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAE 1293
AFEL+++ +K K EVH KYA+ LED G+F EAE +FI+A KPKEA+ M++HNQDWE A+
Sbjct: 1129 AFELSRLALKHKTPEVHLKYAMFLEDEGKFEEAEAEFIRAGKPKEAVLMFVHNQDWEAAQ 1188
Query: 1294 RIANEHDPTSIGDILLNQSKCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDALRV 1353
R+A HDP S+ ++L+ Q++ E ++F K E LLLRA + L + YK +W+DALR+
Sbjct: 1189 RVAEAHDPDSVAEVLVGQARGALEEKDFQKAEGLLLRAQRPGLALNYYKEAGLWSDALRI 1248
Query: 1354 CGEYVPSKLPLLQQEYEKEINTNISKDIHSLITQARQWEQNGEFYNAVECYLKIKNV-DV 1412
C +YVPS+L LQ+EYE+E ++ + + QAR WEQ GE+ AV+CYLK+++ +
Sbjct: 1249 CKDYVPSQLEALQEEYEREATKKGARGVEGFVEQARHWEQAGEYSRAVDCYLKVRDSGNS 1308
Query: 1413 NLMVKILNEVTQLTLKYLNHDQSYKILPSLVPKLMEFKQYDLAVRVYLNIDMVKEAVDIF 1472
L K + +L++K+L ++ +++ ++ P+L+ ++ A +YLN+D+VKEA+D F
Sbjct: 1309 GLAEKCWMKAAELSIKFLPPQRNMEVVLAVGPQLIGIGKHSAAAELYLNLDLVKEAIDAF 1368
Query: 1473 IYTQNWNKARKLCAELKPEYLSYVENQYKEWLKKNGDADMLSEIDINTALDMLMKQGQWN 1532
I + WNKA+++ EL P Y YV+ YKE+LK G D L +D+ ALD+ ++QGQW+
Sbjct: 1369 IEGEEWNKAKRVAKELDPRYEDYVDQHYKEFLKNQGKVDSLVGVDVIAALDLYVEQGQWD 1428
Query: 1533 QCLDKAKNINTNLLHKYMALYAMHLIKNKEYAQLTQLFNEYGTPNIPQFYNIYKQTAYCI 1592
+C++ A N +LHKY+ALYA HLI+ AQ L+ ++G P PQ +NIYK+ +
Sbjct: 1429 KCIETATKQNYKILHKYVALYATHLIREGSSAQALALYVQHGAPANPQNFNIYKRIFTDM 1488
Query: 1593 LNDSNENV----NLIISLRNMLFNVIKNQNNNEE 1622
++ N + LR++LFN+ +N + E
Sbjct: 1489 VSSPGTNCAEAYHSWADLRDVLFNLCENLVKSSE 1522
Score = 1153 (410.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 210/375 (56%), Positives = 282/375 (75%)
Query: 43 GRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
GRKSY+VKG+AFSPDSTK+A+ Q+DNII++YK+G+DWGDKKVICNKFIQ VT + W A
Sbjct: 63 GRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQWPA 122
Query: 103 DGPIIYGQSDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVT 162
+ I++G ++GK++ A+ K NK+ T+Y + S+VV+L N G G+LSGHADG+IVRY+
Sbjct: 123 EYIIVFGLAEGKVRLANTKTNKSSTIYGTESYVVSLTTNCSGKGILSGHADGTIVRYFFD 182
Query: 163 EDASNFDQQQGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYK 222
++ S + QG++V HP PPYAL+W I+AAG DR + Y +G + + FDY+ +
Sbjct: 183 DEGSG--ESQGKLVNHPCPPYALAWATNSIVAAGCDRKIVAYGKEGHMLQTFDYSRDP-Q 239
Query: 223 EREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGS 282
EREFT A SSP GQ+VV+GSYD +++F W P +S+WEE K I NLYTI+AL+WKRDGS
Sbjct: 240 EREFTTAVSSPGGQSVVLGSYDRLRVFNWIPRRSIWEEAKPKEITNLYTITALAWKRDGS 299
Query: 283 RIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYE 342
R+ G LCG VE F+ L+R+I+K KFE+ YV PSQV+VK LS G V+LKS YGYE
Sbjct: 300 RLCVGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYE 356
Query: 343 ITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGE 402
+ +V I+G +RYLVA T +TLLLGDL+ N LSE+ W SG NEK++F+N VC++FNAGE
Sbjct: 357 VEEVKILGKERYLVAHTSETLLLGDLNTNRLSEIAWQGSGGNEKYFFENENVCMIFNAGE 416
Query: 403 LSIIEYGNNEILTCV 417
L+++EYGNN+ L V
Sbjct: 417 LTLVEYGNNDTLGSV 431
Score = 353 (129.3 bits), Expect = 9.9e-302, Sum P(2) = 9.9e-302
Identities = 75/156 (48%), Positives = 100/156 (64%)
Query: 419 IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIW 478
+++F W P +S+WEE K I NLYTI+AL+WKRDGSR+ G LCG VE F+ L+R+I+
Sbjct: 263 LRVFNWIPRRSIWEEAKPKEITNLYTITALAWKRDGSRLCVGTLCGGVEQFDCCLRRSIY 322
Query: 479 KGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTLLTEFM 538
K KFE+ YV PSQV+VK LS G V+LKS YGYE+ +V I+G +RYLVA T T +
Sbjct: 323 KNKFELTYVGPSQVIVKNLSS---GTRVVLKSHYGYEVEEVKILGKERYLVAHTSETLLL 379
Query: 539 NPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
L + RL+E S K Y + +C+I
Sbjct: 380 GD-LNTNRLSEIAWQGSGGNEK---YFFENENVCMI 411
>RGD|620744 [details] [associations]
symbol:Ift172 "intraflagellar transport 172 homolog
(Chlamydomonas)" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0001841 "neural tube formation"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005929
"cilium" evidence=ISO;ISS] [GO:0007224 "smoothened signaling
pathway" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007368 "determination of left/right
symmetry" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=IDA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISO] [GO:0016485 "protein processing" evidence=ISO]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=ISO] [GO:0042384 "cilium assembly" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
PROSITE:PS50005 PROSITE:PS50082 PROSITE:PS50293 PROSITE:PS50294
SMART:SM00320 RGD:620744 GO:GO:0007275 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005929
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0000122 GO:GO:0042384
GO:GO:0008134 CTD:26160 HOVERGEN:HBG098449 EMBL:AF226993
IPI:IPI00203078 RefSeq:NP_446244.1 UniGene:Rn.171849
ProteinModelPortal:Q9JKU3 GeneID:116475 KEGG:rno:116475
NextBio:619036 Genevestigator:Q9JKU3 Uniprot:Q9JKU3
Length = 1749
Score = 2558 (905.5 bits), Expect = 0., Sum P(2) = 0.
Identities = 482/1114 (43%), Positives = 739/1114 (66%)
Query: 515 EITDVAIMGNDRYLVARTLLTEFMNPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
E+T V ND RT EFMNPHLISVR+NER Q ++NKKLAYL+D+ TI ++
Sbjct: 416 ELTLVEYGSNDSLGSVRT---EFMNPHLISVRINERCQ-RGMEDNKKLAYLVDIKTIAIV 471
Query: 575 DLITNLPTLHINHDSKIDWLELNETAHKLLYRDKKMRLTLLDIRTSEKHNILNYCTFVQW 634
DLI I+H+S++DWLELNET HKLL+RD+K+RL L DI + K ILN+C++VQW
Sbjct: 472 DLIGGYNIGTISHESRVDWLELNETGHKLLFRDRKLRLHLYDIESCSKTMILNFCSYVQW 531
Query: 635 LPGSDVVVAQSRHNACVWYNIDTPDRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYE 694
+PGSDV+VAQ+R++ CVWYNI+ P+R+T +RGD++ + R G++E++ +G + Y
Sbjct: 532 VPGSDVLVAQNRNSLCVWYNIEAPERVTMSSIRGDVVGLERGGGKTEVMVTEGVTTVAYT 591
Query: 695 LDESLIEFGTAVHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEICYAA 754
LDE LIEFGTA+ D ++ +A +LE+L + E E MW+ L+++A++ LH AE C++A
Sbjct: 592 LDEGLIEFGTAIDDGNYTRATAFLETLEMTP-ETEAMWKTLSKLALEARQLHTAERCFSA 650
Query: 755 LGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENNEIH 814
LG ++ FL ET +I + S+E G+ ++ AR+A+L K +K+AE I+LE N +
Sbjct: 651 LGHVAKARFLHETNEIADQVSREYG-GEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVE 709
Query: 815 KAIDMYLKLYKWEDALSLAETNNYEYNE-LKKKYIKWLTDTRQEDKAGELYEKEGDHQTA 873
+A+DMY +L++W++ +++AE + E L++ Y + L DT+QE++AGEL E +GD A
Sbjct: 710 EAMDMYQELHRWDECIAVAEAKGHPALEKLRRDYYQRLMDTQQEERAGELQESQGDGLAA 769
Query: 874 LNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVKGLIKNESYIKAGQIYEFTNENEKAL 933
++ YLKA +KA LV LL N ++V I LIK E Y +AG ++E ++AL
Sbjct: 770 ISLYLKAGLPAKAARLVLTREELLANTELVEHITTALIKGELYERAGDLFEKIRNPQRAL 829
Query: 934 ECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAAINHYIEAGKNNKALDT 993
ECY KG + K ++L R P V LEE WGDHL++ KQ +AAINHYIEA + KA++
Sbjct: 830 ECYCKGNAFMKAVELARLAFPVEVVRLEEAWGDHLVQQKQLDAAINHYIEARCSIKAIEA 889
Query: 994 SIKAKQWKKAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMY 1053
++ A+QWKKA+ IL + ++ +++ +AQH+ ++++Y+ AE++Y+ D + +DMY
Sbjct: 890 ALGARQWKKAIYILD-LQDRNTASKYYPRVAQHYASLQEYEIAEELYTKGDRTKDAIDMY 948
Query: 1054 HQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISMFK 1113
Q G+WE+A+ +A + + ++ +I + +++E++ K++EAERLY+ + EPDLAI+MFK
Sbjct: 949 TQAGRWEQAHKLAMKCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVEEPDLAITMFK 1008
Query: 1114 NQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMYRSL 1173
+ Y++MI+LV + +E E ++AE +YL+ EWK + MYRS
Sbjct: 1009 KHKLYDDMIRLVGKHHPDLLSDTHLHLGKELETEGRLQEAEYHYLEAQEWKATVNMYRSS 1068
Query: 1174 NLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQFDF 1233
LWE+AYR+A ++GG A + V YLWAKSLGG++AVRLLN+L LLE+ I +A D F+F
Sbjct: 1069 GLWEEAYRVAKAHGGANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEAAIDHAADNCSFEF 1128
Query: 1234 AFELAKIGMKSKLEEVHYKYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAE 1293
AFEL+++ +K K E+H +YA+ LED G+F EAE +FI+A KPKEA+ M++HNQDWE A+
Sbjct: 1129 AFELSRLALKHKTPEIHLRYAMYLEDEGKFEEAEAEFIRAGKPKEAVLMFVHNQDWEAAQ 1188
Query: 1294 RIANEHDPTSIGDILLNQSKCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDALRV 1353
R+A HDP S+ ++L+ Q++ E ++F K E LLLRA + L + YK +W+DALR+
Sbjct: 1189 RVAEAHDPDSVAEVLVGQARGALEEKDFQKAEGLLLRAQRPGLALNYYKEAGLWSDALRI 1248
Query: 1354 CGEYVPSKLPLLQQEYEKEINTNISKDIHSLITQARQWEQNGEFYNAVECYLKIKNVDVN 1413
C +YVP +L LQ+EYE+E + + L+ QARQWEQ GE+ AV+CYLK+++ +
Sbjct: 1249 CKDYVPGQLEALQEEYEREATKKGGRGVEGLVEQARQWEQAGEYSRAVDCYLKVRDSGSS 1308
Query: 1414 -LMVKILNEVTQLTLKYLNHDQSYKILPSLVPKLMEFKQYDLAVRVYLNIDMVKEAVDIF 1472
LM K + +L++K+L +S +++ + P+L+ ++ + +YLN+D+VKEA+D F
Sbjct: 1309 GLMEKCWMKAAELSIKFLPPQRSLEVVRVVGPQLIGIGKHSASAELYLNLDLVKEAIDAF 1368
Query: 1473 IYTQNWNKARKLCAELKPEYLSYVENQYKEWLKKNGDADMLSEIDINTALDMLMKQGQWN 1532
I + WNKA+++ EL P Y YV+ YKE+LK G D L +D+ ALD+ ++QGQW+
Sbjct: 1369 IEGEEWNKAKRVAKELDPRYEDYVDQHYKEFLKNQGKVDSLVGVDVVAALDLYVEQGQWD 1428
Query: 1533 QCLDKAKNINTNLLHKYMALYAMHLIKNKEYAQLTQLFNEYGTPNIPQFYNIYKQT-AYC 1591
+C++ A N +LHKY+ALYA HLI+ YAQ L+ ++G P PQ +NIYK+
Sbjct: 1429 KCIETATKQNYKILHKYVALYATHLIREGGYAQALALYVQHGAPANPQNFNIYKRIFTDM 1488
Query: 1592 ILNDSNENVNLIIS---LRNMLFNVIKNQNNNEE 1622
+ + N S LR++LFN+ +N + E
Sbjct: 1489 VSSPGTNNAEAYHSWADLRDVLFNLCENLVKSSE 1522
Score = 1157 (412.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 210/375 (56%), Positives = 284/375 (75%)
Query: 43 GRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
GRKSY+VKG+AFSPDSTK+A+ Q+DNII++YK+G+DWGDKKVICNKFIQ VT + W A
Sbjct: 63 GRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQWPA 122
Query: 103 DGPIIYGQSDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVT 162
+ I++G ++GK++ A+ K NK+ T+Y ++S+VVAL N G G+LSGHADG+IVRY+
Sbjct: 123 EYIIVFGLAEGKVRLANTKTNKSSTIYGTDSYVVALTTNCSGKGILSGHADGTIVRYFFD 182
Query: 163 EDASNFDQQQGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYK 222
++ S + QG++V HP PPYAL+W I+AAG DR + Y +G V + FDY+ +
Sbjct: 183 DEGSG--ESQGKLVNHPCPPYALAWATNSIVAAGCDRRIVAYGKEGHVLQTFDYSRDP-Q 239
Query: 223 EREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGS 282
EREFT A +SP GQ+VV+GSYD +++F WSP +S+WEE K I NLYT++AL+WKRDGS
Sbjct: 240 EREFTTAAASPGGQSVVLGSYDRLRVFNWSPRRSIWEEAKPKEIANLYTVTALAWKRDGS 299
Query: 283 RIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYE 342
R+ G LCG VE F+ L+R+I+K KFE+ YV PSQ++VK LS G V+LKS YGYE
Sbjct: 300 RLCAGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQLIVKNLSS---GTRVVLKSHYGYE 356
Query: 343 ITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGE 402
+ +V I+G +RYLVA T DTLLLGDL+ N LSE+ W SG NEK++F+N VC++FNAGE
Sbjct: 357 VEEVKILGKERYLVAHTSDTLLLGDLNTNRLSEIPWQGSGGNEKYFFENENVCMIFNAGE 416
Query: 403 LSIIEYGNNEILTCV 417
L+++EYG+N+ L V
Sbjct: 417 LTLVEYGSNDSLGSV 431
Score = 355 (130.0 bits), Expect = 5.4e-301, Sum P(2) = 5.4e-301
Identities = 74/156 (47%), Positives = 101/156 (64%)
Query: 419 IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIW 478
+++F WSP +S+WEE K I NLYT++AL+WKRDGSR+ G LCG VE F+ L+R+I+
Sbjct: 263 LRVFNWSPRRSIWEEAKPKEIANLYTVTALAWKRDGSRLCAGTLCGGVEQFDCCLRRSIY 322
Query: 479 KGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTLLTEFM 538
K KFE+ YV PSQ++VK LS G V+LKS YGYE+ +V I+G +RYLVA T T +
Sbjct: 323 KNKFELTYVGPSQLIVKNLSS---GTRVVLKSHYGYEVEEVKILGKERYLVAHTSDTLLL 379
Query: 539 NPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVI 574
L + RL+E S K Y + +C+I
Sbjct: 380 GD-LNTNRLSEIPWQGSGGNEK---YFFENENVCMI 411
>FB|FBgn0035317 [details] [associations]
symbol:osm-1 "osm-1" species:7227 "Drosophila melanogaster"
[GO:0007018 "microtubule-based movement" evidence=ISS] [GO:0005871
"kinesin complex" evidence=ISS] [GO:0035058 "nonmotile primary
cilium assembly" evidence=IMP] [GO:0031513 "nonmotile primary
cilium" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=ISM;IEP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 PROSITE:PS50005 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 GO:GO:0007275 GO:GO:0005871
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005929 GO:GO:0003777 GO:GO:0007018 GO:GO:0035058 OMA:MAFIFLN
eggNOG:NOG289811 CTD:38282 RefSeq:NP_647700.1 UniGene:Dm.15839
ProteinModelPortal:Q9W040 SMR:Q9W040 IntAct:Q9W040 STRING:Q9W040
GeneID:38282 KEGG:dme:Dmel_CG13809 FlyBase:FBgn0035317
InParanoid:Q9W040 OrthoDB:EOG4DNCK6 PhylomeDB:Q9W040
GenomeRNAi:38282 NextBio:807842 Bgee:Q9W040 Uniprot:Q9W040
Length = 1772
Score = 2338 (828.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 463/1121 (41%), Positives = 714/1121 (63%)
Query: 514 YEITDVAIMGNDRYLVARTLLTEFMNPHLISVRLNERKQVHSQQENKKLAYLLDLHTICV 573
+ + +++++ + ++ TEF+NPH+ISVRLNER +ENKKLA+LLD TICV
Sbjct: 430 FNVGELSLVEYGENSILGSVRTEFVNPHVISVRLNERGNA---KENKKLAFLLDAKTICV 486
Query: 574 IDLITNLPTLHINHDSKIDWLELNETAHKLLYRDKKMRLTLLDIRTSEKHNILNYCTFVQ 633
+DLI+ + + I+H++KIDWLEL+ETAHKLL+RDKK+RL L+D T +K +L+ +FVQ
Sbjct: 487 VDLISRMTSGQISHETKIDWLELSETAHKLLFRDKKLRLILVDNYTGKKQTLLSNISFVQ 546
Query: 634 WLPGSDVVVAQSRHNACVWYNIDTPDRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGY 693
W+P SDVVVAQS N +WYNID P+ +T VRG+ I+V+RENG++ + +QDG + Y
Sbjct: 547 WVPQSDVVVAQSNSNLAIWYNIDLPEHVTMQSVRGEAIEVLRENGRTVVRSQDGPSEHNY 606
Query: 694 ELDESLIEFGTAVHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEICYA 753
+LDE L+EFGTAV+DSDFG+A+ +LESLG +K A+ MW NLA +A++ NL VA+ CYA
Sbjct: 607 QLDEGLVEFGTAVNDSDFGRAVHFLESLG-DKPAAKAMWHNLALIALEDGNLRVAQRCYA 665
Query: 754 ALGDISTTHFLRETIKIGEVWSKENNIGDP-LQCPELWARMAILNKQFKVAEGIYLENNE 812
ALG++S ++L I+ + + E + G P + CPE+ A++A+L + AE IYLE +
Sbjct: 666 ALGNVSKAYYLAGMIQQADEF--EESSGSPGILCPEVRAKLALLGSDLRTAERIYLEQGD 723
Query: 813 IHKAIDMYLKLYKWEDALSLAETNNYE-YNELKKKYIKWLTDTRQEDKAGELYEKEGDHQ 871
I A+ MY +L W++A++LAE Y ELK++++ +L + Q++KAG++ E++GD Q
Sbjct: 724 IESALKMYQQLGMWDEAVALAERRGYNRIAELKQQHMDYLLSSEQQEKAGQVLEEQGDLQ 783
Query: 872 TALNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVKGLIKNESYIKAGQIYEFTNENEK 931
A++ Y+KAN ++A L P++L++ V+ Q+ +GL+++E Y AG I + E
Sbjct: 784 QAMSLYMKANKPARAARLALKTPHILQDEQVMLQVTEGLVRSELYELAGDIAHRLSRPEA 843
Query: 932 ALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAAINHYIEAGKNNKAL 991
AL YRKG Y + +++ R + P+ VTALEEEWGD L+ KQ +A+INHYIEAG KAL
Sbjct: 844 ALALYRKGGAYARALEIGRVVAPQEVTALEEEWGDWLVSRKQLDASINHYIEAGATQKAL 903
Query: 992 DTSIKAKQWKKAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVD 1051
+ ++ AKQW+KAVQI +V+ + I ++ LA+H D AE + ++H+ ++
Sbjct: 904 EAAVGAKQWRKAVQIAKVLDEPELIQRYAVDLAKHLAFAGDLDGAEDMLVRANLHKDAIE 963
Query: 1052 MYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISM 1111
+ ++ G+WE+AY I E+HL +++ F+Q LEE+ KF++AE++ + + EPDLAI+M
Sbjct: 964 LLNRHGKWERAYLIGEKHLKAEQVRELFVQLAGTLEEQGKFRDAEKVLIAVNEPDLAIAM 1023
Query: 1112 FKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMYR 1171
+K + Y++MI+LV Y A++ E K AE +++ +WK A+ MY
Sbjct: 1024 YKRRELYDSMIRLVERYHKDLLDSTHLHLARQLESRGKLKNAEMHFVASGDWKSAVHMYC 1083
Query: 1172 SLNLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQF 1231
S WED YR+A G + A + V Y+WAKS+ + AVRLL++L LL++ + ACD+ QF
Sbjct: 1084 SSGRWEDGYRVAKLKGTEGASQQVAYMWAKSMPTEGAVRLLSKLGLLDTAVGFACDSGQF 1143
Query: 1232 DFAFELAKIGMKSKLEEVHYKYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWEN 1291
+FA EL K K +EVH K A+ LED G+F AE +F+KANKP+EAI MY H DW+
Sbjct: 1144 EFAMELCKFAGKPT-DEVHLKIAMSLEDEGKFEAAEAEFLKANKPREAILMYQHAGDWQA 1202
Query: 1292 AERIANEHDPTSIGDILLNQSKCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDAL 1351
A +A H P ++G++L+ Q+ E N+ +E LLLRAH+ DLIIE YK ++ DAL
Sbjct: 1203 ALNVAENHLPDAVGEVLIGQASAALETSNYKDYEALLLRAHRPDLIIEHYKQESLYEDAL 1262
Query: 1352 RVCGEYVPSKLP---LLQQEYEK-EINTNISKDIHSL----ITQARQWEQNGEFYNAVEC 1403
R+ E+ PS L LQ + ++ + +D S+ + +A ++ + +F A EC
Sbjct: 1263 RIAEEHYPSALNDLRRLQAQLQRGQAQAQAGEDAASISRSYLQKAAEFAKKEQFRKAAEC 1322
Query: 1404 YLKI--KNV-DVNLMVKILNEVTQLTLKYLNHDQSYKILPSLVPKLMEFKQYDLAVRVYL 1460
++I N D + + + L ++ ++L + ++ SL P+L+ KQ A ++YL
Sbjct: 1323 LMQIDSSNAEDASTLERALLRAAEICNQFLEGQDAQELAQSLGPRLLAIKQIGPAAQLYL 1382
Query: 1461 NIDMVKEAVDIFIYTQNWNKARKLCAELKPEY--LSYVENQYKEWLKKNGDADMLSEIDI 1518
DM K+AVD+FI T+ W+KAR+L E+ P+ L+YVE Q K LK G+ + L++IDI
Sbjct: 1383 AADMPKQAVDVFIKTEQWSKARRLAKEIDPDLQLLAYVEQQQKASLKHEGNIEQLADIDI 1442
Query: 1519 NTALDMLMKQGQWNQCLDKAKNINTNLLHKYMALYAMHLIKNKEYAQLTQLFNEYGTPNI 1578
+ALD+L + G+W +CL+KAK +N LL KY+A+YA LI+ L+ YG P I
Sbjct: 1443 VSALDLLAEHGEWQRCLEKAKGLNPALLQKYVAVYAAQLIREGNCTTALGLYLSYGAPPI 1502
Query: 1579 PQFYNIYKQTAY-CIL--NDSNENVNLIISLRNMLFNVIKN 1616
+NIY + A C+ + E LR+ LF ++++
Sbjct: 1503 EAHFNIYTRIALDCLALREEQTERGTTWRQLRDFLFRLLQS 1543
Score = 1089 (388.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 210/394 (53%), Positives = 280/394 (71%)
Query: 42 NGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWL 101
NG+ SYV++GLAFSPDSTKLAV QSD+I+++YKLG+ W DKKVICNKF Q VT ++WL
Sbjct: 62 NGKNSYVIRGLAFSPDSTKLAVGQSDSIVYVYKLGESWNDKKVICNKFPQASAVTALIWL 121
Query: 102 ADGPIIYGQS------------------DGKIKAAHVKANKTQTLYASNSFVVALCLNVR 143
G II G+S DGK++A H K+NK+Q+LY +S ++L N +
Sbjct: 122 TSGSIIAGKSPFPNEMNIFHQVFTTGLEDGKVRALHSKSNKSQSLYGGDSICISLAANTK 181
Query: 144 GAGVLSGHADGSIVRYYVTEDASNFDQQQGRVVQHPVPPYALSWPAGYILAAGSDRIVTI 203
G G LSGH DG+I+RY++T++A+ + GRVVQHPVPP+AL+WP G A G D+ +
Sbjct: 182 GTGFLSGHNDGTIIRYFMTDEAT---EPLGRVVQHPVPPFALAWPQGGFCAGGCDQRIVF 238
Query: 204 YESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPN 263
Y+S GR R FD++ EREFTVA SP+GQAV GS+D I++FAWSP + W E
Sbjct: 239 YDSMGRQLRTFDHSRTE-GEREFTVAACSPNGQAVAFGSFDRIRIFAWSPRQGAWSESAT 297
Query: 264 KTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKP 323
K + LYT+S+L W+RDG+R+A G + G+V LFESVL+RT+W+ KFE+I+V+PSQ+LV+
Sbjct: 298 KEVACLYTLSSLLWRRDGARLALGSVSGAVLLFESVLRRTVWQDKFELIFVAPSQLLVRS 357
Query: 324 LSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGR 383
L+ S+ + ++SQ G EI DV IMG D YLVART ++L+L DL RNL SEV W SG
Sbjct: 358 LTEPSQA--LTIESQLGLEIDDVRIMGRDNYLVARTEESLILCDLTRNLSSEVPWTASGH 415
Query: 384 NEKFYFDNVTVCLVFNAGELSIIEYGNNEILTCV 417
+E+FYF+N TVCL+FN GELS++EYG N IL V
Sbjct: 416 HERFYFENPTVCLIFNVGELSLVEYGENSILGSV 449
Score = 326 (119.8 bits), Expect = 4.5e-280, Sum P(3) = 4.5e-280
Identities = 61/114 (53%), Positives = 85/114 (74%)
Query: 419 IKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIW 478
I++FAWSP + W E K + LYT+S+L W+RDG+R+A G + G+V LFESVL+RT+W
Sbjct: 280 IRIFAWSPRQGAWSESATKEVACLYTLSSLLWRRDGARLALGSVSGAVLLFESVLRRTVW 339
Query: 479 KGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVART 532
+ KFE+I+V+PSQ+LV+ L+ S+ + ++SQ G EI DV IMG D YLVART
Sbjct: 340 QDKFELIFVAPSQLLVRSLTEPSQA--LTIESQLGLEIDDVRIMGRDNYLVART 391
Score = 69 (29.3 bits), Expect = 4.5e-280, Sum P(3) = 4.5e-280
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 49 VKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKK 83
+ GLA+SP+ +LA+A +D I +Y DD G+++
Sbjct: 19 IAGLAWSPNQQRLAIATADRHILLY---DDAGERR 50
Score = 43 (20.2 bits), Expect = 3.5e-250, Sum P(3) = 3.5e-250
Identities = 16/65 (24%), Positives = 26/65 (40%)
Query: 423 AWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGG-LCGSVELFESVLKRTIWKGK 481
+W+ K + NK P ++AL W GS IA + +F V + GK
Sbjct: 98 SWNDKKVIC----NK-FPQASAVTALIWLTSGSIIAGKSPFPNEMNIFHQVFTTGLEDGK 152
Query: 482 FEMIY 486
++
Sbjct: 153 VRALH 157
Score = 38 (18.4 bits), Expect = 1.2e-249, Sum P(3) = 1.2e-249
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 441 NLYTISALSWKRDGSRIACG 460
N Y I L++ D +++A G
Sbjct: 65 NSYVIRGLAFSPDSTKLAVG 84
Score = 37 (18.1 bits), Expect = 7.9e-106, Sum P(2) = 7.9e-106
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 656 DTPDRITQFPVRG 668
D P ++ FPVRG
Sbjct: 1708 DLPCMLSGFPVRG 1720
>UNIPROTKB|Q5DM57 [details] [associations]
symbol:IFT172 "Intraflagellar transport protein 172"
species:3055 "Chlamydomonas reinhardtii" [GO:0005932 "microtubule
basal body" evidence=IDA] [GO:0030992 "intraflagellar transport
particle B" evidence=IDA] [GO:0031514 "motile cilium" evidence=IDA]
InterPro:IPR017986 InterPro:IPR000048 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320 GO:GO:0007275
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005929 eggNOG:COG2319 GO:GO:0009434 GO:GO:0005932
GO:GO:0030992 EMBL:AY615520 EMBL:DS496120 RefSeq:XP_001691740.1
UniGene:Cre.13782 ProteinModelPortal:Q5DM57 STRING:Q5DM57
EnsemblPlants:EDP04848 GeneID:5717250 KEGG:cre:CHLREDRAFT_183240
OMA:MAFIFLN ProtClustDB:CLSN2702687 Uniprot:Q5DM57
Length = 1755
Score = 1982 (702.8 bits), Expect = 1.6e-292, Sum P(2) = 1.6e-292
Identities = 411/1119 (36%), Positives = 658/1119 (58%)
Query: 512 YGYEITDVAIMGNDRYLVARTLLTEFMNPHLISVRLNERKQVHSQQENKKLAYLLDLHTI 571
Y E+ V ND V T TE MNP+LIS + E + + S E+KKLAYL+DL T+
Sbjct: 416 YAGELHIVEYGRND---VLGTCRTEHMNPYLISAVVQEARGIAS--ESKKLAYLIDLQTV 470
Query: 572 CVIDLITNL-PTLH-INHDSKIDWLELNETAHKLLYRDKKMRLTLLDIRTSEKHNILNYC 629
+ DL+ + TL +NHD+K+DWLELN+ LL+RDKK L L + E+ +LNYC
Sbjct: 471 RIQDLMAPVGSTLATVNHDTKVDWLELNQRGTHLLFRDKKRHLHLFSLSGQERTTLLNYC 530
Query: 630 TFVQWLPGSDVVVAQSRHNACVWYNIDTPDRITQFPVRGDIIDVIRENGQSEILTQDGNH 689
+VQW+PGSDV+VAQSR+N CVWY+++ PD +T FP++G+++D+ R N ++E++ +G +
Sbjct: 531 QYVQWVPGSDVIVAQSRNNLCVWYSVNKPDNVTMFPIKGEVVDIERHNHRTEVIVDEGIN 590
Query: 690 QLGYELDESLIEFGTAVHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAE 749
+ Y LDE+LI FG A+ D D+ +A+ LE L + E E W LAE A+ + L +AE
Sbjct: 591 TVSYALDEALIYFGAALEDQDYERAVQTLEPLELTP-ETEAQWMQLAEQALATNQLVIAE 649
Query: 750 ICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLE 809
CYAALGDI+ + FL + +K + +KE GD + A MA LNKQ+ V+E + L
Sbjct: 650 RCYAALGDIAKSRFLHKVVKKAQQAAKEFG-GDGTDAWSVRAMMAQLNKQWPVSESLLLA 708
Query: 810 NNEIHKAIDMYLKLYKWEDALSLAE-TNNYEYNELKKKYIKWLTDTRQEDKAGELYEKEG 868
++ AI +Y ++WEDA+ +A+ T++ LK++Y+ WL +T QE++AG + E+EG
Sbjct: 709 QGKVDDAITLYQDNHRWEDAIRVADSTHHANAAALKQQYLTWLLETGQEEQAGAVKEREG 768
Query: 869 DHQTALNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVKGLIKNESYIKAGQIYEFTNE 928
D+ A+ YLK +A +V + + + ++ I+ L K Y +AG++YE +
Sbjct: 769 DYLAAIGLYLKGGLPGRAAQVVMSVHNVNWDPALLDSILASLAKAGLYERAGELYEHMSR 828
Query: 929 NEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAAINHYIEAGKNN 988
+ +A++ YR+G Y K IDL R+ P V +EEEWGD L+ KQ +AAINH+IE+G
Sbjct: 829 SSEAMQSYRRGHAYRKAIDLARREFPAEVIIIEEEWGDWLVTQKQMDAAINHFIESGATL 888
Query: 989 KALDTSIKAKQWKKAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQ 1048
KA+ +I +Q+ KA I++V+ + ++ + + +AQH++T + AE+ Y DM
Sbjct: 889 KAIKAAIDCRQFAKAAGIIEVL-DPREAMPYFRRIAQHYETTGALEEAERYYIRADMARD 947
Query: 1049 IVDMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDL- 1107
V+MY + G+WE A +A +L E++A + K + E +K KEAE+ YL G D+
Sbjct: 948 AVEMYSRAGKWEAAQRVARGYLTESEMRAFYRAKAAEFEAAHKLKEAEKAYLAAGGDDVD 1007
Query: 1108 -AISMFKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLA 1166
AI+M+K + Y+ MI+LV Y AQ+ E N ++AEK++++ +WK A
Sbjct: 1008 KAIAMYKRNKMYDQMIRLVTQYRKEKVPEAHTLIAQQLEVEGNLREAEKHFVEAKDWKSA 1067
Query: 1167 IKMYRSLNLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNAC 1226
++MYR +N WEDA R+A GG A + V Y WA +LGGD +LL ++ LL+ I A
Sbjct: 1068 VQMYRQVNQWEDALRVAKVYGGVNASKQVAYAWALTLGGDDGAQLLKKMGLLDHAIEYAV 1127
Query: 1227 DTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFNEAETQFIKANKPKEAISMYIHN 1286
++ F AFE+ + G K KL EVH KYA+ LED G+F EAE +FI A KPKEA MY+HN
Sbjct: 1128 ESGAFAQAFEMTRAGAKHKLPEVHLKYAMFLEDEGRFAEAEAEFISAGKPKEACDMYMHN 1187
Query: 1287 QDWENAERIANEHDPTSIGDILLNQSKCEFENENFSKFETLLLRAHKVDLIIEKYKMNHM 1346
QDW+ A RIA +DPT + +IL++Q++ E + + E L ++A + + ++ Y+ M
Sbjct: 1188 QDWDAAMRIAERYDPTMVSEILVSQARVAVERKQWLPAEGLFIKAKRPEAALKMYRDARM 1247
Query: 1347 WNDALRVCGEYVPSKLPLLQQEY---EKEINTNISKDIHSLITQARQWEQNGEFYNAVEC 1403
WNDALRV +Y+P+K+ +Q E + + ++I +AR +E+N ++ A+E
Sbjct: 1248 WNDALRVAEQYLPTKVAEVQMELLSGQGAGGGSGGASADAVINKARGFERNNDYARAIET 1307
Query: 1404 YLKIKNVDVNLMVKILN---EVTQLTLKYLNHDQSYKILPSLVPKLMEFKQYDLAVRVYL 1460
YL + D + ++ + + QL + Y H ++ ++ +L E ++ A ++
Sbjct: 1308 YLSLTAQDTSNQDQLEHCWGQAAQLAINYQRHRMK-DVVNTVSERLQEIGRHQAAGELHE 1366
Query: 1461 NIDMVKEAVDIFIYTQNWNKARKLCAELKPEYLSYVENQYKEWLKKNGDADMLSEID--- 1517
+ID + A+ + + W+KAR L A P + Y+E+QY +L +N AD L+
Sbjct: 1367 SIDDAQGAIRAYCAGRLWDKARTL-AGTNPTFSRYIEDQYNNYLLQNQQADELASRGGQH 1425
Query: 1518 INTALDMLMKQGQWNQCLDKAKNINTNLLHKYMALYAMHLIKNKEYAQLTQLFNEYGTPN 1577
A++M + + +W + + A + Y +A K +YAQ Q+F ++G
Sbjct: 1426 AQQAIEMYVARDEWAKVHELAAQQGPEVASNYALKHAERRFKQGDYAQAAQVFAQHGITA 1485
Query: 1578 IPQFYNIYKQTAYCILNDSNENVNLII--SLRNMLFNVI 1614
PQ++ +YK A +L+ S + N + SLR+M++ ++
Sbjct: 1486 QPQYFELYKSIAQGVLHASQGDRNPVAEKSLRDMMYRLV 1524
Score = 851 (304.6 bits), Expect = 1.6e-292, Sum P(2) = 1.6e-292
Identities = 178/383 (46%), Positives = 252/383 (65%)
Query: 42 NGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGD-DWG-DKKVICNKFIQQCPVTTMV 99
N +Y+++ +AFSPDSTKLA+AQSDNI+FIY+L D D G +KK ICNKF Q C VT++V
Sbjct: 61 NNPNTYIIRAMAFSPDSTKLAIAQSDNIVFIYRLVDPDTGAEKKSICNKFPQACAVTSLV 120
Query: 100 WLADGP--IIYGQSDGKIKAAHVKANKTQTLYA--SNSFVVALCLNVRGAGVLSGHADGS 155
W D P +++G +DGK++ +K NK+ T YA NS+VVAL ++ G V+SGH DG+
Sbjct: 121 WPKDRPNEVVFGLADGKVRLGMLKNNKSYTCYAHPENSYVVALASSLNGQNVISGHMDGA 180
Query: 156 IVRY-YVTEDASNFDQQQGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIF 214
I ++ + E+ Q +V H PY+L W I AAG+D V Y+ +GR R F
Sbjct: 181 IWKFNFPAEEGGTPTSSQ--LVVHSCVPYSLGW-GSCIAAAGNDNRVVFYDLNGREIRSF 237
Query: 215 DYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISA 274
DY+ + + REFT +PSG VV G+Y+ ++ ++ ++ WEE +K I N Y +SA
Sbjct: 238 DYSN-NDEVREFTTCAFNPSGDTVVFGTYNRFYMYTFNIQRNDWEEAGHKQIDNFYAVSA 296
Query: 275 LSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVI 334
SWK DGS++ G + G+V+++++ +KR ++KGKFE YVS S V+VK L G ++
Sbjct: 297 ASWKPDGSKMTVGSMTGAVDMYDACVKRHMYKGKFEFTYVSKSAVIVKTLK---TGMRIV 353
Query: 335 LKSQYGYEITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTV 394
LKS YGYEI + I +DRYL+ART TLL+GDL LSE+ W DS +EKF+F+N V
Sbjct: 354 LKSVYGYEIEKINIY-HDRYLIARTTYTLLMGDLDTCKLSEIPW-DSDGSEKFHFENERV 411
Query: 395 CLVFNAGELSIIEYGNNEIL-TC 416
C+V AGEL I+EYG N++L TC
Sbjct: 412 CMVHYAGELHIVEYGRNDVLGTC 434
Score = 293 (108.2 bits), Expect = 1.7e-233, Sum P(2) = 1.7e-233
Identities = 113/392 (28%), Positives = 179/392 (45%)
Query: 184 ALSW-PAGYILAAGS-DRIVTIYESDGRVHRIFDYTAPHYKE-REFTVACS--SPSGQAV 238
+L+W P LAA S D++V +++ +G F A + + SP +
Sbjct: 21 SLTWAPNNSRLAAVSTDKVVYLFDENGEKRDKFKTKAAEANNPNTYIIRAMAFSPDSTKL 80
Query: 239 VVGSYDNIKLFAW---SPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLC-GSVE 294
+ DNI +F + P ++ P +++L W +D GL G V
Sbjct: 81 AIAQSDNI-VFIYRLVDPDTGAEKKSICNKFPQACAVTSLVWPKDRPNEVVFGLADGKVR 139
Query: 295 LFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYG--YEITDVAIMGN- 351
L +LK K Y P V L+ G+ VI G ++ A G
Sbjct: 140 L--GMLKNN----KSYTCYAHPENSYVVALASSLNGQNVISGHMDGAIWKFNFPAEEGGT 193
Query: 352 --DRYLVART--PDTLLLGDLHRNLLSE--VLWPD-SGRN-EKFYFDN------VTVCLV 397
LV + P +L G ++ V++ D +GR F + N T C
Sbjct: 194 PTSSQLVVHSCVPYSLGWGSCIAAAGNDNRVVFYDLNGREIRSFDYSNNDEVREFTTC-A 252
Query: 398 FNAGELSIIEYGNNEILTCVSIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRI 457
FN +++ +G T ++ ++ ++ WEE +K I N Y +SA SWK DGS++
Sbjct: 253 FNPSGDTVV-FG-----TYNRFYMYTFNIQRNDWEEAGHKQIDNFYAVSAASWKPDGSKM 306
Query: 458 ACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEIT 517
G + G+V+++++ +KR ++KGKFE YVS S V+VK L G ++LKS YGYEI
Sbjct: 307 TVGSMTGAVDMYDACVKRHMYKGKFEFTYVSKSAVIVKTLK---TGMRIVLKSVYGYEIE 363
Query: 518 DVAIMGNDRYLVARTLLTEFMNPHLISVRLNE 549
+ I +DRYL+ART T M L + +L+E
Sbjct: 364 KINIY-HDRYLIARTTYTLLMGD-LDTCKLSE 393
Score = 42 (19.8 bits), Expect = 6.1e-207, Sum P(2) = 6.1e-207
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 272 ISALSWKRDGSRIACGGLCGSVELF-ESVLKRTIWKGK 308
I++L+W + SR+A V LF E+ KR +K K
Sbjct: 19 ITSLTWAPNNSRLAAVSTDKVVYLFDENGEKRDKFKTK 56
Score = 42 (19.8 bits), Expect = 6.1e-207, Sum P(2) = 6.1e-207
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 445 ISALSWKRDGSRIACGGLCGSVELF-ESVLKRTIWKGK 481
I++L+W + SR+A V LF E+ KR +K K
Sbjct: 19 ITSLTWAPNNSRLAAVSTDKVVYLFDENGEKRDKFKTK 56
>WB|WBGene00003883 [details] [associations]
symbol:osm-1 species:6239 "Caenorhabditis elegans"
[GO:0035058 "nonmotile primary cilium assembly" evidence=IMP]
[GO:0031513 "nonmotile primary cilium" evidence=IDA] [GO:0035869
"ciliary transition zone" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR015943
InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320 GO:GO:0007275
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
Gene3D:1.25.40.10 GO:GO:0035058 GO:GO:0035869 OMA:MAFIFLN
eggNOG:NOG289811 GeneTree:ENSGT00440000033648 HOGENOM:HOG000259226
EMBL:DQ360811 EMBL:FO081607 RefSeq:NP_510681.4 UniGene:Cel.253
ProteinModelPortal:Q22830 SMR:Q22830 STRING:Q22830 PaxDb:Q22830
EnsemblMetazoa:T27B1.1 GeneID:181715 KEGG:cel:CELE_T27B1.1
UCSC:T27B1.1 CTD:38282 WormBase:T27B1.1 InParanoid:Q22830
NextBio:915058 Uniprot:Q22830
Length = 1737
Score = 1936 (686.6 bits), Expect = 2.5e-274, Sum P(2) = 2.5e-274
Identities = 391/1102 (35%), Positives = 655/1102 (59%)
Query: 535 TEFMNPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVIDLITNLPTLHINHDSKIDWL 594
TE +PHL+SV+++ V ++ KKLAYL+D TI +I+LI INH +DW+
Sbjct: 427 TELTSPHLLSVQVSG-PDVEEHKKVKKLAYLVDPTTISIINLINGQQESFINHTGAVDWI 485
Query: 595 ELNETAHKLLYRDKKMRLTLLDIRTSEKHNILNYCTFVQWLPGSDVVVAQSRHNACVWYN 654
ELNE A KLLYRDK+ ++TL+DI + ++ +L++CT+VQW+P SDV+VAQS N +WYN
Sbjct: 486 ELNERASKLLYRDKRSKVTLVDISSDQRSVLLSFCTYVQWVPMSDVIVAQSGDNLSIWYN 545
Query: 655 IDTPDRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYELDESLIEFGTAVHDSDFGKA 714
D P+++T ++G++ V+R+ ++E++ Q+ ++ YELD + IEFG A+ DF +A
Sbjct: 546 PDLPEQVTNMKIKGEVEAVLRDADRTEVIVQEPTAKVAYELDNTQIEFGAALEKRDFDRA 605
Query: 715 ILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKIGEVW 774
+ +LES + +A MW +AE+A++ NL VA+ CYAA+ D++ L + ++I +
Sbjct: 606 VAFLES-NTSGTDAYSMWIRVAEMALEHGNLFVAQRCYAAINDVAKVRKLHDILEIADEA 664
Query: 775 SKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAE 834
S GD ++ A +AI+ ++FK AE I+LE N+ AI MY L+KW++AL LA+
Sbjct: 665 SISIG-GDGTHFYKVRAMLAIMGRKFKEAERIFLEQNDTESAIGMYTSLHKWDEALELAK 723
Query: 835 TNNY-EYNELKKKYIKWLTDTRQEDKAGELYEKEGDHQTALNYYLKANFTSKACNLVQNE 893
NY EY +LK Y++ L+DT Q+ KA EL +GD +A+ Y+K+N A + N+
Sbjct: 724 VLNYPEYEQLKTSYLRALSDTGQDSKAAELKVSDGDTLSAIQLYIKSNKPLSALSAANND 783
Query: 894 PYLLENHDVVSQIVKGLIKNESYIKAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKIN 953
L ++ +++ QI L+K++ Y KAG +YE + +KA+E ++KG Y K I L R
Sbjct: 784 SVLSQDENILRQIADSLVKSQLYDKAGDVYEKLKDFDKAVEYFKKGDAYGKAIQLARFAF 843
Query: 954 PKNVTALEEEWGDHLIENKQYNAAINHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNK 1013
P+ V LE+EWG HL QY+AA+NH++EA KA++ +I+AK+W KA+ I++ I ++
Sbjct: 844 PEKVVTLEQEWGLHLEYIGQYDAAVNHFVEANDLKKAVEAAIRAKEWPKALSIVENIQDQ 903
Query: 1014 QDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQ-HLNV 1072
+ + +A H+ D++ AE+++ + + MY + +W A+ ++E+ H
Sbjct: 904 KVRTGYYGEIADHYSNKGDFERAERLFVEAGLFNDAIMMYGKNNKWIDAFRLSEEFHGRE 963
Query: 1073 GEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYXXXX 1132
I ++++ K + L+E +F EAE+LY+ IG P AI M+ + +++++LV Y
Sbjct: 964 ATI-SSYLAKAEDLDEHGRFAEAEQLYITIGMPHKAIQMYDRVGRDDDVLRLVERYHGEH 1022
Query: 1133 XXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIALSNGGQEAV 1192
A + EE + K AE+ +L +++ A+ MY+ +W DAYRIA + GG+
Sbjct: 1023 MHETRKRFATQYEERGDLKAAEEQFLKAGDFRSAVNMYKDSEMWSDAYRIAKTEGGENME 1082
Query: 1193 EPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYK 1252
+ V+++WAKS+GGD+AV+LLN+ +L I AC+T FD AF+LA+IG K ++ VH +
Sbjct: 1083 KQVLFMWAKSIGGDAAVKLLNKHGMLMEGIDFACETGAFDLAFDLARIGAKDRMGTVHVR 1142
Query: 1253 YALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQS 1312
A LE+ G+ +A +++ NKP+ A+ M+I + DW +AER+A +H + + D+ Q+
Sbjct: 1143 LATQLEEEGRLEDASKHYVEGNKPELAVEMFIRDNDWADAERVAKDHCESLLPDVYTGQA 1202
Query: 1313 KCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDALRVCGEYVPSKLPLLQQEYEKE 1372
+ E + + ET LLRA+K D+I+ + N MW DALR+ Y+P + L+Q+EYEK
Sbjct: 1203 RRAIEEGDHLRAETFLLRANKPDIILRYFIENEMWPDALRIAQNYLPHQAALIQEEYEKS 1262
Query: 1373 INTNISKDIHSLITQARQWEQNGEFYNAVECYLKIK--NVDVNLMVKILNE-VTQLTLKY 1429
N ++ + S + QA++WEQ G++ AV LKI + D + ++K E L +K+
Sbjct: 1263 ELRNGARGVDSFVAQAKEWEQQGDWRKAVSALLKINRDSTDNDALIKHSTEKAADLVMKF 1322
Query: 1430 LNHDQSYKILPSLVPKLMEFKQYDLAVRVYLNIDMVKEAVDIFIYTQNWNKARKLCAELK 1489
L D+ Y + + + L E + A + L ++A++ + W KA+++ E
Sbjct: 1323 LMGDEEY--IGAALGALDEANCNEKAAELLLLFGQSRQAINALCRAKQWAKAKQVAQEYL 1380
Query: 1490 PEYLSYVENQYKEWLKKNGDADMLSEIDINTALDMLMKQGQWNQCLDKAKNINTN-LLHK 1548
PE + +E YKE LK G L ++D+ TA+DM+++ QW++ LD AK+ N LL K
Sbjct: 1381 PEMVPEIEKIYKESLKSEGRLGELIDVDVITAIDMMIENDQWDKALDTAKSQNYRPLLDK 1440
Query: 1549 YMALYAMHLIKNKEYAQLTQLFNEYGTPNIPQFYNIYKQTAYCILNDSNENVNLIISLRN 1608
Y+A YA L+ + +++ + YG P ++IYK L + I +RN
Sbjct: 1441 YVAQYAAILVHRNDLSRVLAVLERYGASANPANFSIYKLLMEETLAKPRFDYTEIARVRN 1500
Query: 1609 M---LFNVIKNQNNN--EEIDK 1625
+ ++N ++ +++ EE +
Sbjct: 1501 VHLDVYNALQKESSEHFEEFSR 1522
Score = 725 (260.3 bits), Expect = 2.5e-274, Sum P(2) = 2.5e-274
Identities = 151/380 (39%), Positives = 224/380 (58%)
Query: 43 GRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
G+KS+ V + FSPDS+++A+ QSDN++FIYK+G W +KKVI NKF+Q VT + W
Sbjct: 63 GKKSFTVLCMTFSPDSSRIAIGQSDNVLFIYKVGTSWNEKKVIVNKFVQPSAVTCLSWPF 122
Query: 103 DGPIIYGQSDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVT 162
D I+ GQ DGK++ +K NK +LY ++ VV++ + + +S H DGSI+ Y
Sbjct: 123 DDKILVGQLDGKVRIGLIKTNKCSSLYKTDETVVSIQTHPKRTSFVSAHQDGSIILY--- 179
Query: 163 EDASNFDQQ-QGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHY 221
NF + Q ++ VPPY L + ++ A SDR V Y +G V + FDY
Sbjct: 180 ----NFSSRTQSKICTLQVPPYNLVFTNHGLVVATSDRRVLSYTENGVVQQQFDYN--DQ 233
Query: 222 KEREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDG 281
E+EF+ P+ Q VVV SYD ++LF+WS + W+E I N YTI AL WK DG
Sbjct: 234 SEKEFSSISCDPTAQNVVVASYDRLRLFSWSARRGAWDEGAPLEIQNAYTIGALGWKMDG 293
Query: 282 SRIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGY 341
S I G +CG V + L+R + K +FE YV+PS V+++ ++ +++ VI S G
Sbjct: 294 STIYAGTVCGGVFSVDCCLRRGMLKSRFETTYVAPSHVILRDVTNDTR-TNVI--SNKGL 350
Query: 342 EITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAG 401
I ++ IMG DRY++ T ++++ D SE+ W SG +EKFYFD CL+ NAG
Sbjct: 351 AIDELKIMGKDRYVIGYTSSSIIIADTESQRFSELEW-QSGGHEKFYFDFNNCCLIINAG 409
Query: 402 ELSIIEYGNNEILTCVSIKL 421
E++++EYG + L V +L
Sbjct: 410 EVTVVEYGVDGSLGWVRTEL 429
Score = 298 (110.0 bits), Expect = 3.7e-229, Sum P(2) = 3.7e-229
Identities = 108/421 (25%), Positives = 186/421 (44%)
Query: 195 AGSDRIVTIYESDGRVHRIFDYTA--PHYKEREFTVACS--SPSGQAVVVGSYDNIKLFA 250
A SDR V + + +G F Y ++ FTV C SP + +G DN+ LF
Sbjct: 34 ACSDRSVALLDENGVQKDRFTCKPIDAKYGKKSFTVLCMTFSPDSSRIAIGQSDNV-LFI 92
Query: 251 WSPSKSVWEEQPNKTIPNLYT----ISALSWKRDGSRIACGGLCGSVE--LFESVLKRTI 304
+ S W E+ K I N + ++ LSW D +I G L G V L ++ ++
Sbjct: 93 YKVGTS-WNEK--KVIVNKFVQPSAVTCLSWPFD-DKILVGQLDGKVRIGLIKTNKCSSL 148
Query: 305 WKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTPDTLL 364
+K ++ + +S G +IL + + + + Y + T L+
Sbjct: 149 YKTDETVVSIQTHPKRTSFVSAHQDG-SIILYNFSSRTQSKICTLQVPPYNLVFTNHGLV 207
Query: 365 LGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNEILTCVS-IKLFA 423
+ R +LS + ++G ++ + N F++ +S N ++ ++LF+
Sbjct: 208 VATSDRRVLS---YTENGVVQQQFDYNDQSEKEFSS--ISCDPTAQNVVVASYDRLRLFS 262
Query: 424 WSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFE 483
WS + W+E I N YTI AL WK DGS I G +CG V + L+R + K +FE
Sbjct: 263 WSARRGAWDEGAPLEIQNAYTIGALGWKMDGSTIYAGTVCGGVFSVDCCLRRGMLKSRFE 322
Query: 484 MIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTLLTEFMNPHLI 543
YV+PS V+++ ++ +++ VI S G I ++ IMG DRY++ T + +
Sbjct: 323 TTYVAPSHVILRDVTNDTR-TNVI--SNKGLAIDELKIMGKDRYVIGYTS-SSIIIADTE 378
Query: 544 SVRLNERKQVHSQQENKKLAYLLDLHTICVIDLITNLPTLHINHDSKIDWLELNETAHKL 603
S R +E + E + D + C+I + + D + W+ T+ L
Sbjct: 379 SQRFSELEWQSGGHEK----FYFDFNNCCLIINAGEVTVVEYGVDGSLGWVRTELTSPHL 434
Query: 604 L 604
L
Sbjct: 435 L 435
Score = 58 (25.5 bits), Expect = 9.0e-204, Sum P(2) = 9.0e-204
Identities = 41/184 (22%), Positives = 70/184 (38%)
Query: 49 VKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDK---KVICNKFIQQC-PVTTMVWLADG 104
+ ++ SP+ ++ A+A SD + + D+ K I K+ ++ V M + D
Sbjct: 19 ISNISCSPNGSRAAIACSDRSVALLDENGVQKDRFTCKPIDAKYGKKSFTVLCMTFSPDS 78
Query: 105 P-IIYGQSDGKIKAAHVKANKTQTLYASNSFV---VALCLNVR-GAGVLSGHADGSI-VR 158
I GQSD + V + + N FV CL+ +L G DG + +
Sbjct: 79 SRIAIGQSDNVLFIYKVGTSWNEKKVIVNKFVQPSAVTCLSWPFDDKILVGQLDGKVRIG 138
Query: 159 YYVTEDASNFDQQQGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVH-RIFDYT 217
T S+ + VV P S+ ++A D + +Y R +I
Sbjct: 139 LIKTNKCSSLYKTDETVVSIQTHPKRTSF-----VSAHQDGSIILYNFSSRTQSKICTLQ 193
Query: 218 APHY 221
P Y
Sbjct: 194 VPPY 197
Score = 42 (19.8 bits), Expect = 6.8e-65, Sum P(3) = 6.8e-65
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 614 LLDIRTSEKHNILNYCTFVQWLPGSDVVVA 643
L+ I++++ N+LN FV GS + ++
Sbjct: 1707 LVVIKSNQTENLLNVQNFVAKWAGSPLAIS 1736
Score = 42 (19.8 bits), Expect = 6.8e-65, Sum P(3) = 6.8e-65
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 400 AGELSIIEYGNNEILTCVSIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDG 454
A EL ++ +G + + W+ +K V +E + +P + I S K +G
Sbjct: 1346 AAELLLL-FGQSRQAINALCRAKQWAKAKQVAQEYLPEMVPEIEKIYKESLKSEG 1399
Score = 40 (19.1 bits), Expect = 1.1e-64, Sum P(3) = 1.1e-64
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 692 GYELDESLIEFGTAVHDSD-FGKAILYLES 720
GY + ES + G+ V + D K ++ ++S
Sbjct: 1683 GYPVIESTVRIGSMVAEKDNLNKFLVVIKS 1712
Score = 37 (18.1 bits), Expect = 2.3e-64, Sum P(3) = 2.3e-64
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 409 GNN-EILTCVSIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRI 457
GN E+ + I+ W+ ++ V ++ +P++YT A +G +
Sbjct: 1163 GNKPELAVEMFIRDNDWADAERVAKDHCESLLPDVYTGQARRAIEEGDHL 1212
>UNIPROTKB|Q22830 [details] [associations]
symbol:osm-1 "Intraflagellar transport protein osm-1"
species:6239 "Caenorhabditis elegans" [GO:0042384 "cilium assembly"
evidence=ISS] [GO:0005929 "cilium" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR015943
InterPro:IPR019734 Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320 GO:GO:0007275
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
Gene3D:1.25.40.10 GO:GO:0035058 GO:GO:0035869 OMA:MAFIFLN
eggNOG:NOG289811 GeneTree:ENSGT00440000033648 HOGENOM:HOG000259226
EMBL:DQ360811 EMBL:FO081607 RefSeq:NP_510681.4 UniGene:Cel.253
ProteinModelPortal:Q22830 SMR:Q22830 STRING:Q22830 PaxDb:Q22830
EnsemblMetazoa:T27B1.1 GeneID:181715 KEGG:cel:CELE_T27B1.1
UCSC:T27B1.1 CTD:38282 WormBase:T27B1.1 InParanoid:Q22830
NextBio:915058 Uniprot:Q22830
Length = 1737
Score = 1936 (686.6 bits), Expect = 2.5e-274, Sum P(2) = 2.5e-274
Identities = 391/1102 (35%), Positives = 655/1102 (59%)
Query: 535 TEFMNPHLISVRLNERKQVHSQQENKKLAYLLDLHTICVIDLITNLPTLHINHDSKIDWL 594
TE +PHL+SV+++ V ++ KKLAYL+D TI +I+LI INH +DW+
Sbjct: 427 TELTSPHLLSVQVSG-PDVEEHKKVKKLAYLVDPTTISIINLINGQQESFINHTGAVDWI 485
Query: 595 ELNETAHKLLYRDKKMRLTLLDIRTSEKHNILNYCTFVQWLPGSDVVVAQSRHNACVWYN 654
ELNE A KLLYRDK+ ++TL+DI + ++ +L++CT+VQW+P SDV+VAQS N +WYN
Sbjct: 486 ELNERASKLLYRDKRSKVTLVDISSDQRSVLLSFCTYVQWVPMSDVIVAQSGDNLSIWYN 545
Query: 655 IDTPDRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYELDESLIEFGTAVHDSDFGKA 714
D P+++T ++G++ V+R+ ++E++ Q+ ++ YELD + IEFG A+ DF +A
Sbjct: 546 PDLPEQVTNMKIKGEVEAVLRDADRTEVIVQEPTAKVAYELDNTQIEFGAALEKRDFDRA 605
Query: 715 ILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKIGEVW 774
+ +LES + +A MW +AE+A++ NL VA+ CYAA+ D++ L + ++I +
Sbjct: 606 VAFLES-NTSGTDAYSMWIRVAEMALEHGNLFVAQRCYAAINDVAKVRKLHDILEIADEA 664
Query: 775 SKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAE 834
S GD ++ A +AI+ ++FK AE I+LE N+ AI MY L+KW++AL LA+
Sbjct: 665 SISIG-GDGTHFYKVRAMLAIMGRKFKEAERIFLEQNDTESAIGMYTSLHKWDEALELAK 723
Query: 835 TNNY-EYNELKKKYIKWLTDTRQEDKAGELYEKEGDHQTALNYYLKANFTSKACNLVQNE 893
NY EY +LK Y++ L+DT Q+ KA EL +GD +A+ Y+K+N A + N+
Sbjct: 724 VLNYPEYEQLKTSYLRALSDTGQDSKAAELKVSDGDTLSAIQLYIKSNKPLSALSAANND 783
Query: 894 PYLLENHDVVSQIVKGLIKNESYIKAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKIN 953
L ++ +++ QI L+K++ Y KAG +YE + +KA+E ++KG Y K I L R
Sbjct: 784 SVLSQDENILRQIADSLVKSQLYDKAGDVYEKLKDFDKAVEYFKKGDAYGKAIQLARFAF 843
Query: 954 PKNVTALEEEWGDHLIENKQYNAAINHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNK 1013
P+ V LE+EWG HL QY+AA+NH++EA KA++ +I+AK+W KA+ I++ I ++
Sbjct: 844 PEKVVTLEQEWGLHLEYIGQYDAAVNHFVEANDLKKAVEAAIRAKEWPKALSIVENIQDQ 903
Query: 1014 QDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQ-HLNV 1072
+ + +A H+ D++ AE+++ + + MY + +W A+ ++E+ H
Sbjct: 904 KVRTGYYGEIADHYSNKGDFERAERLFVEAGLFNDAIMMYGKNNKWIDAFRLSEEFHGRE 963
Query: 1073 GEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYXXXX 1132
I ++++ K + L+E +F EAE+LY+ IG P AI M+ + +++++LV Y
Sbjct: 964 ATI-SSYLAKAEDLDEHGRFAEAEQLYITIGMPHKAIQMYDRVGRDDDVLRLVERYHGEH 1022
Query: 1133 XXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIALSNGGQEAV 1192
A + EE + K AE+ +L +++ A+ MY+ +W DAYRIA + GG+
Sbjct: 1023 MHETRKRFATQYEERGDLKAAEEQFLKAGDFRSAVNMYKDSEMWSDAYRIAKTEGGENME 1082
Query: 1193 EPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYK 1252
+ V+++WAKS+GGD+AV+LLN+ +L I AC+T FD AF+LA+IG K ++ VH +
Sbjct: 1083 KQVLFMWAKSIGGDAAVKLLNKHGMLMEGIDFACETGAFDLAFDLARIGAKDRMGTVHVR 1142
Query: 1253 YALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQS 1312
A LE+ G+ +A +++ NKP+ A+ M+I + DW +AER+A +H + + D+ Q+
Sbjct: 1143 LATQLEEEGRLEDASKHYVEGNKPELAVEMFIRDNDWADAERVAKDHCESLLPDVYTGQA 1202
Query: 1313 KCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDALRVCGEYVPSKLPLLQQEYEKE 1372
+ E + + ET LLRA+K D+I+ + N MW DALR+ Y+P + L+Q+EYEK
Sbjct: 1203 RRAIEEGDHLRAETFLLRANKPDIILRYFIENEMWPDALRIAQNYLPHQAALIQEEYEKS 1262
Query: 1373 INTNISKDIHSLITQARQWEQNGEFYNAVECYLKIK--NVDVNLMVKILNE-VTQLTLKY 1429
N ++ + S + QA++WEQ G++ AV LKI + D + ++K E L +K+
Sbjct: 1263 ELRNGARGVDSFVAQAKEWEQQGDWRKAVSALLKINRDSTDNDALIKHSTEKAADLVMKF 1322
Query: 1430 LNHDQSYKILPSLVPKLMEFKQYDLAVRVYLNIDMVKEAVDIFIYTQNWNKARKLCAELK 1489
L D+ Y + + + L E + A + L ++A++ + W KA+++ E
Sbjct: 1323 LMGDEEY--IGAALGALDEANCNEKAAELLLLFGQSRQAINALCRAKQWAKAKQVAQEYL 1380
Query: 1490 PEYLSYVENQYKEWLKKNGDADMLSEIDINTALDMLMKQGQWNQCLDKAKNINTN-LLHK 1548
PE + +E YKE LK G L ++D+ TA+DM+++ QW++ LD AK+ N LL K
Sbjct: 1381 PEMVPEIEKIYKESLKSEGRLGELIDVDVITAIDMMIENDQWDKALDTAKSQNYRPLLDK 1440
Query: 1549 YMALYAMHLIKNKEYAQLTQLFNEYGTPNIPQFYNIYKQTAYCILNDSNENVNLIISLRN 1608
Y+A YA L+ + +++ + YG P ++IYK L + I +RN
Sbjct: 1441 YVAQYAAILVHRNDLSRVLAVLERYGASANPANFSIYKLLMEETLAKPRFDYTEIARVRN 1500
Query: 1609 M---LFNVIKNQNNN--EEIDK 1625
+ ++N ++ +++ EE +
Sbjct: 1501 VHLDVYNALQKESSEHFEEFSR 1522
Score = 725 (260.3 bits), Expect = 2.5e-274, Sum P(2) = 2.5e-274
Identities = 151/380 (39%), Positives = 224/380 (58%)
Query: 43 GRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
G+KS+ V + FSPDS+++A+ QSDN++FIYK+G W +KKVI NKF+Q VT + W
Sbjct: 63 GKKSFTVLCMTFSPDSSRIAIGQSDNVLFIYKVGTSWNEKKVIVNKFVQPSAVTCLSWPF 122
Query: 103 DGPIIYGQSDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVT 162
D I+ GQ DGK++ +K NK +LY ++ VV++ + + +S H DGSI+ Y
Sbjct: 123 DDKILVGQLDGKVRIGLIKTNKCSSLYKTDETVVSIQTHPKRTSFVSAHQDGSIILY--- 179
Query: 163 EDASNFDQQ-QGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHY 221
NF + Q ++ VPPY L + ++ A SDR V Y +G V + FDY
Sbjct: 180 ----NFSSRTQSKICTLQVPPYNLVFTNHGLVVATSDRRVLSYTENGVVQQQFDYN--DQ 233
Query: 222 KEREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDG 281
E+EF+ P+ Q VVV SYD ++LF+WS + W+E I N YTI AL WK DG
Sbjct: 234 SEKEFSSISCDPTAQNVVVASYDRLRLFSWSARRGAWDEGAPLEIQNAYTIGALGWKMDG 293
Query: 282 SRIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGY 341
S I G +CG V + L+R + K +FE YV+PS V+++ ++ +++ VI S G
Sbjct: 294 STIYAGTVCGGVFSVDCCLRRGMLKSRFETTYVAPSHVILRDVTNDTR-TNVI--SNKGL 350
Query: 342 EITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAG 401
I ++ IMG DRY++ T ++++ D SE+ W SG +EKFYFD CL+ NAG
Sbjct: 351 AIDELKIMGKDRYVIGYTSSSIIIADTESQRFSELEW-QSGGHEKFYFDFNNCCLIINAG 409
Query: 402 ELSIIEYGNNEILTCVSIKL 421
E++++EYG + L V +L
Sbjct: 410 EVTVVEYGVDGSLGWVRTEL 429
Score = 298 (110.0 bits), Expect = 3.7e-229, Sum P(2) = 3.7e-229
Identities = 108/421 (25%), Positives = 186/421 (44%)
Query: 195 AGSDRIVTIYESDGRVHRIFDYTA--PHYKEREFTVACS--SPSGQAVVVGSYDNIKLFA 250
A SDR V + + +G F Y ++ FTV C SP + +G DN+ LF
Sbjct: 34 ACSDRSVALLDENGVQKDRFTCKPIDAKYGKKSFTVLCMTFSPDSSRIAIGQSDNV-LFI 92
Query: 251 WSPSKSVWEEQPNKTIPNLYT----ISALSWKRDGSRIACGGLCGSVE--LFESVLKRTI 304
+ S W E+ K I N + ++ LSW D +I G L G V L ++ ++
Sbjct: 93 YKVGTS-WNEK--KVIVNKFVQPSAVTCLSWPFD-DKILVGQLDGKVRIGLIKTNKCSSL 148
Query: 305 WKGKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTPDTLL 364
+K ++ + +S G +IL + + + + Y + T L+
Sbjct: 149 YKTDETVVSIQTHPKRTSFVSAHQDG-SIILYNFSSRTQSKICTLQVPPYNLVFTNHGLV 207
Query: 365 LGDLHRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELSIIEYGNNEILTCVS-IKLFA 423
+ R +LS + ++G ++ + N F++ +S N ++ ++LF+
Sbjct: 208 VATSDRRVLS---YTENGVVQQQFDYNDQSEKEFSS--ISCDPTAQNVVVASYDRLRLFS 262
Query: 424 WSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFE 483
WS + W+E I N YTI AL WK DGS I G +CG V + L+R + K +FE
Sbjct: 263 WSARRGAWDEGAPLEIQNAYTIGALGWKMDGSTIYAGTVCGGVFSVDCCLRRGMLKSRFE 322
Query: 484 MIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTLLTEFMNPHLI 543
YV+PS V+++ ++ +++ VI S G I ++ IMG DRY++ T + +
Sbjct: 323 TTYVAPSHVILRDVTNDTR-TNVI--SNKGLAIDELKIMGKDRYVIGYTS-SSIIIADTE 378
Query: 544 SVRLNERKQVHSQQENKKLAYLLDLHTICVIDLITNLPTLHINHDSKIDWLELNETAHKL 603
S R +E + E + D + C+I + + D + W+ T+ L
Sbjct: 379 SQRFSELEWQSGGHEK----FYFDFNNCCLIINAGEVTVVEYGVDGSLGWVRTELTSPHL 434
Query: 604 L 604
L
Sbjct: 435 L 435
Score = 58 (25.5 bits), Expect = 9.0e-204, Sum P(2) = 9.0e-204
Identities = 41/184 (22%), Positives = 70/184 (38%)
Query: 49 VKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDK---KVICNKFIQQC-PVTTMVWLADG 104
+ ++ SP+ ++ A+A SD + + D+ K I K+ ++ V M + D
Sbjct: 19 ISNISCSPNGSRAAIACSDRSVALLDENGVQKDRFTCKPIDAKYGKKSFTVLCMTFSPDS 78
Query: 105 P-IIYGQSDGKIKAAHVKANKTQTLYASNSFV---VALCLNVR-GAGVLSGHADGSI-VR 158
I GQSD + V + + N FV CL+ +L G DG + +
Sbjct: 79 SRIAIGQSDNVLFIYKVGTSWNEKKVIVNKFVQPSAVTCLSWPFDDKILVGQLDGKVRIG 138
Query: 159 YYVTEDASNFDQQQGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVH-RIFDYT 217
T S+ + VV P S+ ++A D + +Y R +I
Sbjct: 139 LIKTNKCSSLYKTDETVVSIQTHPKRTSF-----VSAHQDGSIILYNFSSRTQSKICTLQ 193
Query: 218 APHY 221
P Y
Sbjct: 194 VPPY 197
Score = 42 (19.8 bits), Expect = 6.8e-65, Sum P(3) = 6.8e-65
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 614 LLDIRTSEKHNILNYCTFVQWLPGSDVVVA 643
L+ I++++ N+LN FV GS + ++
Sbjct: 1707 LVVIKSNQTENLLNVQNFVAKWAGSPLAIS 1736
Score = 42 (19.8 bits), Expect = 6.8e-65, Sum P(3) = 6.8e-65
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 400 AGELSIIEYGNNEILTCVSIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDG 454
A EL ++ +G + + W+ +K V +E + +P + I S K +G
Sbjct: 1346 AAELLLL-FGQSRQAINALCRAKQWAKAKQVAQEYLPEMVPEIEKIYKESLKSEG 1399
Score = 40 (19.1 bits), Expect = 1.1e-64, Sum P(3) = 1.1e-64
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 692 GYELDESLIEFGTAVHDSD-FGKAILYLES 720
GY + ES + G+ V + D K ++ ++S
Sbjct: 1683 GYPVIESTVRIGSMVAEKDNLNKFLVVIKS 1712
Score = 37 (18.1 bits), Expect = 2.3e-64, Sum P(3) = 2.3e-64
Identities = 11/50 (22%), Positives = 24/50 (48%)
Query: 409 GNN-EILTCVSIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRI 457
GN E+ + I+ W+ ++ V ++ +P++YT A +G +
Sbjct: 1163 GNKPELAVEMFIRDNDWADAERVAKDHCESLLPDVYTGQARRAIEEGDHL 1212
>MGI|MGI:1915509 [details] [associations]
symbol:Ift80 "intraflagellar transport 80" species:10090
"Mus musculus" [GO:0001649 "osteoblast differentiation"
evidence=IGI;IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007224 "smoothened signaling pathway"
evidence=IMP] [GO:0042995 "cell projection" evidence=IEA]
[GO:0060271 "cilium morphogenesis" evidence=IMP] [GO:0060349 "bone
morphogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1915509 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005929
eggNOG:COG2319 GO:GO:0005932 GO:GO:0001649 GO:GO:0060349
GO:GO:0007224 GO:GO:0060271 GO:GO:0035085 CTD:57560
HOGENOM:HOG000256816 HOVERGEN:HBG056828 OMA:WSRSGML
OrthoDB:EOG4K3KX1 EMBL:AK129339 EMBL:BC013814 EMBL:BC034101
EMBL:AK042231 IPI:IPI00172132 IPI:IPI00858175 RefSeq:NP_080917.1
UniGene:Mm.389451 ProteinModelPortal:Q8K057 SMR:Q8K057
STRING:Q8K057 PhosphoSite:Q8K057 PaxDb:Q8K057 PRIDE:Q8K057
Ensembl:ENSMUST00000029347 Ensembl:ENSMUST00000107812
Ensembl:ENSMUST00000169064 GeneID:68259 KEGG:mmu:68259
UCSC:uc008plx.2 GeneTree:ENSGT00440000033499 InParanoid:Q8K057
NextBio:326842 Bgee:Q8K057 Genevestigator:Q8K057
GermOnline:ENSMUSG00000027778 Uniprot:Q8K057
Length = 777
Score = 130 (50.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 69/301 (22%), Positives = 131/301 (43%)
Query: 585 INHDSKIDWLELNETA----HKLLYRDKKMRLTLLDI-RTSEKHNILNYCTFVQ---WLP 636
++H ++I + L++ K+ + DK L + + R ++ I+ T V W
Sbjct: 457 LSHKNEISEIALDQKGLTNDRKIAFIDKNRDLYITSVKRFGKEEQIIKLGTMVHTLAWCD 516
Query: 637 GSDVVVAQSRHNACVWYNIDT--PDRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYE 694
+++ VWY +T DR P D + I++ GN
Sbjct: 517 TCNILCGIQDTRFTVWYYPNTIYVDRDI-LPKTLYERDASEYSKNPHIVSFVGNQVTIRR 575
Query: 695 LDESLIEFGTAVHDS---DFGKAILYLESLGINK--KEAEGMWQNLAEVAIQLHNLHVAE 749
D SL+ + + + ++ + + E++ + + KE + MW LA +A+ ++ AE
Sbjct: 576 ADGSLVHISISPYPAILHEYVSSSKWEEAVRLCRFVKE-QSMWACLAAMAVANRDMVTAE 634
Query: 750 ICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLE 809
I YAA+G+I ++ IK ++ S+E+ + A + + + + AE + L+
Sbjct: 635 IAYAAVGEIDKVRYIN-AIK--DLPSRESKM----------AHILMFSGNIQEAETVLLQ 681
Query: 810 NNEIHKAIDMYLKLYKWEDALSLAETNNYEYNELKKKYIKWLTDT--RQEDKAGELYEKE 867
+++AI + + LY WE AL LA + + K+L DT +QE L E
Sbjct: 682 AGLVYQAIQININLYNWERALELAVKYKTHVDTVLAYRQKFL-DTFGKQETNKRYLQYAE 740
Query: 868 G 868
G
Sbjct: 741 G 741
Score = 114 (45.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 38/117 (32%), Positives = 60/117 (51%)
Query: 192 ILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAW 251
IL+AG D +++S GRV ++ + PH E T +P G+ VGS+ ++L
Sbjct: 203 ILSAGEDCKYKVWDSYGRV--LYG-SQPH--EHPITSVAWAPDGELFAVGSFHTLRLC-- 255
Query: 252 SPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL-FESVLK-RTIWK 306
K+ W K PN +I ++W DG++IA G CG+ + F V++ R WK
Sbjct: 256 --DKTGWSYALEK--PNTGSIFNIAWSIDGTQIA--GACGNGHVVFAHVVEQRWEWK 306
Score = 74 (31.1 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 1252 KYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQ 1311
K A +L +G EAET ++A +AI + I+ +WE A +A ++ T + +L +
Sbjct: 661 KMAHILMFSGNIQEAETVLLQAGLVYQAIQININLYNWERALELAVKYK-THVDTVLAYR 719
Query: 1312 SKCEFENENFSKFET 1326
K F + F K ET
Sbjct: 720 QK--FL-DTFGKQET 731
Score = 64 (27.6 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 31/128 (24%), Positives = 58/128 (45%)
Query: 277 WKRDGSRIACGGLCGSVELFES--VLKRTI-----------WKGKFE-MIYVSPSQVLVK 322
W +G+ + G G V+++ +L+ T+ W E ++Y + Q+++K
Sbjct: 114 WNYEGTALVTVGEDGQVKIWSKTGMLRSTLAQQGTPVYSVAWGPDSEKVLYTAGKQLIIK 173
Query: 323 PLSGESK------GRGVILKSQYGYEITDVAIM-GND-RYLVARTPDTLLLGDL-HRNLL 373
PL +K G+ILK + + D+ + G D +Y V + +L G H + +
Sbjct: 174 PLQPNAKVLQWKAHDGIILKVDWN-SVNDLILSAGEDCKYKVWDSYGRVLYGSQPHEHPI 232
Query: 374 SEVLW-PD 380
+ V W PD
Sbjct: 233 TSVAWAPD 240
Score = 61 (26.5 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 428 KSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL-FESVLK-RTIWK 479
K+ W K PN +I ++W DG++IA G CG+ + F V++ R WK
Sbjct: 257 KTGWSYALEK--PNTGSIFNIAWSIDGTQIA--GACGNGHVVFAHVVEQRWEWK 306
Score = 58 (25.5 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 19/92 (20%), Positives = 40/92 (43%)
Query: 73 YKLGDDWGDKKVICNKFIQQCPVTTMVWLADGPIIYGQSDGKIKAAHVKANKTQTLYASN 132
YK+ D +G +V+ + P+T++ W DG + S ++ K + L N
Sbjct: 212 YKVWDSYG--RVLYGSQPHEHPITSVAWAPDGELFAVGSFHTLRLCD-KTGWSYALEKPN 268
Query: 133 S-FVVALCLNVRGAGVLSGHADGSIVRYYVTE 163
+ + + ++ G + +G +V +V E
Sbjct: 269 TGSIFNIAWSIDGTQIAGACGNGHVVFAHVVE 300
Score = 52 (23.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 36/182 (19%), Positives = 74/182 (40%)
Query: 111 SDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVTEDASNFDQ 170
SDGK +++ A V+A N G +++ DG + + T +
Sbjct: 85 SDGKFHLISKLGRVEKSVEAHCGAVLAGRWNYEGTALVTVGEDGQVKIWSKTGMLRSTLA 144
Query: 171 QQGRVVQHPVPPYALSW-PAG--YILAAGSDRIVTIYESDGRVHRIFDYTAPHYKERE-F 226
QQG P Y+++W P + AG I+ + + +V + +K +
Sbjct: 145 QQG------TPVYSVAWGPDSEKVLYTAGKQLIIKPLQPNAKVLQ--------WKAHDGI 190
Query: 227 TVACSSPSGQAVVVGSYDNIKLFAW-SPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIA 285
+ S +++ + ++ K W S + ++ QP++ + I++++W DG A
Sbjct: 191 ILKVDWNSVNDLILSAGEDCKYKVWDSYGRVLYGSQPHE-----HPITSVAWAPDGELFA 245
Query: 286 CG 287
G
Sbjct: 246 VG 247
Score = 49 (22.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 29/126 (23%), Positives = 57/126 (45%)
Query: 337 SQYGYEITDVAIMGNDRYLVARTPDT-LLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVC 395
S+ G + +A G Y VA PD+ +L + L+ + L P++ + D + +
Sbjct: 134 SKTGMLRSTLAQQGTPVYSVAWGPDSEKVLYTAGKQLIIKPLQPNAKVLQWKAHDGIILK 193
Query: 396 LVFNAGELSIIEYGNNEILTCVSIKLFAW-SPSKSVWEEQPNKTIPNLYTISALSWKRDG 454
+ +N+ I+ G + C K W S + ++ QP++ + I++++W DG
Sbjct: 194 VDWNSVNDLILSAGED----C---KYKVWDSYGRVLYGSQPHE-----HPITSVAWAPDG 241
Query: 455 SRIACG 460
A G
Sbjct: 242 ELFAVG 247
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 608 KKMRLTLLDIRTSEKHNILNYCTFVQWLPGSDVVVAQSRHNA 649
K ++TL RT + N+LN V L D V+ S ++A
Sbjct: 306 KNFQVTLTKRRTMQVRNVLNDA--VDLLEFRDRVIKASLNHA 345
>UNIPROTKB|F1PNI0 [details] [associations]
symbol:IFT80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060349 "bone morphogenesis" evidence=IEA]
[GO:0060271 "cilium morphogenesis" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005929 OMA:WSRSGML
GeneTree:ENSGT00440000033499 EMBL:AAEX03017331
Ensembl:ENSCAFT00000022596 Uniprot:F1PNI0
Length = 784
Score = 127 (49.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 70/300 (23%), Positives = 131/300 (43%)
Query: 585 INHDSKIDWLELNETA----HKLLYRDKKMRLTLLDI-RTSEKHNILNYCTFVQWLPGSD 639
++H ++I + L++ K+ + DK L + + R ++ I+ T V L SD
Sbjct: 464 LSHKNEILEIALDQKGLTNDRKIAFIDKNRDLYITSVKRFGKEEQIIKLGTMVHTLAWSD 523
Query: 640 ---VVVAQSRHNACVWYNIDTP--DRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYE 694
++ VWY +T DR P D + I++ GN
Sbjct: 524 TCNILCGLQDTRFTVWYYPNTVYVDRDI-LPKTLYERDASEFSKNPHIVSFVGNQVTIRR 582
Query: 695 LDESLIEFGTAVHDS---DFGKAILYLESLGINK--KEAEGMWQNLAEVAIQLHNLHVAE 749
D SL+ + + + ++ + +++ + + KE + MW LA +A+ ++ AE
Sbjct: 583 ADGSLVHISISPYPAILHEYVSGSKWEDAVRLCRFVKE-QTMWACLAAMAVANRDMTTAE 641
Query: 750 ICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLE 809
I YAA+G+I ++ +IK ++ SKE+ + A + + + + AE + L+
Sbjct: 642 IAYAAIGEIDKVQYIN-SIK--DLPSKESKM----------AHILMFSGNIQEAEMVLLQ 688
Query: 810 NNEIHKAIDMYLKLYKWEDALSLAETNNYEYNELKKKYIKWL-TDTRQEDKAGELYEKEG 868
+++AI + + LY WE AL LA + + K+L T +QE L EG
Sbjct: 689 AGLVYQAIQININLYNWERALELAVKYKTHVDTVLAYRQKFLETFGKQETNKRYLQYAEG 748
Score = 114 (45.2 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 49/192 (25%), Positives = 89/192 (46%)
Query: 192 ILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAW 251
IL+AG D +++S GR +++ + PH E T +P G+ VGS+ ++L
Sbjct: 210 ILSAGEDCKYKVWDSYGRP--LYN-SLPH--EHPITSVAWAPDGELFAVGSFHTLRLC-- 262
Query: 252 SPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL-FESVLK-RTIWKGKF 309
K+ W K PN +I ++W DG++IA G CG+ + F V++ R WK F
Sbjct: 263 --DKTGWSYALEK--PNTGSIFNIAWSIDGTQIA--GACGNGHVVFAHVVEQRWEWKN-F 315
Query: 310 EMIYVSPSQVLVKPLSGES----KGRGVILKSQYGYEITDVAIMGNDRYLVARTPDTLLL 365
++ + V+ + ++ + R ++K+ Y V+ + +T L+
Sbjct: 316 QVTLTKRRTMQVRNVLNDAVDLLEFRDRVIKASLNYAHLVVSTSLQCYVFSTKNWNTPLI 375
Query: 366 GDLHRNLLSEVL 377
DL +S +L
Sbjct: 376 FDLKEGTVSLIL 387
Score = 71 (30.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 1252 KYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQ 1311
K A +L +G EAE ++A +AI + I+ +WE A +A ++ T + +L +
Sbjct: 668 KMAHILMFSGNIQEAEMVLLQAGLVYQAIQININLYNWERALELAVKYK-THVDTVLAYR 726
Query: 1312 SKCEFENENFSKFET 1326
K F E F K ET
Sbjct: 727 QK--FL-ETFGKQET 738
Score = 61 (26.5 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 428 KSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL-FESVLK-RTIWK 479
K+ W K PN +I ++W DG++IA G CG+ + F V++ R WK
Sbjct: 264 KTGWSYALEK--PNTGSIFNIAWSIDGTQIA--GACGNGHVVFAHVVEQRWEWK 313
Score = 61 (26.5 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 19/92 (20%), Positives = 40/92 (43%)
Query: 73 YKLGDDWGDKKVICNKFIQQCPVTTMVWLADGPIIYGQSDGKIKAAHVKANKTQTLYASN 132
YK+ D +G + + N + P+T++ W DG + S ++ K + L N
Sbjct: 219 YKVWDSYG--RPLYNSLPHEHPITSVAWAPDGELFAVGSFHTLRLCD-KTGWSYALEKPN 275
Query: 133 S-FVVALCLNVRGAGVLSGHADGSIVRYYVTE 163
+ + + ++ G + +G +V +V E
Sbjct: 276 TGSIFNIAWSIDGTQIAGACGNGHVVFAHVVE 307
Score = 59 (25.8 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 22/81 (27%), Positives = 40/81 (49%)
Query: 310 EMIYVSPSQVLVKPLSGESK------GRGVILKSQYGYEITDVAIM-GND-RYLVARTPD 361
+++Y + Q+++KPL +K G+ILK + + D+ + G D +Y V +
Sbjct: 168 KVLYTAGKQLIIKPLQPNAKVLQWKAHDGIILKVDWN-SVNDLILSAGEDCKYKVWDSYG 226
Query: 362 TLLLGDL-HRNLLSEVLW-PD 380
L L H + ++ V W PD
Sbjct: 227 RPLYNSLPHEHPITSVAWAPD 247
Score = 52 (23.4 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 35/145 (24%), Positives = 62/145 (42%)
Query: 332 GVILKSQYGYEITDVAIMGNDRYLVARTPDTLLLGDLHRN--LLSEVLW-PDS------- 381
G +L ++ YE T + +G D + + +L L + + V W PDS
Sbjct: 114 GAVLAGRWNYEGTALVTVGEDGQIKIWSKTGMLRSTLAQQGTPVYSVAWGPDSEKVLYTA 173
Query: 382 GRNE--KFYFDNVTVCLVFNAGELSIIEYGNNEILTCVSIKLFAWSPSK-SVWEE--QP- 435
G+ K N V L + A + I++ N + + L A K VW+ +P
Sbjct: 174 GKQLIIKPLQPNAKV-LQWKAHDGIILKVDWNSVNDLI---LSAGEDCKYKVWDSYGRPL 229
Query: 436 NKTIPNLYTISALSWKRDGSRIACG 460
++P+ + I++++W DG A G
Sbjct: 230 YNSLPHEHPITSVAWAPDGELFAVG 254
Score = 50 (22.7 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 37/181 (20%), Positives = 72/181 (39%)
Query: 111 SDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVTEDASNFDQ 170
SDGK +++ A V+A N G +++ DG I + T +
Sbjct: 92 SDGKFHLISKLGRVEKSVEAHCGAVLAGRWNYEGTALVTVGEDGQIKIWSKTGMLRSTLA 151
Query: 171 QQGRVVQHPVPPYALSW-PAG--YILAAGSDRIVTIYESDGRVHRIFDYTAPHYKERE-F 226
QQG P Y+++W P + AG I+ + + +V + +K +
Sbjct: 152 QQG------TPVYSVAWGPDSEKVLYTAGKQLIIKPLQPNAKVLQ--------WKAHDGI 197
Query: 227 TVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIAC 286
+ S +++ + ++ K W S N ++P+ + I++++W DG A
Sbjct: 198 ILKVDWNSVNDLILSAGEDCKYKVWD---SYGRPLYN-SLPHEHPITSVAWAPDGELFAV 253
Query: 287 G 287
G
Sbjct: 254 G 254
>UNIPROTKB|E1BT30 [details] [associations]
symbol:IFT80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001649 "osteoblast differentiation" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0060271 "cilium morphogenesis" evidence=IEA]
[GO:0060349 "bone morphogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005929 GeneTree:ENSGT00440000033499
EMBL:AADN02021067 IPI:IPI00603526 Ensembl:ENSGALT00000015564
ArrayExpress:E1BT30 Uniprot:E1BT30
Length = 780
Score = 133 (51.9 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 74/322 (22%), Positives = 141/322 (43%)
Query: 567 DLHTICVIDLITNLPT---LHINHDSKIDWLELNETA----HKLLYRDKKMRLTLLDI-R 618
D I + D I+ P + H ++I + L++ K+ + DK L + + R
Sbjct: 437 DEKVIYIFDAISGKPLGDGKSLTHKTEIVEIALDQKGLTNERKIAFIDKNRDLYITSVKR 496
Query: 619 TSEKHNILNYCTFVQ---WLPGSDVVVAQSRHNACVWYNIDT----PDRITQFPVRGDII 671
++ I+ T VQ W S+++ + VWY +T D +T+ D
Sbjct: 497 FGKEQKIVKIGTMVQTLAWNDTSNLLCGIQDTHFTVWYYPNTVYVDKDLLTKTLYEKDAS 556
Query: 672 DVIRENGQSEILTQDGNHQLGYELDESLIEFGTAVHD---SDFGKAILYLESLGINK-KE 727
D +N Q I+ GN D SLI + + ++ + + +++ + + +
Sbjct: 557 D-FSKNPQ--IVHFVGNQITIRRADGSLIHINISPYPVILHEYVSSSKWEDAVRLCRFVK 613
Query: 728 AEGMWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCP 787
+ MW LA +A+ ++ AEI YA++G+I ++ IK ++ SKE+ +
Sbjct: 614 DQTMWACLAAMAVANKDMATAEIAYASIGEIDKVQYIN-FIK--DLPSKESRM------- 663
Query: 788 ELWARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAETNNYEYNELKKKY 847
A + + + + AE + L+ I++AI + + LY W+ AL LA + + +
Sbjct: 664 ---AHILLFSGNTQEAETLLLQTGLIYQAIQVNINLYNWDRALELAVKHKTHVDTVLAYR 720
Query: 848 IKWLTDT-RQEDKAGELYEKEG 868
K+L D ++E L EG
Sbjct: 721 QKFLEDFGKKETNKRFLQYAEG 742
Score = 107 (42.7 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 38/125 (30%), Positives = 62/125 (49%)
Query: 192 ILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAW 251
IL+AG D +++S G H ++ + PH E T S G+ VGS+ ++L
Sbjct: 204 ILSAGEDCKYKVWDSYG--HLLYS-SQPH--EYPITSVAWSGDGELFAVGSFHTLRLC-- 256
Query: 252 SPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVE-LFESVLK-RTIWKGKF 309
K+ W K PN +I ++W DG+++A G CG+ +F V++ R WK F
Sbjct: 257 --DKTGWSYALEK--PNTGSIFNIAWSVDGTQLA--GACGNGHVIFAHVVEQRWEWKN-F 309
Query: 310 EMIYV 314
E+ +
Sbjct: 310 EITLI 314
Score = 70 (29.7 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 1252 KYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQ 1311
+ A +L +G EAET ++ +AI + I+ +W+ A +A +H T + +L +
Sbjct: 662 RMAHILLFSGNTQEAETLLLQTGLIYQAIQVNINLYNWDRALELAVKHK-THVDTVLAYR 720
Query: 1312 SKCEFENENFSKFET 1326
K F E+F K ET
Sbjct: 721 QK--FL-EDFGKKET 732
Score = 64 (27.6 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 428 KSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVE-LFESVLK-RTIWKGKFEMI 485
K+ W K PN +I ++W DG+++A G CG+ +F V++ R WK FE+
Sbjct: 258 KTGWSYALEK--PNTGSIFNIAWSVDGTQLA--GACGNGHVIFAHVVEQRWEWKN-FEIT 312
Query: 486 YV 487
+
Sbjct: 313 LI 314
Score = 52 (23.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 18/92 (19%), Positives = 40/92 (43%)
Query: 73 YKLGDDWGDKKVICNKFIQQCPVTTMVWLADGPIIYGQSDGKIKAAHVKANKTQTLYASN 132
YK+ D +G ++ + + P+T++ W DG + S ++ K + L N
Sbjct: 213 YKVWDSYGH--LLYSSQPHEYPITSVAWSGDGELFAVGSFHTLRLCD-KTGWSYALEKPN 269
Query: 133 S-FVVALCLNVRGAGVLSGHADGSIVRYYVTE 163
+ + + +V G + +G ++ +V E
Sbjct: 270 TGSIFNIAWSVDGTQLAGACGNGHVIFAHVVE 301
Score = 50 (22.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 42/170 (24%), Positives = 71/170 (41%)
Query: 307 GKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTPDTLLLG 366
GKF +I S + K + S G +L ++ E T +A +G D + + +L
Sbjct: 88 GKFHLI--SKVGRVEKSVEAHS---GAVLAGRWNSEGTALATVGEDGQVKIWSKSGMLRS 142
Query: 367 DLHRN--LLSEVLW-PDS-------GRNE--KFYFDNVTVCLVFNAGELSIIEYGNNEIL 414
L + + V W PDS G+ K NV + L + A + I++ N +
Sbjct: 143 TLAQQGTPVYSVAWGPDSEKVLYTSGKQLIIKPLQPNVKL-LQWKAHDGLILKTDWNSVN 201
Query: 415 TCVSIKLFAWSPSK-SVWEEQPN---KTIPNLYTISALSWKRDGSRIACG 460
+ L A K VW+ + + P+ Y I++++W DG A G
Sbjct: 202 ELI---LSAGEDCKYKVWDSYGHLLYSSQPHEYPITSVAWSGDGELFAVG 248
Score = 49 (22.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 25/102 (24%), Positives = 47/102 (46%)
Query: 450 WKRDGSRIACGGLCGSVELFES--VLKRTI-----------WKGKFE-MIYVSPSQVLVK 495
W +G+ +A G G V+++ +L+ T+ W E ++Y S Q+++K
Sbjct: 115 WNSEGTALATVGEDGQVKIWSKSGMLRSTLAQQGTPVYSVAWGPDSEKVLYTSGKQLIIK 174
Query: 496 PLSGESK------GRGVILKSQYGYEITDVAIM-GND-RYLV 529
PL K G+ILK+ + + ++ + G D +Y V
Sbjct: 175 PLQPNVKLLQWKAHDGLILKTDWN-SVNELILSAGEDCKYKV 215
Score = 48 (22.0 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 608 KKMRLTLLDIRTSEKHNILN 627
K +TL+ RT + HN++N
Sbjct: 307 KNFEITLIKRRTMQVHNVIN 326
>UNIPROTKB|Q9P2H3 [details] [associations]
symbol:IFT80 "Intraflagellar transport protein 80 homolog"
species:9606 "Homo sapiens" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0035085 "cilium axoneme" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:CH471052 eggNOG:COG2319 GO:GO:0005932 GO:GO:0035085
Orphanet:474 EMBL:AK303410 EMBL:AC024221 EMBL:AC079594
EMBL:BC030774 EMBL:BC042027 EMBL:BC101494 EMBL:BC113669
EMBL:AB037795 EMBL:AL133045 IPI:IPI00175647 IPI:IPI00946083
RefSeq:NP_001177170.1 RefSeq:NP_001177171.1 RefSeq:NP_065851.1
UniGene:Hs.478095 ProteinModelPortal:Q9P2H3 SMR:Q9P2H3
IntAct:Q9P2H3 STRING:Q9P2H3 PhosphoSite:Q9P2H3 DMDM:294862504
PaxDb:Q9P2H3 PRIDE:Q9P2H3 DNASU:57560 Ensembl:ENST00000326448
Ensembl:ENST00000483465 GeneID:57560 KEGG:hsa:57560 UCSC:uc003fdb.2
CTD:57560 GeneCards:GC03M159974 HGNC:HGNC:29262 HPA:HPA035868
MIM:611177 MIM:611263 neXtProt:NX_Q9P2H3 Orphanet:93271
PharmGKB:PA142671664 HOGENOM:HOG000256816 HOVERGEN:HBG056828
InParanoid:Q9P2H3 OMA:WSRSGML OrthoDB:EOG4K3KX1 PhylomeDB:Q9P2H3
ChiTaRS:IFT80 GenomeRNAi:57560 NextBio:64058 ArrayExpress:Q9P2H3
Bgee:Q9P2H3 CleanEx:HS_IFT80 Genevestigator:Q9P2H3
GermOnline:ENSG00000068885 Uniprot:Q9P2H3
Length = 777
Score = 126 (49.4 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 69/300 (23%), Positives = 131/300 (43%)
Query: 585 INHDSKIDWLELNETA----HKLLYRDKKMRLTLLDI-RTSEKHNILNYCTFVQWLPGSD 639
++H ++I + L++ K+ + DK L + + R ++ I+ T V L +D
Sbjct: 457 LSHKNEILEIALDQKGLTNDRKIAFIDKNRDLCITSVKRFGKEEQIIKLGTMVHTLAWND 516
Query: 640 ---VVVAQSRHNACVWYNIDTP--DRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYE 694
++ VWY +T DR P D + I++ GN
Sbjct: 517 TCNILCGLQDTRFIVWYYPNTVYVDRDI-LPKTLYERDASEFSKNPHIVSFVGNQVTIRR 575
Query: 695 LDESLIEFGTAVHDS---DFGKAILYLESLGINK--KEAEGMWQNLAEVAIQLHNLHVAE 749
D SL+ + + ++ + + +++ + + KE + MW LA +A+ ++ AE
Sbjct: 576 ADGSLVHISITPYPAILHEYVSSSKWEDAVRLCRFVKE-QTMWACLAAMAVANRDMTTAE 634
Query: 750 ICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLE 809
I YAA+G+I ++ +IK + SKE+ + A + + + + AE + L+
Sbjct: 635 IAYAAIGEIDKVQYIN-SIK--NLPSKESKM----------AHILLFSGNIQEAEIVLLQ 681
Query: 810 NNEIHKAIDMYLKLYKWEDALSLAETNNYEYNELKKKYIKWL-TDTRQEDKAGELYEKEG 868
+++AI + + LY WE AL LA + + K+L T +QE L+ EG
Sbjct: 682 AGLVYQAIQININLYNWERALELAVKYKTHVDTVLAYRQKFLETFGKQETNKRYLHYAEG 741
Score = 110 (43.8 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 47/192 (24%), Positives = 90/192 (46%)
Query: 192 ILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAW 251
IL+AG D +++S GR +++ + PH E T +P G+ VGS+ ++L
Sbjct: 203 ILSAGEDCKYKVWDSYGRP--LYN-SQPH--EHPITSVAWAPDGELFAVGSFHTLRLC-- 255
Query: 252 SPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL-FESVLKRTIWKGK-F 309
K+ W K PN +I ++W DG++IA G CG+ + F V+++ W+ K F
Sbjct: 256 --DKTGWSYALEK--PNTGSIFNIAWSIDGTQIA--GACGNGHVVFAHVVEQH-WEWKNF 308
Query: 310 EMIYVSPSQVLVKPLSGES----KGRGVILKSQYGYEITDVAIMGNDRYLVARTPDTLLL 365
++ + V+ + ++ + R ++K+ Y V+ + +T ++
Sbjct: 309 QVTLTKRRAMQVRNVLNDAVDLLEFRDRVIKASLNYAHLVVSTSLQCYVFSTKNWNTPII 368
Query: 366 GDLHRNLLSEVL 377
DL +S +L
Sbjct: 369 FDLKEGTVSLIL 380
Score = 70 (29.7 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 1252 KYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQ 1311
K A +L +G EAE ++A +AI + I+ +WE A +A ++ T + +L +
Sbjct: 661 KMAHILLFSGNIQEAEIVLLQAGLVYQAIQININLYNWERALELAVKYK-THVDTVLAYR 719
Query: 1312 SKCEFENENFSKFET 1326
K F E F K ET
Sbjct: 720 QK--FL-ETFGKQET 731
Score = 59 (25.8 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 428 KSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL-FESVLKRTIWKGK 481
K+ W K PN +I ++W DG++IA G CG+ + F V+++ W+ K
Sbjct: 257 KTGWSYALEK--PNTGSIFNIAWSIDGTQIA--GACGNGHVVFAHVVEQH-WEWK 306
Score = 58 (25.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 19/92 (20%), Positives = 40/92 (43%)
Query: 73 YKLGDDWGDKKVICNKFIQQCPVTTMVWLADGPIIYGQSDGKIKAAHVKANKTQTLYASN 132
YK+ D +G + + N + P+T++ W DG + S ++ K + L N
Sbjct: 212 YKVWDSYG--RPLYNSQPHEHPITSVAWAPDGELFAVGSFHTLRLCD-KTGWSYALEKPN 268
Query: 133 S-FVVALCLNVRGAGVLSGHADGSIVRYYVTE 163
+ + + ++ G + +G +V +V E
Sbjct: 269 TGSIFNIAWSIDGTQIAGACGNGHVVFAHVVE 300
Score = 56 (24.8 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 37/182 (20%), Positives = 74/182 (40%)
Query: 111 SDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVTEDASNFDQ 170
SDGK +++ A V+A N G +++ DG I + T +
Sbjct: 85 SDGKFHLISKLGRVEKSVEAHCGAVLAGRWNYEGTALVTVGEDGQIKIWSKTGMLRSTLA 144
Query: 171 QQGRVVQHPVPPYALSW-PAG--YILAAGSDRIVTIYESDGRVHRIFDYTAPHYKERE-F 226
QQG P Y+++W P + AG I+ + + +V + +K +
Sbjct: 145 QQG------TPVYSVAWGPDSEKVLYTAGKQLIIKPLQPNAKVLQ--------WKAHDGI 190
Query: 227 TVACSSPSGQAVVVGSYDNIKLFAW-SPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIA 285
+ S +++ + ++ K W S + ++ QP++ + I++++W DG A
Sbjct: 191 ILKVDWNSVNDLILSAGEDCKYKVWDSYGRPLYNSQPHE-----HPITSVAWAPDGELFA 245
Query: 286 CG 287
G
Sbjct: 246 VG 247
Score = 53 (23.7 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 310 EMIYVSPSQVLVKPLSGESK------GRGVILKSQYGYEITDVAIM-GND-RYLVARTPD 361
+++Y + Q+++KPL +K G+ILK + + D+ + G D +Y V +
Sbjct: 161 KVLYTAGKQLIIKPLQPNAKVLQWKAHDGIILKVDWN-SVNDLILSAGEDCKYKVWDSYG 219
Query: 362 TLLLGDL-HRNLLSEVLW-PD 380
L H + ++ V W PD
Sbjct: 220 RPLYNSQPHEHPITSVAWAPD 240
Score = 52 (23.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 29/126 (23%), Positives = 57/126 (45%)
Query: 337 SQYGYEITDVAIMGNDRYLVARTPDT-LLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTVC 395
S+ G + +A G Y VA PD+ +L + L+ + L P++ + D + +
Sbjct: 134 SKTGMLRSTLAQQGTPVYSVAWGPDSEKVLYTAGKQLIIKPLQPNAKVLQWKAHDGIILK 193
Query: 396 LVFNAGELSIIEYGNNEILTCVSIKLFAW-SPSKSVWEEQPNKTIPNLYTISALSWKRDG 454
+ +N+ I+ G + C K W S + ++ QP++ + I++++W DG
Sbjct: 194 VDWNSVNDLILSAGED----C---KYKVWDSYGRPLYNSQPHE-----HPITSVAWAPDG 241
Query: 455 SRIACG 460
A G
Sbjct: 242 ELFAVG 247
>RGD|1312006 [details] [associations]
symbol:Ift80 "intraflagellar transport 80 homolog
(Chlamydomonas)" species:10116 "Rattus norvegicus" [GO:0001649
"osteoblast differentiation" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=IEA;ISO] [GO:0005929 "cilium" evidence=ISO]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IEA;ISO] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0060271 "cilium morphogenesis"
evidence=IEA;ISO] [GO:0060349 "bone morphogenesis"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1312006 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0005932 GO:GO:0035085 CTD:57560 HOGENOM:HOG000256816
HOVERGEN:HBG056828 OrthoDB:EOG4K3KX1 GeneTree:ENSGT00440000033499
EMBL:BC081931 EMBL:BC081937 IPI:IPI00471838 RefSeq:NP_001013933.1
UniGene:Rn.6742 ProteinModelPortal:Q66HB3 STRING:Q66HB3
PRIDE:Q66HB3 Ensembl:ENSRNOT00000013216 GeneID:295106
KEGG:rno:295106 UCSC:RGD:1312006 InParanoid:Q66HB3 NextBio:638989
Genevestigator:Q66HB3 GermOnline:ENSRNOG00000009808 Uniprot:Q66HB3
Length = 777
Score = 122 (48.0 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 66/300 (22%), Positives = 129/300 (43%)
Query: 585 INHDSKIDWLELNETA----HKLLYRDKKMRLTLLDI-RTSEKHNILNYCTFVQ---WLP 636
++H ++I + L++ K+ + DK L + + R ++ I+ T V W
Sbjct: 457 LSHKNEISEVALDQKGLTNDRKIAFIDKNRDLYITSVKRFGKEEQIIKLGTMVHTLAWCD 516
Query: 637 GSDVVVAQSRHNACVWY--NIDTPDRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYE 694
+++ VWY N DR P D + I++ GN
Sbjct: 517 TCNILCGLQDTRFTVWYYPNAVYVDRDI-LPKTLYERDASEYSKNPHIVSFVGNQVTVRR 575
Query: 695 LDESLIEFGTAVHDS---DFGKAILYLESLGINK--KEAEGMWQNLAEVAIQLHNLHVAE 749
D SL+ + + + ++ + + +++ + + KE + +W LA +A+ ++ AE
Sbjct: 576 ADGSLVHISISPYPAILHEYVSSSKWEDAVRLCRFVKE-QSLWACLAAMAVANRDMVTAE 634
Query: 750 ICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLE 809
I YAA+G+I ++ +K ++ S+E+ + A + + + + AE I L+
Sbjct: 635 IAYAAVGEIDKVRYIN-AMK--DLPSRESKM----------AHILMFSGNIQEAETILLQ 681
Query: 810 NNEIHKAIDMYLKLYKWEDALSLAETNNYEYNELKKKYIKWL-TDTRQEDKAGELYEKEG 868
+++AI + + LY WE AL LA + + K+L T +QE L EG
Sbjct: 682 AGLVYQAIQININLYNWERALELAVKYKTHVDTVLAYRQKFLETFGKQETNKRYLQYAEG 741
Score = 114 (45.2 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 38/117 (32%), Positives = 60/117 (51%)
Query: 192 ILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAW 251
IL+AG D +++S GRV ++ + PH E T +P G+ VGS+ ++L
Sbjct: 203 ILSAGEDCKYKVWDSYGRV--LYG-SQPH--EHPITSVAWAPDGELFAVGSFHTLRLC-- 255
Query: 252 SPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL-FESVLK-RTIWK 306
K+ W K PN +I ++W DG++IA G CG+ + F V++ R WK
Sbjct: 256 --DKTGWSYALEK--PNTGSIFNIAWSIDGTQIA--GACGNGHVVFAHVVEQRWEWK 306
Score = 81 (33.6 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 45/170 (26%), Positives = 76/170 (44%)
Query: 1157 YLDCNEWKLAIKMYRSLNLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAVRLLNRLS 1216
++ + + + Y S + WEDA R+ Q LWA L +A+ + NR
Sbjct: 582 HISISPYPAILHEYVSSSKWEDAVRLCRFVKEQS-------LWA-CL---AAMAVANR-D 629
Query: 1217 LLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFNEAETQFIKANKP 1276
++ + I+ A + D ++ I L K A +L +G EAET ++A
Sbjct: 630 MVTAEIAYAA-VGEID---KVRYINAMKDLPSRESKMAHILMFSGNIQEAETILLQAGLV 685
Query: 1277 KEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFENENFSKFET 1326
+AI + I+ +WE A +A ++ T + +L + K F E F K ET
Sbjct: 686 YQAIQININLYNWERALELAVKYK-THVDTVLAYRQK--FL-ETFGKQET 731
Score = 64 (27.6 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 31/128 (24%), Positives = 58/128 (45%)
Query: 277 WKRDGSRIACGGLCGSVELFES--VLKRTI-----------WKGKFE-MIYVSPSQVLVK 322
W +G+ + G G V+++ +L+ T+ W E ++Y + Q+++K
Sbjct: 114 WNYEGTALVTVGEDGQVKIWSKTGMLRSTLAQQGIPVYSVAWGPDSEKVLYTAGKQLIIK 173
Query: 323 PLSGESK------GRGVILKSQYGYEITDVAIM-GND-RYLVARTPDTLLLGDL-HRNLL 373
PL +K G+ILK + + D+ + G D +Y V + +L G H + +
Sbjct: 174 PLQPNAKVLQWKAHDGIILKVDWN-SVNDLILSAGEDCKYKVWDSYGRVLYGSQPHEHPI 232
Query: 374 SEVLW-PD 380
+ V W PD
Sbjct: 233 TSVAWAPD 240
Score = 61 (26.5 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 428 KSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL-FESVLK-RTIWK 479
K+ W K PN +I ++W DG++IA G CG+ + F V++ R WK
Sbjct: 257 KTGWSYALEK--PNTGSIFNIAWSIDGTQIA--GACGNGHVVFAHVVEQRWEWK 306
Score = 58 (25.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 19/92 (20%), Positives = 40/92 (43%)
Query: 73 YKLGDDWGDKKVICNKFIQQCPVTTMVWLADGPIIYGQSDGKIKAAHVKANKTQTLYASN 132
YK+ D +G +V+ + P+T++ W DG + S ++ K + L N
Sbjct: 212 YKVWDSYG--RVLYGSQPHEHPITSVAWAPDGELFAVGSFHTLRLCD-KTGWSYALEKPN 268
Query: 133 S-FVVALCLNVRGAGVLSGHADGSIVRYYVTE 163
+ + + ++ G + +G +V +V E
Sbjct: 269 TGSIFNIAWSIDGTQIAGACGNGHVVFAHVVE 300
Score = 42 (19.8 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 608 KKMRLTLLDIRTSEKHNILNYCTFVQWLPGSDVVVAQSRHNA 649
K ++TL RT + N+LN V L D V+ S ++A
Sbjct: 306 KNFQVTLTKRRTMQVRNVLNDA--VDLLEFRDRVIKASLNHA 345
>UNIPROTKB|F1P3M3 [details] [associations]
symbol:IFT122 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0010172 "embryonic body
morphogenesis" evidence=IEA] [GO:0032391 "photoreceptor connecting
cilium" evidence=IEA] [GO:0035050 "embryonic heart tube
development" evidence=IEA] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA] [GO:0048593 "camera-type eye
morphogenesis" evidence=IEA] [GO:0060271 "cilium morphogenesis"
evidence=IEA] [GO:0060830 "ciliary receptor clustering involved in
smoothened signaling pathway" evidence=IEA] [GO:0060831 "smoothened
signaling pathway involved in dorsal/ventral neural tube
patterning" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0032391 OMA:DSPRDDN GeneTree:ENSGT00390000001016
EMBL:AADN02014524 IPI:IPI00588814 ProteinModelPortal:F1P3M3
Ensembl:ENSGALT00000013770 Uniprot:F1P3M3
Length = 1152
Score = 175 (66.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 82/363 (22%), Positives = 152/363 (41%)
Query: 1089 ENKFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESK 1148
+ KF EA +LY G LA+ M+ + R ++ +R+ A +
Sbjct: 610 QGKFHEAAKLYKKSGRESLALDMYSDLRMFDYAKDFLRSGDPKDTKMLIKKQADWAKNIN 669
Query: 1149 NYKQAEKYYLDCNEWKLAIKMYRSLNLWEDAY-RIA--LSNGGQEAVEPVVYLWAKSLGG 1205
K A + YL E AI++ W D IA L +E + + + K
Sbjct: 670 EPKAAVEMYLSAGEHMKAIEISGDHG-WVDMLIEIARKLDKAEREPLSKCAFYFKKLDNP 728
Query: 1206 DSAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFNE 1265
A ++ L++ +S +T+ ++ AF L++ + K +EV+ YA L +N +F E
Sbjct: 729 GYAAETYMKVGDLKALVSLHVETHHWEEAFALSEKHPEFK-DEVYVPYAQWLAENDRFEE 787
Query: 1266 AETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFENENFSKFE 1325
A+ F KA + +EA+ + Q NA + + + + +L+ + EN +
Sbjct: 788 AQKAFHKAGRQREAVRVL--EQLTHNAV-VESRFNDAAYYYWMLSMQCLDIAQENEEQKT 844
Query: 1326 TLLLRAHKVDLIIEKYKMNHMWNDALRVCGE----YVPSKL----PLLQQEYEKEINTNI 1377
+L + H + E Y H+++ R E ++P L L KE I
Sbjct: 845 EMLQKFHHFQQLAEVY---HVYHYIQRYTEEPFSFHLPETLFNISRFLLHSLTKETPLGI 901
Query: 1378 SKDIHSLITQARQWEQNGEFYNAVECYLKIKNVDVNLMVKILNEVTQLTLKYLNHDQSYK 1437
SK ++L A+Q + G + A Y K++ + + + E+ LT++ S +
Sbjct: 902 SKS-NTLFALAKQSKALGAYKLARHAYDKLQGLQIPARFQKSVELGSLTIRSKPFHDSEE 960
Query: 1438 ILP 1440
++P
Sbjct: 961 LVP 963
Score = 171 (65.3 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 61/249 (24%), Positives = 119/249 (47%)
Query: 918 KAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTAL---EEEWGDHLIENKQY 974
+A ++Y+ + AL+ Y +++D D R +PK+ L + +W ++ E K
Sbjct: 615 EAAKLYKKSGRESLALDMYSDLRMFDYAKDFLRSGDPKDTKMLIKKQADWAKNINEPK-- 672
Query: 975 NAAINHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQH--VKTLAQHFKTVKD 1032
AA+ Y+ AG++ KA++ S W V +L I K D A+ + A +FK + +
Sbjct: 673 -AAVEMYLSAGEHMKAIEIS-GDHGW---VDMLIEIARKLDKAEREPLSKCAFYFKKLDN 727
Query: 1033 YKTAEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIK-ATFIQKCKQLEEENK 1091
A + Y + +V ++ +T WE+A+A++E+H E K ++ + L E ++
Sbjct: 728 PGYAAETYMKVGDLKALVSLHVETHHWEEAFALSEKH---PEFKDEVYVPYAQWLAENDR 784
Query: 1092 FKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRN---YXXXXXXXXXXXXAQECEESK 1148
F+EA++ + G A+ + + Q + +++ N Y AQE EE K
Sbjct: 785 FEEAQKAFHKAGRQREAVRVLE-QLTHNAVVESRFNDAAYYYWMLSMQCLDIAQENEEQK 843
Query: 1149 NYKQAEKYY 1157
+ +K++
Sbjct: 844 T-EMLQKFH 851
Score = 63 (27.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 34/135 (25%), Positives = 56/135 (41%)
Query: 168 FDQQQGRVVQ----HPVPPYALSWPA-GYILAAGS-DRIVTIYESDGRVHRIFDYTAPHY 221
+D G ++Q H Y +++ G A+GS D+ V I+ S ++ I YT H
Sbjct: 4 YDTSDGTLIQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTS--KLEGILKYT--HN 59
Query: 222 KEREFTVACSSPSGQAVVVGSYDNIKLFAWSPS-KSVWEEQPNKTIPNLYTISALSWKRD 280
++ C S + + S + WSP KSV + + I + SW D
Sbjct: 60 D----SIQCVSYNPLTHQLASCSSSDFGLWSPEQKSVSKHKAGSKI------TCCSWTND 109
Query: 281 GSRIACGGLCGSVEL 295
G +A G G + +
Sbjct: 110 GQYLALGMFNGVISI 124
Score = 59 (25.8 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 29/121 (23%), Positives = 55/121 (45%)
Query: 359 TPDTLLLGDL--HRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGELS-IIEYGNNEILT 415
T D L+ L H++ + V + G+ +F + ++ +L I++Y +N+ +
Sbjct: 6 TSDGTLIQPLKGHKDTVYCVAYAKDGK--RFASGSADKSVIIWTSKLEGILKYTHNDSIQ 63
Query: 416 CVSI-----KLFAWSPSK-SVWE-EQPNKTIPNLYT-ISALSWKRDGSRIACGGLCGSVE 467
CVS +L + S S +W EQ + + + I+ SW DG +A G G +
Sbjct: 64 CVSYNPLTHQLASCSSSDFGLWSPEQKSVSKHKAGSKITCCSWTNDGQYLALGMFNGVIS 123
Query: 468 L 468
+
Sbjct: 124 I 124
Score = 51 (23.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 32/139 (23%), Positives = 55/139 (39%)
Query: 79 WGDKKVICNKFIQQCPVTTMVWLADGPII-YGQSDGKIKAAHVKAN---KTQTLYASNSF 134
W ++ +K +T W DG + G +G I + + K + A +S
Sbjct: 85 WSPEQKSVSKHKAGSKITCCSWTNDGQYLALGMFNGVISIRNKNGDEKVKIERTGAGSSP 144
Query: 135 VVALCLNVRG--AGVLSGHAD-GSIVRYYVTEDASNFDQQQGRVVQHPVPPYALSW-PAG 190
+ ++C N AD G + +Y +Q G+ P +S+ G
Sbjct: 145 IWSICWNPSRDERNDTLAVADWGQRLSFYQLSG-----KQIGKDRMLNFDPCCVSYFTKG 199
Query: 191 -YILAAGSDRIVTIYESDG 208
YIL GSD+ V+++ DG
Sbjct: 200 EYILLGGSDKQVSLFTKDG 218
Score = 45 (20.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 271 TISALSWKRDGSRIACGGLCGSVELFESVLK 301
T+ +++ +DG R A G SV ++ S L+
Sbjct: 21 TVYCVAYAKDGKRFASGSADKSVIIWTSKLE 51
Score = 45 (20.9 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 444 TISALSWKRDGSRIACGGLCGSVELFESVLK 474
T+ +++ +DG R A G SV ++ S L+
Sbjct: 21 TVYCVAYAKDGKRFASGSADKSVIIWTSKLE 51
Score = 43 (20.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 40 GQNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKL 75
G G +S V PDS +AV D I Y+L
Sbjct: 222 GTIGEQSSWVWTCRAKPDSNYVAVGCQDGTIAFYQL 257
Score = 40 (19.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 44 RKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKL 75
++S V+ L S KLAV ++ +Y +
Sbjct: 419 KQSTAVRCLDMSASRNKLAVVDENDTCLVYDI 450
>UNIPROTKB|A8WGF4 [details] [associations]
symbol:ift122 "Intraflagellar transport protein 122
homolog" species:8364 "Xenopus (Silurana) tropicalis" [GO:0030991
"intraflagellar transport particle A" evidence=ISS] [GO:0035721
"intraflagellar retrograde transport" evidence=ISS] [GO:0045879
"negative regulation of smoothened signaling pathway" evidence=ISS]
[GO:0072372 "primary cilium" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005929 eggNOG:COG2319 Gene3D:1.25.40.10
GO:GO:0005932 GO:GO:0030030 CTD:55764 HOVERGEN:HBG069969
HOGENOM:HOG000261131 EMBL:BC154689 RefSeq:NP_001106492.1
UniGene:Str.37347 ProteinModelPortal:A8WGF4 STRING:A8WGF4
GeneID:100127681 KEGG:xtr:100127681 Xenbase:XB-GENE-966865
Uniprot:A8WGF4
Length = 1189
Score = 162 (62.1 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 47/198 (23%), Positives = 97/198 (48%)
Query: 918 KAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAA 977
+A ++Y+ + +AL+ Y ++++ + +PK+ L + D ++ A
Sbjct: 655 EAAKLYKKAGQESRALDMYTDLRMFEFAKEFLGSGDPKDTKTLITKQADWARNIREPRTA 714
Query: 978 INHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQHVKTL--AQHFKTVKDYKT 1035
Y+ AG+N KA++ S W V +L I K D A+ L A +FK ++ +
Sbjct: 715 AEMYLSAGENMKAIELS-GDHGW---VDMLIEIARKLDKAEREPLLKCAYYFKKLQHHGY 770
Query: 1036 AEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEA 1095
A + Y + +V +Y +T +WE+A+A+ E++ + +I + L E ++F+EA
Sbjct: 771 AAETYMKIGDLKALVRLYVETQRWEEAFALVEKNPEYKD--EVYIPYAQWLAEHDRFEEA 828
Query: 1096 ERLYLIIGEPDLAISMFK 1113
++ + G D A+ + +
Sbjct: 829 QKAFHKAGRQDEAVRVLE 846
Score = 159 (61.0 bits), Expect = 3.7e-09, Sum P(4) = 3.7e-09
Identities = 78/363 (21%), Positives = 150/363 (41%)
Query: 1089 ENKFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESK 1148
+ KF EA +LY G+ A+ M+ + R +E + + + A +
Sbjct: 650 QGKFHEAAKLYKKAGQESRALDMYTDLRMFEFAKEFLGSGDPKDTKTLITKQADWARNIR 709
Query: 1149 NYKQAEKYYLDCNEWKLAIKMYRSLNLWEDAY-RIA--LSNGGQEAVEPVVYLWAKSLGG 1205
+ A + YL E AI++ W D IA L +E + Y + K
Sbjct: 710 EPRTAAEMYLSAGENMKAIELSGDHG-WVDMLIEIARKLDKAEREPLLKCAYYFKKLQHH 768
Query: 1206 DSAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFNE 1265
A ++ L++ + +T +++ AF L + + K +EV+ YA L ++ +F E
Sbjct: 769 GYAAETYMKIGDLKALVRLYVETQRWEEAFALVEKNPEYK-DEVYIPYAQWLAEHDRFEE 827
Query: 1266 AETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFENENFSKFE 1325
A+ F KA + EA+ + Q NA + + + + +L+ E + K +
Sbjct: 828 AQKAFHKAGRQDEAVRVL--EQLTHNAV-VESRFNDAAYYYWMLSMQCLEISKDKEEKQD 884
Query: 1326 TLLLRAHKVDLIIEKYKMNHMWNDALRVCGEYVPSKLP--------LLQQEYEKEINTNI 1377
+L + + + E Y H+++ R E S LP L KE I
Sbjct: 885 AMLQKFYHFQHLAELY---HVYHSIHRYTDEPFSSHLPETLFNISRFLLHSLTKESPLGI 941
Query: 1378 SKDIHSLITQARQWEQNGEFYNAVECYLKIKNVDVNLMVKILNEVTQLTLKYLNHDQSYK 1437
SK +++L T A+Q + G + A + Y +++ + + E+ +T++ S +
Sbjct: 942 SK-VNTLFTLAKQSKALGAYKLARQVYERLQGLRIPSRFLESIELGSITIRSKPFHDSEE 1000
Query: 1438 ILP 1440
++P
Sbjct: 1001 LIP 1003
Score = 115 (45.5 bits), Expect = 9.8e-05, Sum P(4) = 9.8e-05
Identities = 48/228 (21%), Positives = 99/228 (43%)
Query: 1368 EYEKE-INTNISKDIHSLITQARQWEQN-GEFYNAVECYLK----IKNVDVNLMVKILNE 1421
E+ KE + + KD +LIT+ W +N E A E YL +K ++++ ++
Sbjct: 680 EFAKEFLGSGDPKDTKTLITKQADWARNIREPRTAAEMYLSAGENMKAIELSGDHGWVDM 739
Query: 1422 VTQLTLKYLNHDQSYKILPSLVPKLMEFKQYDLAVRVYLNIDMVKEAVDIFIYTQNWNKA 1481
+ ++ K L+ + +L + + + A Y+ I +K V +++ TQ W +A
Sbjct: 740 LIEIARK-LDKAEREPLLKCAY-YFKKLQHHGYAAETYMKIGDLKALVRLYVETQRWEEA 797
Query: 1482 RKLCAELKPEYLSYVENQYKEWLKKNGDADMLSEIDINTALD----MLMKQGQWNQCLDK 1537
L E PEY V Y +WL ++ + + +++Q N ++
Sbjct: 798 FAL-VEKNPEYKDEVYIPYAQWLAEHDRFEEAQKAFHKAGRQDEAVRVLEQLTHNAVVES 856
Query: 1538 AKNINTNLLHKYMALYAMHLIKNKEYAQLTQLFNEYGTPNIPQFYNIY 1585
N + + +++ + + K+KE Q L Y ++ + Y++Y
Sbjct: 857 RFN-DAAYYYWMLSMQCLEISKDKEEKQDAMLQKFYHFQHLAELYHVY 903
Score = 77 (32.2 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 33/136 (24%), Positives = 63/136 (46%)
Query: 344 TDVAIMGNDRYLVARTPDTLLLGDL--HRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAG 401
T + + +R LV T D ++ L H++ + V + G+ +F + ++
Sbjct: 31 TQLIVAAGNRVLVYDTSDGTMIQPLKGHKDTVYCVAYAKDGK--RFASGSADKSVIIWTS 88
Query: 402 ELS-IIEYGNNEILTCVSI-----KLFAWSPSK-SVWE-EQPNKTIPNLYT-ISALSWKR 452
+L I++Y +N+ + CVS +L + S S +W EQ + + + + I+ SW
Sbjct: 89 KLEGILKYTHNDSIQCVSYNPVTHQLASCSSSDFGLWSPEQKSVSKHKVSSKITCCSWTN 148
Query: 453 DGSRIACGGLCGSVEL 468
DG +A G G V +
Sbjct: 149 DGQYLALGMFNGVVSI 164
Score = 67 (28.6 bits), Expect = 1.8e-09, Sum P(4) = 1.8e-09
Identities = 39/147 (26%), Positives = 61/147 (41%)
Query: 152 ADGSIVRYYVTEDASNFDQQQGRVVQHPVPPYALSWPA-GYILAAGS-DRIVTIYESDGR 209
A G+ V Y T D + +G H Y +++ G A+GS D+ V I+ S +
Sbjct: 36 AAGNRVLVYDTSDGTMIQPLKG----HKDTVYCVAYAKDGKRFASGSADKSVIIWTS--K 89
Query: 210 VHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAWSPS-KSVWEEQPNKTIPN 268
+ I YT H ++ C S + + S + WSP KSV + + + I
Sbjct: 90 LEGILKYT--HND----SIQCVSYNPVTHQLASCSSSDFGLWSPEQKSVSKHKVSSKI-- 141
Query: 269 LYTISALSWKRDGSRIACGGLCGSVEL 295
+ SW DG +A G G V +
Sbjct: 142 ----TCCSWTNDGQYLALGMFNGVVSI 164
Score = 57 (25.1 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 191 YILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACS-SPSGQAVVVGSYDNIKLF 249
YI+ +GSD+ V+++ DG R+ P ++ + C P VV+G D F
Sbjct: 241 YIIVSGSDKQVSLFTKDGV--RL----GPIGEQNSWVWTCRVKPDSNYVVIGCQDGTLAF 294
Score = 55 (24.4 bits), Expect = 1.8e-09, Sum P(4) = 1.8e-09
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 52 LAFSPDSTKLAVAQSDNIIFIYKLGD 77
LAF PD T+L VA + N + +Y D
Sbjct: 24 LAFKPDGTQLIVA-AGNRVLVYDTSD 48
Score = 53 (23.7 bits), Expect = 3.5e-07, Sum P(3) = 3.5e-07
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 233 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS 292
P G ++V + + + ++ S + QP K + T+ +++ +DG R A G S
Sbjct: 28 PDGTQLIVAAGNRVLVYDTSDGTMI---QPLKGHKD--TVYCVAYAKDGKRFASGSADKS 82
Query: 293 VELFESVLK 301
V ++ S L+
Sbjct: 83 VIIWTSKLE 91
Score = 49 (22.3 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 647 HNACVWYNIDTPDRITQFP 665
HN C+ Y+I T D + Q P
Sbjct: 482 HNTCLVYDITTKDLLFQEP 500
Score = 45 (20.9 bits), Expect = 2.6e-07, Sum P(4) = 2.6e-07
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 444 TISALSWKRDGSRIACGGLCGSVELFESVLK 474
T+ +++ +DG R A G SV ++ S L+
Sbjct: 61 TVYCVAYAKDGKRFASGSADKSVIIWTSKLE 91
Score = 41 (19.5 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 20/71 (28%), Positives = 28/71 (39%)
Query: 5 KYTDVSSNVLQDDVFNLDIVRLRSEGNVAGIWAWRGQNGRKSYVVKGLAFSPDSTKLAVA 64
+Y VS + Q +F D VRL G W W + VK PDS + +
Sbjct: 240 EYIIVSGSDKQVSLFTKDGVRLGPIGE-QNSWVWTCR-------VK-----PDSNYVVIG 286
Query: 65 QSDNIIFIYKL 75
D + Y+L
Sbjct: 287 CQDGTLAFYQL 297
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 49 VKGLAFSPDSTKLAVAQSDNIIFIYKL 75
V+ L S KLAV N +Y +
Sbjct: 464 VRCLDMSASRNKLAVVDEHNTCLVYDI 490
>UNIPROTKB|H3BRJ5 [details] [associations]
symbol:H3BRJ5 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR000315 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00643 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50119 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Prosite:PS00518 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AC112641 EMBL:AC024221
EMBL:AC079594 ProteinModelPortal:H3BRJ5 SMR:H3BRJ5 PRIDE:H3BRJ5
Ensembl:ENST00000483754 Bgee:H3BRJ5 Uniprot:H3BRJ5
Length = 948
Score = 126 (49.4 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 69/300 (23%), Positives = 131/300 (43%)
Query: 585 INHDSKIDWLELNETA----HKLLYRDKKMRLTLLDI-RTSEKHNILNYCTFVQWLPGSD 639
++H ++I + L++ K+ + DK L + + R ++ I+ T V L +D
Sbjct: 628 LSHKNEILEIALDQKGLTNDRKIAFIDKNRDLCITSVKRFGKEEQIIKLGTMVHTLAWND 687
Query: 640 ---VVVAQSRHNACVWYNIDTP--DRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYE 694
++ VWY +T DR P D + I++ GN
Sbjct: 688 TCNILCGLQDTRFIVWYYPNTVYVDRDI-LPKTLYERDASEFSKNPHIVSFVGNQVTIRR 746
Query: 695 LDESLIEFGTAVHDS---DFGKAILYLESLGINK--KEAEGMWQNLAEVAIQLHNLHVAE 749
D SL+ + + ++ + + +++ + + KE + MW LA +A+ ++ AE
Sbjct: 747 ADGSLVHISITPYPAILHEYVSSSKWEDAVRLCRFVKE-QTMWACLAAMAVANRDMTTAE 805
Query: 750 ICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLE 809
I YAA+G+I ++ +IK + SKE+ + A + + + + AE + L+
Sbjct: 806 IAYAAIGEIDKVQYIN-SIK--NLPSKESKM----------AHILLFSGNIQEAEIVLLQ 852
Query: 810 NNEIHKAIDMYLKLYKWEDALSLAETNNYEYNELKKKYIKWL-TDTRQEDKAGELYEKEG 868
+++AI + + LY WE AL LA + + K+L T +QE L+ EG
Sbjct: 853 AGLVYQAIQININLYNWERALELAVKYKTHVDTVLAYRQKFLETFGKQETNKRYLHYAEG 912
Score = 110 (43.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 47/192 (24%), Positives = 90/192 (46%)
Query: 192 ILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAW 251
IL+AG D +++S GR +++ + PH E T +P G+ VGS+ ++L
Sbjct: 374 ILSAGEDCKYKVWDSYGRP--LYN-SQPH--EHPITSVAWAPDGELFAVGSFHTLRLC-- 426
Query: 252 SPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL-FESVLKRTIWKGK-F 309
K+ W K PN +I ++W DG++IA G CG+ + F V+++ W+ K F
Sbjct: 427 --DKTGWSYALEK--PNTGSIFNIAWSIDGTQIA--GACGNGHVVFAHVVEQH-WEWKNF 479
Query: 310 EMIYVSPSQVLVKPLSGES----KGRGVILKSQYGYEITDVAIMGNDRYLVARTPDTLLL 365
++ + V+ + ++ + R ++K+ Y V+ + +T ++
Sbjct: 480 QVTLTKRRAMQVRNVLNDAVDLLEFRDRVIKASLNYAHLVVSTSLQCYVFSTKNWNTPII 539
Query: 366 GDLHRNLLSEVL 377
DL +S +L
Sbjct: 540 FDLKEGTVSLIL 551
Score = 70 (29.7 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 1252 KYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQ 1311
K A +L +G EAE ++A +AI + I+ +WE A +A ++ T + +L +
Sbjct: 832 KMAHILLFSGNIQEAEIVLLQAGLVYQAIQININLYNWERALELAVKYK-THVDTVLAYR 890
Query: 1312 SKCEFENENFSKFET 1326
K F E F K ET
Sbjct: 891 QK--FL-ETFGKQET 902
Score = 59 (25.8 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 428 KSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL-FESVLKRTIWKGK 481
K+ W K PN +I ++W DG++IA G CG+ + F V+++ W+ K
Sbjct: 428 KTGWSYALEK--PNTGSIFNIAWSIDGTQIA--GACGNGHVVFAHVVEQH-WEWK 477
Score = 58 (25.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 19/92 (20%), Positives = 40/92 (43%)
Query: 73 YKLGDDWGDKKVICNKFIQQCPVTTMVWLADGPIIYGQSDGKIKAAHVKANKTQTLYASN 132
YK+ D +G + + N + P+T++ W DG + S ++ K + L N
Sbjct: 383 YKVWDSYG--RPLYNSQPHEHPITSVAWAPDGELFAVGSFHTLRLCD-KTGWSYALEKPN 439
Query: 133 S-FVVALCLNVRGAGVLSGHADGSIVRYYVTE 163
+ + + ++ G + +G +V +V E
Sbjct: 440 TGSIFNIAWSIDGTQIAGACGNGHVVFAHVVE 471
Score = 53 (23.7 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 310 EMIYVSPSQVLVKPLSGESK------GRGVILKSQYGYEITDVAIM-GND-RYLVARTPD 361
+++Y + Q+++KPL +K G+ILK + + D+ + G D +Y V +
Sbjct: 332 KVLYTAGKQLIIKPLQPNAKVLQWKAHDGIILKVDWN-SVNDLILSAGEDCKYKVWDSYG 390
Query: 362 TLLLGDL-HRNLLSEVLW-PD 380
L H + ++ V W PD
Sbjct: 391 RPLYNSQPHEHPITSVAWAPD 411
>RGD|1564116 [details] [associations]
symbol:Wdr35 "WD repeat domain 35" species:10116 "Rattus
norvegicus" [GO:0005813 "centrosome" evidence=ISO;ISS] [GO:0005932
"microtubule basal body" evidence=ISO;ISS] [GO:0030991
"intraflagellar transport particle A" evidence=ISO;ISS] [GO:0035085
"cilium axoneme" evidence=ISO;ISS] [GO:0042384 "cilium assembly"
evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005932 GO:GO:0042384
GO:GO:0035085 EMBL:CH473947 eggNOG:NOG263340 HOGENOM:HOG000255527
HOVERGEN:HBG079343 InterPro:IPR017233 PIRSF:PIRSF037536
EMBL:EF613262 IPI:IPI00854039 RefSeq:NP_001092810.1
UniGene:Rn.14574 ProteinModelPortal:A6N6J5 GeneID:503018
KEGG:rno:503018 CTD:503018 RGD:1306545 NextBio:713094
Genevestigator:A6N6J5 Uniprot:A6N6J5
Length = 1170
Score = 133 (51.9 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 60/262 (22%), Positives = 124/262 (47%)
Query: 731 MWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELW 790
+W+ LAE A+Q +L+ A+ + D F++ ++G + S+ ++ E+
Sbjct: 687 LWRLLAEAALQKLDLYTAQQAFVRCKDYQGIKFVK---RLGNLQSES------MKQAEVI 737
Query: 791 ARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAETNNYEYNE--LKKKYI 848
A +F+ AE +YL+ + AI + LKL W L L +T + + ++ L++ +
Sbjct: 738 AYFG----RFEEAERMYLDMDRRDLAIGLRLKLGDWFRVLQLLKTGSGDADDSLLEQAHN 793
Query: 849 K---WLTDTRQEDKAGELYEKEGDHQTALN--YYLKANFTSKACNLVQNEPYLLENHDVV 903
+ D ++ A + Y K G +Q L YY+ ++ NL + P ENH ++
Sbjct: 794 AIGDYFADRQKWMNAVQYYVK-GRNQERLAECYYMLEDYEGLE-NLANSLP---ENHKLL 848
Query: 904 SQIVKGLIKNESYIKAGQIYEFTNENEKALE-CYRKGKVYDKCIDLTRKINPKNVTALEE 962
+I + ++ +A + N+ + A++ C + ++K ++L + + K + +L
Sbjct: 849 PEIAQMFVRVGMCEQAVSAFLKCNQPKAAVDTCVHLNQ-WNKAVELAKSHSMKEIGSLLA 907
Query: 963 EWGDHLIENKQYNAAINHYIEA 984
+ HL+E + AI Y +A
Sbjct: 908 RYASHLLEKNKTLDAIELYRKA 929
Score = 115 (45.5 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 57/242 (23%), Positives = 98/242 (40%)
Query: 1150 YKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAV 1209
+++AE+ YLD + LAI + L W ++ L G +A + ++ ++G A
Sbjct: 743 FEEAERMYLDMDRRDLAIGLRLKLGDWFRVLQL-LKTGSGDADDSLLEQAHNAIGDYFAD 801
Query: 1210 RL--LNRLSLLESCISNA--CDTYQFDFAFELAKIGMKSKLEEVHY---KYALVLEDNGQ 1262
R +N + + + Y +E + + + L E H + A + G
Sbjct: 802 RQKWMNAVQYYVKGRNQERLAECYYMLEDYEGLE-NLANSLPENHKLLPEIAQMFVRVGM 860
Query: 1263 FNEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFE-NENF 1321
+A + F+K N+PK A+ +H W A +A H IG +L + E N+
Sbjct: 861 CEQAVSAFLKCNQPKAAVDTCVHLNQWNKAVELAKSHSMKEIGSLLARYASHLLEKNKTL 920
Query: 1322 SKFETLLLRAHKVDLIIEKYKMNH----MWNDALRVCGEYVPSKLPLLQQEYEKEINTNI 1377
E ++ D YK+ LRV YV S L L++Q +E+ N
Sbjct: 921 DAIELYRKASYFFDAAKLMYKIADEEAKKRTKPLRVKKLYVLSAL-LIEQYHEQMKNAQR 979
Query: 1378 SK 1379
K
Sbjct: 980 GK 981
Score = 100 (40.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 68/340 (20%), Positives = 137/340 (40%)
Query: 799 QFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAETNNYEYNELKKKYIKWLTDTRQED 858
+F+ AE +YL+ + AI + LKL W L L +T + + ++ L + + +
Sbjct: 742 RFEEAERMYLDMDRRDLAIGLRLKLGDWFRVLQLLKTGSGDADDS-------LLE-QAHN 793
Query: 859 KAGELYEKEGDHQTALNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVKGLIKNESYI- 917
G+ + A+ YY+K + Y+LE+++ + + L +N +
Sbjct: 794 AIGDYFADRQKWMNAVQYYVKGRNQERLAECY----YMLEDYEGLENLANSLPENHKLLP 849
Query: 918 KAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAA 977
+ Q++ E+A+ + K +D +N N A+E + E A
Sbjct: 850 EIAQMFVRVGMCEQAVSAFLKCNQPKAAVDTCVHLNQWN-KAVELAKSHSMKEIGSLLAR 908
Query: 978 I-NHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTA 1036
+H +E K A++ KA + A +++ I +++ K + + K Y +
Sbjct: 909 YASHLLEKNKTLDAIELYRKASYFFDAAKLMYKIADEE-----AKKRTKPLRVKKLYVLS 963
Query: 1037 EKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAE 1096
+ HEQ+ + Q G+ + + A L G ++ + + + N ++ AE
Sbjct: 964 ALLIEQ--YHEQMKNA--QRGKVKGKNSEATSAL-AGLLEEEVLSTTSRFTD-NAWRGAE 1017
Query: 1097 RLYLII--------GEPDLAISMFKNQRQYENMIKLVRNY 1128
+ I G D A+ + R YE++I V Y
Sbjct: 1018 AYHFFILAQRQLYEGYVDTALKTALHLRDYEDIIPSVEIY 1057
Score = 99 (39.9 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 54/193 (27%), Positives = 88/193 (45%)
Query: 34 GIWAWRGQNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDD--WGDKKVICNKFIQ 91
G W N R VV+ ++++ D K+ + D + + + + WG K + K IQ
Sbjct: 103 GSWYEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIWG-KDL---KGIQ 158
Query: 92 QCPVTTMVWLADGPII-YGQSDGKIKAAHVKANKTQTLYASNSFVVAL---CL-NVRGAG 146
C VT W AD I+ +G ++G+I H+ N+ +F++ + CL NV GA
Sbjct: 159 LCHVT---WSADSKILLFGMANGEI---HIYDNQ-------GNFIMKMKLNCLVNVTGAI 205
Query: 147 VLSGHADGSIVRYYVTED----ASNFDQQQGRVVQH-----PV----PPYA--LSWP-AG 190
++G YV D A FD + ++++H PV Y + W G
Sbjct: 206 SIAGIHWYHGTEGYVEPDCPCLAICFDNGRCQIMRHENDQNPVLIDTGMYVVGIQWNHIG 265
Query: 191 YILA-AGSDRIVT 202
+LA AGS ++VT
Sbjct: 266 SVLAVAGSQKVVT 278
Score = 98 (39.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 57/277 (20%), Positives = 113/277 (40%)
Query: 787 PELW---ARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWE-DALSLAETNNY--EY 840
P LW A A+ A+ ++ + ++ I +L + +++ AE Y +
Sbjct: 685 PRLWRLLAEAALQKLDLYTAQQAFVRCKD-YQGIKFVKRLGNLQSESMKQAEVIAYFGRF 743
Query: 841 NELKKKYIKWLTDTRQEDKAGELYEKEGDHQTALNYYLKANFTSKACNLVQNEPYLLENH 900
E ++ Y+ D + D A L K GD L LK + A ++ L + H
Sbjct: 744 EEAERMYL----DMDRRDLAIGLRLKLGDWFRVLQL-LKTG-SGDA-----DDSLLEQAH 792
Query: 901 DVVSQIVKGLIKNESYIKAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTAL 960
+ + + ++ A Q Y E+ ECY + Y+ +L + P+N L
Sbjct: 793 NAIGDY---FADRQKWMNAVQYYVKGRNQERLAECYYMLEDYEGLENLANSL-PENHKLL 848
Query: 961 EEEWGDHLIENKQYNAAINHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQD---IA 1017
E + A++ +++ + A+DT + QW KAV++ + + K+ +A
Sbjct: 849 PEI-AQMFVRVGMCEQAVSAFLKCNQPKAAVDTCVHLNQWNKAVELAKSHSMKEIGSLLA 907
Query: 1018 QHVKTLAQHFKT---VKDYKTAEKIYSHCDMHEQIVD 1051
++ L + KT ++ Y+ A + + +I D
Sbjct: 908 RYASHLLEKNKTLDAIELYRKASYFFDAAKLMYKIAD 944
Score = 63 (27.2 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 266 IPNLYTISALSWKRDGSRIACGGLCGSVEL 295
+PN + +SW +D IACGG G +++
Sbjct: 11 VPNNVKLKCISWNKDQGFIACGGEDGLLKV 40
Score = 63 (27.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 439 IPNLYTISALSWKRDGSRIACGGLCGSVEL 468
+PN + +SW +D IACGG G +++
Sbjct: 11 VPNNVKLKCISWNKDQGFIACGGEDGLLKV 40
Score = 59 (25.8 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 22/68 (32%), Positives = 29/68 (42%)
Query: 242 SYDNIKLFAWSPSKSVW-EEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVL 300
S N + W K W EE N N + ++SW DG +I G+V + SV
Sbjct: 89 SDQNGLIIVWMLYKGSWYEEMINNR--NKSVVRSMSWNADGQKICIVYEDGAV-IVGSVD 145
Query: 301 KRTIWKGK 308
IW GK
Sbjct: 146 GNRIW-GK 152
Score = 58 (25.5 bits), Expect = 3.9e-06, Sum P(3) = 3.9e-06
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 421 LFAWSPSKSVW-EEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWK 479
+ W K W EE N N + ++SW DG +I G+V + SV IW
Sbjct: 95 IIVWMLYKGSWYEEMINNR--NKSVVRSMSWNADGQKICIVYEDGAV-IVGSVDGNRIW- 150
Query: 480 GK 481
GK
Sbjct: 151 GK 152
Score = 37 (18.1 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 1149 NYKQAEKYYLDCNEWKLAI 1167
N +KY LDC +L++
Sbjct: 522 NVALIQKYSLDCRACQLSL 540
>UNIPROTKB|F1MG59 [details] [associations]
symbol:Bt.37431 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060831 "smoothened signaling pathway involved in
dorsal/ventral neural tube patterning" evidence=IEA] [GO:0060830
"ciliary receptor clustering involved in smoothened signaling
pathway" evidence=IEA] [GO:0060271 "cilium morphogenesis"
evidence=IEA] [GO:0048593 "camera-type eye morphogenesis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IEA] [GO:0010172 "embryonic body morphogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 Gene3D:1.25.40.10
GO:GO:0001843 GO:GO:0009953 GO:GO:0042733 GO:GO:0010172
GO:GO:0048593 GO:GO:0032391 GO:GO:0060271 GO:GO:0035050 OMA:DSPRDDN
GeneTree:ENSGT00390000001016 EMBL:DAAA02054571 EMBL:DAAA02054572
EMBL:DAAA02054573 IPI:IPI00694118 UniGene:Bt.106655
ProteinModelPortal:F1MG59 Ensembl:ENSBTAT00000036487 Uniprot:F1MG59
Length = 1241
Score = 153 (58.9 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 50/202 (24%), Positives = 100/202 (49%)
Query: 918 KAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTAL---EEEWGDHLIENKQY 974
+A ++Y+ + AL+ Y + ++++ D +PK L + +W ++ E K
Sbjct: 708 EAAKLYKRSGHENLALDMYTELRMFEYAKDFLGSEDPKETKMLITKQADWARNINEPK-- 765
Query: 975 NAAINHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQHVKTL--AQHFKTVKD 1032
AA+ YI AG++ KA++ S + W V +L I K D A+ L A FK + +
Sbjct: 766 -AAVEMYISAGEHCKAIEISGE-HGW---VDMLIDIARKLDKAEREPLLMCAHFFKKLDN 820
Query: 1033 YKTAEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKAT-FIQKCKQLEEENK 1091
A + Y + +V ++ +T +W++A+A+ E+H E K ++ + L E ++
Sbjct: 821 PGYAAETYLKIGDLKSLVQLHVETQRWDEAFALGEKH---PEFKDDIYVPYAQWLAENDR 877
Query: 1092 FKEAERLYLIIGEPDLAISMFK 1113
F+EA++ + G A+ + +
Sbjct: 878 FEEAQKAFHKAGRQGEAVRVLE 899
Score = 149 (57.5 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 78/360 (21%), Positives = 146/360 (40%)
Query: 1089 ENKFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESK 1148
+ KF EA +LY G +LA+ M+ R +E + + A
Sbjct: 703 QGKFHEAAKLYKRSGHENLALDMYTELRMFEYAKDFLGSEDPKETKMLITKQADWARNIN 762
Query: 1149 NYKQAEKYYLDCNEWKLAIKMYRSLNLWEDAY-RIA--LSNGGQEAVEPVVYLWAKSLGG 1205
K A + Y+ E AI++ W D IA L +E + + + K
Sbjct: 763 EPKAAVEMYISAGEHCKAIEISGEHG-WVDMLIDIARKLDKAEREPLLMCAHFFKKLDNP 821
Query: 1206 DSAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFNE 1265
A ++ L+S + +T ++D AF L + + K ++++ YA L +N +F E
Sbjct: 822 GYAAETYLKIGDLKSLVQLHVETQRWDEAFALGEKHPEFK-DDIYVPYAQWLAENDRFEE 880
Query: 1266 AETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFENENFSKFE 1325
A+ F KA + EA+ + Q NA + + + +L+ + + K E
Sbjct: 881 AQKAFHKAGRQGEAVRVL--EQLTHNAV-VESRFSDAAYYYWMLSMQCLDIAQDPAQK-E 936
Query: 1326 TLLLRAHKVDLIIEKYKMNHMWNDALRVCGEY-VPSKL----PLLQQEYEKEINTNISKD 1380
+L + H + E Y H+ + + + +P L L K+ ISK
Sbjct: 937 VMLSKFHHFQHLAELYHGYHVIHRYVEEPFSFHLPETLFNISRFLLHSLTKDTPLGISK- 995
Query: 1381 IHSLITQARQWEQNGEFYNAVECYLKIKNVDVNLMVKILNEVTQLTLKYLNHDQSYKILP 1440
+++L T A+Q + G + A Y K++ + + + E+ LT++ S +++P
Sbjct: 996 VNTLFTLAKQSKALGAYKLARHAYDKLQGLQIPARFQKSIELGSLTIRSKPFHDSEELVP 1055
Score = 79 (32.9 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 33/136 (24%), Positives = 60/136 (44%)
Query: 344 TDVAIMGNDRYLVARTPDTLLLGDL--HRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAG 401
T + + +R LV T D LL L H++ + V + G+ +F + ++
Sbjct: 25 TQLIVAAGNRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGK--RFASGSADKSVIIWTS 82
Query: 402 ELS-IIEYGNNEILTCVSI-----KLFAWSPSK-SVWEEQPNKTIPNLYT--ISALSWKR 452
+L I++Y +N+ + CVS +L + S S +W + + + I+ SW
Sbjct: 83 KLEGILKYTHNDSIQCVSYNPITHQLASCSSSDIGLWSPEQKSVSKHKSSSKITCCSWTN 142
Query: 453 DGSRIACGGLCGSVEL 468
DG +A G G V +
Sbjct: 143 DGQYLALGMFNGVVSI 158
Score = 65 (27.9 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 38/147 (25%), Positives = 62/147 (42%)
Query: 152 ADGSIVRYYVTEDASNFDQQQGRVVQHPVPPYALSWPA-GYILAAGS-DRIVTIYESDGR 209
A G+ + Y T D + +G H Y +++ G A+GS D+ V I+ S +
Sbjct: 30 AAGNRLLVYDTSDGTLLQPLKG----HKDTVYCVAYAKDGKRFASGSADKSVIIWTS--K 83
Query: 210 VHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAWSPS-KSVWEEQPNKTIPN 268
+ I YT H ++ C S + + S + + WSP KSV + + + I
Sbjct: 84 LEGILKYT--HND----SIQCVSYNPITHQLASCSSSDIGLWSPEQKSVSKHKSSSKI-- 135
Query: 269 LYTISALSWKRDGSRIACGGLCGSVEL 295
+ SW DG +A G G V +
Sbjct: 136 ----TCCSWTNDGQYLALGMFNGVVSI 158
Score = 56 (24.8 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 35 IWAWRGQNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGD 77
+ WR + V LAF PD T+L VA + N + +Y D
Sbjct: 4 VLTWRD---KVEQCVYDLAFKPDGTQLIVA-AGNRLLVYDTSD 42
Score = 55 (24.4 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 191 YILAAGSDRIVTIYESDG-RVHRIFDYTAPHYKEREFTVACS-SPSGQAVVVGSYD 244
YIL GSD+ V+++ DG R+ + + T+ + C P VVVG D
Sbjct: 294 YILLGGSDKQVSLFTKDGVRLGAVGEQTS-------WVWTCKVKPDSNYVVVGCQD 342
Score = 49 (22.3 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 233 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS 292
P G ++V + + + ++ S + QP K + T+ +++ +DG R A G S
Sbjct: 22 PDGTQLIVAAGNRLLVYDTSDGTLL---QPLKGHKD--TVYCVAYAKDGKRFASGSADKS 76
Query: 293 VELFESVLK 301
V ++ S L+
Sbjct: 77 VIIWTSKLE 85
Score = 45 (20.9 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 444 TISALSWKRDGSRIACGGLCGSVELFESVLK 474
T+ +++ +DG R A G SV ++ S L+
Sbjct: 55 TVYCVAYAKDGKRFASGSADKSVIIWTSKLE 85
Score = 40 (19.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 19/61 (31%), Positives = 24/61 (39%)
Query: 15 QDDVFNLDIVRLRSEGNVAGIWAWRGQNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYK 74
Q +F D VRL + G W W + VK PDS + V D I Y+
Sbjct: 303 QVSLFTKDGVRLGAVGEQTS-WVWTCK-------VK-----PDSNYVVVGCQDGTISFYQ 349
Query: 75 L 75
L
Sbjct: 350 L 350
Score = 39 (18.8 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 44 RKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKL 75
+++ V+ L S KLAV +++ +Y +
Sbjct: 512 KQATAVRCLDMSASRNKLAVVDENDMCLVYDI 543
>ZFIN|ZDB-GENE-041212-50 [details] [associations]
symbol:ift80 "intraflagellar transport 80 homolog
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0060026 "convergent
extension" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0060042 "retina morphogenesis in camera-type eye"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041212-50 GO:GO:0008104 GO:GO:0019861
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0060026
GO:GO:0060271 GO:GO:0060042 CTD:57560 HOGENOM:HOG000256816
HOVERGEN:HBG056828 OrthoDB:EOG4K3KX1 EMBL:BC086735 IPI:IPI00510981
RefSeq:NP_001008625.1 UniGene:Dr.37784 ProteinModelPortal:Q5PRA9
STRING:Q5PRA9 GeneID:494082 KEGG:dre:494082 NextBio:20865590
ArrayExpress:Q5PRA9 Uniprot:Q5PRA9
Length = 777
Score = 123 (48.4 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 63/275 (22%), Positives = 119/275 (43%)
Query: 607 DKKMRLTLLDIRT-SEKHNILNYCTFVQ---WLPGSDVVVAQSRHNACVWY--NIDTPDR 660
DK L L +R H+I + V W ++++ + VWY ++ D+
Sbjct: 483 DKNRDLYLTSVRKLGRAHSIYKIGSMVDTMAWNDSANILCGIQDNRFTVWYYPSVVFVDK 542
Query: 661 ITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYELDESLI-----EFGTAVHDSDFGKAI 715
P D + ++++ G+ +D SL+ + T +H+ + +
Sbjct: 543 -DLLPKTIFTKDSSEFSRPPQMVSYVGSQVTVRRVDGSLVCTAVSPYPTLLHE--YTSSA 599
Query: 716 LYLESLGINK-KEAEGMWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKIGEVW 774
+ ++L I + + + +W LA +A+ L AE+ YAA+G+I ++ IK ++
Sbjct: 600 RWEDALRICRFAKDQTLWSCLAGLAVANRELSTAEVAYAAIGEIDKVQYIN-FIK--DLP 656
Query: 775 SKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAE 834
SK++ C A + + + + AE L+ N I+ AI +++ LY W+ AL LA
Sbjct: 657 SKDS-------C---LAHILLFSGHVQEAEATLLQANLIYHAIQIHINLYSWDRALELAV 706
Query: 835 TNNYEYNELKKKYIKWLTDT-RQEDKAGELYEKEG 868
+ + K+L D +QE L EG
Sbjct: 707 KYKTHVDTVLAHRHKFLQDFGKQETNKRFLQYSEG 741
Score = 112 (44.5 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 185 LSWPA--GYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGS 242
+ W A IL+ G D +++S GR+ +F +APH + T +P G+ +GS
Sbjct: 194 VDWSAVNDLILSGGEDCKYKVWDSYGRL--LFS-SAPH--DYPITSVAWAPDGELFAMGS 248
Query: 243 YDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVE-LFESVLK 301
+ ++L K+ W K P+ ++ +L W DG+++A G CG+ LF +++
Sbjct: 249 FHTLRLC----DKTGWSYSLEK--PSTGSLLSLCWSADGTQLA--GACGNGHVLFAHIVE 300
Query: 302 -RTIWKGKFEM 311
R WK FE+
Sbjct: 301 QRWEWKN-FEI 310
Score = 63 (27.2 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 428 KSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVE-LFESVLK-RTIWKGKFEM 484
K+ W K P+ ++ +L W DG+++A G CG+ LF +++ R WK FE+
Sbjct: 257 KTGWSYSLEK--PSTGSLLSLCWSADGTQLA--GACGNGHVLFAHIVEQRWEWKN-FEI 310
Score = 60 (26.2 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 38/181 (20%), Positives = 72/181 (39%)
Query: 111 SDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVTEDASNFDQ 170
SDGK+ +++ A V+A N G +++ DG + + S
Sbjct: 85 SDGKLHLVSKSGRIEKSVEAHRGAVLAGRWNYDGTALITAGEDGQLKIW------SKSGM 138
Query: 171 QQGRVVQHPVPPYALSW-P-AGYIL-AAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFT 227
+ + Q P Y+++W P +G +L +G +V + + +V + A H +
Sbjct: 139 LRSTLAQQGTPVYSVAWAPDSGRVLYTSGRQLVVKPLQPNSKV---LQWKA-H--DGVIL 192
Query: 228 VACSSPSGQAVVVGSYDNIKLFAW-SPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIAC 286
S ++ G D K W S + ++ P+ Y I++++W DG A
Sbjct: 193 KVDWSAVNDLILSGGED-CKYKVWDSYGRLLFSSAPHD-----YPITSVAWAPDGELFAM 246
Query: 287 G 287
G
Sbjct: 247 G 247
Score = 39 (18.8 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 608 KKMRLTLLDIRTSEKHNILN 627
K +TL RT + N+LN
Sbjct: 306 KNFEITLTKRRTMQVRNVLN 325
>MGI|MGI:1932386 [details] [associations]
symbol:Ift122 "intraflagellar transport 122" species:10090
"Mus musculus" [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005929 "cilium" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IGI;IMP] [GO:0010172
"embryonic body morphogenesis" evidence=IMP] [GO:0030030 "cell
projection organization" evidence=IEA] [GO:0030991 "intraflagellar
transport particle A" evidence=ISO] [GO:0032391 "photoreceptor
connecting cilium" evidence=IDA] [GO:0035050 "embryonic heart tube
development" evidence=IMP] [GO:0042733 "embryonic digit
morphogenesis" evidence=IMP] [GO:0042995 "cell projection"
evidence=IEA] [GO:0048593 "camera-type eye morphogenesis"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0060271 "cilium morphogenesis" evidence=IGI;IMP] [GO:0060830
"ciliary receptor clustering involved in smoothened signaling
pathway" evidence=IGI] [GO:0060831 "smoothened signaling pathway
involved in dorsal/ventral neural tube patterning" evidence=IGI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011990
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1932386 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 Gene3D:1.25.40.10
GO:GO:0001843 GO:GO:0005932 GO:GO:0042733 GO:GO:0010172
GO:GO:0048593 GO:GO:0032391 GO:GO:0060271 GO:GO:0035050
GO:GO:0060831 CTD:55764 HOVERGEN:HBG069969 HOGENOM:HOG000261131
EMBL:AK131115 EMBL:AK031308 EMBL:AK044456 EMBL:AK167330
EMBL:AK167412 EMBL:BC066083 EMBL:BC067415 IPI:IPI00454034
IPI:IPI00858091 RefSeq:NP_001161235.1 RefSeq:NP_112454.2
UniGene:Mm.333335 ProteinModelPortal:Q6NWV3 SMR:Q6NWV3
IntAct:Q6NWV3 STRING:Q6NWV3 PhosphoSite:Q6NWV3 PaxDb:Q6NWV3
PRIDE:Q6NWV3 Ensembl:ENSMUST00000038234 Ensembl:ENSMUST00000112925
GeneID:81896 KEGG:mmu:81896 UCSC:uc009djg.2 UCSC:uc009dji.2
GeneTree:ENSGT00390000001016 OrthoDB:EOG4PG604 NextBio:350457
Bgee:Q6NWV3 Genevestigator:Q6NWV3 GO:GO:0060830 Uniprot:Q6NWV3
Length = 1182
Score = 151 (58.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 51/202 (25%), Positives = 97/202 (48%)
Query: 918 KAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTAL---EEEWGDHLIENKQY 974
+A ++Y+ + AL+ Y +++ D +PK L + +W ++ E K
Sbjct: 649 EAAKLYKRSGHENLALDMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNINEPK-- 706
Query: 975 NAAINHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQHVKTL--AQHFKTVKD 1032
AA+ YI AG++ KA++ S + W V +L I K D A+ L A +FK +
Sbjct: 707 -AAVEMYISAGEHAKAIEIS-GSHGW---VDMLIDIARKLDKAEREPLLMCACYFKKLDS 761
Query: 1033 YKTAEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKA-TFIQKCKQLEEENK 1091
A + Y + +V +Y T +W++A+A+ E+H E K ++ + L E ++
Sbjct: 762 PGYAAETYLKIGDLKSLVQLYVDTKRWDEAFALGEKH---PEFKDDVYVPYAQWLAENDR 818
Query: 1092 FKEAERLYLIIGEPDLAISMFK 1113
F+EA++ + G A+ + +
Sbjct: 819 FEEAQKAFHKAGRQGEAVRVLE 840
Score = 144 (55.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 82/364 (22%), Positives = 149/364 (40%)
Query: 1089 ENKFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESK 1148
+ KF EA +LY G +LA+ M+ + +E + + A
Sbjct: 644 QGKFHEAAKLYKRSGHENLALDMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNIN 703
Query: 1149 NYKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIALSNGGQEAV-EPVVYL--WAKSLGG 1205
K A + Y+ E AI++ S W D I ++ +A EP++ + K L
Sbjct: 704 EPKAAVEMYISAGEHAKAIEISGSHG-WVDML-IDIARKLDKAEREPLLMCACYFKKLDS 761
Query: 1206 DS-AVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFN 1264
A ++ L+S + DT ++D AF L + + K ++V+ YA L +N +F
Sbjct: 762 PGYAAETYLKIGDLKSLVQLYVDTKRWDEAFALGEKHPEFK-DDVYVPYAQWLAENDRFE 820
Query: 1265 EAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFENENFSKF 1324
EA+ F KA + EA+ + Q NA + + + + +L+ + + K
Sbjct: 821 EAQKAFHKAGRQGEAVRVL--EQLTHNAV-VESRFNDAAYYYWMLSMQCLDMAQDPAQK- 876
Query: 1325 ETLLLRAHKVDLIIEKYKMNHMWNDALRVCGEYVPSKLP--------LLQQEYEKEINTN 1376
+ +L + H + E Y H + R E LP L K
Sbjct: 877 DAMLDKFHHFQHLAELY---HGYQTIHRYTEEPFSFDLPETLFNISKFLLHSLTKATPLG 933
Query: 1377 ISKDIHSLITQARQWEQNGEFYNAVECYLKIKNVDVNLMVKILNEVTQLTLKYLNHDQSY 1436
ISK +++L T A+Q + G + A Y K++ + + ++ E+ LT++ S
Sbjct: 934 ISK-VNTLFTLAKQSKALGAYKLARHAYDKLRGLQIPARIQKSIELGTLTIRSKPFHDSE 992
Query: 1437 KILP 1440
+++P
Sbjct: 993 ELVP 996
Score = 77 (32.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 32/136 (23%), Positives = 60/136 (44%)
Query: 344 TDVAIMGNDRYLVARTPDTLLLGDL--HRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAG 401
T + + +R LV T D LL L H++ + V + G+ +F + ++
Sbjct: 25 TQLILAAGNRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGK--RFASGSADKSIIIWTS 82
Query: 402 ELS-IIEYGNNEILTCVSI-----KLFAWSPSK-SVWEEQPNKTIPNLYT--ISALSWKR 452
+L I++Y +N+ + CVS +L + S S +W + + + I+ SW
Sbjct: 83 KLEGILKYTHNDSIQCVSYNPVTHQLASCSSSDFGLWSPEQKSVSKHKSSSKITCCSWTN 142
Query: 453 DGSRIACGGLCGSVEL 468
DG +A G G + +
Sbjct: 143 DGQYLALGMANGIISI 158
Score = 61 (26.5 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 36/147 (24%), Positives = 61/147 (41%)
Query: 152 ADGSIVRYYVTEDASNFDQQQGRVVQHPVPPYALSWPA-GYILAAGS-DRIVTIYESDGR 209
A G+ + Y T D + +G H Y +++ G A+GS D+ + I+ S +
Sbjct: 30 AAGNRLLVYDTSDGTLLQPLKG----HKDTVYCVAYAKDGKRFASGSADKSIIIWTS--K 83
Query: 210 VHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAWSPS-KSVWEEQPNKTIPN 268
+ I YT H ++ C S + + S + WSP KSV + + + I
Sbjct: 84 LEGILKYT--HND----SIQCVSYNPVTHQLASCSSSDFGLWSPEQKSVSKHKSSSKI-- 135
Query: 269 LYTISALSWKRDGSRIACGGLCGSVEL 295
+ SW DG +A G G + +
Sbjct: 136 ----TCCSWTNDGQYLALGMANGIISI 158
Score = 58 (25.5 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 41/178 (23%), Positives = 68/178 (38%)
Query: 79 WGDKKVICNKFIQQCPVTTMVWLADGPII-YGQSDGKIKAAHVKAN---KTQTLYASNSF 134
W ++ +K +T W DG + G ++G I + K + S S
Sbjct: 119 WSPEQKSVSKHKSSSKITCCSWTNDGQYLALGMANGIISIRNKNGEEKVKIERPGGSLSP 178
Query: 135 VVALCLNVRGAGVLSGHADGSIVRYYVTEDASNFDQQQGRVVQHPVP----PYALSW-PA 189
+ ++C N H D I+ +F Q G+ + P P +S+
Sbjct: 179 IWSICWNPSR----EEHND--ILAVADWGQKLSFYQLSGKQIGKDRPLNFDPCCISYFTK 232
Query: 190 G-YILAAGSDRIVTIYESDG-RVHRIFDYTAPHYKEREFTVACS-SPSGQAVVVGSYD 244
G YIL GSD+ V+++ DG R+ + + + + C P VVVG D
Sbjct: 233 GEYILVGGSDKQVSLFTKDGVRLGTVGE-------QNSWVWTCRVKPDSNYVVVGCQD 283
Score = 53 (23.7 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 35 IWAWRGQNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGD 77
+ WR + + Y LAF PD T+L +A + N + +Y D
Sbjct: 4 VLTWRDKAEQCIY---DLAFKPDGTQLILA-AGNRLLVYDTSD 42
Score = 45 (20.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 15/69 (21%), Positives = 34/69 (49%)
Query: 233 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS 292
P G +++ + + + ++ S + QP K + T+ +++ +DG R A G S
Sbjct: 22 PDGTQLILAAGNRLLVYDTSDGTLL---QPLKGHKD--TVYCVAYAKDGKRFASGSADKS 76
Query: 293 VELFESVLK 301
+ ++ S L+
Sbjct: 77 IIIWTSKLE 85
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 444 TISALSWKRDGSRIACGGLCGSVELFESVLK 474
T+ +++ +DG R A G S+ ++ S L+
Sbjct: 55 TVYCVAYAKDGKRFASGSADKSIIIWTSKLE 85
Score = 42 (19.8 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 21/71 (29%), Positives = 28/71 (39%)
Query: 5 KYTDVSSNVLQDDVFNLDIVRLRSEGNVAGIWAWRGQNGRKSYVVKGLAFSPDSTKLAVA 64
+Y V + Q +F D VRL + G W W + VK PDS + V
Sbjct: 234 EYILVGGSDKQVSLFTKDGVRLGTVGE-QNSWVWTCR-------VK-----PDSNYVVVG 280
Query: 65 QSDNIIFIYKL 75
D I Y+L
Sbjct: 281 CQDGTISFYQL 291
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 44 RKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKL 75
+++ V+ L S KLAV ++ +Y +
Sbjct: 453 KQATAVRCLDMSASRNKLAVVDENDTCLVYDI 484
>FB|FBgn0265102 [details] [associations]
symbol:Oseg1 "Outer segment 1" species:7227 "Drosophila
melanogaster" [GO:0050954 "sensory perception of mechanical
stimulus" evidence=IMP] [GO:0035058 "nonmotile primary cilium
assembly" evidence=IMP] [GO:0031513 "nonmotile primary cilium"
evidence=IDA] [GO:0042384 "cilium assembly" evidence=ISM;IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0035058
EMBL:AY069816 ProteinModelPortal:Q8T9D3 SMR:Q8T9D3 PRIDE:Q8T9D3
FlyBase:FBgn0265102 InParanoid:Q8T9D3 OrthoDB:EOG4WWQ09
ArrayExpress:Q8T9D3 Bgee:Q8T9D3 Uniprot:Q8T9D3
Length = 1169
Score = 159 (61.0 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 78/393 (19%), Positives = 168/393 (42%)
Query: 732 WQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELWA 791
W+ LA+ A++ ++++A Y + ++ +L+ IGE+ ++ P + L A
Sbjct: 599 WEGLAQSALEALHINIARDAYVKVRNLP---WLK---LIGELRDQQQRSAVPKEV--LLA 650
Query: 792 RMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALS-LAETNNYEYNELKKKYIKW 850
+FK A ++L+ + +A++MY L ++ A + + + E EL +K +W
Sbjct: 651 ENCAFAGKFKEAARLFLKCGQSSRALEMYTDLRMFDLAQEYIKDGTDQEKKELVRKRAEW 710
Query: 851 LTDTRQEDKAGELYEKEGDHQTALNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVKGL 910
++ A EL G++Q A++ + + ++ + L D + + + L
Sbjct: 711 AYSVKEPRAAAELLLSAGENQKAIDIVAEQGWADVLYDIGRR--LSLTERDSLESVAQNL 768
Query: 911 IKNESYIKAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIE 970
++ A +I++ + + ++ + + + + + L + P+ + + + G L E
Sbjct: 769 KTLKALPLAAEIFKKLGDEAQVVQLHIEVRDWPEAFRLAESL-PELLPTVHYQHGQWLAE 827
Query: 971 NKQYNAAINHYIEAGKN---NKAL----DTSIKAKQ--------WKKAVQILQVITNKQD 1015
Q+ A YI+AG+ N+ L +T+I ++ W A Q L V K++
Sbjct: 828 TDQFIEAHQAYIKAGRTKEANRLLKQLSNTAIVEERYLDASYFYWLLAKQHLDVYHAKEE 887
Query: 1016 ---IAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNV 1072
+ H+ H + K Y IYS+ M E + + + I +
Sbjct: 888 QNPVDHHLTEYKNHLRVAKVYYAYSVIYSY--MKEPFTT-HSPVSLFNVSRFILNEVEQK 944
Query: 1073 GEIKA-TFIQKCKQLEEENKFKEAERLYLIIGE 1104
G K + L ++ KF +A +L L+I +
Sbjct: 945 GVPKGVSMFSVLFTLAKQAKFLQANKLCLLINK 977
Score = 147 (56.8 bits), Expect = 5.7e-07, Sum P(3) = 5.7e-07
Identities = 65/262 (24%), Positives = 118/262 (45%)
Query: 867 EGDHQTALNYYLKANFTSKACNLVQNEPYL-----LENHDVVSQIVKGLIKNESYIKAGQ 921
EG Q+AL L N A V+N P+L L + S + K ++ E+ AG+
Sbjct: 600 EGLAQSALEA-LHINIARDAYVKVRNLPWLKLIGELRDQQQRSAVPKEVLLAENCAFAGK 658
Query: 922 IYEFTN------ENEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYN 975
E ++ +ALE Y +++D + + + L + + K+
Sbjct: 659 FKEAARLFLKCGQSSRALEMYTDLRMFDLAQEYIKDGTDQEKKELVRKRAEWAYSVKEPR 718
Query: 976 AAINHYIEAGKNNKALDTSIKAKQ-WKKAVQILQVITNKQDIAQH--VKTLAQHFKTVKD 1032
AA + AG+N KA+D I A+Q W +L I + + + ++++AQ+ KT+K
Sbjct: 719 AAAELLLSAGENQKAID--IVAEQGW---ADVLYDIGRRLSLTERDSLESVAQNLKTLKA 773
Query: 1033 YKTAEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATF-IQKCKQLEEENK 1091
A +I+ Q+V ++ + W +A+ +AE ++ E+ T Q + L E ++
Sbjct: 774 LPLAAEIFKKLGDEAQVVQLHIEVRDWPEAFRLAE---SLPELLPTVHYQHGQWLAETDQ 830
Query: 1092 FKEAERLYLIIGEPDLAISMFK 1113
F EA + Y+ G A + K
Sbjct: 831 FIEAHQAYIKAGRTKEANRLLK 852
Score = 127 (49.8 bits), Expect = 6.3e-05, Sum P(3) = 6.3e-05
Identities = 50/193 (25%), Positives = 83/193 (43%)
Query: 1091 KFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESKNY 1150
KFKEA RL+L G+ A+ M+ + R ++ + +++ A+ K
Sbjct: 658 KFKEAARLFLKCGQSSRALEMYTDLRMFDLAQEYIKDGTDQEKKELVRKRAEWAYSVKEP 717
Query: 1151 KQAEKYYLDCNEWKLAIKMYRSLNLWEDA-YRIA--LSNGGQEAVEPVVYLWAKSLGG-D 1206
+ A + L E + AI + W D Y I LS ++++E V K+L
Sbjct: 718 RAAAELLLSAGENQKAIDIVAEQG-WADVLYDIGRRLSLTERDSLESVAQN-LKTLKALP 775
Query: 1207 SAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFNEA 1266
A + +L + + + AF LA+ + L VHY++ L + QF EA
Sbjct: 776 LAAEIFKKLGDEAQVVQLHIEVRDWPEAFRLAE-SLPELLPTVHYQHGQWLAETDQFIEA 834
Query: 1267 ETQFIKANKPKEA 1279
+IKA + KEA
Sbjct: 835 HQAYIKAGRTKEA 847
Score = 70 (29.7 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 20/71 (28%), Positives = 35/71 (49%)
Query: 219 PHYKEREFTV--ACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALS 276
P+ K+ E +V C +P G +VV + D +L + P+ N + T++ ++
Sbjct: 14 PNSKDNEISVHNVCYAPDGSQLVVAAGD--RLLIYDPNDG---SLLNTLKAHKDTVNCVA 68
Query: 277 WKRDGSRIACG 287
+ RDG R A G
Sbjct: 69 YSRDGKRFASG 79
Score = 61 (26.5 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 30/141 (21%), Positives = 59/141 (41%)
Query: 339 YGYEITDVAIMGNDRYLVARTPDTLLLGDL--HRNLLSEVLWPDSGRNEKFYFDNVTVCL 396
Y + + + + DR L+ D LL L H++ ++ V + G+ + V +
Sbjct: 28 YAPDGSQLVVAAGDRLLIYDPNDGSLLNTLKAHKDTVNCVAYSRDGKRFASGASDKMV-I 86
Query: 397 VFNAGELSIIEYGNNEILTCVSIK-----LFAWSPSKSVWEEQPNKTIPNLYTISA---- 447
V++ +++Y + + + C+S L + S S + K + Y ISA
Sbjct: 87 VWSPQLEGLLKYSHGDSIQCMSFNPVSHHLASCSLSDFAFWSADQKAVQK-YKISARVNG 145
Query: 448 LSWKRDGSRIACGGLCGSVEL 468
SW DG + G G++ +
Sbjct: 146 CSWTNDGQYLILGLANGTISI 166
Score = 48 (22.0 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 49 VKGLAFSPDSTKLAVAQSDNIIFIYKLGD 77
V + ++PD ++L VA D ++ IY D
Sbjct: 23 VHNVCYAPDGSQLVVAAGDRLL-IYDPND 50
Score = 45 (20.9 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 39/191 (20%), Positives = 77/191 (40%)
Query: 574 IDLITNLPTLHINHDSKIDWLELNETAHKLLYRDKKMRLTLLDIRTSEKHNILNYCTFVQ 633
I L +LP L S + L++N K+ D RL + D+ IL T V
Sbjct: 451 IFLNNSLPLLITTAVSAVRCLDINSKRSKIAVVDDVGRLVVRDVIND---TILYQDTGVN 507
Query: 634 ---WLPGSDVVVAQSRHNACVWYNI-DTPDRITQFPVRGDIIDVIRENGQSEILTQDGN- 688
W D ++ + + + + P R Q + G ++ + G + + GN
Sbjct: 508 SVTWNTHLDSMLCYTHTTGGLSVRVGNLPPRAPQ-NMHGVVVGLC---GATAFCLR-GNI 562
Query: 689 -HQLGYELDESLIEFGTAVHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHV 747
H L ++ +F + F +A + LG+ + W+ LA+ A++ ++++
Sbjct: 563 MHNTPLALGSTMWQF---IEAGLFDEAY-QVACLGVTTSD----WEGLAQSALEALHINI 614
Query: 748 AEICYAALGDI 758
A Y + ++
Sbjct: 615 ARDAYVKVRNL 625
Score = 38 (18.4 bits), Expect = 0.00029, Sum P(4) = 0.00029
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 49 VKGLAFSPDSTKLAVAQSDNIIFIY 73
V +A+S D + A SD ++ ++
Sbjct: 64 VNCVAYSRDGKRFASGASDKMVIVW 88
Score = 37 (18.1 bits), Expect = 3.3e-05, Sum P(4) = 3.3e-05
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 272 ISALSWKRDGSRIACGGLCGSVEL 295
++ SW DG + G G++ +
Sbjct: 143 VNGCSWTNDGQYLILGLANGTISI 166
>MGI|MGI:1921932 [details] [associations]
symbol:Wdr35 "WD repeat domain 35" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0030991 "intraflagellar transport particle A" evidence=ISO]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=ISO;IMP] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921932 GO:GO:0005737 GO:GO:0005813
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005932 GO:GO:0042384
GO:GO:0035085 GeneTree:ENSGT00610000085970 CTD:57539
eggNOG:NOG263340 HOGENOM:HOG000255527 HOVERGEN:HBG079343
OMA:DENHPQE InterPro:IPR017233 PIRSF:PIRSF037536 EMBL:AK029896
EMBL:AK083971 EMBL:AC110376 EMBL:BC056925 IPI:IPI00318154
IPI:IPI01007988 RefSeq:NP_001152999.1 RefSeq:NP_766058.3
UniGene:Mm.87389 ProteinModelPortal:Q8BND3 SMR:Q8BND3
PhosphoSite:Q8BND3 PaxDb:Q8BND3 PRIDE:Q8BND3
Ensembl:ENSMUST00000085745 Ensembl:ENSMUST00000111113 GeneID:74682
KEGG:mmu:74682 UCSC:uc007naj.2 UCSC:uc007nak.2 InParanoid:Q8BND3
NextBio:341374 Bgee:Q8BND3 CleanEx:MM_WDR35 Genevestigator:Q8BND3
GermOnline:ENSMUSG00000066643 Uniprot:Q8BND3
Length = 1181
Score = 118 (46.6 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 58/262 (22%), Positives = 120/262 (45%)
Query: 731 MWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELW 790
+W+ LAE A+Q +L+ A+ + D F++ +G + S+ ++ E+
Sbjct: 698 LWRLLAEAALQKLDLYTAQQAFVRCKDYQGIKFVK---LLGNLQSES------MKQAEVI 748
Query: 791 ARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAETNNYEYN----ELKKK 846
A +F+ AE +Y + + AI + +KL W L L +T + + + E
Sbjct: 749 AYFG----RFEDAERMYQDMDRRDLAIGLRMKLGDWFRVLQLLKTGSGDADDSLLEQANN 804
Query: 847 YI-KWLTDTRQEDKAGELYEKEGDHQTALN--YYLKANFTSKACNLVQNEPYLLENHDVV 903
I ++ D ++ A + Y K G +Q L YY+ ++ + + N L ENH ++
Sbjct: 805 AIGEYFADRQKWQNAVQYYVK-GRNQERLAECYYMLEDY--EGLETLANS--LPENHKLL 859
Query: 904 SQIVKGLIKNESYIKAGQIYEFTNENEKALE-CYRKGKVYDKCIDLTRKINPKNVTALEE 962
+I + ++ +A + N+ + A++ C + ++K ++L + + K + +L
Sbjct: 860 PEIAQMFVRVGMCEQAVSAFLKCNQPKAAVDTCVHLNQ-WNKAVELAKSHSMKEIGSLLA 918
Query: 963 EWGDHLIENKQYNAAINHYIEA 984
+ HL+E + AI Y +A
Sbjct: 919 RYASHLLEKNKTLDAIELYRKA 940
Score = 102 (41.0 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 34/124 (27%), Positives = 51/124 (41%)
Query: 1261 GQFNEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFE-NE 1319
G +A + F+K N+PK A+ +H W A +A H IG +L + E N+
Sbjct: 870 GMCEQAVSAFLKCNQPKAAVDTCVHLNQWNKAVELAKSHSMKEIGSLLARYASHLLEKNK 929
Query: 1320 NFSKFETLLLRAHKVDLIIEKYKMNH----MWNDALRVCGEYVPSKLPLLQQEYEKEINT 1375
E ++ D YK+ LRV YV S L L++Q +E+ N
Sbjct: 930 TLDAIELYRKASYFFDAAKLMYKIADEEAKKRTKPLRVKKLYVLSAL-LIEQYHEQMKNA 988
Query: 1376 NISK 1379
K
Sbjct: 989 QRGK 992
Score = 99 (39.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 54/193 (27%), Positives = 88/193 (45%)
Query: 34 GIWAWRGQNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDD--WGDKKVICNKFIQ 91
G W N R VV+ ++++ D K+ + D + + + + WG K + K IQ
Sbjct: 103 GSWYEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIWG-KDL---KGIQ 158
Query: 92 QCPVTTMVWLADGPII-YGQSDGKIKAAHVKANKTQTLYASNSFVVAL---CL-NVRGAG 146
C VT W AD I+ +G ++G+I H+ N+ +F++ + CL NV GA
Sbjct: 159 LCHVT---WSADSKILLFGMANGEI---HIYDNQ-------GNFIMKMKLNCLVNVTGAI 205
Query: 147 VLSGHADGSIVRYYVTED----ASNFDQQQGRVVQH-----PV----PPYA--LSWP-AG 190
++G YV D A FD + ++++H PV Y + W G
Sbjct: 206 SIAGIHWYHGTEGYVEPDCPCLAICFDNGRCQIMRHENDQNPVLIDTGMYVVGIQWNHIG 265
Query: 191 YILA-AGSDRIVT 202
+LA AGS ++VT
Sbjct: 266 SVLAVAGSQKVVT 278
Score = 98 (39.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 68/340 (20%), Positives = 137/340 (40%)
Query: 799 QFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAETNNYEYNELKKKYIKWLTDTRQED 858
+F+ AE +Y + + AI + +KL W L L +T + + ++ L + + +
Sbjct: 753 RFEDAERMYQDMDRRDLAIGLRMKLGDWFRVLQLLKTGSGDADDS-------LLE-QANN 804
Query: 859 KAGELYEKEGDHQTALNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVKGLIKNESYI- 917
GE + Q A+ YY+K + Y+LE+++ + + L +N +
Sbjct: 805 AIGEYFADRQKWQNAVQYYVKGRNQERLAECY----YMLEDYEGLETLANSLPENHKLLP 860
Query: 918 KAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAA 977
+ Q++ E+A+ + K +D +N N A+E + E A
Sbjct: 861 EIAQMFVRVGMCEQAVSAFLKCNQPKAAVDTCVHLNQWN-KAVELAKSHSMKEIGSLLAR 919
Query: 978 I-NHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTA 1036
+H +E K A++ KA + A +++ I +++ K + + K Y +
Sbjct: 920 YASHLLEKNKTLDAIELYRKASYFFDAAKLMYKIADEE-----AKKRTKPLRVKKLYVLS 974
Query: 1037 EKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAE 1096
+ HEQ+ + Q G+ + + A L G ++ + + + N ++ AE
Sbjct: 975 ALLIEQ--YHEQMKNA--QRGKVKGKNSEATSAL-AGLLEEEVLSTTSRFTD-NAWRGAE 1028
Query: 1097 RLYLII--------GEPDLAISMFKNQRQYENMIKLVRNY 1128
+ I G D A+ + R YE++I V Y
Sbjct: 1029 AYHFFILAQRQLYEGYVDTALKTALHLRDYEDIIPSVEIY 1068
Score = 93 (37.8 bits), Expect = 0.00096, Sum P(4) = 0.00096
Identities = 28/120 (23%), Positives = 56/120 (46%)
Query: 1396 EFYNAVECYLKIKNVD-VNLMVKILNEVTQLTLKYLNHDQSYKILPSLVPKLMEFKQYDL 1454
++ NAV+ Y+K +N + + +L + L + +++K+LP + + +
Sbjct: 815 KWQNAVQYYVKGRNQERLAECYYMLEDYEGLETLANSLPENHKLLPEIAQMFVRVGMCEQ 874
Query: 1455 AVRVYLNIDMVKEAVDIFIYTQNWNKARKLCAELKPEYLSYVENQY-KEWLKKNGDADML 1513
AV +L + K AVD ++ WNKA +L + + + +Y L+KN D +
Sbjct: 875 AVSAFLKCNQPKAAVDTCVHLNQWNKAVELAKSHSMKEIGSLLARYASHLLEKNKTLDAI 934
Score = 47 (21.6 bits), Expect = 0.00096, Sum P(4) = 0.00096
Identities = 21/92 (22%), Positives = 41/92 (44%)
Query: 1198 LWAKSLGGDSAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVL 1257
LW L ++A++ L+ + ++ + C YQ + K+ L+ K A V+
Sbjct: 698 LWR--LLAEAALQKLDLYTAQQAFVR--CKDYQ---GIKFVKL--LGNLQSESMKQAEVI 748
Query: 1258 EDNGQFNEAETQFIKANKPKEAISMYIHNQDW 1289
G+F +AE + ++ AI + + DW
Sbjct: 749 AYFGRFEDAERMYQDMDRRDLAIGLRMKLGDW 780
Score = 37 (18.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 1149 NYKQAEKYYLDCNEWKLAI 1167
N +KY LDC +L++
Sbjct: 533 NVALIQKYSLDCRACQLSL 551
>RGD|2318759 [details] [associations]
symbol:Ift140 "intraflagellar transport 140" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=ISO] [GO:0030991
"intraflagellar transport particle A" evidence=ISO] [GO:0032391
"photoreceptor connecting cilium" evidence=ISO] [GO:0035085 "cilium
axoneme" evidence=ISO] [GO:0036064 "cilium basal body"
evidence=ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 RGD:2318759 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0042384 GO:GO:0032391 GO:GO:0035085
GeneTree:ENSGT00390000007515 IPI:IPI00368713
Ensembl:ENSRNOT00000022063 Uniprot:F1LY69
Length = 1433
Score = 139 (54.0 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 91/469 (19%), Positives = 185/469 (39%)
Query: 1036 AEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEA 1095
AE++Y C ++ + Y + QW+KA +AE H V ++ T+ K LE A
Sbjct: 833 AEQLYKKCKRYDLLNKFYQASDQWQKAVEVAELHDRV-HLRTTYYNYAKHLEASADCGLA 891
Query: 1096 ERLYLIIGEPDLAISMFKNQ--RQYENMIKLVRNYXXXXXXXXXXXXAQECEES-KNYKQ 1152
Y + ++ + E I +++ E + + + Y+
Sbjct: 892 LSYYEKSDTHRFEVPRMLSEDLQSLELYINRMKDKTLWRWWAQYLESQAEMDTALRYYEL 951
Query: 1153 AEKYY----LDCNEWKL--AIKMYRSLNLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGD 1206
A+ Y+ + C + + A ++ W +Y +A Q+ V+ V+ + ++ +
Sbjct: 952 AQDYFSLVRIHCFQGNIQKAAEIANETGDWAASYHLARQYESQDEVKQAVHFYTRAQAFN 1011
Query: 1207 SAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNG-QFNE 1265
+A+RL C N D +L + + S E++ + A E+ G Q +
Sbjct: 1012 NAIRL---------CKENGLDD-------QLMNLALLSSPEDM-IEAARYYEEKGEQMDR 1054
Query: 1266 AETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFENENFSKFE 1325
A + KA +A+ + Q + + IA + D S +L S E+ F K
Sbjct: 1055 AVMLYHKAGHFSKALELAFTTQQFAALQLIAEDLDEKSDPALLARCSDFCIEHRQFEKAV 1114
Query: 1326 TLLLRAHK----VDLIIEK-YKMNHMWNDALRVCGEYVPSKLPLLQQEYEKEINTNISKD 1380
LLL A K + L +E+ + + + V + ++ E+ N + +
Sbjct: 1115 ELLLAAKKYHEALQLCLEQNMTITEEMAEKMTVSKDSKDLSEESRRELLEQIANCCMRQG 1174
Query: 1381 IHSLITQARQWEQNGEFYNAVECYLKIKNVDVNLMVKILNEVTQLTLKYLNHDQS--YKI 1438
+ L T +++ Q G A+ LK + + + ++ ++ + N+ QS ++
Sbjct: 1175 NYHLAT--KKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLDWRK 1232
Query: 1439 LPSLVPKLMEFKQYDLAVRVYLNIDMVKEAVDIFIYTQNWNKARKLCAE 1487
P ++ ++ F A+ + V+I Y QN++KA E
Sbjct: 1233 EPEIMKNIISFYTKGRALDLLAGFYDACAQVEIDEY-QNYDKAHGALTE 1280
Score = 117 (46.2 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 84/447 (18%), Positives = 170/447 (38%)
Query: 999 QWKKAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHE-QIVDMYHQTG 1057
QW+KAV++ + + ++ + A+H + D A Y D H ++ M +
Sbjct: 855 QWQKAVEVAE-LHDRVHLRTTYYNYAKHLEASADCGLALSYYEKSDTHRFEVPRMLSEDL 913
Query: 1058 QWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISMFKNQRQ 1117
Q + Y + + A +++ +++ ++ E + Y + + I F+
Sbjct: 914 QSLELYINRMKDKTLWRWWAQYLESQAEMDTALRYYELAQDYFSL----VRIHCFQG--- 966
Query: 1118 YENMIKLVRNYXXXXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMYRSLNLWE 1177
N+ K A++ E KQA +Y + AI++ + L +
Sbjct: 967 --NIQKAAEIANETGDWAASYHLARQYESQDEVKQAVHFYTRAQAFNNAIRLCKENGLDD 1024
Query: 1178 DAYRIALSNGGQEAVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQFDFAFEL 1237
+AL + ++ +E Y K D AV L ++ + A T QF A +L
Sbjct: 1025 QLMNLALLSSPEDMIEAARYYEEKGEQMDRAVMLYHKAGHFSKALELAFTTQQFA-ALQL 1083
Query: 1238 AKIGMKSKLEEVHY-KYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAERIA 1296
+ K + + + ++ QF +A + A K EA+ + + Q+ E +A
Sbjct: 1084 IAEDLDEKSDPALLARCSDFCIEHRQFEKAVELLLAAKKYHEALQLCLE-QNMTITEEMA 1142
Query: 1297 NEHDPTSIGDILLNQSKCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDALRVCGE 1356
+ + L +S+ E + +R L +KY A+R +
Sbjct: 1143 EKMTVSKDSKDLSEESRREL----LEQIANCCMRQGNYHLATKKYTQAGNKLKAMRALLK 1198
Query: 1357 YVPS-KLPLLQQ-EYEKEINTNISKDIHSLITQARQWEQNGEFY-NAVECYLKIKNVDVN 1413
+ K+ +KEI + + SL W + E N + Y K + +D
Sbjct: 1199 SGDTEKIVFFAGVSRQKEIYIMAANYLQSL-----DWRKEPEIMKNIISFYTKGRALD-- 1251
Query: 1414 LMVKILNEVTQLTL-KYLNHDQSYKIL 1439
L+ + Q+ + +Y N+D+++ L
Sbjct: 1252 LLAGFYDACAQVEIDEYQNYDKAHGAL 1278
Score = 93 (37.8 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 43/179 (24%), Positives = 75/179 (41%)
Query: 697 ESLIEFGTAVHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEICYAALG 756
++++ F V D +A +S+ + K E +W+N+A + ++ L VA++C +G
Sbjct: 745 DAMLNFSFFVTIGDMDEAF---KSIKLIKSET--VWENMARMCVKTQRLDVAKVCLGNMG 799
Query: 757 DISTTHFLRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKV---AEGIYLENNEI 813
LRE +E PEL AR+A+L Q + AE +Y +
Sbjct: 800 HARGARALREA-------ERE---------PELEARVAMLAIQLGMLEEAEQLYKKCKRY 843
Query: 814 HKAIDMYLKLYKWEDALSLAETNNYEY-NELKKKYIKWLTDTRQEDKAGELYEKEGDHQ 871
Y +W+ A+ +AE ++ + Y K L + A YEK H+
Sbjct: 844 DLLNKFYQASDQWQKAVEVAELHDRVHLRTTYYNYAKHLEASADCGLALSYYEKSDTHR 902
Score = 55 (24.4 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 223 EREF--TVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRD 280
ER F T C P+ + +G ++ ++ ++ +EQ +P+ I+ LSW
Sbjct: 29 ERSFQATSLCWHPTRLILAIG-WETGEVIMFNKQD---KEQHTVPLPHTTDIAILSWSTS 84
Query: 281 GSRIACGGLCGSVELF 296
GS + G G + L+
Sbjct: 85 GSCLVSGDKLGVLLLW 100
Score = 51 (23.0 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 432 EEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELF 469
+EQ +P+ I+ LSW GS + G G + L+
Sbjct: 63 KEQHTVPLPHTTDIAILSWSTSGSCLVSGDKLGVLLLW 100
>ZFIN|ZDB-GENE-060810-148 [details] [associations]
symbol:wdr35 "WD repeat domain 35" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-060810-148
Gene3D:2.130.10.10 SUPFAM:SSF50978 GeneTree:ENSGT00610000085970
CTD:57539 eggNOG:NOG263340 HOGENOM:HOG000255527 HOVERGEN:HBG079343
OMA:DENHPQE OrthoDB:EOG43FGW3 InterPro:IPR017233 PIRSF:PIRSF037536
EMBL:AL935163 IPI:IPI00832855 RefSeq:NP_001139061.1
UniGene:Dr.87936 Ensembl:ENSDART00000100663 GeneID:565515
KEGG:dre:565515 NextBio:20885926 Uniprot:B7ZD88
Length = 1203
Score = 129 (50.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 84/395 (21%), Positives = 164/395 (41%)
Query: 731 MWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELW 790
+W+ LAE A+Q +L +AE + D F++ + K+
Sbjct: 720 LWRLLAEAALQKLDLKMAEQAFVRCRDYQGIEFVKRLSNLQSEAMKQ------------- 766
Query: 791 ARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAETNNYEYNE--LKKKYI 848
A +A +F+ AE +YL+ + AI + +KL W L L +T + + ++ L++ Y
Sbjct: 767 AEVAAYFSRFEEAERMYLDMDRRDLAISLRIKLGDWFRVLQLLKTGSGDSDDALLEQAYN 826
Query: 849 K---WLTDTRQEDKAGELYEKEGDHQTALN--YYLKANFTSKACNLVQNEPYLLENHDVV 903
+ D RQ+ Y +G +Q L YY+ ++ L + P ENH ++
Sbjct: 827 AIGDYFAD-RQKWLNAVQYYLQGRNQERLAECYYMLEDYDGLE-RLANSLP---ENHKLL 881
Query: 904 SQIVKGLIKNESYIKAGQIYEFTNENEKALE-CYRKGKVYDKCIDLTRKINPKNVTALEE 962
I + + +A + N+ + A++ C + ++K ++L + + K + L
Sbjct: 882 PDIGQMFVTVGMCEQAVSAFLKCNQPKAAVDACVHLNQ-WNKAVELAKNHSMKEIGPLLS 940
Query: 963 EWGDHLIE-NKQYNAA-----INHYIEAGK-NNKALDTSIKAKQWKKAVQILQVITNK-- 1013
++ HL+E NK A +H+++A K K + K + V+ L V+
Sbjct: 941 KYASHLLEKNKTLEAVELYRKAHHFLDAAKLMYKIAEEEAKKRTRPLRVKKLYVLAALLV 1000
Query: 1014 QDIAQHVKTLAQHFKTV-KDYKTAEKIYSHCDMHEQIVDMYHQTGQWEKAYA-----IAE 1067
+D +K+ +Q KT K + + + E D W A A +A+
Sbjct: 1001 EDFHTQIKS-SQQSKTKGKKSEATSALAGLLEEDESSSDSRILDDAWRGAEAYHFFLLAQ 1059
Query: 1068 QHLNVGEIKATFIQKCKQLEEENKFKEAERLYLII 1102
+ L G++ A ++ L + A +Y ++
Sbjct: 1060 RQLYDGKVDAA-MRTALHLRDYEDIIPAVEIYSLL 1093
Score = 120 (47.3 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 71/348 (20%), Positives = 143/348 (41%)
Query: 791 ARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAETNNYEYNE--LKKKYI 848
A +A +F+ AE +YL+ + AI + +KL W L L +T + + ++ L++ Y
Sbjct: 767 AEVAAYFSRFEEAERMYLDMDRRDLAISLRIKLGDWFRVLQLLKTGSGDSDDALLEQAY- 825
Query: 849 KWLTDTRQEDKAGELYEKEGDHQTALNYYLKANFTSKACNLVQNEPYLLENHDVVSQIVK 908
+ G+ + A+ YYL+ + Y+LE++D + ++
Sbjct: 826 ---------NAIGDYFADRQKWLNAVQYYLQGRNQERLAECY----YMLEDYDGLERLAN 872
Query: 909 GLIKNESYIK-AGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDH 967
L +N + GQ++ E+A+ + K +D +N N A+E
Sbjct: 873 SLPENHKLLPDIGQMFVTVGMCEQAVSAFLKCNQPKAAVDACVHLNQWN-KAVELAKNHS 931
Query: 968 LIE-NKQYNAAINHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQHVKTLAQH 1026
+ E + +H +E K +A++ KA + A +++ I ++ K +
Sbjct: 932 MKEIGPLLSKYASHLLEKNKTLEAVELYRKAHHFLDAAKLMYKIAEEE-----AKKRTRP 986
Query: 1027 FKTVKDYKTAEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQL 1086
+ K Y A + D H QI + +K+ A + + E +++ + L
Sbjct: 987 LRVKKLYVLAALLVE--DFHTQIKSSQQSKTKGKKSEATSALAGLLEEDESS--SDSRIL 1042
Query: 1087 EEENKFKEAERLYLII------GEPDLAISMFKNQRQYENMIKLVRNY 1128
++ + EA +L+ G+ D A+ + R YE++I V Y
Sbjct: 1043 DDAWRGAEAYHFFLLAQRQLYDGKVDAAMRTALHLRDYEDIIPAVEIY 1090
Score = 114 (45.2 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 70/338 (20%), Positives = 130/338 (38%)
Query: 1075 IKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISM----FKNQRQYENMIKLVRNYXX 1130
I+ I+ Q E+N RL L + M F R Y+ I+ V+
Sbjct: 700 IEKVGIEDASQFIEDNPHPRLWRLLAEAALQKLDLKMAEQAFVRCRDYQG-IEFVKRLSN 758
Query: 1131 XXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIALSNGGQE 1190
A+ +++AE+ YLD + LAI + L W ++ L G +
Sbjct: 759 LQSEAMKQ--AEVAAYFSRFEEAERMYLDMDRRDLAISLRIKLGDWFRVLQL-LKTGSGD 815
Query: 1191 AVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQFDFAFELAKI-GMKSKLEEV 1249
+ + ++ ++G A R L+ ++ + + + L G++ +
Sbjct: 816 SDDALLEQAYNAIGDYFADRQ-KWLNAVQYYLQGRNQERLAECYYMLEDYDGLERLANSL 874
Query: 1250 HYKYALVLEDNGQF-------NEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPT 1302
+ L L D GQ +A + F+K N+PK A+ +H W A +A H
Sbjct: 875 PENHKL-LPDIGQMFVTVGMCEQAVSAFLKCNQPKAAVDACVHLNQWNKAVELAKNHSMK 933
Query: 1303 SIGDILLNQSKCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDALR----VCGEYV 1358
IG +L SK+ + LL +K +E Y+ H + DA + + E
Sbjct: 934 EIGPLL-------------SKYASHLLEKNKTLEAVELYRKAHHFLDAAKLMYKIAEEEA 980
Query: 1359 PSKLPLLQQEYEKEINTNISKDIHSLITQARQWEQNGE 1396
+ L+ + + + +D H+ I ++Q + G+
Sbjct: 981 KKRTRPLRVKKLYVLAALLVEDFHTQIKSSQQSKTKGK 1018
Score = 78 (32.5 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 27/118 (22%), Positives = 54/118 (45%)
Query: 34 GIWAWRGQNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQC 93
G W N R VV+ ++++ D K+ + D + + G G++ I K ++
Sbjct: 103 GSWYEEMINNRNKSVVRSMSWNADGLKICIVYEDGAVIV---GSVDGNR--IWGKELKGT 157
Query: 94 PVTTMVWLADGPII-YGQSDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSG 150
+ + W D I+ +G ++G+I H+ N+ + + +A NV GA ++G
Sbjct: 158 QLAHVAWSPDSKILLFGMANGEI---HIYDNQGNFIMKMSMSCLA---NVTGALSIAG 209
Score = 74 (31.1 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 37/170 (21%), Positives = 70/170 (41%)
Query: 266 IPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLV-KPL 324
IPN + +SW +D IACGG G +++ + L+ K + + +PS + + + L
Sbjct: 11 IPNNTVLKCVSWNKDQGFIACGGEDGLLKVLK--LETYTDDAKLKGL-AAPSNLSMNQTL 67
Query: 325 SGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGRN 384
G S V+ ++ ++T N +V ++ N V+ R+
Sbjct: 68 EGHSGAVQVVTWNEQYQKLTTSD--QNGLIIVWMLYKGSWYEEMINNRNKSVV-----RS 120
Query: 385 EKFYFDNVTVCLVFNAGELSIIEYGNNEI----LTCVSIKLFAWSPSKSV 430
+ D + +C+V+ G + + N I L + AWSP +
Sbjct: 121 MSWNADGLKICIVYEDGAVIVGSVDGNRIWGKELKGTQLAHVAWSPDSKI 170
Score = 64 (27.6 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 439 IPNLYTISALSWKRDGSRIACGGLCGSVELFE 470
IPN + +SW +D IACGG G +++ +
Sbjct: 11 IPNNTVLKCVSWNKDQGFIACGGEDGLLKVLK 42
>FB|FBgn0032891 [details] [associations]
symbol:Oseg5 "Oseg5" species:7227 "Drosophila melanogaster"
[GO:0042384 "cilium assembly" evidence=ISM;IEP] [GO:0031513
"nonmotile primary cilium" evidence=IDA] [GO:0035058 "nonmotile
primary cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0035058 OMA:WSRSGML
GeneTree:ENSGT00440000033499 RefSeq:NP_610064.2 UniGene:Dm.26851
ProteinModelPortal:Q9VII8 SMR:Q9VII8 STRING:Q9VII8
EnsemblMetazoa:FBtr0290042 GeneID:35349 KEGG:dme:Dmel_CG9333
UCSC:CG9333-RB CTD:35349 FlyBase:FBgn0032891 InParanoid:Q9VII8
OrthoDB:EOG4GTHV1 PhylomeDB:Q9VII8 GenomeRNAi:35349 NextBio:793104
ArrayExpress:Q9VII8 Bgee:Q9VII8 Uniprot:Q9VII8
Length = 775
Score = 105 (42.0 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 51/248 (20%), Positives = 104/248 (41%)
Query: 618 RTSEKHNILNYCTFVQWLPGSDVVVAQSRHNAC--VWYNI-DTPDRITQFPVRGDIIDVI 674
R E + I T + W ++++V H++C +WY + T + +D
Sbjct: 520 RIDEIYKIGTQLTAIMWASETNILVGV--HDSCYSIWYCPGEGASDPTIIALTTITLDTT 577
Query: 675 RENGQSEILTQDGNHQLGYELDESLIEFGTAVHDSDFGKAIL---YLESLGINKK-EAEG 730
E G+ + L + +L+ ++ +A+L + ++L I + +
Sbjct: 578 -EFGKHITIESFEESVLTFRSAGALLPVNVNMYCEILHRALLEGQWQQALKICRMGQHSS 636
Query: 731 MWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELW 790
+W LA VA + H L ++E Y+A I +L+ + P ++
Sbjct: 637 LWATLAAVATRKHQLQISEEAYSAALQIDKVSYLQHLKAL-----------TPSSAEQMA 685
Query: 791 ARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAETNNYEYNEL------- 843
+L + + AE I L +I +A+ + L+++ W AL +++ + E EL
Sbjct: 686 ENSLMLGRMLE-AETILLHGKKIEQAVGLALRMHNWRRALEISQKHKGEQPELVPRVLQE 744
Query: 844 KKKYIKWL 851
++KY+K L
Sbjct: 745 RRKYLKAL 752
Score = 86 (35.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 31/145 (21%), Positives = 63/145 (43%)
Query: 184 ALSWP--AGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVG 241
+LSW + I + G D I+++ G +F A Y T +P ++VG
Sbjct: 208 SLSWSTQSNIIASGGEDFRFKIWDAQGA--NLFTSAAEEYA---ITSVAFNPEKDYLLVG 262
Query: 242 SYDNIKLFAWSPSKSVWEEQPNK-TIPNLYTISALSWKRDGSRIACGGLCGSVELFESVL 300
+++ +KL + W + + P + +I LSW DG++ CG G + + +
Sbjct: 263 TFNLLKLC----HSNGWSYNTARFSSPRVGSIFNLSWSADGTQATCGTSTGQL-IVAYAI 317
Query: 301 KRTIWKGKFEMIYVSPSQVLVKPLS 325
++ + G + S + +K ++
Sbjct: 318 EQQLVSGNLKATSKSRKSITLKDIA 342
Score = 76 (31.8 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 46/215 (21%), Positives = 85/215 (39%)
Query: 87 NKFIQQCPVTTMVWLADGPIIYGQSDGKI-KAAHVKANKTQTLYASNSFVVALCLNVRGA 145
+K CP++ + W ++ I + D +I K + V + + + FV +
Sbjct: 23 SKSTTNCPLSCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHWLLLG 82
Query: 146 GVLSGHADGSIVRYYVTEDASNFDQQQGRVVQHPVPPYALS-----W-PAGY-ILAAGSD 198
G SG GS + D + V+ + +A + W P G +L AG D
Sbjct: 83 GRSSGGGKGSDTLLICSNDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGED 142
Query: 199 RIVTIYESDGRVHRIFDYTAPHYKEREFTVACS--SPSGQAVVV--GSYDNIKLFAWSPS 254
++ I+ G + + E ++ C+ +P+ ++V G + +IK A + S
Sbjct: 143 GVIKIWSRSGMLRSTV-------VQNEESIRCARWAPNSNSIVFCQGGHISIKPLA-ANS 194
Query: 255 KSV-WEEQPNKTIPNLYTISALSWKRDGSRIACGG 288
K + W + +LSW + IA GG
Sbjct: 195 KIIRWRAHDGLVL-------SLSWSTQSNIIASGG 222
Score = 69 (29.3 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 33/149 (22%), Positives = 60/149 (40%)
Query: 440 PNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLVKPLSG 499
P + +I LSW DG++ CG G + + +++ + G + S + +K ++
Sbjct: 285 PRVGSIFNLSWSADGTQATCGTSTGQL-IVAYAIEQQLVSGNLKATSKSRKSITLKDIA- 342
Query: 500 ESKGRGVILKSQYGYEITDVAIMGNDRYLVARTLLTEFMNPHLIS--VRLNERKQVHSQQ 557
G IL + + + G +VA T N I+ + ++ R +
Sbjct: 343 --TGTQDIL--DFPQRVVSFGL-GYGHLVVATTNQVHIYNEKYINTPIIIDGRNDTRVIE 397
Query: 558 ENKKLAYLLDLHTICVIDLITNLPTLHIN 586
KK +LD +I V T LH+N
Sbjct: 398 VGKKYFMILDALSIWVY---TYTGRLHLN 423
Score = 54 (24.1 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 38/187 (20%), Positives = 76/187 (40%)
Query: 54 FSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQ-QCPVTTMVWLADG-PIIYGQS 111
+SPD L A D +I I W ++ + +Q + + W + I++ Q
Sbjct: 129 WSPDGAGLLTAGEDGVIKI------WSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQG 182
Query: 112 DGKIKAAHVKAN-KTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVTEDASNFDQ 170
G I + AN K A + V++L + + + SG D R+ + DA +
Sbjct: 183 -GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGED---FRFKIW-DAQGANL 237
Query: 171 QQGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVAC 230
++ + A + Y+L G+ ++ + S+G + +++P F ++
Sbjct: 238 FTSAAEEYAITSVAFNPEKDYLLV-GTFNLLKLCHSNGWSYNTARFSSPRVGSI-FNLSW 295
Query: 231 SSPSGQA 237
S+ QA
Sbjct: 296 SADGTQA 302
>ZFIN|ZDB-GENE-040426-2449 [details] [associations]
symbol:ift122 "intraflagellar transport 122
homolog (Chlamydomonas)" species:7955 "Danio rerio" [GO:0035721
"intraflagellar retrograde transport" evidence=ISS] [GO:0030991
"intraflagellar transport particle A" evidence=ISS] [GO:0072372
"primary cilium" evidence=ISS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=ISS] [GO:0042995 "cell
projection" evidence=IEA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0008589 "regulation of smoothened signaling pathway"
evidence=IMP] [GO:0048593 "camera-type eye morphogenesis"
evidence=IMP] [GO:0072001 "renal system development" evidence=IMP]
[GO:0007507 "heart development" evidence=IMP] [GO:0010172
"embryonic body morphogenesis" evidence=IMP] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-2449
GO:GO:0005737 GO:GO:0007507 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005929 GO:GO:0005932 GO:GO:0010172
GO:GO:0048593 GO:GO:0060271 GO:GO:0008589 GO:GO:0072001
EMBL:BC066599 IPI:IPI00496284 RefSeq:NP_998055.1 UniGene:Dr.79009
ProteinModelPortal:Q6NYH1 GeneID:405826 KEGG:dre:405826 CTD:55764
HOVERGEN:HBG069969 NextBio:20817789 Uniprot:Q6NYH1
Length = 1187
Score = 140 (54.3 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 40/198 (20%), Positives = 94/198 (47%)
Query: 918 KAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAA 977
+A ++Y + ++ +AL Y +++D D +PK+ L ++ D +++ AA
Sbjct: 655 EAAKLYRRSGQDGRALSMYTDLRMFDYAKDFLGSADPKDTKLLMKKQADWAKNSREPRAA 714
Query: 978 INHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQH--VKTLAQHFKTVKDYKT 1035
Y+ AG++ KA+ I W V +L + + D A+ + A + ++ +
Sbjct: 715 AEMYLSAGEHLKAIQI-IGEHGW---VDMLIDVGRRLDKAERAALSRCAVFLQQLQQHGY 770
Query: 1036 AEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEA 1095
A ++YS ++ ++ W++A+++ E+H + ++ + L E ++F+EA
Sbjct: 771 AAELYSKMGDLRALLQLHVHATHWDEAFSLVEKHPQFRD--DVYVPYAQWLAEHDRFEEA 828
Query: 1096 ERLYLIIGEPDLAISMFK 1113
+R + G A+ + +
Sbjct: 829 QRAFHKAGRQAEAVRVLE 846
Score = 135 (52.6 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 71/363 (19%), Positives = 153/363 (42%)
Query: 1089 ENKFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESK 1148
+ KF EA +LY G+ A+SM+ + R ++ + + A + S+
Sbjct: 650 QGKFHEAAKLYRRSGQDGRALSMYTDLRMFDYAKDFLGSADPKDTKLLMKKQADWAKNSR 709
Query: 1149 NYKQAEKYYLDCNEWKLAIKMYRS---LNLWEDAYRIALSNGGQEAVEP-VVYLWAKSLG 1204
+ A + YL E AI++ +++ D R L + A+ V+L
Sbjct: 710 EPRAAAEMYLSAGEHLKAIQIIGEHGWVDMLIDVGR-RLDKAERAALSRCAVFLQQLQQH 768
Query: 1205 GDSAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFN 1264
G +A L +++ L + + +D AF L + + + ++V+ YA L ++ +F
Sbjct: 769 GYAA-ELYSKMGDLRALLQLHVHATHWDEAFSLVEKHPQFR-DDVYVPYAQWLAEHDRFE 826
Query: 1265 EAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFENENFSKF 1324
EA+ F KA + EA+ + Q NA + + S +L+ + E+ +
Sbjct: 827 EAQRAFHKAGRQAEAVRVL--EQLTHNAV-VESRFSDASYYYWMLSMQCLDIAREDSEQK 883
Query: 1325 ETLLLRAHKVDLIIEKYKMNHMWNDALRVCGEYVPSKLPLLQQEYEKEINTNIS------ 1378
+ +L + H + E Y H+++ R E S +P + + + N+S
Sbjct: 884 QEMLKKFHSFQHLAELY---HVYHSVHRYMSEPFSSNMPEILFNISRFLFHNLSTHTPMG 940
Query: 1379 -KDIHSLITQARQWEQNGEFYNAVECYLKIKNVDVNLMVKILNEVTQLTLKYLNHDQSYK 1437
+ +L A+Q + G + + + K++++ + + E++ LT++ + +
Sbjct: 941 ISKVDTLYALAKQSKLLGAYKVSRHAFEKLQSLKIPARYQDSVELSSLTVRSKPYRDNED 1000
Query: 1438 ILP 1440
++P
Sbjct: 1001 LIP 1003
Score = 70 (29.7 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 33/134 (24%), Positives = 61/134 (45%)
Query: 346 VAIMGNDRYLVARTPDTLLLGDL--HRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAGEL 403
+ GN R LV T D L+ L H++ + V + G+ +F + ++ +L
Sbjct: 34 IVAAGN-RVLVYDTADGTLIQPLKGHKDTVYCVAYAKDGK--RFASGSADKSIIIWTSKL 90
Query: 404 S-IIEYGNNEILTCVSI-----KLFAWSPSK-SVWE-EQPNKTIPNLYT-ISALSWKRDG 454
I++Y +N+ + CVS +L + S +W EQ + + + + I+ W DG
Sbjct: 91 EGILKYTHNDSIQCVSYNPVTHQLASCSSGDFGLWSPEQKSVSKHKVSSKITCCGWTNDG 150
Query: 455 SRIACGGLCGSVEL 468
+A G + G V +
Sbjct: 151 QYLALGMMNGVVSI 164
Score = 60 (26.2 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 37/147 (25%), Positives = 61/147 (41%)
Query: 152 ADGSIVRYYVTEDASNFDQQQGRVVQHPVPPYALSWPA-GYILAAGS-DRIVTIYESDGR 209
A G+ V Y T D + +G H Y +++ G A+GS D+ + I+ S +
Sbjct: 36 AAGNRVLVYDTADGTLIQPLKG----HKDTVYCVAYAKDGKRFASGSADKSIIIWTS--K 89
Query: 210 VHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAWSPS-KSVWEEQPNKTIPN 268
+ I YT H ++ C S + + S + WSP KSV + + + I
Sbjct: 90 LEGILKYT--HND----SIQCVSYNPVTHQLASCSSGDFGLWSPEQKSVSKHKVSSKI-- 141
Query: 269 LYTISALSWKRDGSRIACGGLCGSVEL 295
+ W DG +A G + G V +
Sbjct: 142 ----TCCGWTNDGQYLALGMMNGVVSI 164
Score = 50 (22.7 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 52 LAFSPDSTKLAVAQSDNIIFIYKLGD 77
LAF PD ++L VA + N + +Y D
Sbjct: 24 LAFRPDGSQLIVA-AGNRVLVYDTAD 48
Score = 50 (22.7 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 19/61 (31%), Positives = 25/61 (40%)
Query: 191 YILAAGSDRIVTIYESDG-RVHRIFDYTAPHYKEREFTVACS-SPSGQAVVVGSYDNIKL 248
Y++ GSDR +Y DG R+ I + A + C P VVVG D
Sbjct: 241 YMVLCGSDRQAALYTRDGVRLGSIAEQNA-------WVWTCRVKPDSNYVVVGCQDGTIA 293
Query: 249 F 249
F
Sbjct: 294 F 294
Score = 49 (22.3 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 15/69 (21%), Positives = 34/69 (49%)
Query: 233 PSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGS 292
P G ++V + + + ++ + + QP K + T+ +++ +DG R A G S
Sbjct: 28 PDGSQLIVAAGNRVLVYDTADGTLI---QPLKGHKD--TVYCVAYAKDGKRFASGSADKS 82
Query: 293 VELFESVLK 301
+ ++ S L+
Sbjct: 83 IIIWTSKLE 91
Score = 44 (20.5 bits), Expect = 4.0e-06, Sum P(3) = 4.0e-06
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 647 HNACVWYNIDTPDRITQFP 665
HN C+ Y+I T + + Q P
Sbjct: 482 HNTCLVYDIHTRELLFQEP 500
Score = 44 (20.5 bits), Expect = 0.00046, Sum P(4) = 0.00046
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 444 TISALSWKRDGSRIACGGLCGSVELFESVLK 474
T+ +++ +DG R A G S+ ++ S L+
Sbjct: 61 TVYCVAYAKDGKRFASGSADKSIIIWTSKLE 91
>WB|WBGene00000484 [details] [associations]
symbol:che-2 species:6239 "Caenorhabditis elegans"
[GO:0042384 "cilium assembly" evidence=IMP] [GO:0040024 "dauer
larval development" evidence=IGI] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=IGI]
[GO:0031513 "nonmotile primary cilium" evidence=IDA] [GO:0005198
"structural molecule activity" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0006935 GO:GO:0040024 GO:GO:0042384
GO:GO:0030512 GO:GO:0031513 OMA:WSRSGML
GeneTree:ENSGT00440000033499 EMBL:FO080171 EMBL:AJ011523
RefSeq:NP_508106.1 UniGene:Cel.19591 ProteinModelPortal:G5EGF0
SMR:G5EGF0 EnsemblMetazoa:F38G1.1.1 EnsemblMetazoa:F38G1.1.2
GeneID:180401 KEGG:cel:CELE_F38G1.1 CTD:180401 WormBase:F38G1.1
NextBio:909196 Uniprot:G5EGF0
Length = 760
Score = 102 (41.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 41/168 (24%), Positives = 77/168 (45%)
Query: 192 ILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAW 251
I+ G D +++ G++ +F+ + Y T + G VGS++ ++L
Sbjct: 201 IVTGGEDLKFKVWDGFGQI--LFNSSVHDYP---ITSISWNTDGTLFAVGSHNILRLC-- 253
Query: 252 SPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFEM 311
KS W K N ++ ALSW DG+++A G G V + KR ++ +FE+
Sbjct: 254 --DKSGWSHSLEKM--NAGSVMALSWSPDGTQLAVGTAAGLVFHAHIIDKRLTYE-EFEI 308
Query: 312 IYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVART 359
+ + + V+ +S E + K + I+ +AI+ +YL+ T
Sbjct: 309 VQTQKTVIEVRDVSSEVSRETLETKER----ISKIAILY--KYLIVVT 350
Score = 94 (38.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 39/171 (22%), Positives = 80/171 (46%)
Query: 1 LYAVKYTDVSSNVLQDDVFNLDIVRLRSEGNVAGIWAWRGQNGRKSYVVKGLAFSPDSTK 60
+Y V + SSNVL + + I L+ + VA I W+ +G ++ ++P S
Sbjct: 148 VYCVAWDSTSSNVLYCNADHCYIKSLKMQ--VAPI-KWKAHDG----IILCCDWNPTSD- 199
Query: 61 LAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLADGPIIYGQSDGKIKAAHV 120
L V +++ F K+ D +G +++ N + P+T++ W DG + S ++
Sbjct: 200 LIVTGGEDLKF--KVWDGFG--QILFNSSVHDYPITSISWNTDGTLFAVGSHNILRLCD- 254
Query: 121 KANKTQTLYASNS-FVVALCLNVRGAGVLSGHADGSIVRYYVTEDASNFDQ 170
K+ + +L N+ V+AL + G + G A G + ++ + +++
Sbjct: 255 KSGWSHSLEKMNAGSVMALSWSPDGTQLAVGTAAGLVFHAHIIDKRLTYEE 305
Score = 85 (35.0 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 29/105 (27%), Positives = 51/105 (48%)
Query: 428 KSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFEMIYV 487
KS W K N ++ ALSW DG+++A G G V + KR ++ +FE++
Sbjct: 255 KSGWSHSLEKM--NAGSVMALSWSPDGTQLAVGTAAGLVFHAHIIDKRLTYE-EFEIVQT 311
Query: 488 SPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVART 532
+ + V+ +S E + K + I+ +AI+ +YL+ T
Sbjct: 312 QKTVIEVRDVSSEVSRETLETKER----ISKIAILY--KYLIVVT 350
Score = 84 (34.6 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 704 TAVHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEICYAALGDISTTHF 763
T S + +AI S+G N + MW A +A+ N+ V EI YAAL D
Sbjct: 592 TMASQSKWDQAIRLCRSIG-N----DTMWATFAGLAVLHKNMIVMEIAYAALEDDEKVSL 646
Query: 764 LRETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENNEIH-KAIDMYLK 822
+ E IK + KE A +L + A+ + LE + + +++ + ++
Sbjct: 647 INE-IK--DKTDKETR----------QAMQVVLTGKLADAD-VLLERSGLSFRSLMLNIQ 692
Query: 823 LYKWEDALSLAETNNYEYNEL----KKKYIK 849
++KW+ AL L N ++ E+ ++KY+K
Sbjct: 693 MFKWKRALELG-LKNKQWLEIVMGYREKYLK 722
Score = 80 (33.2 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 41/182 (22%), Positives = 69/182 (37%)
Query: 111 SDGKIKAAHVKANKTQTLYASNSFVVALCL--NVRGAGVLSGHADGSIVRYYVTEDASNF 168
SDGKI + A N ALC N G G+LS DG + + S
Sbjct: 83 SDGKINILSRNGKVENMVDAHNG--AALCARWNSDGTGLLSSGEDGFVKMW------SRS 134
Query: 169 DQQQGRVVQHPVPPYALSWPAGYILAAGSDRIVTIYESDGRVHRIFDYTAP-HYKEREFT 227
+ + Q Y ++W + S ++ + + AP +K +
Sbjct: 135 GMLRSVLAQFATAVYCVAWDST------SSNVLYCNADHCYIKSLKMQVAPIKWKAHDGI 188
Query: 228 VACS--SPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRIA 285
+ C +P+ +V G D +K W + N ++ + Y I+++SW DG+ A
Sbjct: 189 ILCCDWNPTSDLIVTGGED-LKFKVWDGFGQILF---NSSVHD-YPITSISWNTDGTLFA 243
Query: 286 CG 287
G
Sbjct: 244 VG 245
>UNIPROTKB|Q9HBG6 [details] [associations]
symbol:IFT122 "Intraflagellar transport protein 122
homolog" species:9606 "Homo sapiens" [GO:0005932 "microtubule basal
body" evidence=IEA] [GO:0001843 "neural tube closure" evidence=ISS]
[GO:0010172 "embryonic body morphogenesis" evidence=ISS]
[GO:0035050 "embryonic heart tube development" evidence=ISS]
[GO:0048593 "camera-type eye morphogenesis" evidence=ISS]
[GO:0060173 "limb development" evidence=ISS] [GO:0060271 "cilium
morphogenesis" evidence=ISS] [GO:0032391 "photoreceptor connecting
cilium" evidence=ISS] [GO:0030991 "intraflagellar transport
particle A" evidence=IDA] [GO:0035721 "intraflagellar retrograde
transport" evidence=ISS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=ISS] [GO:0072372 "primary
cilium" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0019861 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:CH471052 eggNOG:COG2319 Gene3D:1.25.40.10
GO:GO:0001843 GO:GO:0005932 GO:GO:0009953 GO:GO:0042733
GO:GO:0060173 GO:GO:0010172 GO:GO:0048593 GO:GO:0032391
GO:GO:0060271 GO:GO:0035050 CTD:55764 HOVERGEN:HBG069969
EMBL:AF244930 EMBL:AF244931 EMBL:AF302154 EMBL:AK223095
EMBL:AC080007 EMBL:AL449212 EMBL:BC003045 EMBL:BC004238
IPI:IPI00066817 IPI:IPI00296605 IPI:IPI00307430 IPI:IPI01010681
PIR:T43484 RefSeq:NP_443711.2 RefSeq:NP_443715.1 RefSeq:NP_443716.1
UniGene:Hs.655284 ProteinModelPortal:Q9HBG6 SMR:Q9HBG6
IntAct:Q9HBG6 STRING:Q9HBG6 PhosphoSite:Q9HBG6 DMDM:212276436
PaxDb:Q9HBG6 PRIDE:Q9HBG6 DNASU:55764 Ensembl:ENST00000296266
Ensembl:ENST00000347300 Ensembl:ENST00000348417
Ensembl:ENST00000349441 GeneID:55764 KEGG:hsa:55764 UCSC:uc003emm.3
UCSC:uc003emn.3 GeneCards:GC03P129158 H-InvDB:HIX0003670
H-InvDB:HIX0163443 HGNC:HGNC:13556 HPA:HPA041815 MIM:218330
MIM:606045 neXtProt:NX_Q9HBG6 Orphanet:1515 PharmGKB:PA37798
HOGENOM:HOG000261131 OMA:DSPRDDN GenomeRNAi:55764 NextBio:60799
ArrayExpress:Q9HBG6 Bgee:Q9HBG6 CleanEx:HS_IFT122
Genevestigator:Q9HBG6 GermOnline:ENSG00000163913 Uniprot:Q9HBG6
Length = 1241
Score = 137 (53.3 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 49/199 (24%), Positives = 90/199 (45%)
Query: 918 KAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAA 977
+A ++Y+ + ALE Y +++ D +PK L + D K+ AA
Sbjct: 708 EAAKLYKRSGHENLALEMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNIKEPKAA 767
Query: 978 INHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQHVKTL--AQHFKTVKDYKT 1035
+ YI AG++ KA++ W V +L I K D A+ L A + K +
Sbjct: 768 VEMYISAGEHVKAIEIC-GDHGW---VDMLIDIARKLDKAEREPLLLCATYLKKLDSPGY 823
Query: 1036 AEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQ-LEEENKFKE 1094
A + Y + +V ++ +T +W++A+A+ E+H E K Q L E ++F+E
Sbjct: 824 AAETYLKMGDLKSLVQLHVETQRWDEAFALGEKH---PEFKDDIYMPYAQWLAENDRFEE 880
Query: 1095 AERLYLIIGEPDLAISMFK 1113
A++ + G A+ + +
Sbjct: 881 AQKAFHKAGRQREAVQVLE 899
Score = 135 (52.6 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 81/361 (22%), Positives = 152/361 (42%)
Query: 1089 ENKFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESK 1148
+ KF EA +LY G +LA+ M+ + +E + + A K
Sbjct: 703 QGKFHEAAKLYKRSGHENLALEMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNIK 762
Query: 1149 NYKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIALSNGGQEAV-EPVVYL--WAKSLGG 1205
K A + Y+ E AI++ W D I ++ +A EP++ + K L
Sbjct: 763 EPKAAVEMYISAGEHVKAIEICGDHG-WVDML-IDIARKLDKAEREPLLLCATYLKKLDS 820
Query: 1206 DS-AVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFN 1264
A ++ L+S + +T ++D AF L + + K ++++ YA L +N +F
Sbjct: 821 PGYAAETYLKMGDLKSLVQLHVETQRWDEAFALGEKHPEFK-DDIYMPYAQWLAENDRFE 879
Query: 1265 EAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFENENFSKF 1324
EA+ F KA + +EA+ + Q NA + +D +L Q C ++ ++
Sbjct: 880 EAQKAFHKAGRQREAVQVL--EQLTNNAVAESRFNDAAYYYWMLSMQ--CLDIAQDPAQK 935
Query: 1325 ETLLLRAHKVDLIIEKYKMNHMWN----DALRVCG-EYVPSKLPLLQQEYEKEINTNISK 1379
+T+L + + + E Y H + D V E + + L K+ + ISK
Sbjct: 936 DTMLGKFYHFQRLAELYHGYHAIHRHTEDPFSVHRPETLFNISRFLLHSLPKDTPSGISK 995
Query: 1380 DIHSLITQARQWEQNGEFYNAVECYLKIKNVDVNLMVKILNEVTQLTLKYLNHDQSYKIL 1439
+ L T A+Q + G + A Y K++ + + + E+ LT++ S +++
Sbjct: 996 -VKILFTLAKQSKALGAYRLARHAYDKLRGLYIPARFQKSIELGTLTIRAKPFHDSEELV 1054
Query: 1440 P 1440
P
Sbjct: 1055 P 1055
Score = 75 (31.5 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 33/137 (24%), Positives = 61/137 (44%)
Query: 344 TDVAIMGNDRYLVARTPDTLLLGDL--HRNLLSEVLWPDSGRNEKFYFDNVTVCLVFNAG 401
T + + R LV T D LL L H++ + V + G+ +F + ++
Sbjct: 25 TQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGK--RFASGSADKSVIIWTS 82
Query: 402 ELS-IIEYGNNEILTCVSI-----KLFAWSPSK-SVWEEQPNKTIPNLYTISAL---SWK 451
+L I++Y +N+ + CVS +L + S S +W + K++ + S + SW
Sbjct: 83 KLEGILKYTHNDAIQCVSYNPITHQLASCSSSDFGLWSPE-QKSVSKHKSSSKIICCSWT 141
Query: 452 RDGSRIACGGLCGSVEL 468
DG +A G G + +
Sbjct: 142 NDGQYLALGMFNGIISI 158
Score = 61 (26.5 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 38/147 (25%), Positives = 59/147 (40%)
Query: 152 ADGSIVRYYVTEDASNFDQQQGRVVQHPVPPYALSWPA-GYILAAGS-DRIVTIYESDGR 209
A GS + Y T D + +G H Y +++ G A+GS D+ V I+ S +
Sbjct: 30 AAGSRLLVYDTSDGTLLQPLKG----HKDTVYCVAYAKDGKRFASGSADKSVIIWTS--K 83
Query: 210 VHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAWSPS-KSVWEEQPNKTIPN 268
+ I YT H + C S + + S + WSP KSV + + + I
Sbjct: 84 LEGILKYT--HND----AIQCVSYNPITHQLASCSSSDFGLWSPEQKSVSKHKSSSKI-- 135
Query: 269 LYTISALSWKRDGSRIACGGLCGSVEL 295
SW DG +A G G + +
Sbjct: 136 ----ICCSWTNDGQYLALGMFNGIISI 158
Score = 54 (24.1 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 35 IWAWRGQNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGD 77
+ WR + + + +AF PD T+L +A ++ +Y D
Sbjct: 4 VLTWRD---KAEHCINDIAFKPDGTQLILAAGSRLL-VYDTSD 42
Score = 53 (23.7 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 191 YILAAGSDRIVTIYESDG-RVHRIFDYTAPHYKEREFTVACSS-PSGQAVVVGSYD 244
YIL GSD+ V+++ DG R+ + + + + C + P VVVG D
Sbjct: 294 YILLGGSDKQVSLFTKDGVRLGTVGE-------QNSWVWTCQAKPDSNYVVVGCQD 342
Score = 45 (20.9 bits), Expect = 0.00088, Sum P(4) = 0.00088
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 271 TISALSWKRDGSRIACGGLCGSVELFESVLK 301
T+ +++ +DG R A G SV ++ S L+
Sbjct: 55 TVYCVAYAKDGKRFASGSADKSVIIWTSKLE 85
Score = 45 (20.9 bits), Expect = 0.00088, Sum P(4) = 0.00088
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 444 TISALSWKRDGSRIACGGLCGSVELFESVLK 474
T+ +++ +DG R A G SV ++ S L+
Sbjct: 55 TVYCVAYAKDGKRFASGSADKSVIIWTSKLE 85
Score = 40 (19.1 bits), Expect = 7.4e-06, Sum P(3) = 7.4e-06
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 647 HNACVWYNIDTPDRITQFP 665
++ C+ Y+IDT + + Q P
Sbjct: 535 NDTCLVYDIDTKELLFQEP 553
>UNIPROTKB|Q9P2L0 [details] [associations]
symbol:WDR35 "WD repeat-containing protein 35" species:9606
"Homo sapiens" [GO:0030991 "intraflagellar transport particle A"
evidence=IDA] [GO:0042384 "cilium assembly" evidence=IMP]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0035085 "cilium axoneme"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005813 EMBL:CH471053
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005932
GO:GO:0042384 GO:GO:0035085 Orphanet:1515 Orphanet:93271
EMBL:AC079145 EMBL:AB037757 EMBL:AK122917 EMBL:BC036659
IPI:IPI00165984 IPI:IPI00172480 RefSeq:NP_001006658.1
RefSeq:NP_065830.2 UniGene:Hs.205427 ProteinModelPortal:Q9P2L0
SMR:Q9P2L0 IntAct:Q9P2L0 STRING:Q9P2L0 PhosphoSite:Q9P2L0
DMDM:48474987 PaxDb:Q9P2L0 PRIDE:Q9P2L0 Ensembl:ENST00000281405
Ensembl:ENST00000345530 GeneID:57539 KEGG:hsa:57539 UCSC:uc002rdi.3
UCSC:uc002rdj.3 CTD:57539 GeneCards:GC02M020110 HGNC:HGNC:29250
HPA:HPA044147 MIM:613602 MIM:613610 MIM:614091 neXtProt:NX_Q9P2L0
PharmGKB:PA134928987 eggNOG:NOG263340 HOGENOM:HOG000255527
HOVERGEN:HBG079343 InParanoid:Q9P2L0 OMA:DENHPQE OrthoDB:EOG43FGW3
PhylomeDB:Q9P2L0 GenomeRNAi:57539 NextBio:63968 ArrayExpress:Q9P2L0
Bgee:Q9P2L0 CleanEx:HS_WDR35 Genevestigator:Q9P2L0
GermOnline:ENSG00000118965 InterPro:IPR017233 PIRSF:PIRSF037536
Uniprot:Q9P2L0
Length = 1181
Score = 124 (48.7 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 67/290 (23%), Positives = 135/290 (46%)
Query: 731 MWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELW 790
+W+ LAE A+Q +L+ AE + D F++ ++G++ S+ ++ E+
Sbjct: 698 LWRLLAEAALQKLDLYTAEQAFVRCKDYQGIKFVK---RLGKLLSES------MKQAEVV 748
Query: 791 ARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAETNNYEYNE-LKKKYIK 849
+F+ AE YLE + AI + LKL W L L +T + + ++ L ++
Sbjct: 749 GYFG----RFEEAERTYLEMDRRDLAIGLRLKLGDWFRVLQLLKTGSGDADDSLLEQANN 804
Query: 850 WLTD---TRQEDKAGELYEKEGDHQTALN--YYLKANFTSKACNLVQNEPYLLENHDVVS 904
+ D RQ+ Y +G +Q L YY+ ++ NL + P ENH ++
Sbjct: 805 AIGDYFADRQKWLNAVQYYVQGRNQERLAECYYMLEDYEGLE-NLAISLP---ENHKLLP 860
Query: 905 QIVKGLIKNESYIKAGQIYEFTNENEKALE-CYRKGKVYDKCIDLTRKINPKNVTALEEE 963
+I + ++ +A + ++ + A++ C + ++K ++L + + K + +L
Sbjct: 861 EIAQMFVRVGMCEQAVTAFLKCSQPKAAVDTCVHLNQ-WNKAVELAKNHSMKEIGSLLAR 919
Query: 964 WGDHLIE-NKQYNAA-----INHYIEAGKNN-KALDTSIKAKQWKKAVQI 1006
+ HL+E NK +A N++ +A K K D +AK+ K +++
Sbjct: 920 YASHLLEKNKTLDAIELYRKANYFFDAAKLMFKIADE--EAKKGSKPLRV 967
Score = 104 (41.7 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 55/242 (22%), Positives = 99/242 (40%)
Query: 1150 YKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAV 1209
+++AE+ YL+ + LAI + L W ++ L G +A + ++ ++G A
Sbjct: 754 FEEAERTYLEMDRRDLAIGLRLKLGDWFRVLQL-LKTGSGDADDSLLEQANNAIGDYFAD 812
Query: 1210 RLLNRLSLLESCISNACDTYQFDFAFELAKI-GMKS---KLEEVHY---KYALVLEDNGQ 1262
R L+ ++ + + + L G+++ L E H + A + G
Sbjct: 813 RQ-KWLNAVQYYVQGRNQERLAECYYMLEDYEGLENLAISLPENHKLLPEIAQMFVRVGM 871
Query: 1263 FNEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFE-NENF 1321
+A T F+K ++PK A+ +H W A +A H IG +L + E N+
Sbjct: 872 CEQAVTAFLKCSQPKAAVDTCVHLNQWNKAVELAKNHSMKEIGSLLARYASHLLEKNKTL 931
Query: 1322 SKFETLLLRAHKVDLIIEKYKMNH----MWNDALRVCGEYVPSKLPLLQQEYEKEINTNI 1377
E + D +K+ + LRV YV S L L++Q +E+ N
Sbjct: 932 DAIELYRKANYFFDAAKLMFKIADEEAKKGSKPLRVKKLYVLSAL-LIEQYHEQMKNAQR 990
Query: 1378 SK 1379
K
Sbjct: 991 GK 992
Score = 84 (34.6 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 37/152 (24%), Positives = 68/152 (44%)
Query: 34 GIWAWRGQNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDD--WGDKKVICNKFIQ 91
G W N R VV+ ++++ D K+ + D + + + + WG K + K IQ
Sbjct: 103 GSWIEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIWG-KDL---KGIQ 158
Query: 92 QCPVTTMVWLADGPII-YGQSDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSG 150
VT W AD ++ +G ++G+I H+ N+ + ++ +NV GA ++G
Sbjct: 159 LSHVT---WSADSKVLLFGMANGEI---HIYDNQGNFMIKMK---LSCLVNVTGAISIAG 209
Query: 151 HADGSIVRYYVTED----ASNFDQQQGRVVQH 178
YV D A FD + ++++H
Sbjct: 210 IHWYHGTEGYVEPDCPCLAVCFDNGRCQIMRH 241
Score = 64 (27.6 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 35/171 (20%), Positives = 69/171 (40%)
Query: 265 TIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLV-KP 323
+IPN + +SW ++ IACGG G +++ + L+ K + +PS + + +
Sbjct: 10 SIPNNVKLQCVSWNKEQGFIACGGEDGLLKVLK--LETQTDDAKLRGL-AAPSNLSMNQT 66
Query: 324 LSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGR 383
L G S V+ ++ ++T N +V + ++ N V+ R
Sbjct: 67 LEGHSGSVQVVTWNEQYQKLTTSD--ENGLIIVWMLYKGSWIEEMINNRNKSVV-----R 119
Query: 384 NEKFYFDNVTVCLVFNAGELSIIEYGNNEI----LTCVSIKLFAWSPSKSV 430
+ + D +C+V+ G + + N I L + + WS V
Sbjct: 120 SMSWNADGQKICIVYEDGAVIVGSVDGNRIWGKDLKGIQLSHVTWSADSKV 170
Score = 61 (26.5 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 438 TIPNLYTISALSWKRDGSRIACGGLCGSVELFE 470
+IPN + +SW ++ IACGG G +++ +
Sbjct: 10 SIPNNVKLQCVSWNKEQGFIACGGEDGLLKVLK 42
Score = 58 (25.5 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 20/62 (32%), Positives = 27/62 (43%)
Query: 421 LFAWSPSKSVW-EEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWK 479
+ W K W EE N N + ++SW DG +I G+V + SV IW
Sbjct: 95 IIVWMLYKGSWIEEMINNR--NKSVVRSMSWNADGQKICIVYEDGAV-IVGSVDGNRIW- 150
Query: 480 GK 481
GK
Sbjct: 151 GK 152
Score = 43 (20.2 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 272 ISALSWKRDGSRIA 285
ISALSW+ G +IA
Sbjct: 306 ISALSWEGGGLKIA 319
Score = 43 (20.2 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 445 ISALSWKRDGSRIA 458
ISALSW+ G +IA
Sbjct: 306 ISALSWEGGGLKIA 319
>UNIPROTKB|F1SCU2 [details] [associations]
symbol:WDR35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR016024 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 SUPFAM:SSF48371 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005932 GO:GO:0042384 GO:GO:0035085
GeneTree:ENSGT00610000085970 OMA:DENHPQE InterPro:IPR017233
PIRSF:PIRSF037536 EMBL:CU463914 Ensembl:ENSSSCT00000009415
Uniprot:F1SCU2
Length = 1186
Score = 123 (48.4 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 69/295 (23%), Positives = 130/295 (44%)
Query: 731 MWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELW 790
+W+ LAE A+Q +L AE + D F++ +G + S+
Sbjct: 703 LWRLLAEAALQKLDLPTAEQAFVRCKDYQGIKFVK---CLGNLQSESMK----------Q 749
Query: 791 ARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAETNNYEYNE-LKKKYIK 849
A +A +F+ AE +YL + AI + LKL W L L +T + ++ L ++
Sbjct: 750 AEVAAYFGRFEEAERMYLNMDRRDLAIGLRLKLGDWFRVLQLLKTGSGAADDSLLEQAHN 809
Query: 850 WLTD---TRQEDKAGELYEKEGDHQTALN--YYLKANFTSKACNLVQNEPYLLENHDVVS 904
+ D RQ+ Y +G +Q L YY+ ++ NL + P ENH ++
Sbjct: 810 AIGDYFADRQKWLNAVQYYVQGRNQERLAECYYMLEDYEGLE-NLANSLP---ENHKLLP 865
Query: 905 QIVKGLIKNESYIKAGQIYEFTNENEKALE-CYRKGKVYDKCIDLTRKINPKNVTALEEE 963
+I + ++ +A + N+ + A++ C + ++K ++L + + K + +L
Sbjct: 866 EIAQMFVRVGMCEQAVMAFLKCNQPKAAVDTCVHLNQ-WNKAVELAKNHSMKEIGSLLAR 924
Query: 964 WGDHLIE-NKQYNAA-----INHYIEAGKNN-KALDTSIKAKQWKKAVQILQVIT 1011
+ HL+E NK +A N++ +A K K D K + V+ L V++
Sbjct: 925 YASHLLEKNKTLDAIELYRKANYFYDAAKLMFKIADEEAKKRTKPLRVKKLYVLS 979
Score = 88 (36.0 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 41/156 (26%), Positives = 71/156 (45%)
Query: 34 GIWAWRGQNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDD--WGDKKVICNKFIQ 91
G W N R VV+ ++++ D K+ + D + + + + WG K + K IQ
Sbjct: 107 GSWYEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIVGSVDGNRIWG-KDL---KGIQ 162
Query: 92 QCPVTTMVWLADGPII-YGQSDGKIKAAHVKANKTQTLYASNSFVVAL---CL-NVRGAG 146
C V W AD I+ +G ++G+I H+ N+ +F++ + CL NV GA
Sbjct: 163 LCHVA---WSADSKILLFGMANGEI---HIYDNQ-------GNFIMKMKLNCLVNVTGAI 209
Query: 147 VLSGHADGSIVRYYVTED----ASNFDQQQGRVVQH 178
++G YV D A FD + ++++H
Sbjct: 210 SIAGIHWYHGTEGYVEPDCPCLAICFDNGRCQIMRH 245
Score = 72 (30.4 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 35/171 (20%), Positives = 70/171 (40%)
Query: 265 TIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLV-KP 323
+IPN + +SW +D IACGG G +++ + L+ K + +PS + + +
Sbjct: 10 SIPNNVKLKCISWNKDQGFIACGGEDGLLKVLK--LETQTDDAKLRGL-AAPSNLSMNQT 66
Query: 324 LSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVLWPDSGR 383
L G S V+ ++ ++T N +V + G + +++ R
Sbjct: 67 LEGHSGSVQVVTWNEQYQKLTTSD--QNGLIIVWMLCRVVKTGSWYEEMINNRN-KSVVR 123
Query: 384 NEKFYFDNVTVCLVFNAGELSIIEYGNNEI----LTCVSIKLFAWSPSKSV 430
+ + D +C+V+ G + + N I L + + AWS +
Sbjct: 124 SMSWNADGQKICIVYEDGAVIVGSVDGNRIWGKDLKGIQLCHVAWSADSKI 174
Score = 66 (28.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 438 TIPNLYTISALSWKRDGSRIACGGLCGSVELFE 470
+IPN + +SW +D IACGG G +++ +
Sbjct: 10 SIPNNVKLKCISWNKDQGFIACGGEDGLLKVLK 42
Score = 40 (19.1 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 272 ISALSWKRDGSRIA 285
+SALSW+ G +IA
Sbjct: 310 MSALSWEGGGLKIA 323
Score = 40 (19.1 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 445 ISALSWKRDGSRIA 458
+SALSW+ G +IA
Sbjct: 310 MSALSWEGGGLKIA 323
>UNIPROTKB|E7EQF4 [details] [associations]
symbol:IFT122 "Intraflagellar transport protein 122
homolog" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 Gene3D:1.25.40.10 EMBL:AC080007 EMBL:AL449212
HGNC:HGNC:13556 IPI:IPI00964473 ProteinModelPortal:E7EQF4
SMR:E7EQF4 Ensembl:ENST00000507564 UCSC:uc010htc.3
ArrayExpress:E7EQF4 Bgee:E7EQF4 Uniprot:E7EQF4
Length = 1234
Score = 137 (53.3 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 49/199 (24%), Positives = 90/199 (45%)
Query: 918 KAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAA 977
+A ++Y+ + ALE Y +++ D +PK L + D K+ AA
Sbjct: 700 EAAKLYKRSGHENLALEMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNIKEPKAA 759
Query: 978 INHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQHVKTL--AQHFKTVKDYKT 1035
+ YI AG++ KA++ W V +L I K D A+ L A + K +
Sbjct: 760 VEMYISAGEHVKAIEIC-GDHGW---VDMLIDIARKLDKAEREPLLLCATYLKKLDSPGY 815
Query: 1036 AEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQ-LEEENKFKE 1094
A + Y + +V ++ +T +W++A+A+ E+H E K Q L E ++F+E
Sbjct: 816 AAETYLKMGDLKSLVQLHVETQRWDEAFALGEKH---PEFKDDIYMPYAQWLAENDRFEE 872
Query: 1095 AERLYLIIGEPDLAISMFK 1113
A++ + G A+ + +
Sbjct: 873 AQKAFHKAGRQREAVQVLE 891
Score = 136 (52.9 bits), Expect = 1.9e-05, Sum P(5) = 1.9e-05
Identities = 79/361 (21%), Positives = 152/361 (42%)
Query: 1089 ENKFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESK 1148
+ KF EA +LY G +LA+ M+ + +E + + A K
Sbjct: 695 QGKFHEAAKLYKRSGHENLALEMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNIK 754
Query: 1149 NYKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIALSNGGQEAV-EPVVYL--WAKSLGG 1205
K A + Y+ E AI++ W D I ++ +A EP++ + K L
Sbjct: 755 EPKAAVEMYISAGEHVKAIEICGDHG-WVDML-IDIARKLDKAEREPLLLCATYLKKLDS 812
Query: 1206 DS-AVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFN 1264
A ++ L+S + +T ++D AF L + + K ++++ YA L +N +F
Sbjct: 813 PGYAAETYLKMGDLKSLVQLHVETQRWDEAFALGEKHPEFK-DDIYMPYAQWLAENDRFE 871
Query: 1265 EAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFENENFSKF 1324
EA+ F KA + +EA+ + Q NA + +D + +L+ + + ++
Sbjct: 872 EAQKAFHKAGRQREAVQVL--EQLTNNAVAESRFND-AAYYYWMLSMQCLDIAQADPAQK 928
Query: 1325 ETLLLRAHKVDLIIEKYKMNHMWN----DALRVCG-EYVPSKLPLLQQEYEKEINTNISK 1379
+T+L + + + E Y H + D V E + + L K+ + ISK
Sbjct: 929 DTMLGKFYHFQRLAELYHGYHAIHRHTEDPFSVHRPETLFNISRFLLHSLPKDTPSGISK 988
Query: 1380 DIHSLITQARQWEQNGEFYNAVECYLKIKNVDVNLMVKILNEVTQLTLKYLNHDQSYKIL 1439
+ L T A+Q + G + A Y K++ + + + E+ LT++ S +++
Sbjct: 989 -VKILFTLAKQSKALGAYRLARHAYDKLRGLYIPARFQKSIELGTLTIRAKPFHDSEELV 1047
Query: 1440 P 1440
P
Sbjct: 1048 P 1048
Score = 54 (24.1 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 35 IWAWRGQNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGD 77
+ WR + + + +AF PD T+L +A ++ +Y D
Sbjct: 4 VLTWRD---KAEHCINDIAFKPDGTQLILAAGSRLL-VYDTSD 42
Score = 54 (24.1 bits), Expect = 0.00085, Sum P(3) = 0.00085
Identities = 48/218 (22%), Positives = 88/218 (40%)
Query: 39 RGQNGRK-SYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTT 97
+ Q G+K + ++ ++++P + +LA S + + L W ++ +K +
Sbjct: 136 QNQPGQKHNDAIQCVSYNPITHQLASCSSSD----FGL---WSPEQKSVSKHKSSSKIIC 188
Query: 98 MVWLADGPII-YGQSDGKIKAAHVKAN---KTQTLYASNSFVVALCLNV--RGAGVLSGH 151
W DG + G +G I + K + S S + ++C N +
Sbjct: 189 CSWTNDGQYLALGMFNGIISIRNKNGEEKVKIERPGGSLSPIWSICWNPSREERNDILAV 248
Query: 152 AD-GSIVRYYVTEDASNFDQQQGRVVQHPVPPYALSW-PAG-YILAAGSDRIVTIYESDG 208
AD G V +Y +Q G+ P +S+ G YIL GSD+ V+++ DG
Sbjct: 249 ADWGQKVSFYQLSG-----KQIGKDRALNFDPCCISYFTKGEYILLGGSDKQVSLFTKDG 303
Query: 209 -RVHRIFDYTAPHYKEREFTVACSS-PSGQAVVVGSYD 244
R+ + + + + C + P VVVG D
Sbjct: 304 VRLGTVGE-------QNSWVWTCQAKPDSNYVVVGCQD 334
Score = 53 (23.7 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 271 TISALSWKRDGSRIACGGLCGSVELF----ESVLKRTIW 305
T+ +++ +DG R A G SV ++ E +LK T W
Sbjct: 55 TVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTSW 93
Score = 53 (23.7 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 411 NEILTCVSIKLFAWSPS-KSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL 468
+++ +C S WSP KSV + + + I SW DG +A G G + +
Sbjct: 157 HQLASCSSSDFGLWSPEQKSVSKHKSSSKI------ICCSWTNDGQYLALGMFNGIISI 209
Score = 53 (23.7 bits), Expect = 0.00015, Sum P(4) = 0.00015
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 444 TISALSWKRDGSRIACGGLCGSVELF----ESVLKRTIW 478
T+ +++ +DG R A G SV ++ E +LK T W
Sbjct: 55 TVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYTSW 93
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(5) = 1.5e-05
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 647 HNACVWYNIDTPDRITQFP 665
++ C+ Y+IDT + + Q P
Sbjct: 527 NDTCLVYDIDTKELLFQEP 545
>UNIPROTKB|E1BWD7 [details] [associations]
symbol:WDR35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0035085 "cilium axoneme"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR016024 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 SUPFAM:SSF48371 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005932 GO:GO:0035085
GeneTree:ENSGT00610000085970 OMA:DENHPQE InterPro:IPR017233
PIRSF:PIRSF037536 EMBL:AADN02018563 IPI:IPI00591631
Ensembl:ENSGALT00000026583 Uniprot:E1BWD7
Length = 1180
Score = 128 (50.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 86/395 (21%), Positives = 168/395 (42%)
Query: 731 MWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKIGEVWSKENNIGDPLQCPELW 790
+W+ LAE A+Q +L AE + D F++ ++G + S+
Sbjct: 700 LWRLLAEAALQKLDLQTAEQAFVRCKDYQGIKFVK---RLGNLQSESMK----------Q 746
Query: 791 ARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDALSLAETNNYEYNE-LKKKYIK 849
A +A +F+ AE +YL+ + AI + +KL W L L +T + + ++ L ++
Sbjct: 747 AEVAAYFGRFEEAERMYLDMDRRDLAIGLRMKLGDWFRVLQLLKTGSGDSDDALLEQAHN 806
Query: 850 WLTD---TRQEDKAGELYEKEGDHQTALN--YYLKANFTSKACNLVQNEPYLLENHDVVS 904
+ D RQ+ Y +G +Q L YY+ ++ NL + P EN+ ++
Sbjct: 807 AIGDYFADRQKWLNAVQYYVQGRNQERLAECYYMLEDYQGLE-NLANSLP---ENNKLLP 862
Query: 905 QIVKGLIKNESYIKAGQIYEFTNENEKALE-CYRKGKVYDKCIDLTRKINPKNVTALEEE 963
I ++ +A + N + A++ C + ++K ++L + N K + +L
Sbjct: 863 DIAHMFVRVGMCEQAVSAFLKCNRPKDAVDTCVHLNQ-WNKAVELAKNHNMKEIGSLLAR 921
Query: 964 WGDHLIENKQYNAAI------NHYIEAGKNN-KALDTSIKAKQWKKAVQILQVITN--KQ 1014
+ HL+E + AI N++ EA K K D K + V+ L V++ +
Sbjct: 922 YATHLLEKNKILDAIELYRKANYFFEAAKLMFKIADEEAKKRTKPLRVKKLYVLSALLME 981
Query: 1015 DIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMYHQTGQ--WEKAYA-----IAE 1067
+ ++ AQ K VK +TA + + E ++ ++ W A A +A+
Sbjct: 982 QCHEQMQN-AQRGK-VKGSETASALAGL--LEEDVLSSTNRFADNAWRGAEAYHFFILAQ 1037
Query: 1068 QHLNVGEIKATFIQKCKQLEEENKFKEAERLYLII 1102
+ L G + A ++ L + A +Y ++
Sbjct: 1038 RQLYKGSVDAA-LKTALHLRDYEDIIPAVEIYSLL 1071
Score = 73 (30.8 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 29/123 (23%), Positives = 58/123 (47%)
Query: 34 GIWAWRGQNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQC 93
G W N R VV+ ++++ D K+ + D + + G G++ I K ++
Sbjct: 105 GAWYEEMINNRNKSVVRSMSWNADGQKICIVYEDGAVIV---GSVDGNR--IWGKDLKGT 159
Query: 94 PVTTMVWLADGPII-YGQSDGKIKAAHVKANKTQTLYASN-SFVVAL---CL-NVRGAGV 147
+ + W +D ++ +G ++G+I H+ Y SN +F+V + CL N+ G
Sbjct: 160 HLCHVAWSSDSKVLLFGMANGEI---HI--------YDSNGNFIVKMKLSCLVNLTGTFR 208
Query: 148 LSG 150
++G
Sbjct: 209 IAG 211
Score = 70 (29.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 19/80 (23%), Positives = 41/80 (51%)
Query: 266 IPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLV-KPL 324
IP + +SW +D IACGG G +++ + + + + K + + +PS + + + L
Sbjct: 11 IPGNVRLRCISWNKDEGFIACGGEDGLLKVLKLETQSVLDEAKIKGL-AAPSNLSMNQTL 69
Query: 325 SGESKGRGVILKSQYGYEIT 344
G S V+ ++ +++T
Sbjct: 70 EGHSGSVQVVTWNEQYHKLT 89
Score = 70 (29.7 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 19/80 (23%), Positives = 41/80 (51%)
Query: 439 IPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWKGKFEMIYVSPSQVLV-KPL 497
IP + +SW +D IACGG G +++ + + + + K + + +PS + + + L
Sbjct: 11 IPGNVRLRCISWNKDEGFIACGGEDGLLKVLKLETQSVLDEAKIKGL-AAPSNLSMNQTL 69
Query: 498 SGESKGRGVILKSQYGYEIT 517
G S V+ ++ +++T
Sbjct: 70 EGHSGSVQVVTWNEQYHKLT 89
Score = 59 (25.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 60/241 (24%), Positives = 96/241 (39%)
Query: 242 SYDNIKLFAWSPSKSVW-EEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVL 300
S N + W K W EE N N + ++SW DG +I G+V + SV
Sbjct: 91 SDQNGLIIVWIIYKGAWYEEMINNR--NKSVVRSMSWNADGQKICIVYEDGAV-IVGSVD 147
Query: 301 KRTIW----KGKF--EMIYVSPSQVLVKPLS-GE-----SKGRGVI-LKSQYGYEITDV- 346
IW KG + + S S+VL+ ++ GE S G ++ +K +T
Sbjct: 148 GNRIWGKDLKGTHLCHVAWSSDSKVLLFGMANGEIHIYDSNGNFIVKMKLSCLVNLTGTF 207
Query: 347 AIMGNDRYLVAR---TPDTLLLGDLHRNLLSEVLWPDSGRNEKFYFDNVTV-CLVFN-AG 401
I G Y PD L + N +++ ++ N + V C+ +N G
Sbjct: 208 RIAGIHWYHGTEGYVEPDCPCLAICYENGRCQIMRDENDHNPVLIDTGMNVVCIQWNHCG 267
Query: 402 ELSIIEYGNNEILTC----VSIKLFAWSPSKSVWEEQPNKTIPNLYTISALSWKRDGSRI 457
S++ + T V++ F ++P E +P ISALSW+ G +I
Sbjct: 268 --SVLALAGSLKGTSPDKDVNVVQF-YTP---FGEHLRTLKVPGKQ-ISALSWEGGGLKI 320
Query: 458 A 458
A
Sbjct: 321 A 321
Score = 42 (19.8 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 197 SDRIVTIYESDGRVHRIFDYTAPHYKE-REFTVAC 230
SD+I+ + G +HR Y+ P+ +++T+ C
Sbjct: 515 SDKILLVGRESGTIHR---YSLPNVGIIQKYTLNC 546
>WB|WBGene00000906 [details] [associations]
symbol:daf-10 species:6239 "Caenorhabditis elegans"
[GO:0046626 "regulation of insulin receptor signaling pathway"
evidence=IGI] [GO:0035058 "nonmotile primary cilium assembly"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0019861 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0035058 EMBL:Z82266 GO:GO:0046626 OMA:DSPRDDN
GeneTree:ENSGT00390000001016 EMBL:DQ360810 PIR:H88772 PIR:T21306
RefSeq:NP_501591.2 UniGene:Cel.26567 ProteinModelPortal:G5EFW7
SMR:G5EFW7 EnsemblMetazoa:F23B2.4 GeneID:184883
KEGG:cel:CELE_F23B2.4 CTD:184883 WormBase:F23B2.4 NextBio:926282
Uniprot:G5EFW7
Length = 1192
Score = 133 (51.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 41/204 (20%), Positives = 96/204 (47%)
Query: 910 LIKNESYIKAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLI 969
L + + +A +I++ +A+E + +++D ++ + + L +
Sbjct: 662 LAYTKKFREAAKIFKENGFENRAMELFTDMRMFDDVQEVMTTASGETKKMLMRKRASWAR 721
Query: 970 ENKQYNAAINHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQHVKTLAQHFKT 1029
+ Q A I +G +KA I + A++I I ++ D+ + +K L+ +F
Sbjct: 722 DANQPKIAAEMLISSGDLDKAALLIIDNDWLELAIEISHKI-DRSDL-ETMKKLSAYFIR 779
Query: 1030 VKDYKTAEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQLEEE 1089
++ A +I+ + + IVDM+ G W A+AIA++H ++ ++ + L E
Sbjct: 780 KHEFGLASRIFQSINDMKSIVDMHVNAGHWTDAFAIADRHPKY--VEDVYLPYARFLAER 837
Query: 1090 NKFKEAERLYLIIGEPDLAISMFK 1113
++F+EA++ + G+ A+ + +
Sbjct: 838 DRFEEAQKAFHRAGKEQEAMHVLE 861
Score = 126 (49.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 58/289 (20%), Positives = 119/289 (41%)
Query: 706 VHDSDFGKAILYLESLGINKKEAEGMWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLR 765
+ DF +A L + LG+ K + W+ LA A+ VA Y + D +
Sbjct: 588 IERGDFKEA-LRIACLGVVKND----WKYLANKALDALEFDVARKAYKRVRDRKMLRMVW 642
Query: 766 ETIKIGEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYK 825
E K+ K N D + L A + K+F+ A I+ EN ++A++++ +
Sbjct: 643 ELKKM-----KSNGEPDAI----LRATILAYTKKFREAAKIFKENGFENRAMELFTDMRM 693
Query: 826 WEDALSLAETNNYEYNE-LKKKYIKWLTDTRQEDKAGELYEKEGDHQTALNYYLKANFTS 884
++D + T + E + L +K W D Q A E+ GD A + ++
Sbjct: 694 FDDVQEVMTTASGETKKMLMRKRASWARDANQPKIAAEMLISSGDLDKAALLIIDNDWLE 753
Query: 885 KACNLVQNEPYLLENHDV--VSQIVKGLIKNESYIKAGQIYEFTNENEKALECYRKGKVY 942
A + + ++ D+ + ++ I+ + A +I++ N+ + ++ + +
Sbjct: 754 LAIEI----SHKIDRSDLETMKKLSAYFIRKHEFGLASRIFQSINDMKSIVDMHVNAGHW 809
Query: 943 DKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAAINHYIEAGKNNKAL 991
+ + +PK V + + L E ++ A + AGK +A+
Sbjct: 810 TDAFAIADR-HPKYVEDVYLPYARFLAERDRFEEAQKAFHRAGKEQEAM 857
Score = 65 (27.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 55/239 (23%), Positives = 94/239 (39%)
Query: 81 DKKVICNKFIQQCPVTTMVWLADGPII-YGQSDGKI---KAAHVKANKTQTLYASNSFV- 135
DK VI + + +C + W DG I G DG I K + + + N +
Sbjct: 130 DKNVIKQRSVVRC--CSCAWNTDGTIFAIGHGDGTITLRKGTNATEEPSIIIQRDNEPIW 187
Query: 136 -VALCLNVRGAGVLS-GHADG--SIVRYYVTEDASNFDQQQGRVVQHP---VPPYALSWP 188
+A N A S G+ G I+ +F G ++ P+ +S+
Sbjct: 188 GIAFSSNRTFASRDSQGNPMGIDEIMAVIDWNKTLSFYSLDGTFIESKNLEFEPHCISYC 247
Query: 189 AG--YILAAGSDRIVTIYESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDN- 245
Y+L GSD+I+ IY G + T ++V P+ Q V +G D
Sbjct: 248 LNGEYLLIGGSDKILKIYTRKG----VLLGTVAQMDHWIWSVTVR-PNSQTVAMGCVDGT 302
Query: 246 IKLF--AWSPSKSVWEEQ-PN-KTIPNLYTISALSWKRDGSRIACGGLCGSVELFESVL 300
I + +S V + N K++ +++ + L + R S I C L + L+++ L
Sbjct: 303 IACYNLVFSTVHCVDHARYANRKSMTDVF-VQNLEY-RTSSNICCHDLVKKMSLYDTKL 359
Score = 58 (25.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 24/101 (23%), Positives = 49/101 (48%)
Query: 41 QNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVW 100
+N + LAF PD ++L +A +DN ++++ + + + + +K + V T+ W
Sbjct: 14 ENNEAGVCIYDLAFKPDGSELLLA-ADNKVYLFDVNEGGQMQTLKGHKDL----VYTVAW 68
Query: 101 LADGPIIYGQSDGKIKAAHVKANKTQ-TLYASNSFVVALCL 140
+G + S G K + K + TL S++ V+ C+
Sbjct: 69 SHNGELF--ASGGADKLVILWNEKHEGTLRYSHTDVIQ-CM 106
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 21/109 (19%), Positives = 43/109 (39%)
Query: 369 HRNLLSEVLWPDSGRNEKFYFDNVT-VCLVFNAGELSIIEYGNNEILTCVSIK-----LF 422
H++L+ V W +G E F + +++N + Y + +++ C+ L
Sbjct: 59 HKDLVYTVAWSHNG--ELFASGGADKLVILWNEKHEGTLRYSHTDVIQCMMFNPCNQILL 116
Query: 423 AWSPSK-SVWEEQPNKTIPNLYTISALS--WKRDGSRIACGGLCGSVEL 468
+ ++ +W I + S W DG+ A G G++ L
Sbjct: 117 TCALNEFGLWSTADKNVIKQRSVVRCCSCAWNTDGTIFAIGHGDGTITL 165
>UNIPROTKB|F1P2U6 [details] [associations]
symbol:IFT140 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0032391 "photoreceptor connecting cilium"
evidence=IEA] [GO:0035085 "cilium axoneme" evidence=IEA]
[GO:0036064 "cilium basal body" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0032391
GO:GO:0035085 OMA:DCDKATR GeneTree:ENSGT00390000007515
EMBL:AADN02049469 IPI:IPI00576257 Ensembl:ENSGALT00000015164
Uniprot:F1P2U6
Length = 1411
Score = 142 (55.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 98/486 (20%), Positives = 190/486 (39%)
Query: 1020 VKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATF 1079
V LA ++D AE++Y C ++ + Y T QW+KA AE H V ++ T+
Sbjct: 841 VAVLAVQLGMLED---AERLYKACKRYDLLNKFYQATNQWQKAIETAEAHDRV-HLRTTY 896
Query: 1080 IQKCKQLEEENKFKEAERLYLIIGEPDLAIS-MFKNQRQ-YENMIKLVRNYXXXXXXXXX 1137
K LE A Y + M Q EN + +++
Sbjct: 897 YNYAKHLEAVGDHALALSHYEKSDTHRFEVPRMLSEDLQALENYVNKMKDKSLWKWWAQY 956
Query: 1138 XXXAQECEES-KNYKQAEKYY----LDCNEWKL--AIKMYRSLNLWEDAYRIALSNGGQE 1190
+ E + K Y A+ Y+ + C + + A ++ W +Y +A Q+
Sbjct: 957 LESQSDLESALKYYALAQDYFSLVRVHCFQGNIQKAAEIANETGNWAASYHLARQYESQD 1016
Query: 1191 AVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVH 1250
++ V+ + ++ ++A+RL C N D +L + + S E++
Sbjct: 1017 EIKQAVHFYTRAQAFNNAIRL---------CKENNLDD-------QLMNLALLSSPEDM- 1059
Query: 1251 YKYALVLEDNG-QFNEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILL 1309
+ A E+ G Q + A + KA +A+ + Q + + IA + D S +L
Sbjct: 1060 IEAACYYEEKGEQMDRAVMLYHKAGHFSKALELAFATQQFGALQLIAEDLDEKSDPALLA 1119
Query: 1310 NQSKCEFENENFSKFETLLLRAHKVDLIIEK-YKMNHMWNDALRVCGEYVPSKLPLLQQE 1368
S E+ + K LLL A K ++ K N + + V L +E
Sbjct: 1120 RCSGFFIEHAQYEKAVELLLTAKKYHEALQLCLKQNLTITEEMAE-RMTVSKDSKDLSEE 1178
Query: 1369 YEKEINTNIS-----KDIHSLITQARQWEQNGEFYNAVECYLKIKNVDVNLMVKILNEVT 1423
+E+ I+ + + + T +++ Q G A++ L+ + + + ++
Sbjct: 1179 SRRELLEQIADCCMRQGNYHMAT--KKYTQAGNKLKAMKALLRSGDTEKIVFFAGVSRQR 1236
Query: 1424 QLTLKYLNHDQS--YKILPSLVPKLMEFKQYDLAVRVYLNIDMVKEAVDIFIYTQNWNKA 1481
++ + N+ QS ++ P ++ ++ F A+ + V V+I Y QN+ KA
Sbjct: 1237 EIYIMAANYLQSLDWRKDPEIMKNIISFYTKGRALDLLAGFYDVCAQVEIDEY-QNYEKA 1295
Query: 1482 RKLCAE 1487
+ E
Sbjct: 1296 QGALTE 1301
Score = 57 (25.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 21/93 (22%), Positives = 37/93 (39%)
Query: 204 YESDGRVHRIFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAWSPSKSVWEEQPN 263
+E D + R F T+ + +A +G+ V++ D K + PN
Sbjct: 52 HEPDAHIERSFQVTSLSWHPSRLILAAGWETGEVVILNKQD----------KELHTVPPN 101
Query: 264 KTIPNLYTISALSWKRDGSRIACGGLCGSVELF 296
I+ L+W +GSR+ G G + L+
Sbjct: 102 HNAK----ITILNWSSNGSRLVSGDRHGILFLW 130
Score = 41 (19.5 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 17/90 (18%), Positives = 35/90 (38%)
Query: 581 PTLHINHDSKIDWLELNETAHKLLYRDKKMRLTLLDIRTSEKHNIL-NY---CTFVQWLP 636
P HI ++ L + + L + + +L+ + E H + N+ T + W
Sbjct: 54 PDAHIERSFQVTSLSWHPSRLILAAGWETGEVVILNKQDKELHTVPPNHNAKITILNWSS 113
Query: 637 GSDVVVAQSRHNACVWYNIDTPDRITQFPV 666
+V+ RH + +D R+ P+
Sbjct: 114 NGSRLVSGDRHGILFLWRMDQRGRVQGPPM 143
>RGD|1311341 [details] [associations]
symbol:Cirh1a "cirrhosis, autosomal recessive 1A (cirhin)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294
SMART:SM00320 RGD:1311341 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 KO:K14548 CTD:84916
HOVERGEN:HBG050963 OMA:WSRTVQK OrthoDB:EOG4JQ3X0
GeneTree:ENSGT00390000008662 HOGENOM:HOG000095656 EMBL:BC088461
IPI:IPI00363517 RefSeq:NP_001009640.1 UniGene:Rn.106235
Ensembl:ENSRNOT00000027553 GeneID:291987 KEGG:rno:291987
UCSC:RGD:1311341 InParanoid:Q5I0C9 NextBio:633564
Genevestigator:Q5I0C9 Uniprot:Q5I0C9
Length = 686
Score = 140 (54.3 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 50/178 (28%), Positives = 91/178 (51%)
Query: 46 SYVVKGL---AFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
+YV G+ A++ S +LAV+++D + IY L ++ +K + + W A
Sbjct: 13 NYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGH--ESRGTEALCW-A 69
Query: 103 DGPIIYGQS-DGKIKAAHVKA-NKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYY 160
+G ++ +G+I ++A N TL A + ++ + G+ +L G DGS+ +
Sbjct: 70 EGQRLFSAGLNGEILEYDLQALNIKYTLDAFGGPIWSMTASPSGSQLLVGCEDGSVKLFE 129
Query: 161 VTED----ASNFDQQQGRVVQHPVPPYALSW-PAGYILAAGSDRIVTIYE-SDGRVHR 212
VT D A NFD+Q+ R++ +LSW PAG +AAGS +++++ G + R
Sbjct: 130 VTPDKIQFARNFDRQKSRIL-------SLSWHPAGTHVAAGSIDYISVFDVKSGSITR 180
>UNIPROTKB|B4DEY9 [details] [associations]
symbol:IFT122 "cDNA FLJ56621, highly similar to
Intraflagellar transport 122 homolog" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001680
InterPro:IPR011990 InterPro:IPR015943 Pfam:PF00400 SMART:SM00320
GO:GO:0005737 GO:GO:0019861 Gene3D:2.130.10.10 Gene3D:1.25.40.10
InterPro:IPR011044 SUPFAM:SSF50969 HOVERGEN:HBG069969 EMBL:AC080007
EMBL:AL449212 UniGene:Hs.655284 HGNC:HGNC:13556
HOGENOM:HOG000261131 EMBL:AK293852 IPI:IPI00965471 SMR:B4DEY9
STRING:B4DEY9 Ensembl:ENST00000504021 UCSC:uc003emr.3
Uniprot:B4DEY9
Length = 1118
Score = 137 (53.3 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 49/199 (24%), Positives = 90/199 (45%)
Query: 918 KAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAA 977
+A ++Y+ + ALE Y +++ D +PK L + D K+ AA
Sbjct: 584 EAAKLYKRSGHENLALEMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNIKEPKAA 643
Query: 978 INHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQHVKTL--AQHFKTVKDYKT 1035
+ YI AG++ KA++ W V +L I K D A+ L A + K +
Sbjct: 644 VEMYISAGEHVKAIEIC-GDHGW---VDMLIDIARKLDKAEREPLLLCATYLKKLDSPGY 699
Query: 1036 AEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQ-LEEENKFKE 1094
A + Y + +V ++ +T +W++A+A+ E+H E K Q L E ++F+E
Sbjct: 700 AAETYLKMGDLKSLVQLHVETQRWDEAFALGEKH---PEFKDDIYMPYAQWLAENDRFEE 756
Query: 1095 AERLYLIIGEPDLAISMFK 1113
A++ + G A+ + +
Sbjct: 757 AQKAFHKAGRQREAVQVLE 775
Score = 136 (52.9 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 79/361 (21%), Positives = 152/361 (42%)
Query: 1089 ENKFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESK 1148
+ KF EA +LY G +LA+ M+ + +E + + A K
Sbjct: 579 QGKFHEAAKLYKRSGHENLALEMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNIK 638
Query: 1149 NYKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIALSNGGQEAV-EPVVYL--WAKSLGG 1205
K A + Y+ E AI++ W D I ++ +A EP++ + K L
Sbjct: 639 EPKAAVEMYISAGEHVKAIEICGDHG-WVDML-IDIARKLDKAEREPLLLCATYLKKLDS 696
Query: 1206 DS-AVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFN 1264
A ++ L+S + +T ++D AF L + + K ++++ YA L +N +F
Sbjct: 697 PGYAAETYLKMGDLKSLVQLHVETQRWDEAFALGEKHPEFK-DDIYMPYAQWLAENDRFE 755
Query: 1265 EAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFENENFSKF 1324
EA+ F KA + +EA+ + Q NA + +D + +L+ + + ++
Sbjct: 756 EAQKAFHKAGRQREAVQVL--EQLTNNAVAESRFND-AAYYYWMLSMQCLDIAQADPAQK 812
Query: 1325 ETLLLRAHKVDLIIEKYKMNHMWN----DALRVCG-EYVPSKLPLLQQEYEKEINTNISK 1379
+T+L + + + E Y H + D V E + + L K+ + ISK
Sbjct: 813 DTMLGKFYHFQRLAELYHGYHAIHRHTEDPFSVHRPETLFNISRFLLHSLPKDTPSGISK 872
Query: 1380 DIHSLITQARQWEQNGEFYNAVECYLKIKNVDVNLMVKILNEVTQLTLKYLNHDQSYKIL 1439
+ L T A+Q + G + A Y K++ + + + E+ LT++ S +++
Sbjct: 873 -VKILFTLAKQSKALGAYRLARHAYDKLRGLYIPARFQKSIELGTLTIRAKPFHDSEELV 931
Query: 1440 P 1440
P
Sbjct: 932 P 932
Score = 54 (24.1 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 35 IWAWRGQNGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGD 77
+ WR + + + +AF PD T+L +A ++ +Y D
Sbjct: 4 VLTWRD---KAEHCINDIAFKPDGTQLILAAGSRLL-VYDTSD 42
Score = 54 (24.1 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 45/197 (22%), Positives = 76/197 (38%)
Query: 59 TKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLADGPII-YGQSDGKIKA 117
T VA + +++ I L W ++ +K + W DG + G +G I
Sbjct: 55 TVYCVAYAKDVLCIEGL---WSPEQKSVSKHKSSSKIICCSWTNDGQYLALGMFNGIISI 111
Query: 118 AHVKAN---KTQTLYASNSFVVALCLNV--RGAGVLSGHAD-GSIVRYYVTEDASNFDQQ 171
+ K + S S + ++C N + AD G V +Y +Q
Sbjct: 112 RNKNGEEKVKIERPGGSLSPIWSICWNPSREERNDILAVADWGQKVSFYQLSG-----KQ 166
Query: 172 QGRVVQHPVPPYALSW-PAG-YILAAGSDRIVTIYESDG-RVHRIFDYTAPHYKEREFTV 228
G+ P +S+ G YIL GSD+ V+++ DG R+ + + + +
Sbjct: 167 IGKDRALNFDPCCISYFTKGEYILLGGSDKQVSLFTKDGVRLGTVGE-------QNSWVW 219
Query: 229 ACSS-PSGQAVVVGSYD 244
C + P VVVG D
Sbjct: 220 TCQAKPDSNYVVVGCQD 236
Score = 44 (20.5 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 251 WSPS-KSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL 295
WSP KSV + + + I SW DG +A G G + +
Sbjct: 72 WSPEQKSVSKHKSSSKI------ICCSWTNDGQYLALGMFNGIISI 111
Score = 44 (20.5 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 424 WSPS-KSVWEEQPNKTIPNLYTISALSWKRDGSRIACGGLCGSVEL 468
WSP KSV + + + I SW DG +A G G + +
Sbjct: 72 WSPEQKSVSKHKSSSKI------ICCSWTNDGQYLALGMFNGIISI 111
>UNIPROTKB|H0Y9Q2 [details] [associations]
symbol:IFT122 "Intraflagellar transport protein 122
homolog" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR015943 InterPro:IPR019734 Pfam:PF13176
GO:GO:0005737 Gene3D:2.130.10.10 InterPro:IPR011044 SUPFAM:SSF50969
EMBL:AC080007 EMBL:AL449212 HGNC:HGNC:13556 Ensembl:ENST00000509522
Bgee:H0Y9Q2 Uniprot:H0Y9Q2
Length = 380
Score = 133 (51.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 47/183 (25%), Positives = 84/183 (45%)
Query: 918 KAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAA 977
+A ++Y+ + ALE Y +++ D +PK L + D K+ AA
Sbjct: 205 EAAKLYKRSGHENLALEMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNIKEPKAA 264
Query: 978 INHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQHVKTL--AQHFKTVKDYKT 1035
+ YI AG++ KA++ W V +L I K D A+ L A + K +
Sbjct: 265 VEMYISAGEHVKAIEIC-GDHGW---VDMLIDIARKLDKAEREPLLLCATYLKKLDSPGY 320
Query: 1036 AEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQ-LEEENKFKE 1094
A + Y + +V ++ +T +W++A+A+ E+H E K Q L E ++F+E
Sbjct: 321 AAETYLKMGDLKSLVQLHVETQRWDEAFALGEKH---PEFKDDIYMPYAQWLAENDRFEE 377
Query: 1095 AER 1097
A++
Sbjct: 378 AQK 380
>UNIPROTKB|Q969X6 [details] [associations]
symbol:CIRH1A "Cirhin" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006351
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14548 EMBL:AB075868
EMBL:AK027419 EMBL:AK027445 EMBL:AK027584 EMBL:AK027634
EMBL:AK027675 EMBL:AK074795 EMBL:BC000167 EMBL:BC009348
IPI:IPI00239815 IPI:IPI00399195 IPI:IPI00399197 RefSeq:NP_116219.2
UniGene:Hs.461113 ProteinModelPortal:Q969X6 SMR:Q969X6
IntAct:Q969X6 STRING:Q969X6 PhosphoSite:Q969X6 DMDM:41016916
SWISS-2DPAGE:Q969X6 PaxDb:Q969X6 PRIDE:Q969X6
Ensembl:ENST00000314423 Ensembl:ENST00000352319
Ensembl:ENST00000563094 GeneID:84916 KEGG:hsa:84916 UCSC:uc002ewr.2
UCSC:uc002ews.4 UCSC:uc010cfi.3 CTD:84916 GeneCards:GC16P069166
HGNC:HGNC:1983 HPA:HPA041139 MIM:604901 MIM:607456
neXtProt:NX_Q969X6 Orphanet:168583 PharmGKB:PA26520
HOVERGEN:HBG050963 InParanoid:Q969X6 OMA:WSRTVQK OrthoDB:EOG4JQ3X0
PhylomeDB:Q969X6 ChiTaRS:CIRH1A GenomeRNAi:84916 NextBio:75316
Bgee:Q969X6 CleanEx:HS_CIRH1A Genevestigator:Q969X6
GermOnline:ENSG00000141076 Uniprot:Q969X6
Length = 686
Score = 135 (52.6 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 47/182 (25%), Positives = 94/182 (51%)
Query: 46 SYVVKGL---AFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
+YV G+ A++ S +LAV+++D + IY L ++ +K + + W A
Sbjct: 13 NYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGH--ESRATEALCW-A 69
Query: 103 DGPIIYGQS-DGKIKAAHVKANKTQTLYASNSF---VVALCLNVRGAGVLSGHADGSIVR 158
+G ++ +G+I ++A + YA ++F + ++ + G+ +L G DGS+
Sbjct: 70 EGQRLFSAGLNGEIMEYDLQALNIK--YAMDAFGGPIWSMAASPSGSQLLVGCEDGSVKL 127
Query: 159 YYVTEDA----SNFDQQQGRVVQHPVPPYALSW-PAGYILAAGSDRIVTIYE--SDGRVH 211
+ +T D NFD+Q+ R++ +LSW P+G +AAGS +++++ S VH
Sbjct: 128 FQITPDKIQFERNFDRQKSRIL-------SLSWHPSGTHIAAGSIDYISVFDVKSGSAVH 180
Query: 212 RI 213
++
Sbjct: 181 KM 182
>UNIPROTKB|F1N0G0 [details] [associations]
symbol:F1N0G0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060349 "bone morphogenesis" evidence=IEA] [GO:0060271
"cilium morphogenesis" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005813 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005929 InterPro:IPR011044 SUPFAM:SSF50969
OMA:WSRSGML GeneTree:ENSGT00440000033499 EMBL:DAAA02002421
EMBL:DAAA02002422 EMBL:DAAA02002423 EMBL:DAAA02002424
EMBL:DAAA02002425 IPI:IPI00904280 Ensembl:ENSBTAT00000044761
Uniprot:F1N0G0
Length = 764
Score = 124 (48.7 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 67/279 (24%), Positives = 121/279 (43%)
Query: 602 KLLYRDKKMRLTLLDI-RTSEKHNILNYCTFVQWLPGSD---VVVAQSRHNACVWYNIDT 657
K+ + DK L + + R ++ I+ T V L SD ++ VWY +T
Sbjct: 465 KIAFIDKNRDLYITSVKRFGKEEQIIKLGTMVHTLAWSDTCNILCGLQDTRFTVWYYPNT 524
Query: 658 P--DRITQFPVRGDIIDVIRENGQSEILTQDGNHQLGYELDESLIEFGTAVHDS---DFG 712
DR P D + I++ GN D SL+ + + + ++
Sbjct: 525 VYVDRDI-LPKTLYERDASEFSKNPHIVSFVGNQVTIRRADGSLVHISISPYPAILHEYV 583
Query: 713 KAILYLESLGINK--KEAEGMWQNLAEVAIQLHNLHVAEICYAALGDISTTHFLRETIKI 770
+ + +++ + + KE + MW LA +A+ ++ AEI YAA+G+I ++ +IK
Sbjct: 584 SSSKWEDAVRLCRFVKE-QTMWACLAAMAVANQDMTTAEIAYAAIGEIDKVQYIN-SIK- 640
Query: 771 GEVWSKENNIGDPLQCPELWARMAILNKQFKVAEGIYLENNEIHKAIDMYLKLYKWEDAL 830
+ SKE+ + A + + + + AE + L+ +++AI + + LY WE AL
Sbjct: 641 -NLPSKESKM----------AHILMFSGNIQEAEIVLLQAGLVYQAIQININLYNWERAL 689
Query: 831 SLAETNNYEYNELKKKYIKWL-TDTRQEDKAGELYEKEG 868
LA + + K+L T +QE L EG
Sbjct: 690 ELAVKYKTHVDTVLAYRQKFLETFGKQETNKRYLQYAEG 728
Score = 63 (27.2 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 28/117 (23%), Positives = 54/117 (46%)
Query: 267 PNLYTISALSWKRDGSRIACGGLCGSVEL-FESVLK-RTIWKGKFEMIYVSPSQVLVKPL 324
PN +I ++W DG++IA G CG+ + F V++ R WK F++ + V+ +
Sbjct: 254 PNTGSIFNIAWSVDGTQIA--GACGNGHVVFAHVVEQRWEWKN-FQVTLTKRRTMQVRNV 310
Query: 325 SGES----KGRGVILKSQYGYEITDVAIMGNDRYLVARTPDTLLLGDLHRNLLSEVL 377
++ + R ++K+ Y V+ + +T L+ DL +S +L
Sbjct: 311 LNDAVDLLEFRDRVIKASLNYAHLVVSTSLQCYVFSTKNWNTPLIFDLKEGTVSLIL 367
Score = 59 (25.8 bits), Expect = 0.00023, Sum P(4) = 0.00023
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 440 PNLYTISALSWKRDGSRIACGGLCGSVEL-FESVLK-RTIWK 479
PN +I ++W DG++IA G CG+ + F V++ R WK
Sbjct: 254 PNTGSIFNIAWSVDGTQIA--GACGNGHVVFAHVVEQRWEWK 293
Score = 51 (23.0 bits), Expect = 0.00023, Sum P(4) = 0.00023
Identities = 19/75 (25%), Positives = 34/75 (45%)
Query: 307 GKFEMIYVSPSQVLVKPLSGESKGRGVILKSQYGYEITDVAIMGNDRYLVARTPDTLLLG 366
GKF +I S + K + S G +L ++ YE T + +G D + + +L
Sbjct: 75 GKFHLI--SKLGRVEKSVEAHS---GAVLAGRWNYEGTALVTVGEDGQIKIWSKTGMLRS 129
Query: 367 DL-HRNL-LSEVLWP 379
L H+ + + + WP
Sbjct: 130 TLAHQGMSVYSITWP 144
Score = 44 (20.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 19/78 (24%), Positives = 32/78 (41%)
Query: 111 SDGKIKAAHVKANKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYYVTEDASNFDQ 170
SDGK +++ A + V+A N G +++ DG I + T +
Sbjct: 73 SDGKFHLISKLGRVEKSVEAHSGAVLAGRWNYEGTALVTVGEDGQIKIWSKTGMLRSTLA 132
Query: 171 QQGRVVQHPVPPYALSWP 188
QG V Y+++WP
Sbjct: 133 HQGMSV------YSITWP 144
Score = 39 (18.8 bits), Expect = 0.00023, Sum P(4) = 0.00023
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 608 KKMRLTLLDIRTSEKHNILN 627
K ++TL RT + N+LN
Sbjct: 293 KNFQVTLTKRRTMQVRNVLN 312
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 126 (49.4 bits), Expect = 0.00025, P = 0.00025
Identities = 65/282 (23%), Positives = 116/282 (41%)
Query: 42 NGRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWL 101
+G S V + F+P T +A D IF++++ D + V+ + + + W
Sbjct: 50 SGHPSAVYT-MKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKG---HKNAILDLHWT 105
Query: 102 ADGP-IIYGQSDGKIKAAHVKANKT-QTLYASNSFVVALCLNVRGAG-VLSGHADGSIVR 158
+DG I+ D ++A V+ K + + +SFV + C RG ++SG DG+
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGT--- 162
Query: 159 YYVTEDASNFDQQQGRVVQ-----HPVPPYALSWPAGYILAAGSDRIVTIYE-SDGRVHR 212
A +D +Q +Q + + + S A I G D V +++ G
Sbjct: 163 ------AKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATM 216
Query: 213 IFDYTAPHYKEREFTVACSSPSGQAVVVGSYDNIKLFAW-----SPSK---SVWEEQPNK 264
+ H + T SP G ++ DN KL W +P ++E +
Sbjct: 217 TLE---GH--QDTITGMSLSPDGSYLLTNGMDN-KLCVWDMRPYAPQNRCVKIFEGHQHN 270
Query: 265 TIPNLYTISALSWKRDGSRIACGGLCGSVELFESVLKRTIWK 306
NL S W DG+++ G V ++++ +RTI+K
Sbjct: 271 FEKNLLKCS---WSPDGTKVTAGSSDRMVHIWDTTSRRTIYK 309
>DICTYBASE|DDB_G0290503 [details] [associations]
symbol:DDB_G0290503 species:44689 "Dictyostelium
discoideum" [GO:0005543 "phospholipid binding" evidence=IEA]
InterPro:IPR001849 PROSITE:PS50003 SMART:SM00233
dictyBase:DDB_G0290503 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 eggNOG:NOG12793 EMBL:AAFI02000164
RefSeq:XP_635612.1 HSSP:P11978 ProteinModelPortal:Q54G05
PRIDE:Q54G05 EnsemblProtists:DDB0188916 GeneID:8627684
KEGG:ddi:DDB_G0290503 OMA:FNSKKQQ Uniprot:Q54G05
Length = 1492
Score = 134 (52.2 bits), Expect = 0.00026, P = 0.00026
Identities = 206/1007 (20%), Positives = 429/1007 (42%)
Query: 677 NGQSEILTQDGNHQLGYELDESLIEFGTAVHDSDFGKAILYLESLGINK-KEAEGMWQNL 735
N Q EI + N+Q+ EL++++ + +++ D I L I+K KE E +
Sbjct: 368 NQQHEI-DNNKNNQMILELNDNISKISNQLNEKD--NKIQELSKQSIDKQKEIENSTSSS 424
Query: 736 AEVAIQLHNLHVAEICYAALGDIST-THFLRETI-KIGEVWSKENNIGDPLQCPELWARM 793
++ ++L++ ++ L DI+ ++ L++ +I E+ +K N + L +
Sbjct: 425 DQLQLKLND--ISNELLEKLNDINQLSNKLQDKENQILEINNKLNEKENQLISKDNQLNQ 482
Query: 794 AILNKQFKVAEGIYLENNEIHKAI-DMYLKLYKWEDALSLAETNNYEYNELKKKYIKWLT 852
I N + E + L+ N++ + + KL + ++ ++N NE + K I L
Sbjct: 483 LIENNESSSDE-LKLKLNQLSDELQEKDEKLLNNQSVINELQSN---LNENQNK-INELI 537
Query: 853 DTRQED------KAGELYEKEGDHQTALNYYLKANFTSKACNLVQNEPYLLENHDVVSQI 906
+ Q K +L +K + L L+++ + + Q + L E D ++++
Sbjct: 538 ENNQSSSDELKLKLNQLSDKLQEKDEKLKS-LESSIIERDEKIDQLQDNLNEKQDKINEL 596
Query: 907 VKGLIKNESYIKAGQIY---EFTNENEKALECYRK-GKVYDKCIDLTRKINP--KNVTAL 960
V+ + +++ I + ++EK L ++ + KIN +N +
Sbjct: 597 VENNESSSDELQSKLIQLSDQLQEKDEKLLNNQSIINELQSNLNENQNKINELIENNQSS 656
Query: 961 EEEWGDHLI----ENKQYNAAINHYIEAG--KNNKALDTSIKAKQWKKAVQILQVITNKQ 1014
+E LI E K N + +E +N LD I++ Q V LQ N++
Sbjct: 657 SDELNSKLIKLSDELKDKNENVRS-LETSIIENQDKLDQLIQSNQ--VTVNELQSKLNEK 713
Query: 1015 DIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGE 1074
+I ++ L ++ ++ D + K+ + Q+++ +Q+ E + E+H + E
Sbjct: 714 EI--NINQLIENNQSSLD-ELQSKLNEKQNEINQLIEN-NQSSSDELQSKLNEKHQEISE 769
Query: 1075 IKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYXXXXXX 1134
+++ K +L E N+ E +I D + + +++I + N
Sbjct: 770 LQS----KLNELIENNESSSDELQSKLIQLSDELKEKDEKLKSLDSII--IENQEKLVQL 823
Query: 1135 XXXXXXAQECEESK-NYKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIALSNGGQEAVE 1193
+ + +SK N KQ E L N + ++ LN ++ + + N + E
Sbjct: 824 TKSNQDSLDELQSKLNEKQNEINELIENNQSSSNELQSKLNEKQNEINLLIENNQSSSDE 883
Query: 1194 PVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKY 1253
L K L ++L+ ++ I+ + E + ++SKL ++ +
Sbjct: 884 LQSKLNEKH---QEINELQSKLNEKQNKINELVENN------ESSSDELQSKLIQLSDQ- 933
Query: 1254 ALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDIL--LNQ 1311
+ E Q E+ I+ ++ + + N+ ++I E++ +S+ ++ LN+
Sbjct: 934 --LQEKENQLKSFESSIIERDEKLNQLQSKL-NEKQNEIDQIT-ENNQSSLDELQSNLNE 989
Query: 1312 SKCEFEN---ENFSKFETLLLRAH-KVDLIIEK-YKMNHM--WNDALRVCGEYVPSKLPL 1364
+ E N S + L + + K++ I EK K+N + N++L + SK
Sbjct: 990 KQNEINQLIENNQSSLDELQSKLNEKLNEINEKDNKINELIQTNESL---SKDQQSKFEN 1046
Query: 1365 LQQEYEKEINTNISKDIHSLITQAR-QWEQNGEFYNAVECYLKIKNVDV-NLMVKILNEV 1422
L+QE E++ N + D++S I Q+ + N ++ L K+ ++ N KI++
Sbjct: 1047 LEQELEEKNNKIL--DLNSQIIDVNHQFSEKENELNQLQLKLIEKDQEIENQNNKIIDIN 1104
Query: 1423 TQLTLKY----LNHDQSYKILPS--LVPKLMEFKQYDLAVRVYLNIDMVKEAVDIFIYTQ 1476
QL K +N+D + L+ +L E K DL + L D V E D +
Sbjct: 1105 NQLNEKEKEININNDNDNNNEENIQLIEELKE-KLQDLENELNLEKDTVNEKNDDINELK 1163
Query: 1477 NWNK--ARKLCAELKPEYLSYVENQYKEWLKK-NGDADMLSEID---------IN---TA 1521
K + KL +E K + L+ + N Y E L + N D++ ++ IN
Sbjct: 1164 EEIKLISEKL-SE-KEQELNEMINDYDESLNEINDQKDLVKSLNERLTNAHLKINEKDNE 1221
Query: 1522 LDMLMKQGQWNQCLDKAKNINTNLLHKY--MALYAMHLIKNKEYAQLTQLFNEYGTPNIP 1579
+ L K+G +N+ + N+ TN L + + + +I + E QL + + E + +
Sbjct: 1222 IHSLSKEG-FNE-IQSQLNLITNQLSEKDNLLIEKSQIISDLEL-QLRESYKERSSSS-- 1276
Query: 1580 QFYNIYKQTAYCILNDSNENVNLIISLRNMLFNVIKNQNNNEEIDKQ 1626
++++Q + SN N LI+ + + N +K +N +++++Q
Sbjct: 1277 ---SLHQQQQMISPDLSNSNDELIVE-KEEIINELKEKN--QQLEQQ 1317
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 129 (50.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 45/177 (25%), Positives = 80/177 (45%)
Query: 39 RGQNGRKSYVVKGLAFSP-DSTKLAVAQSDNIIFIYKLGDDWGDKK--VICNKFIQQCPV 95
RG+N SY +A+S DS LA A ++ ++ ++ L +G +K ++ N+ +
Sbjct: 58 RGKNQNLSYSANDVAWSTLDSNLLATAATNGVVSVWDLSK-FGRQKQLLVYNEHERTAHT 116
Query: 96 TTMVWLADGPIIYGQSDGKIKAAHVKANKTQTLYASNSFVVA-LCLNVRGAGVLSGHADG 154
T +I G DG IK ++++K+ Y NS V + + + S ++
Sbjct: 117 VTFHSSEPNILISGSQDGTIKCFDIRSDKSINTYFCNSESVRDVKFSPHTQNIFSAVSEN 176
Query: 155 SIVRYYVTEDASNFDQQQGRVVQHPVPPYALSW-PAGYILAAGS-DRIVTIYESDGR 209
V+ + D +D+ + H P Y W P LA GS D+ + ++ DGR
Sbjct: 177 GTVQLW---DMRKWDKCMVQFTAHYGPVYTCDWHPTRNWLATGSRDKQIKVWNMDGR 230
Score = 53 (23.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 1269 QFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFENENFSKFETL 1327
Q + N P+ A + + N D + EH PTS ++L++++ E F FE L
Sbjct: 498 QDLNGNTPETAHEIDVANVDDDTLGSSGVEHPPTS--SVILSETQIISEI-TFDNFELL 553
>FB|FBgn0260933 [details] [associations]
symbol:rempA "reduced mechanoreceptor potential A"
species:7227 "Drosophila melanogaster" [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0035058 "nonmotile primary cilium assembly"
evidence=ISS;IMP] [GO:0031513 "nonmotile primary cilium"
evidence=IDA] [GO:0042384 "cilium assembly" evidence=ISM;IEP]
[GO:0042073 "intraflagellar transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR011990
InterPro:IPR015943 PROSITE:PS50294 SMART:SM00320 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0007605 Gene3D:1.25.40.10
GO:GO:0042073 GO:GO:0035058 GeneTree:ENSGT00390000007515
UniGene:Dm.36349 DNASU:33230 GeneID:33230 KEGG:dme:Dmel_CG11838
CTD:33230 FlyBase:FBgn0260933 ChiTaRS:rempA GenomeRNAi:33230
NextBio:782561 RefSeq:NP_995608.1 ProteinModelPortal:Q7KTZ4
STRING:Q7KTZ4 PRIDE:Q7KTZ4 EnsemblMetazoa:FBtr0078078
UCSC:CG11838-RB InParanoid:Q7KTZ4 OMA:HRAGMLH PhylomeDB:Q7KTZ4
ArrayExpress:Q7KTZ4 Bgee:Q7KTZ4 Uniprot:Q7KTZ4
Length = 1503
Score = 147 (56.8 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 121/595 (20%), Positives = 229/595 (38%)
Query: 1002 KAVQILQVITNKQDIAQHVKT--LAQHFKTVKDYKTAEKIYSHCDMHEQIVDMYHQTGQW 1059
++V+ L+ D+ K LA +++ A+ +Y C + + + G
Sbjct: 863 RSVRALRQAIEDDDLETEAKVAVLAIELGMIEE---AKDLYRRCKRFDLLNKLLQSIGHL 919
Query: 1060 EKAYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAERLYLIIGEPDLAISMFKNQRQYE 1119
++A +AE + +K T+ QK ++L E K A + P I+ Q E
Sbjct: 920 DEAVELAEAEDRI-HLKHTYYQKAQELRERGDIKGALEYFEKTQNPAQNIT----QLLLE 974
Query: 1120 NMIKLVRNYXXXXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMYRSLNLWEDA 1179
N + R Q E S + A Y +W +K+ L A
Sbjct: 975 NPGAMKRYIQTTSDPKLLKWWGQYIESSGDMDAALAVYHKAEDWFSQVKILCYLGKISKA 1034
Query: 1180 YRIALSNGGQEAVEPVVYLWAKSLGG-DSAVRLLNRLSLLESCISNACDTYQFDFAFELA 1238
IA +G + A + + +++G A+ R + I C + DF EL
Sbjct: 1035 DAIARQSGDRAACYHLARHY-ENVGKFQEAIMFFTRAQTFSNAI-RICK--ENDFQEELW 1090
Query: 1239 KIGMKSKLEEVHYKYALVLEDNGQFNEAETQFIKANKPKEAISMYIHNQDWENAERIANE 1298
+ S+ + A E+ G F A + +A +A+ M +Q E E IA++
Sbjct: 1091 TVASSSRQRDKAIA-AAYFEECGNFKHAVELYHRAGMLHKALEMAFESQQPEILEIIASD 1149
Query: 1299 HDPTSIGDILLNQSKCEFENENFSKFETLLLRAHKVDLIIEKYKMNHMWNDALRVCGEY- 1357
P S +++ ++C + F E H L+ K H+ AL +C E
Sbjct: 1150 LAPDSDAELI---NRCA---DFFCSIEQFQKAVH---LLA---KTRHL-ERALGICSEKG 1196
Query: 1358 VPSKLPLLQQ------EYEKEINTNISKDIHSLITQ-------ARQWEQNGEFYNAVECY 1404
VP L + E+E+ +I + + Q +++ Q G+ A++
Sbjct: 1197 VPVTEELSEMLTPEKGEFEEATRVHILVQLGEFLQQQGDYHSATKKFTQAGDKIRAMKSL 1256
Query: 1405 LKIKNVDVNLMVKILNEVTQLTLKYLNHDQS--YKILPSLVPKLMEFKQYDLAVRVYLNI 1462
LK N D + ++ ++ + N+ Q+ ++ P ++ ++ F A N
Sbjct: 1257 LKSGNTDKIIFFANMSRQREVYIMAANYLQALDWQSDPQVLKHIVTFYTKGQAFDSLANF 1316
Query: 1463 DMVKEAVDIFIYTQNWNKARKLCAELKP--EYLSYVENQYKEWLKKNGDADMLSEIDINT 1520
+ ++I + Q++ KA E E LS+ ++ Y L++ AD+ + ++I
Sbjct: 1317 YAICAQIEIEEF-QDYGKALTAMQEASKCLEKLSHAQHVYNN-LQRTV-ADVKAILEIQQ 1373
Query: 1521 AL---DMLMKQGQWNQCLDKAKNINTNLLHKYMALYAMHLIKNKEYAQLTQLFNE 1572
AL D + G L K + H +A+ L+ K+Y++ + E
Sbjct: 1374 ALREGDHQLVIGSCRSMLIKPELPPIRHAH-ILAMLIRALVYVKDYSEAGRALKE 1427
Score = 40 (19.1 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 441 NLYTISALSWKRDGSRI 457
N+YT WKR GSR+
Sbjct: 394 NVYT-----WKRSGSRL 405
>UNIPROTKB|Q5R994 [details] [associations]
symbol:DKFZp459B1739 "Putative uncharacterized protein
DKFZp459B1739" species:9601 "Pongo abelii" [GO:0005730 "nucleolus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294 SMART:SM00320
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR011047
SUPFAM:SSF50998 KO:K14548 CTD:84916 HOVERGEN:HBG050963
HOGENOM:HOG000095656 EMBL:CR859497 RefSeq:NP_001125977.1
UniGene:Pab.18989 ProteinModelPortal:Q5R994 GeneID:100172915
KEGG:pon:100172915 InParanoid:Q5R994 Uniprot:Q5R994
Length = 686
Score = 127 (49.8 bits), Expect = 0.00057, P = 0.00057
Identities = 46/182 (25%), Positives = 93/182 (51%)
Query: 46 SYVVKGL---AFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
+YV G+ A++ S +LAV+++D + IY L ++ +K + + W A
Sbjct: 13 NYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGH--ESRATEALCW-A 69
Query: 103 DGPIIYGQS-DGKIKAAHVKANKTQTLYASNSF---VVALCLNVRGAGVLSGHADGSIVR 158
+G ++ +G+I ++A + YA ++F + ++ + G+ +L G DGS+
Sbjct: 70 EGQRLFSAGLNGEIMEYDLQALNIK--YAMDAFGGPIWSMAASPSGSQLLVGCEDGSVKL 127
Query: 159 YYVTEDA----SNFDQQQGRVVQHPVPPYALSW-PAGYILAAGSDRIVTIYE--SDGRVH 211
+ +T D NFD+Q+ R++ +LSW +G +AAGS +++++ S VH
Sbjct: 128 FQITPDKIQFERNFDRQKSRIL-------SLSWHSSGTHIAAGSIDYISVFDVKSGSAVH 180
Query: 212 RI 213
++
Sbjct: 181 KM 182
>UNIPROTKB|E9PDG2 [details] [associations]
symbol:IFT122 "Intraflagellar transport protein 122
homolog" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001680 InterPro:IPR011990
InterPro:IPR015943 Pfam:PF00400 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 Gene3D:1.25.40.10 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AC080007 EMBL:AL449212 HGNC:HGNC:13556
IPI:IPI00908370 ProteinModelPortal:E9PDG2 SMR:E9PDG2
Ensembl:ENST00000440957 UCSC:uc011bky.2 ArrayExpress:E9PDG2
Bgee:E9PDG2 Uniprot:E9PDG2
Length = 1032
Score = 137 (53.3 bits), Expect = 0.00059, Sum P(3) = 0.00059
Identities = 49/199 (24%), Positives = 90/199 (45%)
Query: 918 KAGQIYEFTNENEKALECYRKGKVYDKCIDLTRKINPKNVTALEEEWGDHLIENKQYNAA 977
+A ++Y+ + ALE Y +++ D +PK L + D K+ AA
Sbjct: 499 EAAKLYKRSGHENLALEMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNIKEPKAA 558
Query: 978 INHYIEAGKNNKALDTSIKAKQWKKAVQILQVITNKQDIAQHVKTL--AQHFKTVKDYKT 1035
+ YI AG++ KA++ W V +L I K D A+ L A + K +
Sbjct: 559 VEMYISAGEHVKAIEIC-GDHGW---VDMLIDIARKLDKAEREPLLLCATYLKKLDSPGY 614
Query: 1036 AEKIYSHCDMHEQIVDMYHQTGQWEKAYAIAEQHLNVGEIKATFIQKCKQ-LEEENKFKE 1094
A + Y + +V ++ +T +W++A+A+ E+H E K Q L E ++F+E
Sbjct: 615 AAETYLKMGDLKSLVQLHVETQRWDEAFALGEKH---PEFKDDIYMPYAQWLAENDRFEE 671
Query: 1095 AERLYLIIGEPDLAISMFK 1113
A++ + G A+ + +
Sbjct: 672 AQKAFHKAGRQREAVQVLE 690
Score = 135 (52.6 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 81/361 (22%), Positives = 152/361 (42%)
Query: 1089 ENKFKEAERLYLIIGEPDLAISMFKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESK 1148
+ KF EA +LY G +LA+ M+ + +E + + A K
Sbjct: 494 QGKFHEAAKLYKRSGHENLALEMYTDLCMFEYAKDFLGSGDPKETKMLITKQADWARNIK 553
Query: 1149 NYKQAEKYYLDCNEWKLAIKMYRSLNLWEDAYRIALSNGGQEAV-EPVVYL--WAKSLGG 1205
K A + Y+ E AI++ W D I ++ +A EP++ + K L
Sbjct: 554 EPKAAVEMYISAGEHVKAIEICGDHG-WVDML-IDIARKLDKAEREPLLLCATYLKKLDS 611
Query: 1206 DS-AVRLLNRLSLLESCISNACDTYQFDFAFELAKIGMKSKLEEVHYKYALVLEDNGQFN 1264
A ++ L+S + +T ++D AF L + + K ++++ YA L +N +F
Sbjct: 612 PGYAAETYLKMGDLKSLVQLHVETQRWDEAFALGEKHPEFK-DDIYMPYAQWLAENDRFE 670
Query: 1265 EAETQFIKANKPKEAISMYIHNQDWENAERIANEHDPTSIGDILLNQSKCEFENENFSKF 1324
EA+ F KA + +EA+ + Q NA + +D +L Q C ++ ++
Sbjct: 671 EAQKAFHKAGRQREAVQVL--EQLTNNAVAESRFNDAAYYYWMLSMQ--CLDIAQDPAQK 726
Query: 1325 ETLLLRAHKVDLIIEKYKMNHMWN----DALRVCG-EYVPSKLPLLQQEYEKEINTNISK 1379
+T+L + + + E Y H + D V E + + L K+ + ISK
Sbjct: 727 DTMLGKFYHFQRLAELYHGYHAIHRHTEDPFSVHRPETLFNISRFLLHSLPKDTPSGISK 786
Query: 1380 DIHSLITQARQWEQNGEFYNAVECYLKIKNVDVNLMVKILNEVTQLTLKYLNHDQSYKIL 1439
+ L T A+Q + G + A Y K++ + + + E+ LT++ S +++
Sbjct: 787 -VKILFTLAKQSKALGAYRLARHAYDKLRGLYIPARFQKSIELGTLTIRAKPFHDSEELV 845
Query: 1440 P 1440
P
Sbjct: 846 P 846
Score = 53 (23.7 bits), Expect = 0.00059, Sum P(3) = 0.00059
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 191 YILAAGSDRIVTIYESDG-RVHRIFDYTAPHYKEREFTVACSS-PSGQAVVVGSYD 244
YIL GSD+ V+++ DG R+ + + + + C + P VVVG D
Sbjct: 85 YILLGGSDKQVSLFTKDGVRLGTVGE-------QNSWVWTCQAKPDSNYVVVGCQD 133
Score = 40 (19.1 bits), Expect = 0.00059, Sum P(3) = 0.00059
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 647 HNACVWYNIDTPDRITQFP 665
++ C+ Y+IDT + + Q P
Sbjct: 326 NDTCLVYDIDTKELLFQEP 344
>UNIPROTKB|Q9UG52 [details] [associations]
symbol:DKFZp564L232 "Intraflagellar transport protein 140
homolog" species:9606 "Homo sapiens" [GO:0032391 "photoreceptor
connecting cilium" evidence=IEA] [GO:0035085 "cilium axoneme"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
InterPro:IPR011990 Gene3D:1.25.40.10 GO:GO:0042384 GO:GO:0032391
GO:GO:0035085 EMBL:AL031705 EMBL:Z97652 EMBL:AL031719 EMBL:AL133297
EMBL:Z97633 UniGene:Hs.389438 HGNC:HGNC:29077 ChiTaRS:IFT140
EMBL:AL031720 EMBL:AL080069 IPI:IPI01010093
ProteinModelPortal:Q9UG52 SMR:Q9UG52 STRING:Q9UG52 PRIDE:Q9UG52
Ensembl:ENST00000361339 HOVERGEN:HBG074028 ArrayExpress:Q9UG52
Bgee:Q9UG52 Uniprot:Q9UG52
Length = 656
Score = 126 (49.4 bits), Expect = 0.00069, P = 0.00069
Identities = 98/510 (19%), Positives = 197/510 (38%)
Query: 1002 KAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEKIYSHCDMHEQIVDMYHQTGQWEK 1061
+ + L+ + ++ V LA ++D AE++Y C H+ + Y G+W++
Sbjct: 25 RGARALREAEQEPELEARVAVLATQLGMLED---AEQLYRKCKRHDLLNKFYQAAGRWQE 81
Query: 1062 AYAIAEQHLNVGEIKATFIQKCKQLEEENKFKEAERLY-----------LIIGEPDLAIS 1110
A +AE H V +++T+ + LE A Y ++ E ++
Sbjct: 82 ALQVAEHHDRV-HLRSTYHRYAGHLEASADCSRALSYYEKSDTHRFEVPRMLSEDLPSLE 140
Query: 1111 MFKNQRQYENMIKLVRNYXXXXXXXXXXXXAQECEESKNYKQAEKYYLDCNEWKLAIKMY 1170
++ N+ + + + + Y E ++ + N K A
Sbjct: 141 LYVNKMKDKTLWRWWAQYLESQGEMDAALHYYELARD-HFSLVRIHCFQGNVQKAAQIAN 199
Query: 1171 RSLNLWEDAYRIALSNGGQEAVEPVVYLWAKSLGGDSAVRLLNRLSLLESCISNACDTYQ 1230
+ NL +Y +A QE V V+ + ++ +A+RL C N D
Sbjct: 200 ETGNL-AASYHLARQYESQEEVGQAVHFYTRAQAFKNAIRL---------CKENGLDD-- 247
Query: 1231 FDFAFELAKIGMKSKLEEVHYKYALVLEDNG-QFNEAETQFIKANKPKEAISMYIHNQDW 1289
+L + + S E++ + A E+ G Q + A + KA +A+ + Q +
Sbjct: 248 -----QLMNLALLSSPEDM-IEAARYYEEKGVQMDRAVMLYHKAGHFSKALELAFATQQF 301
Query: 1290 ENAERIANEHDPTSIGDILLNQSKCEFENENFSKFETLLLRAHK----VDLII-EKYKMN 1344
+ IA + D TS +L S E+ + + LLL A K + L + + +
Sbjct: 302 VALQLIAEDLDETSDPALLARCSDFFIEHSQYERAVELLLAARKYQEALQLCLGQNMSIT 361
Query: 1345 HMWNDALRVCGEYVPSKLPLLQQEYEKEINTNIS-----KDIHSLITQARQWEQNGEFYN 1399
+ + V + S LP +E +E+ I+ + + L T +++ Q G
Sbjct: 362 EEMAEKMTVAKD--SSDLP---EESRRELLEQIADCCMRQGSYHLAT--KKYTQAGNKLK 414
Query: 1400 AVECYLKIKNVDVNLMVKILNEVTQLTLKYLNHDQS--YKILPSLVPKLMEFKQYDLAVR 1457
A+ LK + + ++ ++ + N+ QS ++ P ++ ++ F A+
Sbjct: 415 AMRALLKSGDTEKITFFASVSRQKEIYIMAANYLQSLDWRKEPEIMKNIIGFYTKGRALD 474
Query: 1458 VYLNIDMVKEAVDIFIYTQNWNKARKLCAE 1487
+ V+I Y QN++KA E
Sbjct: 475 LLAGFYDACAQVEIDEY-QNYDKAHGALTE 503
>MGI|MGI:1096573 [details] [associations]
symbol:Cirh1a "cirrhosis, autosomal recessive 1A (human)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1096573 GO:GO:0005730
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006351 KO:K14548 CTD:84916 HOVERGEN:HBG050963
OMA:WSRTVQK OrthoDB:EOG4JQ3X0 ChiTaRS:CIRH1A EMBL:AK173318
EMBL:BC018262 EMBL:BC027399 EMBL:BC068113 EMBL:X80433 EMBL:X80434
IPI:IPI00331601 PIR:S46930 RefSeq:NP_035704.2 UniGene:Mm.10665
ProteinModelPortal:Q8R2N2 SMR:Q8R2N2 IntAct:Q8R2N2 STRING:Q8R2N2
PhosphoSite:Q8R2N2 PaxDb:Q8R2N2 PRIDE:Q8R2N2
Ensembl:ENSMUST00000047629 GeneID:21771 KEGG:mmu:21771
UCSC:uc009ngr.2 GeneTree:ENSGT00390000008662 HOGENOM:HOG000095656
InParanoid:Q8R2N2 NextBio:301108 Bgee:Q8R2N2 CleanEx:MM_CIRH1A
Genevestigator:Q8R2N2 GermOnline:ENSMUSG00000041438 Uniprot:Q8R2N2
Length = 686
Score = 126 (49.4 bits), Expect = 0.00074, P = 0.00074
Identities = 48/178 (26%), Positives = 89/178 (50%)
Query: 46 SYVVKGL---AFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKFIQQCPVTTMVWLA 102
+YV G+ A++ S +LAV+++D + IY L ++ +K + + W A
Sbjct: 13 NYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGH--ESRGTEALCW-A 69
Query: 103 DGPIIYGQS-DGKIKAAHVKA-NKTQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRYY 160
G ++ +G+I ++A N TL A + ++ + G+ +L G DGS+ +
Sbjct: 70 GGQRLFSAGLNGEILEYDLQALNIKYTLDAFGGPIWSMTASPSGSQLLVGCEDGSVKLFE 129
Query: 161 VTED----ASNFDQQQGRVVQHPVPPYALSW-PAGYILAAGSDRIVTIYE-SDGRVHR 212
VT + A NFD+Q+ R++ +L W PAG +AAGS +++++ G + R
Sbjct: 130 VTPEKIQFARNFDRQKSRIL-------SLCWHPAGTHVAAGSLDYISVFDVKSGSIIR 180
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 123 (48.4 bits), Expect = 0.00092, P = 0.00092
Identities = 69/255 (27%), Positives = 110/255 (43%)
Query: 43 GRKSYVVKGLAFSPDSTKLAVAQSDNIIFIYKLGDDWGDKKVICNKF-IQQCPVTTMVWL 101
G K VV L FSP LA A D + ++ L D+K ++F PV ++ +
Sbjct: 58 GHKD-VVTSLQFSPQGNLLASASRDKTVRLWVL-----DRKGKSSEFKAHTAPVRSVDFS 111
Query: 102 ADGPIIYGQSDGK-IKAAHVKANK-TQTLYASNSFVVALCLNVRGAGVLSGHADGSIVRY 159
ADG + S+ K IK + + +LY +V + G ++S D +I +
Sbjct: 112 ADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
Query: 160 YVTED--ASNFDQQQGRVVQHPVPPYALSWPAGYILA-AGSDRIVTIYESDGRVHRIFDY 216
T +NF G + P G +A AGSD V I+ D R++R+
Sbjct: 172 DTTSKQCVNNFSDSVG------FANFVDFSPNGTCIASAGSDHAVRIW--DIRMNRLLQ- 222
Query: 217 TAPHYKEREFTVACSS--PSGQAVVVGSYDN-IKLFAWSPSKSVWEEQPNKTIPNLYTIS 273
HY+ V C S PSG ++V S D +K+ + ++ Q + T P ++T+S
Sbjct: 223 ---HYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGH-TGP-VFTVS 277
Query: 274 ALSWKRDGSRIACGG 288
+ +DG GG
Sbjct: 278 ---FSKDGELFTSGG 289
>GENEDB_PFALCIPARUM|PF14_0675 [details] [associations]
symbol:PF14_0675 "reticulocyte binding protein
2 homolog B, putative" species:5833 "Plasmodium falciparum"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014187 GenomeReviews:AE014187_GR
RefSeq:XP_001348849.1 ProteinModelPortal:Q8IKD0
EnsemblProtists:PF14_0675:mRNA GeneID:812257 KEGG:pfa:PF14_0675
EuPathDB:PlasmoDB:PF3D7_1470800 HOGENOM:HOG000281879
ProtClustDB:CLSZ2433587 Uniprot:Q8IKD0
Length = 1095
Score = 113 (44.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 85/352 (24%), Positives = 153/352 (43%)
Query: 1298 EHDPTSIGDILL----NQSKCEFENE-NFSK------FETLLLRAHKVDLIIEKYKMN-H 1345
+H+ +GDI N + N N S + T + ++ KYK H
Sbjct: 607 DHENLKVGDIFFCRFENVKRQSIRNVFNLSNSAIINIYNTFFKKDKDSYIVPSKYKEEQH 666
Query: 1346 MWNDALRVCGEYVPSKLPLLQQEYEKEINTNIS---KDIHSL--ITQARQWEQNG----E 1396
M +D ++ + K QQ+ +K+I N S +DI+ + I Q + N E
Sbjct: 667 MLHDEIK---QKETKKQQQQQQQKKKKIYINSSSTNEDINIVNNIDTKNQEDGNQKSTTE 723
Query: 1397 FYNA-VECY----LKIKNVDVNLMVKILNEVTQLTLKYLNHDQSYKILPSLVPKLMEFKQ 1451
+ N + + L + D+ M L++ T+ L N D+++K+L ++ +
Sbjct: 724 YVNKNINQHTFEELFFEKYDIYFMKAELHKDTEYRLNKNNIDKNFKLLKNICDNYLS--G 781
Query: 1452 YDLAVRVYLNIDMVKEAVDIFIYTQNWNKARKLCAELKPEYLSYVENQYKEWLKKNGDAD 1511
++ + Y+N ++E +I T + K+ ++ +Y S EN YKE L+ +
Sbjct: 782 FN---KSYVNYSSIREH---YILTYLGEENYKIYRQIVSDYFSSNENSYKELLQTDCQEL 835
Query: 1512 MLSEIDINTALD----MLMKQGQ-WNQCL-DKAKNINTNLLHKYMALYAMHLIKNKEYAQ 1565
+ S DI ALD + ++ Q +N+ L DK +N N L+ Y+ L + +KN+ Y
Sbjct: 836 LTSIFDI--ALDKPNELNIENIQNFNKLLWDKVNKLNVNELN-YV-LQDLKKLKNRLYIY 891
Query: 1566 LTQLFNEYGTPNIPQFYNIYKQTAY-CILN-DSNENVN--LIISLRNMLFNV 1613
N+ G N+ N K ILN + N+N+ L+ +N F +
Sbjct: 892 PCSYDNQIGRMNL--ILNNQKPIKKEHILNLNVNDNIKELLLKEYKNFTFPI 941
Score = 68 (29.0 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 39/172 (22%), Positives = 78/172 (45%)
Query: 897 LENHDVVSQIVKGLIKNESYIKAGQI-YEF----TNENEKALECYRKGKVYDKCIDLTRK 951
+++H++++ + +++N Y+K I +EF TN ++ + KG + I+
Sbjct: 357 IKSHNIIN--TRNILRNFDYLKNKVITHEFNKYFTNMDDLIHQNVAKGNINKNLINQEIY 414
Query: 952 INPKNVTALEEEWGDHLIENKQYNAAINHYIEAG---KN--NKALDTSIKAKQWK----- 1001
KN+ + E+ + +H N N+ +N + KN K D K KQ+K
Sbjct: 415 AKEKNIQSNEKNYNNHDNSN-DINSNVNKSNDNSSSYKNIAKKKKDYIEKFKQFKDQYYG 473
Query: 1002 -KAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEK-IYSHCDMHEQIVD 1051
K V L+ I I + K L + + + KT ++ +Y +H +I++
Sbjct: 474 CKDVDALKYINVDDYIYKREKLL--YVRIIN--KTLDRNVYEGSMVHSEIIN 521
>UNIPROTKB|Q8IKD0 [details] [associations]
symbol:Rh2b "Reticulocyte binding protein 2 homolog B,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE014187 GenomeReviews:AE014187_GR RefSeq:XP_001348849.1
ProteinModelPortal:Q8IKD0 EnsemblProtists:PF14_0675:mRNA
GeneID:812257 KEGG:pfa:PF14_0675 EuPathDB:PlasmoDB:PF3D7_1470800
HOGENOM:HOG000281879 ProtClustDB:CLSZ2433587 Uniprot:Q8IKD0
Length = 1095
Score = 113 (44.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 85/352 (24%), Positives = 153/352 (43%)
Query: 1298 EHDPTSIGDILL----NQSKCEFENE-NFSK------FETLLLRAHKVDLIIEKYKMN-H 1345
+H+ +GDI N + N N S + T + ++ KYK H
Sbjct: 607 DHENLKVGDIFFCRFENVKRQSIRNVFNLSNSAIINIYNTFFKKDKDSYIVPSKYKEEQH 666
Query: 1346 MWNDALRVCGEYVPSKLPLLQQEYEKEINTNIS---KDIHSL--ITQARQWEQNG----E 1396
M +D ++ + K QQ+ +K+I N S +DI+ + I Q + N E
Sbjct: 667 MLHDEIK---QKETKKQQQQQQQKKKKIYINSSSTNEDINIVNNIDTKNQEDGNQKSTTE 723
Query: 1397 FYNA-VECY----LKIKNVDVNLMVKILNEVTQLTLKYLNHDQSYKILPSLVPKLMEFKQ 1451
+ N + + L + D+ M L++ T+ L N D+++K+L ++ +
Sbjct: 724 YVNKNINQHTFEELFFEKYDIYFMKAELHKDTEYRLNKNNIDKNFKLLKNICDNYLS--G 781
Query: 1452 YDLAVRVYLNIDMVKEAVDIFIYTQNWNKARKLCAELKPEYLSYVENQYKEWLKKNGDAD 1511
++ + Y+N ++E +I T + K+ ++ +Y S EN YKE L+ +
Sbjct: 782 FN---KSYVNYSSIREH---YILTYLGEENYKIYRQIVSDYFSSNENSYKELLQTDCQEL 835
Query: 1512 MLSEIDINTALD----MLMKQGQ-WNQCL-DKAKNINTNLLHKYMALYAMHLIKNKEYAQ 1565
+ S DI ALD + ++ Q +N+ L DK +N N L+ Y+ L + +KN+ Y
Sbjct: 836 LTSIFDI--ALDKPNELNIENIQNFNKLLWDKVNKLNVNELN-YV-LQDLKKLKNRLYIY 891
Query: 1566 LTQLFNEYGTPNIPQFYNIYKQTAY-CILN-DSNENVN--LIISLRNMLFNV 1613
N+ G N+ N K ILN + N+N+ L+ +N F +
Sbjct: 892 PCSYDNQIGRMNL--ILNNQKPIKKEHILNLNVNDNIKELLLKEYKNFTFPI 941
Score = 68 (29.0 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 39/172 (22%), Positives = 78/172 (45%)
Query: 897 LENHDVVSQIVKGLIKNESYIKAGQI-YEF----TNENEKALECYRKGKVYDKCIDLTRK 951
+++H++++ + +++N Y+K I +EF TN ++ + KG + I+
Sbjct: 357 IKSHNIIN--TRNILRNFDYLKNKVITHEFNKYFTNMDDLIHQNVAKGNINKNLINQEIY 414
Query: 952 INPKNVTALEEEWGDHLIENKQYNAAINHYIEAG---KN--NKALDTSIKAKQWK----- 1001
KN+ + E+ + +H N N+ +N + KN K D K KQ+K
Sbjct: 415 AKEKNIQSNEKNYNNHDNSN-DINSNVNKSNDNSSSYKNIAKKKKDYIEKFKQFKDQYYG 473
Query: 1002 -KAVQILQVITNKQDIAQHVKTLAQHFKTVKDYKTAEK-IYSHCDMHEQIVD 1051
K V L+ I I + K L + + + KT ++ +Y +H +I++
Sbjct: 474 CKDVDALKYINVDDYIYKREKLL--YVRIIN--KTLDRNVYEGSMVHSEIIN 521
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1637 1625 0.00084 125 3 11 22 0.41 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 637 (68 KB)
Total size of DFA: 782 KB (2328 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 158.75u 0.09s 158.84t Elapsed: 00:00:44
Total cpu time: 158.80u 0.10s 158.90t Elapsed: 00:00:44
Start: Thu Aug 15 11:17:25 2013 End: Thu Aug 15 11:18:09 2013